AT5G63410
NAC Family

inactive leucine-rich repeat receptor-like protein kinase At3g03770

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
25394938 .. 25398282
3345 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G63410.1

Sequence Viewer

Length: 2043 bp
ATGGGTTTGTTTAAATTCATCTTCTTGTTATCTCTTCTATGGAGTTTCTACAGTTTAGGCTCATCTCAGCTACAAGCTTCACAAGCACAAGTTCTTCTTCAGCTGAAAAAACACTTAGAATATCCACAACAGCTAGAATCTTGGTATGATCACAGAACCAATTTCTGCTACTTACAAGCAACACCATCGATGAACATCACTTGTTTCTCTAATTCAGTCTCAGAGCTAAACATCTTCGGTGATAAGTCATCAGAAAAAGCCAAAAGCTTTGATGGTTTTGCTATCTCTAATGTTACTTTATCTGATGGATTCTCCATTGAATCATTTGTCACTACACTGTCAAGGCTAAAATCTCTTAGGGTTCTTACTCTGGCTTCTCTAGGGATTTGGGGTCGTCTCCCTGAGAAACTTCATCGTTTATCTTCACTTGAGTATTTGGATTTGAGCAATAACTTTCTGTTTGGTTCAGTACCACCTAAGTTGTCTACAATGGTAAAGCTTGAAACTTTCAGATTTGATCATAACTTCTTCAATGGCACATTACCTAGCTGGTTTGATTCGTATTGGTATCTCAAAGTTCTTAGCTTTAAAAGTAATAAGCTATCAGGAGAGCTACATTCTTCATTACTCTCGTTGTCAACAATCGAGTATATCGATTTGAGAGCGAATTCTCTGAGTGGTTCACTTCCGGATGATCTGAAATGTGGAAGCAAACTCTGGTTTATCGACATTTCCGACAATAAGTTAACCGGAAAACTTCCTCGTTGCTTAAGCAGCAAGCAAGATATTGCGTTGAGATTCAATGGAAACTGTTTATCTCTAGAGAAACAGCAACATCCAGAATCTTTTTGTGTTAAAGAAGTTCGCGCTGCGGCTAAAGCTGAAGCAAAAGCAGAAGCAGAGGCTGCAAATGAATCAGGAAAAAGAAAATGGAAGAAAGGAGCTTTAATCGGCTTAATCGTTGGTATATCAATGTCGGTATTGGTTTTAGTCTGCTGTGTATTTATCTTGCTCAGAAGAAAAGGAGTAACAAAGAAGCATGTCCACCATAATACTGTCCAAGATAATCATCCAACTACTGGATTTTCTTCCGAGATACTCTCAAACGCAAGGTACATTTCTGAAACATCCAAGTTTGGTTCAGAGGATTTACCGGTATGTAGACAGTTTAGCTTAGAAGAGATAGTTAAAGCTACAAAGAACTTCGATAAGACTATGATACTCGGTGAAAGCTCCTTATATGGCACGCTTTACAAAGGAAATCTTGAGAATGGAACAAAAGTGGCAATAAGATGCTTACCTTCATCGAAGAAATACTCGATAAGGAATCTTAAACTGCGGTTGGATTTGCTCGCAAAGCTTAGACACCCGAATCTTGTCTGCTTGTTGGGTCATTGCATAGATTGTGGAGGAAAAGATGATTACAGCGTTGAGAAAGTCTTTTTGATTTATGAGTACATTCCAAATGGAAACTTCCAATCTTGTCTCTCAGATAATAGTTCAGGTAAGGGTATGAATTGGTCAGAGAGGCTTAATGTTCTCACAGGTGTTGCAAAAGCTGTTCATTTTCTTCACACTGGAGTTATTCCTGGATTCTTCAGCAATAGACTCAAGACTAACAACGTTTTGCTTAACCAACATCGGTTTGCGAAGCTGAGTGATTATGGTTTGTCCATTGTCTCTGAAGCAACCAGACATAACACAGAAATCGCAAAATCATGGCAAATGTCAAGGCTAGAAGACGATGTTTACAGCTTTGGATTGATTCTTCTACAATCAATCGTTGGACCATCTGTATCCGCAAGAGAAGAAGCATTTCTACGAGACGAACTGGCATCGTTGGAGAGCGAAGAAGGGAGGAGAAGAATGGTGAATCCGACAGTACAAGCCACTTGTCGAAACGGATCACTGATAAGAGTGATAACTCTGATGAACAAATGTGTTTCACCTGAATCTTTAAGCCGACCGTCCTTCGAAGATATCTTGTGGAATTTACAGTATGCTTCTCAGTTGCAAGCTGCTTCTGATGGTGACCAGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

