RchiOBHm_Chr7g0188801

ADP-ribosylation factor GTPase-activating protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0011770
Physical Location & Seq
Forward (+)
8187726 .. 8196333
8608 bp
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UTR
Exon/CDS
Intron
PRQ16861

Sequence Viewer

Length: 2367 bp
ATGACTTTCGCAAAGCTCGATGATTCGCCAATGTTCCGCCAGCAGTTGCAAGGCTTGGAAGAGGGGGCAGAGGCATTGAGGGGAAGGTGTTCTAAGTTTTACAAAGGATGTCGAAAGTACACAGAAGGGCTTGGAGAAGCATACGATGGGGAAATTGCTTTTGTAACTGCCCTTGAAACTTTTGGGGGAGGGCATGGTGATCCTATTTTTTCAGCAATGGGGGGCCATATCATGACGAATTTCACAATTGCATTGAGAGAAATCGGAACATACAAGGAAGTTTTGCGGTCACAGGTAGAGCACATGCTAAATGATAGGCTGCTGCAATTTGTAAATGTTGACCTCCAAGATCTCAAGGAAGTCAGAAAGCGTTTCGACAAGGCTTCATTAATATATGATCAGGCACGTGAGAAGTTTCTGTCATTGAGGAAGAGCACTAGGCTGGATATAGCTGCTAGTATAGAGGAGGTTACTGCTCTCTCTGATATTGAGGCGAAAAAGAAGTTTGAGTTTCAGGAAGCTGTTAGTGGGGTGATGGATGCTCATCTTCGTTACTTCAAACAGGGATATGAGCTACTACACACAATGGAACCCTATATTCATCAGGTTTTGGAGTATGCACAACATACGAGAGAAAGTGCCAACCAGGAACAGATATCGCTTAATGAAAGAATAATAGAGTACAGAAGGCAGATTGATAGGGAAAGTAGGCAGTCCTTACGTGGTGTTCATGGTTGTTTTAGCGGAGATGGTATGCAGACTTTGGCTAGAAGATCAAATAAACTGATAGAGGAAGTGATGCAATCTGCTGCAAAGGGGAAGATTCAAACCATTCGTCAAGGATATCTCTCAAAACGGTCCTCCAATTTGAGAGGCGACTGGAAAAGAAGGTATTTCATTCTTGATAGTCGAGGGATGCTGTATTACTATCGCAAACCATGGAACCGGTCATCTTCTTCTCCGCAGAAGAATAATTCCACCGACTATGGCTCTGGGATTTTGAGTCGATGGCTTTCTTCCCACTATCATGGTGGTGTACATGATGAAAAATCCGTTGCACGTCACACTGTGAACTTGCTGACATCAACAATTAAGGTTGATGCAGACCAGACAGACTTAAGATTCTGCTTCAGGATTATATCACCTTTAAAAATTTACACTTTGCAGGCAGAGAATGCACTCGACCAAATGGATTGGATTGAGAAAATCACTGGAGTAATTTCTTCATTATTGAGTTTCCAGGCACCTGAGAGGCGTCTGTTAGCTAGCTCTATGGGTAGCGACGATCATTTCTCTGCAAGCGAGAGCAATTCATTAGAAAGTTATCGTGATGTTGATCAGACAGCTATTCAGGACCAGTCACCAAAAATCTTCACTAATAATTATTTGCGTACCTATAGAAGTTTGCAACCGCATAAGCCGAGTGTGAAAACTGAGAAGCCAATTGAGATATTGAGAAGAGTACGTGGTAATGACAAGTGTGCTGATTGTGGGGCACCTGACCCAGATTGGGCATCCTTAAACCTTGGTATTCTTATTTGCATTGAATGTTCTGGTGTTCATCGCAATCTTGGTGTACATGTATCAAAGGTTAGATCACTGACACTTGATGTGAAAGTATGGGAACCGTCTGTCTTAATCTTGTTTCAATCACTGGGGAATACTTATGCAAACTCGATTTGGGAGGAGATGTTGCCTTCAAAAAGTACTTCACAGGCTGATGATATTCTTACTGGTTTTTTCAAGTCTGATAGAAATTCAAATGATCAATCTCTTATGACAAAGCCCTGTTATGATGATCTGATTTCAGTAAAGGAGAGATTTATTCAAGCAAAGTATGCAGAAAAACGTTTTGTTCGCCCCGGAAAGATCAGTCAGAAACTCCACCCTGTGGAGCAACAGTTGTGGAAAAGTGTCTGTACTAATGACAAGCAAGCTGTTTACCGCAATATTGTCAGCTTTGAAGCTGATATTAATGCTGTATGTGGGAAAGCATTATGTGATAATTCAATAGACAAGCCTTCCTCAAGTAATTCAAATTTATCAAGTAGAAGTGAAGATCGCCTCATAGAAAACATCCCTGAGGGTTGTTCCCTGCTTCACCTGGCCTGCCAAATTGCTGATATTGGCATGGTGGAGTTACTTTTACAGTATGGTGCAAATATAAATGCTTCTGATTCAAAAGGCCAAACTCCACTCCATTATTGTGTTATGAGAGGGAATCCTGCTATTACAAAGATGCTTCTCATGAGAGGAGCAGATCCTCAAGCCACTGACAGAGAAGGTAAAACACCATGTAAGCTTGTATCAGAGTCAGCCTTGAATGACAATGGGATGCTTTCTATGCTGACAAACTCAGGCAGATGA

Protein Analysis

788

Amino Acids

89.16

Weight (kDa)

8.3

Isoelectric Point (pI)

50.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAR_3 PF16746 6 - 218 1.1e-27 BAR domain of APPL family
PH PF00169 278 - 407 2.3e-11 PH domain
ArfGap PF01412 481 - 573 7.2e-32 Putative GTPase activating protein for Arf
Ank_2 PF12796 692 - 759 7.9e-13 Ankyrin repeats (3 copies)
Ank PF00023 696 - 726 3.3e-06 Ankyrin repeat
Ank_4 PF13637 700 - 749 2.6e-10 Ankyrin repeats (many copies)
Ank_5 PF13857 715 - 765 3e-08 Ankyrin repeats (many copies)
Ank PF00023 729 - 760 2e-07 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011770)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G61980
fragaria_vesca FvH4_5g09370 FvH4_5g09370 FvH4_5g09370
malus_domestica MD06G1131800.v1.1 MD14G1148100.v1.1
prunus_persica Prupe.5G142800_v2.0.a1
pyrus_communis pycom06g12340 pycom14g12290
rosa_chinensis RchiOBHm_Chr7g0188801
rosa_laevigata RLG00000004658
rosa_multiflora Rmu_sc0003642.1_g000001
rosa_roxburghii Rroxscaffold_3G00266010
rosa_rugosa Rorug06G0494100
rosa_samantha Rh7AG098800 Rh7BG100500 Rh7CG102000 Rh7DG100600
rosa_wichuraiana Rw7G008510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1243, 1495
AccB7I CCANNNNNTGG 1 cut(s) 1891
AciI CCGC 6 cut(s) 37, 286, 744, 962, 1412, 1945
AclI AACGTT 1 cut(s) 1849
AclWI GGATC 2 cut(s) 194, 2255
AcsI RAATTY 4 cut(s) 238, 1152, 1756, 2038
AcuI CTGAAG 1 cut(s) 1114
AcvI CACGTG 1 cut(s) 407
AcyI GRCGYC 1 cut(s) 1255
AdeI CACNNNGTG 2 cut(s) 1069, 1891
AfaI GTAC 8 cut(s) 119, 683, 1038, 1393, 1464, 1578, 1708, 1921
