Rroxscaffold_3G00266010

ADP-ribosylation factor GTPase-activating protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0011770
Physical Location & Seq
Reverse (-)
59393112 .. 59401584
8473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00266010.1

Sequence Viewer

Length: 2220 bp
ATGACTTTCGCAAAGCTCGATGATTCGCCAATGTTCCGCCAGCAGTTGCAAGGCTTGGAAGAAGGGGCAGAGGCATTGAGGGGAAGGTGTTCTAAGTTTTACAAAGGATGTCGAAAGTACACAGAAGGGCTTGGAGAAGCATACGATGGGGAAATTGCTTTTGTAACTGCCCTTGAAACTTTTGGGGGAGGGCATGGTGATCCTATTTTTTCAGCAATGGGGGGCCATATCATGACGAATTTCACAATTGCATTGAGAGAAATAGGAACATACAAGGAAGTTTTGCGGTCACAGGTAGAGCACATGCTAAATGATAGGCTGCTGCAATTTGTAAATGTTGACCTCCAAGATCTCAAGGAAGTCAGAAAGCGTTTCGACAAGGCTTCACTTATATATGATCAGGCACGTGAGAAGTTTCTGTCATTGAGGAAGAGCACTAGGCTGGATATAGCTGCTAGTATAGAGGAGGAACTGAATAATGCAAGATCCTCATTTGAGCAAGCCCGCTTCAACCTGGAAGCTGTTAGTGGGGTGATGGATGCTCATCTTCGTTTCTTCAAACAGGGATATGAGCTACTGCACACAATGGAACCCTATATCCATCAGGTTTTGGAGTATGCACAACATACGAGAGAAAGTGCCAACCAGGAACAGATATCGCTTAATGAAAGAATAGTAGAGTACAGAAGGCAGATTGATAGGGAAAGTAGGCAGTCCTTACGTGGTGTTCATGGTTCTTTTAGTGGAGATGGTATGCAGACTTTGGCTAGAAGATCAAATAAACTGATAGAGGAAGTGATGCAATCTGCTGCAAAGGGGAAGTCTTCTCCACAGAAGAATAATTCCTCCGACTATGGCTCTGGGATTTTGAGTCGATGGCTTTCCTCCCACTACCATGGTGGTGTGCATGATGAAAAATCGGTTGCACGTCACACTGTGAACTTGCTGACATCAACAATTAAGGTTGATGCAGACCAGACAGACTTAAGATTCTGCTTCAGGATTATATCACCTTTGAAAATTTACACTTTGCAGGCAGAGAATGCACTCGACCAAATGGATTGGATTGAGAAAATCACTGGAGTAATTTCTTCATTATTGAGTTTCCAGGCACCTGAGAGGCGTCTGCTAGCTAGCTCTATGGGTAGTGACGATCATTTCTCTGCAAGCGAGAGCAATTCATTAGAAAGTTATCCTGATGTTGATCAGACCGCTATTCAGGACCAGTCACCAAAAATCTTCACTAATAATTATTTGCGTACCTATAGAAGTTTGCAACCGCATAAGCCGAGTGTGAAAACTGAGAAGCCAATTGAGATATTGAGAAGAGTACGTGGTAATGACAAGTGTGCTGATTGTGGGGCACCTGACCCAGATTGGGCATCCTTAAACCTTGGTATTCTTATTTGCATCGAATGTTCTGGTGTTCATCGCAATCTTGGTGTTAGATCACTGACACTTGATGTGAAAGTATGGGAACCGTCTGTCTTAATCTTGTTTCAATCTCTGGGGAATACTTATGCAAACTCGATTTGGGAGGAGATGCTGCCTTCAAAAAGTACTTCACAGGTTGATGATATTCTTACTGGTTTTTTCAAGTCTGATAAAAATTCAATTGATCAATCTCTTATGACAAAGCCCTGTTATGATGATCTGATTTCAGTAAAGGAGAGATTTATTCAAGCAAAGTATGCAGAAAAACGTTTTGTTCGCCCCAGAAAGATCAGTCAGAAACTCCACCCTGTGGAGCAACAGTTGTGGAAAAGTGTCTGTACTAATGACAAGCAAGCTGTTTACCGCTATATTGTCAGCTTTGAAGCTGATATTAATGCTGTATGTGGGAAAGCATTATGTGATAATTCAATGGACAAGCCTTCCTCAAGTAATTCAAATTTATCAAGTAGAAGTGAAGATCGCCTCATAGAAAGCATCCCTGAGGGTTGTTCCCTGCTTCACCTAGCCTGCCAAATTGCTGATATTGGCATGGTGGAGCTACTTTTACAGTATGGTGCAAATATAAATGCTTCTGATTCAAAAGGCCAAACGCCACTCCATTATTGTGTTATGAGAGGGAATCCTGCTATTACAAAGATGCTTCTCATGAGAGGAGCAGATCCTCAGGCCACTGACAGAGAAGGTAAAACACCATGTAAGCTTGTATCAGAGTCAGCCTTGAATGACAATGGGATGCTTTCTATGCTGACAAACTCAGGCAGATGA