680

Amino Acids

76.26

Weight (kDa)

8.88

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 408 - 662 1.2e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 413 - 664 6.9e-20 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1079
AccI GTMKAC 2 cut(s) 485, 1162
AccII CGCG 1 cut(s) 867
AccIII TCCGGA 1 cut(s) 688
AciI CCGC 3 cut(s) 872, 1339, 1800
AclI AACGTT 1 cut(s) 1623
AclWI GGATC 1 cut(s) 1912
AcsI RAATTY 3 cut(s) 14, 667, 1990
AcuI CTGAAG 4 cut(s) 83, 903, 1582, 1704
AfaI GTAC 4 cut(s) 471, 1115, 1457, 1884
AfiI CCNNNNNNNGG 1 cut(s) 1079
AflII CTTAAG 1 cut(s) 769
AgeI ACCGGT 1 cut(s) 1153
AgsI TTSAA 4 cut(s) 320, 503, 532, 802
AjnI CCWGG 1 cut(s) 1588
Alw26I GTCTC 5 cut(s) 223, 401, 1490, 1684, 1818
AlwI GGATC 1 cut(s) 1912
AlwNI CAGNNNCTG 1 cut(s) 905
Aor13HI TCCGGA 1 cut(s) 688
ApeKI GCWGC 4 cut(s) 774, 869, 905, 2018
ApoI RAATTY 3 cut(s) 14, 667, 1990
AsiGI ACCGGT 1 cut(s) 1153
Asp700I GAANNNNTTC 1 cut(s) 1815
AspLEI GCGC 1 cut(s) 869
AspS9I GGNCC 1 cut(s) 1787
AsuHPI GGTGA 5 cut(s) 251, 1238, 1882, 1938, 2042
AsuII TTCGAA 1 cut(s) 1974
AvaII GGWCC 1 cut(s) 1787
BarI GAAGNNNNNNTAC 2 cut(s) 1803, 1835
BbsI GAAGAC 1 cut(s) 1746
BbvI GCAGC 4 cut(s) 786, 856, 892, 2005
BccI CCATC 5 cut(s) 193, 266, 299, 1798, 2021
BcgI CGANNNNNNTGC 2 cut(s) 168, 202
BciT130I CCWGG 1 cut(s) 1590
BciVI GTATCC 1 cut(s) 1807
BclI TGATCA 2 cut(s) 148, 517
BcoDI GTCTC 5 cut(s) 223, 401, 1490, 1684, 1818
BfaI CTAG 5 cut(s) 134, 380, 546, 821, 1736
BfmI CTRYAG 1 cut(s) 49
BfrI CTTAAG 1 cut(s) 769
BfuI GTATCC 1 cut(s) 1807
BisI GCNGC 5 cut(s) 775, 870, 873, 906, 2019
BlsI GCNGC 5 cut(s) 776, 871, 874, 907, 2020
Bme1390I CCNGG 1 cut(s) 1590
Bme18I GGWCC 1 cut(s) 1787
BmgT120I GGNCC 1 cut(s) 1787
BmrFI CCNGG 1 cut(s) 1590
BmsI GCATC 2 cut(s) 1283, 1844
BpiI GAAGAC 1 cut(s) 1746
BplI GAGNNNNNCTC 2 cut(s) 1085, 1117
BpmI CTGGAG 1 cut(s) 1599
Bpu14I TTCGAA 1 cut(s) 1974
BpuEI CTTGAG 3 cut(s) 449, 1286, 1595
Bsa29I ATCGAT 2 cut(s) 188, 654
BsaBI GATNNNNATC 2 cut(s) 194, 1068
BsaWI WCCGGW 3 cut(s) 688, 749, 1153
Bsc4I CCNNNNNNNGG 1 cut(s) 1079
Bse118I RCCGGY 1 cut(s) 1153
Bse1I ACTGG 4 cut(s) 1084, 1582, 1836, 2035
Bse3DI GCAATG 1 cut(s) 1393
Bse8I GATNNNNATC 2 cut(s) 194, 1068
BseAI TCCGGA 1 cut(s) 688
BseBI CCWGG 1 cut(s) 1590
BseCI ATCGAT 2 cut(s) 188, 654
BseGI GGATG 4 cut(s) 697, 835, 1069, 1127
BseJI GATNNNNATC 2 cut(s) 194, 1068
BseLI CCNNNNNNNGG 1 cut(s) 1079
BseMI GCAATG 1 cut(s) 1393
BseMII CTCAG 8 cut(s) 80, 234, 393, 665, 1027, 1503, 1646, 2021