AfiI CCNNNNNNNGG 2 cut(s) 1510, 1891
AflII CTTAAG 1 cut(s) 1117
AflIII ACRYGT 1 cut(s) 1579
AgeI ACCGGT 1 cut(s) 945
AjiI CACGTC 1 cut(s) 1061
AjnI CCWGG 3 cut(s) 645, 1239, 2103
Alw21I GWGCWC 2 cut(s) 303, 437
AlwI GGATC 2 cut(s) 194, 2255
AoxI GGCC 3 cut(s) 223, 2106, 2185
ApeKI GCWGC 4 cut(s) 319, 322, 452, 809
ApoI RAATTY 4 cut(s) 238, 1152, 1756, 2038
ArsI GACNNNNNNTTYG 2 cut(s) 820, 852
AseI ATTAAT 2 cut(s) 389, 1974
AsiGI ACCGGT 1 cut(s) 945
Asp700I GAANNNNTTC 1 cut(s) 88
AspS9I GGNCC 3 cut(s) 223, 858, 1354
AsuC2I CCSGG 1 cut(s) 1863
AsuHPI GGTGA 5 cut(s) 209, 544, 1134, 1353, 2093
AsuNHI GCTAGC 1 cut(s) 1265
AvaII GGWCC 2 cut(s) 858, 1354
AxyI CCTNAGG 1 cut(s) 2082
BaeGI GKGCMC 1 cut(s) 1498
BanI GGYRCC 2 cut(s) 1243, 1495
BbrPI CACGTG 1 cut(s) 407
Bbv12I GWGCWC 2 cut(s) 303, 437
BbvI GCAGC 4 cut(s) 306, 309, 439, 796
BccI CCATC 4 cut(s) 140, 529, 743, 1002
BciT130I CCWGG 3 cut(s) 647, 1241, 2105
BclI TGATCA 3 cut(s) 397, 1336, 1765
BcnI CCSGG 1 cut(s) 1863
BfaI CTAG 4 cut(s) 438, 456, 768, 1266
BfmI CTRYAG 1 cut(s) 1396
BfrI CTTAAG 1 cut(s) 1117
BglII AGATCT 1 cut(s) 349
BisI GCNGC 4 cut(s) 320, 323, 453, 810
BlsI GCNGC 4 cut(s) 321, 324, 454, 811
BmcAI AGTACT 1 cut(s) 1708
Bme1390I CCNGG 4 cut(s) 647, 1241, 1863, 2105
Bme18I GGWCC 2 cut(s) 858, 1354
BmgBI CACGTC 1 cut(s) 1061
BmgT120I GGNCC 3 cut(s) 223, 858, 1354
BmiI GGNNCC 6 cut(s) 224, 591, 944, 1245, 1497, 1626
BmrFI CCNGG 4 cut(s) 647, 1241, 1863, 2105
BmrI ACTGGG 1 cut(s) 1664
BmsI GCATC 7 cut(s) 529, 789, 906, 1090, 1523, 2229, 2325
BmtI GCTAGC 1 cut(s) 1269
BmuI ACTGGG 1 cut(s) 1664
BpmI CTGGAG 1 cut(s) 1233
BpuEI CTTGAG 3 cut(s) 338, 2011, 2250
BpuMI CCSGG 1 cut(s) 1863
BsaAI YACGTR 3 cut(s) 407, 722, 1466
BsaBI GATNNNNATC 2 cut(s) 543, 1335
BsaHI GRCGYC 1 cut(s) 1255
BsaJI CCNNGG 3 cut(s) 938, 1525, 1861
BsaWI WCCGGW 1 cut(s) 945
BsaXI ACNNNNNCTCC 4 cut(s) 1676, 1706, 1886, 1916
Bsc4I CCNNNNNNNGG 2 cut(s) 1510, 1891
Bse118I RCCGGY 1 cut(s) 945
Bse1I ACTGG 5 cut(s) 884, 1216, 1357, 1659, 1738
Bse21I CCTNAGG 1 cut(s) 2082
Bse3DI GCAATG 1 cut(s) 222
Bse8I GATNNNNATC 2 cut(s) 543, 1335