Protein Analysis

739

Amino Acids

83.17

Weight (kDa)

6.44

Isoelectric Point (pI)

47.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAR_3 PF16746 6 - 218 1.2e-24 BAR domain of APPL family
BAR PF03114 64 - 174 1.2e-07 BAR domain
ArfGap PF01412 437 - 522 7.3e-26 Putative GTPase activating protein for Arf
Ank_2 PF12796 643 - 710 9.8e-13 Ankyrin repeats (3 copies)
Ank PF00023 647 - 677 3.1e-06 Ankyrin repeat
Ank_4 PF13637 651 - 700 2.4e-10 Ankyrin repeats (many copies)
Ank_5 PF13857 666 - 716 2.7e-08 Ankyrin repeats (many copies)
Ank PF00023 680 - 711 1.8e-07 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011770)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G61980
fragaria_vesca FvH4_5g09370 FvH4_5g09370 FvH4_5g09370
malus_domestica MD06G1131800.v1.1 MD14G1148100.v1.1
prunus_persica Prupe.5G142800_v2.0.a1
pyrus_communis pycom06g12340 pycom14g12290
rosa_chinensis RchiOBHm_Chr7g0188801
rosa_laevigata RLG00000004658
rosa_multiflora Rmu_sc0003642.1_g000001
rosa_roxburghii Rroxscaffold_3G00266010
rosa_rugosa Rorug06G0494100
rosa_samantha Rh7AG098800 Rh7BG100500 Rh7CG102000 Rh7DG100600
rosa_wichuraiana Rw7G008510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1111, 1363
AccB7I CCANNNNNTGG 1 cut(s) 1744
AciI CCGC 6 cut(s) 37, 286, 505, 1212, 1280, 1798
AclI AACGTT 1 cut(s) 1702
AclWI GGATC 3 cut(s) 194, 480, 2108
AcsI RAATTY 4 cut(s) 238, 1020, 1609, 1891
AcuI CTGAAG 1 cut(s) 982
AcvI CACGTG 1 cut(s) 407
AcyI GRCGYC 1 cut(s) 1123
AdeI CACNNNGTG 2 cut(s) 937, 1744
AfaI GTAC 6 cut(s) 119, 683, 1261, 1332, 1561, 1774
AfiI CCNNNNNNNGG 2 cut(s) 1378, 1744
AflII CTTAAG 1 cut(s) 985
AjiI CACGTC 1 cut(s) 929
AjnI CCWGG 3 cut(s) 513, 645, 1107
AloI GAACNNNNNNTCC 2 cut(s) 582, 614
Alw21I GWGCWC 2 cut(s) 303, 437
AlwI GGATC 3 cut(s) 194, 480, 2108
AoxI GGCC 3 cut(s) 223, 2038, 2121
ApeKI GCWGC 5 cut(s) 319, 322, 452, 809, 1546
ApoI RAATTY 4 cut(s) 238, 1020, 1609, 1891
ArsI GACNNNNNNTTYG 2 cut(s) 806, 838
AseI ATTAAT 1 cut(s) 1827
Asp700I GAANNNNTTC 1 cut(s) 88
AspS9I GGNCC 2 cut(s) 223, 1222
AsuHPI GGTGA 5 cut(s) 209, 544, 1002, 1221, 1946
AsuNHI GCTAGC 2 cut(s) 1129, 1133
AvaII GGWCC 1 cut(s) 1222
AxyI CCTNAGG 2 cut(s) 1935, 2118
BaeGI GKGCMC 1 cut(s) 1366
BanI GGYRCC 2 cut(s) 1111, 1363
BbrPI CACGTG 1 cut(s) 407
BbsI GAAGAC 1 cut(s) 816
Bbv12I GWGCWC 2 cut(s) 303, 437