BseBI CCWGG 3 cut(s) 647, 1241, 2105
BseDI CCNNGG 3 cut(s) 938, 1525, 1861
BseGI GGATG 6 cut(s) 113, 544, 921, 1514, 2076, 2340
BseJI GATNNNNATC 2 cut(s) 543, 1335
BseLI CCNNNNNNNGG 2 cut(s) 1510, 1891
BseMI GCAATG 1 cut(s) 222
BseMII CTCAG 3 cut(s) 1239, 1425, 2073
BseNI ACTGG 5 cut(s) 884, 1216, 1357, 1659, 1738
BseRI GAGGAG 3 cut(s) 479, 1700, 2268
BseSI GKGCMC 1 cut(s) 1498
BseXI GCAGC 4 cut(s) 306, 309, 439, 796
BshFI GGCC 3 cut(s) 225, 2108, 2187
BshNI GGYRCC 2 cut(s) 1243, 1495
BshTI ACCGGT 1 cut(s) 945
BsiHKAI GWGCWC 2 cut(s) 303, 437
BsiSI CCGG 2 cut(s) 946, 1863
BslI CCNNNNNNNGG 2 cut(s) 1510, 1891
BsmI GAATGC 1 cut(s) 1180
BsnI GGCC 3 cut(s) 225, 2108, 2187
Bsp1286I GDGCHC 3 cut(s) 303, 437, 1498
Bsp1407I TGTACA 2 cut(s) 1036, 1576
Bsp19I CCATGG 1 cut(s) 938
BspACI CCGC 6 cut(s) 37, 286, 744, 962, 1412, 1945
BspANI GGCC 3 cut(s) 225, 2108, 2187
BspCNI CTCAG 3 cut(s) 1240, 1426, 2074
BspHI TCATGA 2 cut(s) 231, 2247
BspLI GGNNCC 6 cut(s) 224, 591, 944, 1245, 1497, 1626
BspOI GCTAGC 1 cut(s) 1269
BspPI GGATC 2 cut(s) 194, 2255
BspQI GCTCTTC 1 cut(s) 425
BspT107I GGYRCC 2 cut(s) 1243, 1495
BspTI CTTAAG 1 cut(s) 1117
BsrDI GCAATG 1 cut(s) 222
BsrFI RCCGGY 1 cut(s) 945
BsrGI TGTACA 2 cut(s) 1036, 1576
BsrI ACTGG 5 cut(s) 884, 1216, 1357, 1659, 1738
BssAI RCCGGY 1 cut(s) 945
BssECI CCNNGG 3 cut(s) 938, 1525, 1861
BssNI GRCGYC 1 cut(s) 1255
BssT1I CCWWGG 2 cut(s) 938, 1525
Bst2UI CCWGG 3 cut(s) 647, 1241, 2105
Bst4CI ACNGT 5 cut(s) 858, 1069, 1629, 1902, 2151
Bst6I CTCTTC 3 cut(s) 54, 425, 1453
BstACI GRCGYC 1 cut(s) 1255
BstAFI CTTAAG 1 cut(s) 1117
BstAPI GCANNNNNTGC 2 cut(s) 1175, 1838
BstAUI TGTACA 2 cut(s) 1036, 1576
BstBAI YACGTR 3 cut(s) 407, 722, 1466
BstC8I GCNNGC 6 cut(s) 41, 1167, 1267, 1300, 1935, 2110
BstDEI CTNAG 5 cut(s) 93, 1248, 1434, 2082, 2356
BstDSI CCRYGG 1 cut(s) 938
BstF5I GGATG 6 cut(s) 113, 544, 921, 1514, 2076, 2340
BstMWI GCNNNNNNNGC 3 cut(s) 1175, 1838, 2344
BstNI CCWGG 3 cut(s) 647, 1241, 2105
BstNSI RCATGY 2 cut(s) 307, 1583
BstSCI CCNGG 4 cut(s) 645, 1239, 1861, 2103
BstSFI CTRYAG 1 cut(s) 1396
BstSLI GKGCMC 1 cut(s) 1498
BstV1I GCAGC 4 cut(s) 306, 309, 439, 796
BstX2I RGATCY 2 cut(s) 349, 2260
BstXI CCANNNNNNTGG 1 cut(s) 1028
BstYI RGATCY 2 cut(s) 349, 2260
Bsu36I CCTNAGG 1 cut(s) 2082
BsuRI GGCC 3 cut(s) 225, 2108, 2187
BtgI CCRYGG 1 cut(s) 938
BtgZI GCGATG 1 cut(s) 1547
BtrI CACGTC 1 cut(s) 1061
BtsCI GGATG 6 cut(s) 113, 544, 921, 1514, 2076, 2340
BtsIMutI CAGTG 5 cut(s) 1065, 1209, 1598, 1652, 2271
Cac8I GCNNGC 6 cut(s) 41, 1167, 1267, 1300, 1935, 2110
CciI TCATGA 2 cut(s) 231, 2247
Cfr10I RCCGGY 1 cut(s) 945
Cfr13I GGNCC 3 cut(s) 223, 858, 1354
CseI GACGC 1 cut(s) 1244
Csp6I GTAC 8 cut(s) 118, 682, 1037, 1392, 1463, 1577, 1707, 1920
CspAI ACCGGT 1 cut(s) 945
CspCI CAANNNNNGTGG 2 cut(s) 1886, 1921
CviQI GTAC 8 cut(s) 118, 682, 1037, 1392, 1463, 1577, 1707, 1920
DdeI CTNAG 5 cut(s) 93, 1248, 1434, 2082, 2356
DraI TTTAAA 1 cut(s) 1149
DraIII CACNNNGTG 2 cut(s) 1069, 1891
Eam1104I CTCTTC 3 cut(s) 54, 425, 1453
EarI CTCTTC 3 cut(s) 54, 425, 1453
EciI GGCGGA 1 cut(s) 26
Eco130I CCWWGG 2 cut(s) 938, 1525
Eco32I GATATC 2 cut(s) 657, 845
Eco47I GGWCC 2 cut(s) 858, 1354
Eco57I CTGAAG 1 cut(s) 1114
Eco72I CACGTG 1 cut(s) 407
Eco81I CCTNAGG 1 cut(s) 2082
EcoRII CCWGG 3 cut(s) 645, 1239, 2103
EcoRV GATATC 2 cut(s) 657, 845
EcoT14I CCWWGG 2 cut(s) 938, 1525
ErhI CCWWGG 2 cut(s) 938, 1525
FbaI TGATCA 3 cut(s) 397, 1336, 1765
Fnu4HI GCNGC 4 cut(s) 320, 323, 453, 810
FokI GGATG 6 cut(s) 120, 551, 928, 1501, 2063, 2347
Fsp4HI GCNGC 4 cut(s) 320, 323, 453, 810
FspBI CTAG 4 cut(s) 438, 456, 768, 1266
GluI GCNGC 4 cut(s) 320, 323, 453, 810
GsuI CTGGAG 1 cut(s) 1233
HaeIII GGCC 3 cut(s) 225, 2108, 2187
HapII CCGG 2 cut(s) 946, 1863
HgaI GACGC 1 cut(s) 1244
Hin1I GRCGYC 1 cut(s) 1255
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HindIII AAGCTT 1 cut(s) 2300
HinfI GANTC 7 cut(s) 23, 823, 1003, 1122, 2177, 2221, 2312
HpaII CCGG 2 cut(s) 946, 1863
HphI GGTGA 5 cut(s) 209, 544, 1134, 1353, 2093
Hpy166II GTNNAC 6 cut(s) 120, 340, 1037, 1072, 1577, 1942
Hpy188I TCNGA 9 cut(s) 266, 365, 484, 1341, 1750, 1803, 1878, 2176, 2311
Hpy188III TCNNGA 7 cut(s) 232, 515, 902, 1132, 1328, 1352, 2248
Hpy8I GTNNAC 6 cut(s) 120, 340, 1037, 1072, 1577, 1942