BbvI GCAGC 5 cut(s) 306, 309, 439, 796, 1533
BccI CCATC 5 cut(s) 140, 529, 609, 743, 870
BciT130I CCWGG 3 cut(s) 515, 647, 1109
BclI TGATCA 3 cut(s) 397, 1204, 1618
BfaI CTAG 6 cut(s) 438, 456, 768, 1130, 1134, 1958
BfmI CTRYAG 1 cut(s) 1264
BfrI CTTAAG 1 cut(s) 985
BglII AGATCT 1 cut(s) 349
BisI GCNGC 5 cut(s) 320, 323, 453, 810, 1547
BlsI GCNGC 5 cut(s) 321, 324, 454, 811, 1548
BmcAI AGTACT 1 cut(s) 1561
Bme1390I CCNGG 3 cut(s) 515, 647, 1109
Bme18I GGWCC 1 cut(s) 1222
BmgBI CACGTC 1 cut(s) 929
BmgT120I GGNCC 2 cut(s) 223, 1222
BmiI GGNNCC 5 cut(s) 224, 591, 1113, 1365, 1479
BmrFI CCNGG 3 cut(s) 515, 647, 1109
BmsI GCATC 9 cut(s) 529, 789, 958, 1391, 1419, 1533, 1938, 2082, 2178
BmtI GCTAGC 2 cut(s) 1133, 1137
BpiI GAAGAC 1 cut(s) 816
BpmI CTGGAG 1 cut(s) 1101
BpuEI CTTGAG 2 cut(s) 338, 1864
BsaAI YACGTR 3 cut(s) 407, 722, 1334
BsaBI GATNNNNATC 2 cut(s) 543, 1203
BsaHI GRCGYC 1 cut(s) 1123
BsaJI CCNNGG 2 cut(s) 895, 1393
BsaXI ACNNNNNCTCC 2 cut(s) 1739, 1769
Bsc4I CCNNNNNNNGG 2 cut(s) 1378, 1744
Bse1I ACTGG 3 cut(s) 1084, 1225, 1591
Bse21I CCTNAGG 2 cut(s) 1935, 2118
Bse3DI GCAATG 1 cut(s) 222
Bse8I GATNNNNATC 2 cut(s) 543, 1203
BseBI CCWGG 3 cut(s) 515, 647, 1109
BseDI CCNNGG 2 cut(s) 895, 1393
BseGI GGATG 5 cut(s) 113, 544, 1382, 1929, 2193
BseJI GATNNNNATC 2 cut(s) 543, 1203
BseLI CCNNNNNNNGG 2 cut(s) 1378, 1744
BseMI GCAATG 1 cut(s) 222
BseMII CTCAG 4 cut(s) 1107, 1293, 1926, 2132
BseNI ACTGG 3 cut(s) 1084, 1225, 1591
BseRI GAGGAG 3 cut(s) 479, 1553, 2121
BseSI GKGCMC 1 cut(s) 1366
BseXI GCAGC 5 cut(s) 306, 309, 439, 796, 1533
BsgI GTGCAG 1 cut(s) 563
BshFI GGCC 3 cut(s) 225, 2040, 2123
BshNI GGYRCC 2 cut(s) 1111, 1363
BsiHKAI GWGCWC 2 cut(s) 303, 437
BslI CCNNNNNNNGG 2 cut(s) 1378, 1744
BsmI GAATGC 1 cut(s) 1048
BsnI GGCC 3 cut(s) 225, 2040, 2123
Bsp1286I GDGCHC 3 cut(s) 303, 437, 1366
Bsp19I CCATGG 1 cut(s) 895
BspACI CCGC 6 cut(s) 37, 286, 505, 1212, 1280, 1798
BspANI GGCC 3 cut(s) 225, 2040, 2123
BspCNI CTCAG 4 cut(s) 1108, 1294, 1927, 2131
BspHI TCATGA 2 cut(s) 231, 2100
BspLI GGNNCC 5 cut(s) 224, 591, 1113, 1365, 1479
BspOI GCTAGC 2 cut(s) 1133, 1137
BspPI GGATC 3 cut(s) 194, 480, 2108
BspQI GCTCTTC 1 cut(s) 425
BspT107I GGYRCC 2 cut(s) 1111, 1363
BspTI CTTAAG 1 cut(s) 985
BsrDI GCAATG 1 cut(s) 222
BsrI ACTGG 3 cut(s) 1084, 1225, 1591
BssECI CCNNGG 2 cut(s) 895, 1393
BssNI GRCGYC 1 cut(s) 1123