Hpy99I CGWCG 1 cut(s) 1286
HpyAV CCTTC 7 cut(s) 78, 119, 681, 882, 1707, 2031, 2276
HpyCH4III ACNGT 5 cut(s) 858, 1069, 1629, 1902, 2151
HpyCH4IV ACGT 5 cut(s) 406, 721, 1060, 1465, 1849
HpyF10VI GCNNNNNNNGC 3 cut(s) 1175, 1838, 2344
HpyF3I CTNAG 5 cut(s) 93, 1248, 1434, 2082, 2356
HpySE526I ACGT 5 cut(s) 406, 721, 1060, 1465, 1849
Hsp92I GRCGYC 1 cut(s) 1255
Ksp22I TGATCA 3 cut(s) 397, 1336, 1765
LguI GCTCTTC 1 cut(s) 425
LmnI GCTCC 2 cut(s) 1894, 2255
Lsp1109I GCAGC 4 cut(s) 306, 309, 439, 796
LweI GCATC 7 cut(s) 529, 789, 906, 1090, 1523, 2229, 2325
MaeI CTAG 4 cut(s) 438, 456, 768, 1266
MaeII ACGT 5 cut(s) 406, 721, 1060, 1465, 1849
MaeIII GTNAC 7 cut(s) 163, 288, 469, 551, 1061, 1359, 2139
MfeI CAATTG 2 cut(s) 246, 1443
MflI RGATCY 2 cut(s) 349, 2260
MhlI GDGCHC 3 cut(s) 303, 437, 1498
MlyI GAGTC 2 cut(s) 1012, 2321
MroXI GAANNNNTTC 1 cut(s) 88
MseI TTAA 8 cut(s) 389, 663, 1092, 1118, 1148, 1520, 1637, 1974
MslI CAYNNNNRTG 3 cut(s) 1026, 1032, 2205
MspCI CTTAAG 1 cut(s) 1117
MspI CCGG 2 cut(s) 946, 1863
MspR9I CCNGG 4 cut(s) 647, 1241, 1863, 2105
MunI CAATTG 2 cut(s) 246, 1443
Mva1269I GAATGC 1 cut(s) 1180
MvaI CCWGG 3 cut(s) 647, 1241, 2105
MwoI GCNNNNNNNGC 3 cut(s) 1175, 1838, 2344
NciI CCSGG 1 cut(s) 1863
NcoI CCATGG 1 cut(s) 938
NheI GCTAGC 1 cut(s) 1265
NlaIV GGNNCC 6 cut(s) 224, 591, 944, 1245, 1497, 1626
NmeAIII GCCGAG 1 cut(s) 1446
NmuCI GTSAC 3 cut(s) 288, 1061, 1359
NspI RCATGY 2 cut(s) 307, 1583
PagI TCATGA 2 cut(s) 231, 2247
PciI ACATGT 1 cut(s) 1579
PciSI GCTCTTC 1 cut(s) 425
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PctI GAATGC 1 cut(s) 1180
PdmI GAANNNNTTC 1 cut(s) 88
PfeI GAWTC 5 cut(s) 23, 823, 1122, 2177, 2221
PflMI CCANNNNNTGG 1 cut(s) 1891
PinAI ACCGGT 1 cut(s) 945
PkrI GCNGC 4 cut(s) 321, 324, 454, 811
PleI GAGTC 2 cut(s) 1011, 2320
PmaCI CACGTG 1 cut(s) 407
PmlI CACGTG 1 cut(s) 407
PpsI GAGTC 2 cut(s) 1011, 2320
Ppu21I YACGTR 3 cut(s) 407, 722, 1466
PscI ACATGT 1 cut(s) 1579
PshBI ATTAAT 2 cut(s) 389, 1974
Psp1406I AACGTT 1 cut(s) 1849
Psp6I CCWGG 3 cut(s) 645, 1239, 2103
PspCI CACGTG 1 cut(s) 407
PspGI CCWGG 3 cut(s) 645, 1239, 2103