BssT1I CCWWGG 2 cut(s) 895, 1393
Bst2UI CCWGG 3 cut(s) 515, 647, 1109
Bst4CI ACNGT 4 cut(s) 937, 1482, 1755, 2004
Bst6I CTCTTC 2 cut(s) 425, 1321
BstACI GRCGYC 1 cut(s) 1123
BstAFI CTTAAG 1 cut(s) 985
BstAPI GCANNNNNTGC 2 cut(s) 1043, 1691
BstBAI YACGTR 3 cut(s) 407, 722, 1334
BstC8I GCNNGC 9 cut(s) 41, 501, 505, 1035, 1131, 1135, 1168, 1788, 1963
BstDEI CTNAG 6 cut(s) 93, 1116, 1302, 1935, 2118, 2209
BstDSI CCRYGG 1 cut(s) 895
BstF5I GGATG 5 cut(s) 113, 544, 1382, 1929, 2193
BstMWI GCNNNNNNNGC 3 cut(s) 1043, 1691, 2197
BstNI CCWGG 3 cut(s) 515, 647, 1109
BstNSI RCATGY 1 cut(s) 307
BstSCI CCNGG 3 cut(s) 513, 645, 1107
BstSFI CTRYAG 1 cut(s) 1264
BstSLI GKGCMC 1 cut(s) 1366
BstV1I GCAGC 5 cut(s) 306, 309, 439, 796, 1533
BstV2I GAAGAC 1 cut(s) 816
BstX2I RGATCY 3 cut(s) 349, 485, 2113
BstXI CCANNNNNNTGG 1 cut(s) 896
BstYI RGATCY 3 cut(s) 349, 485, 2113
Bsu36I CCTNAGG 2 cut(s) 1935, 2118
BsuRI GGCC 3 cut(s) 225, 2040, 2123
BtgI CCRYGG 1 cut(s) 895
BtgZI GCGATG 1 cut(s) 1415
BtrI CACGTC 1 cut(s) 929
BtsCI GGATG 5 cut(s) 113, 544, 1382, 1929, 2193
BtsIMutI CAGTG 4 cut(s) 933, 1077, 1451, 2124
Cac8I GCNNGC 9 cut(s) 41, 501, 505, 1035, 1131, 1135, 1168, 1788, 1963
CciI TCATGA 2 cut(s) 231, 2100
Cfr13I GGNCC 2 cut(s) 223, 1222
CseI GACGC 1 cut(s) 1112
Csp6I GTAC 6 cut(s) 118, 682, 1260, 1331, 1560, 1773
CspCI CAANNNNNGTGG 2 cut(s) 1739, 1774
CviAII CATG 9 cut(s) 194, 232, 304, 731, 896, 908, 1984, 2101, 2148
CviQI GTAC 6 cut(s) 118, 682, 1260, 1331, 1560, 1773
DdeI CTNAG 6 cut(s) 93, 1116, 1302, 1935, 2118, 2209
DraIII CACNNNGTG 2 cut(s) 937, 1744
Eam1104I CTCTTC 2 cut(s) 425, 1321
EarI CTCTTC 2 cut(s) 425, 1321
EciI GGCGGA 1 cut(s) 26
Eco130I CCWWGG 2 cut(s) 895, 1393
Eco32I GATATC 1 cut(s) 657
Eco47I GGWCC 1 cut(s) 1222
Eco57I CTGAAG 1 cut(s) 982
Eco72I CACGTG 1 cut(s) 407
Eco81I CCTNAGG 2 cut(s) 1935, 2118
EcoRII CCWGG 3 cut(s) 513, 645, 1107
EcoRV GATATC 1 cut(s) 657
EcoT14I CCWWGG 2 cut(s) 895, 1393
ErhI CCWWGG 2 cut(s) 895, 1393
FaeI CATG 9 cut(s) 197, 235, 307, 734, 899, 911, 1987, 2104, 2151
FatI CATG 9 cut(s) 193, 231, 303, 730, 895, 907, 1983, 2100, 2147
FauI CCCGC 1 cut(s) 512
FbaI TGATCA 3 cut(s) 397, 1204, 1618
Fnu4HI GCNGC 5 cut(s) 320, 323, 453, 810, 1547
FokI GGATG 5 cut(s) 120, 551, 1369, 1916, 2200
Fsp4HI GCNGC 5 cut(s) 320, 323, 453, 810, 1547
FspBI CTAG 6 cut(s) 438, 456, 768, 1130, 1134, 1958
GluI GCNGC 5 cut(s) 320, 323, 453, 810, 1547
GsuI CTGGAG 1 cut(s) 1101
HaeIII GGCC 3 cut(s) 225, 2040, 2123
HgaI GACGC 1 cut(s) 1112
Hin1I GRCGYC 1 cut(s) 1123
Hin1II CATG 9 cut(s) 197, 235, 307, 734, 899, 911, 1987, 2104, 2151
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HindIII AAGCTT 1 cut(s) 2153
HinfI GANTC 6 cut(s) 23, 871, 990, 2030, 2074, 2165
HphI GGTGA 5 cut(s) 209, 544, 1002, 1221, 1946
Hpy166II GTNNAC 4 cut(s) 120, 340, 940, 1795
Hpy188I TCNGA 8 cut(s) 365, 850, 1209, 1603, 1656, 1731, 2029, 2164
Hpy188III TCNNGA 5 cut(s) 232, 1000, 1196, 1220, 2101
Hpy8I GTNNAC 4 cut(s) 120, 340, 940, 1795
HpyAV CCTTC 7 cut(s) 56, 78, 119, 681, 1560, 1884, 2129
HpyCH4III ACNGT 4 cut(s) 937, 1482, 1755, 2004
HpyCH4IV ACGT 5 cut(s) 406, 721, 928, 1333, 1702
HpyF10VI GCNNNNNNNGC 3 cut(s) 1043, 1691, 2197
HpyF3I CTNAG 6 cut(s) 93, 1116, 1302, 1935, 2118, 2209
HpySE526I ACGT 5 cut(s) 406, 721, 928, 1333, 1702
Hsp92I GRCGYC 1 cut(s) 1123
Hsp92II CATG 9 cut(s) 197, 235, 307, 734, 899, 911, 1987, 2104, 2151
Ksp22I TGATCA 3 cut(s) 397, 1204, 1618
LguI GCTCTTC 1 cut(s) 425
LmnI GCTCC 3 cut(s) 1747, 1990, 2108
Lsp1109I GCAGC 5 cut(s) 306, 309, 439, 796, 1533
LweI GCATC 9 cut(s) 529, 789, 958, 1391, 1419, 1533, 1938, 2082, 2178
MaeI CTAG 6 cut(s) 438, 456, 768, 1130, 1134, 1958
MaeII ACGT 5 cut(s) 406, 721, 928, 1333, 1702
MaeIII GTNAC 5 cut(s) 163, 288, 929, 1148, 1227
MfeI CAATTG 3 cut(s) 246, 1311, 1614
MflI RGATCY 3 cut(s) 349, 485, 2113
MhlI GDGCHC 3 cut(s) 303, 437, 1366
MlyI GAGTC 2 cut(s) 880, 2174
MmeI TCCRAC 1 cut(s) 873
MroXI GAANNNNTTC 1 cut(s) 88
MseI TTAA 6 cut(s) 663, 960, 986, 1388, 1490, 1827
MslI CAYNNNNRTG 3 cut(s) 894, 900, 2058
MspCI CTTAAG 1 cut(s) 985
MspR9I CCNGG 3 cut(s) 515, 647, 1109
MunI CAATTG 3 cut(s) 246, 1311, 1614
Mva1269I GAATGC 1 cut(s) 1048
MvaI CCWGG 3 cut(s) 515, 647, 1109
MwoI GCNNNNNNNGC 3 cut(s) 1043, 1691, 2197
NcoI CCATGG 1 cut(s) 895
NheI GCTAGC 2 cut(s) 1129, 1133
NlaIII CATG 9 cut(s) 197, 235, 307, 734, 899, 911, 1987, 2104, 2151
NlaIV GGNNCC 5 cut(s) 224, 591, 1113, 1365, 1479
NmeAIII GCCGAG 1 cut(s) 1314
NmuCI GTSAC 4 cut(s) 288, 929, 1148, 1227
NspI RCATGY 1 cut(s) 307
PagI TCATGA 2 cut(s) 231, 2100
PciSI GCTCTTC 1 cut(s) 425
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PctI GAATGC 1 cut(s) 1048
PdmI GAANNNNTTC 1 cut(s) 88