PspN4I GGNNCC 6 cut(s) 224, 591, 944, 1245, 1497, 1626
PspPI GGNCC 3 cut(s) 223, 858, 1354
PsuI RGATCY 2 cut(s) 349, 2260
RsaI GTAC 8 cut(s) 119, 683, 1038, 1393, 1464, 1578, 1708, 1921
RsaNI GTAC 8 cut(s) 118, 682, 1037, 1392, 1463, 1577, 1707, 1920
RseI CAYNNNNRTG 3 cut(s) 1026, 1032, 2205
SapI GCTCTTC 1 cut(s) 425
SaqAI TTAA 8 cut(s) 389, 663, 1092, 1118, 1148, 1520, 1637, 1974
SatI GCNGC 4 cut(s) 320, 323, 453, 810
Sau96I GGNCC 3 cut(s) 223, 858, 1354
ScaI AGTACT 1 cut(s) 1708
SchI GAGTC 2 cut(s) 1012, 2321
ScrFI CCNGG 4 cut(s) 647, 1241, 1863, 2105
SduI GDGCHC 3 cut(s) 303, 437, 1498
SfaNI GCATC 7 cut(s) 529, 789, 906, 1090, 1523, 2229, 2325
SfcI CTRYAG 1 cut(s) 1396
SinI GGWCC 2 cut(s) 858, 1354
SmiMI CAYNNNNRTG 3 cut(s) 1026, 1032, 2205
SmlI CTYRAG 4 cut(s) 353, 1117, 2026, 2265
SmoI CTYRAG 4 cut(s) 353, 1117, 2026, 2265
SsiI CCGC 6 cut(s) 37, 286, 744, 962, 1412, 1945
SspI AATATT 1 cut(s) 1951
SspMI CTAG 4 cut(s) 438, 456, 768, 1266
StyD4I CCNGG 4 cut(s) 645, 1239, 1861, 2103
StyI CCWWGG 2 cut(s) 938, 1525
TaaI ACNGT 5 cut(s) 858, 1069, 1629, 1902, 2151
TaiI ACGT 5 cut(s) 409, 724, 1063, 1468, 1852
TaqI TCGA 7 cut(s) 18, 112, 375, 910, 1006, 1182, 1676
TatI WGTACW 6 cut(s) 117, 681, 1036, 1576, 1706, 1919
TfiI GAWTC 5 cut(s) 23, 823, 1122, 2177, 2221
Tru1I TTAA 8 cut(s) 389, 663, 1092, 1118, 1148, 1520, 1637, 1974
Tru9I TTAA 8 cut(s) 389, 663, 1092, 1118, 1148, 1520, 1637, 1974
TscAI CASTG 5 cut(s) 1072, 1216, 1605, 1659, 2278
TseFI GTSAC 3 cut(s) 288, 1061, 1359
TseI GCWGC 4 cut(s) 319, 322, 452, 809
Tsp45I GTSAC 3 cut(s) 288, 1061, 1359
TspDTI ATGAA 9 cut(s) 375, 590, 681, 719, 886, 1059, 1215, 1302, 1550
TspGWI ACGGA 1 cut(s) 1042
TspRI CASTG 5 cut(s) 1072, 1216, 1605, 1659, 2278
Van91I CCANNNNNTGG 1 cut(s) 1891
Vha464I CTTAAG 1 cut(s) 1117
VpaK11BI GGWCC 2 cut(s) 858, 1354
VspI ATTAAT 2 cut(s) 389, 1974
XapI RAATTY 4 cut(s) 238, 1152, 1756, 2038
XceI RCATGY 2 cut(s) 307, 1583
XcmI CCANNNNNNNNNTGG 1 cut(s) 1028
XmnI GAANNNNTTC 1 cut(s) 88
XspI CTAG 4 cut(s) 438, 456, 768, 1266
ZrmI AGTACT 1 cut(s) 1708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.