PfeI GAWTC 4 cut(s) 23, 990, 2030, 2074
PflMI CCANNNNNTGG 1 cut(s) 1744
PkrI GCNGC 5 cut(s) 321, 324, 454, 811, 1548
PleI GAGTC 2 cut(s) 879, 2173
PmaCI CACGTG 1 cut(s) 407
PmlI CACGTG 1 cut(s) 407
PpsI GAGTC 2 cut(s) 879, 2173
Ppu21I YACGTR 3 cut(s) 407, 722, 1334
PshBI ATTAAT 1 cut(s) 1827
Psp1406I AACGTT 1 cut(s) 1702
Psp6I CCWGG 3 cut(s) 513, 645, 1107
PspCI CACGTG 1 cut(s) 407
PspGI CCWGG 3 cut(s) 513, 645, 1107
PspN4I GGNNCC 5 cut(s) 224, 591, 1113, 1365, 1479
PspPI GGNCC 2 cut(s) 223, 1222
PsuI RGATCY 3 cut(s) 349, 485, 2113
RsaI GTAC 6 cut(s) 119, 683, 1261, 1332, 1561, 1774
RsaNI GTAC 6 cut(s) 118, 682, 1260, 1331, 1560, 1773
RseI CAYNNNNRTG 3 cut(s) 894, 900, 2058
SapI GCTCTTC 1 cut(s) 425
SaqAI TTAA 6 cut(s) 663, 960, 986, 1388, 1490, 1827
SatI GCNGC 5 cut(s) 320, 323, 453, 810, 1547
Sau96I GGNCC 2 cut(s) 223, 1222
ScaI AGTACT 1 cut(s) 1561
SchI GAGTC 2 cut(s) 880, 2174
ScrFI CCNGG 3 cut(s) 515, 647, 1109
SduI GDGCHC 3 cut(s) 303, 437, 1366
SfaNI GCATC 9 cut(s) 529, 789, 958, 1391, 1419, 1533, 1938, 2082, 2178
SfcI CTRYAG 1 cut(s) 1264
SinI GGWCC 1 cut(s) 1222
SmiMI CAYNNNNRTG 3 cut(s) 894, 900, 2058
SmlI CTYRAG 3 cut(s) 353, 985, 1879
SmoI CTYRAG 3 cut(s) 353, 985, 1879
SsiI CCGC 6 cut(s) 37, 286, 505, 1212, 1280, 1798
SspMI CTAG 6 cut(s) 438, 456, 768, 1130, 1134, 1958
StyD4I CCNGG 3 cut(s) 513, 645, 1107
StyI CCWWGG 2 cut(s) 895, 1393
TaaI ACNGT 4 cut(s) 937, 1482, 1755, 2004
TaiI ACGT 5 cut(s) 409, 724, 931, 1336, 1705
TaqI TCGA 7 cut(s) 18, 112, 375, 874, 1050, 1413, 1529
TatI WGTACW 4 cut(s) 117, 681, 1559, 1772
TfiI GAWTC 4 cut(s) 23, 990, 2030, 2074
Tru1I TTAA 6 cut(s) 663, 960, 986, 1388, 1490, 1827
Tru9I TTAA 6 cut(s) 663, 960, 986, 1388, 1490, 1827
TscAI CASTG 4 cut(s) 940, 1084, 1458, 2131
TseFI GTSAC 4 cut(s) 288, 929, 1148, 1227
TseI GCWGC 5 cut(s) 319, 322, 452, 809, 1546
Tsp45I GTSAC 4 cut(s) 288, 929, 1148, 1227
TspDTI ATGAA 6 cut(s) 681, 719, 927, 1083, 1170, 1418
TspRI CASTG 4 cut(s) 940, 1084, 1458, 2131
Van91I CCANNNNNTGG 1 cut(s) 1744
Vha464I CTTAAG 1 cut(s) 985
VpaK11BI GGWCC 1 cut(s) 1222
VspI ATTAAT 1 cut(s) 1827
XapI RAATTY 4 cut(s) 238, 1020, 1609, 1891
XceI RCATGY 1 cut(s) 307
XcmI CCANNNNNNNNNTGG 1 cut(s) 896
XmnI GAANNNNTTC 1 cut(s) 88
XspI CTAG 6 cut(s) 438, 456, 768, 1130, 1134, 1958
ZrmI AGTACT 1 cut(s) 1561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.