BseNI ACTGG 4 cut(s) 1084, 1582, 1836, 2035
BseRI GAGGAG 1 cut(s) 1873
BseXI GCAGC 4 cut(s) 786, 856, 892, 2005
Bsh1236I CGCG 1 cut(s) 867
Bsh1285I CGRYCG 1 cut(s) 1967
BshTI ACCGGT 1 cut(s) 1153
BshVI ATCGAT 2 cut(s) 188, 654
BsiEI CGRYCG 1 cut(s) 1967
BsiSI CCGG 3 cut(s) 689, 750, 1154
BslI CCNNNNNNNGG 1 cut(s) 1079
BsmAI GTCTC 5 cut(s) 223, 401, 1490, 1684, 1818
BsmBI CGTCTC 2 cut(s) 401, 1818
Bsp119I TTCGAA 1 cut(s) 1974
Bsp13I TCCGGA 1 cut(s) 688
Bsp143I GATC 4 cut(s) 148, 517, 694, 1904
BspACI CCGC 3 cut(s) 872, 1339, 1800
BspCNI CTCAG 8 cut(s) 79, 233, 394, 666, 1026, 1502, 1647, 2020
BspDI ATCGAT 2 cut(s) 188, 654
BspEI TCCGGA 1 cut(s) 688
BspFNI CGCG 1 cut(s) 867
BspPI GGATC 1 cut(s) 1912
BspT104I TTCGAA 1 cut(s) 1974
BspTI CTTAAG 1 cut(s) 769
BsrDI GCAATG 1 cut(s) 1393
BsrFI RCCGGY 1 cut(s) 1153
BsrI ACTGG 4 cut(s) 1084, 1582, 1836, 2035
BssAI RCCGGY 1 cut(s) 1153
BssMI GATC 4 cut(s) 148, 517, 694, 1904
Bst2UI CCWGG 1 cut(s) 1590
Bst4CI ACNGT 8 cut(s) 53, 339, 812, 1057, 1167, 1882, 1968, 1998
Bst6I CTCTTC 2 cut(s) 39, 1173
BstAFI CTTAAG 1 cut(s) 769
BstAPI GCANNNNNTGC 1 cut(s) 905
BstBI TTCGAA 1 cut(s) 1974
BstC8I GCNNGC 4 cut(s) 779, 1247, 1353, 2016
BstEII GGTNACC 1 cut(s) 2030
BstF5I GGATG 4 cut(s) 697, 835, 1069, 1127
BstFNI CGCG 1 cut(s) 867
BstHHI GCGC 1 cut(s) 869
BstKTI GATC 4 cut(s) 151, 520, 697, 1907
BstMAI GTCTC 5 cut(s) 223, 401, 1490, 1684, 1818
BstMBI GATC 4 cut(s) 148, 517, 694, 1904
BstMCI CGRYCG 1 cut(s) 1967
BstMWI GCNNNNNNNGC 5 cut(s) 83, 774, 878, 905, 1357
BstNI CCWGG 1 cut(s) 1590
BstNSI RCATGY 1 cut(s) 1043
BstPI GGTNACC 1 cut(s) 2030
BstSCI CCNGG 1 cut(s) 1588
BstSFI CTRYAG 1 cut(s) 49
BstUI CGCG 1 cut(s) 867
BstV1I GCAGC 4 cut(s) 786, 856, 892, 2005
BstV2I GAAGAC 1 cut(s) 1746
Bsu15I ATCGAT 2 cut(s) 188, 654
BsuI GTATCC 1 cut(s) 1807
BsuTUI ATCGAT 2 cut(s) 188, 654
BtsCI GGATG 4 cut(s) 697, 835, 1069, 1127
BtsIMutI CAGTG 4 cut(s) 335, 1575, 1907, 2042
Cac8I GCNNGC 4 cut(s) 779, 1247, 1353, 2016
CaiI CAGNNNCTG 1 cut(s) 905
CfoI GCGC 1 cut(s) 869
Cfr10I RCCGGY 1 cut(s) 1153
Cfr13I GGNCC 1 cut(s) 1787
ClaI ATCGAT 2 cut(s) 188, 654
Csp6I GTAC 4 cut(s) 470, 1114, 1456, 1883
CspAI ACCGGT 1 cut(s) 1153
CspCI CAANNNNNGTGG 2 cut(s) 462, 497
CviAII CATG 2 cut(s) 1040, 1719
CviQI GTAC 4 cut(s) 470, 1114, 1456, 1883
DpnI GATC 4 cut(s) 150, 519, 696, 1906
DpnII GATC 4 cut(s) 148, 517, 694, 1904
DraI TTTAAA 2 cut(s) 13, 589
Eam1104I CTCTTC 2 cut(s) 39, 1173
EarI CTCTTC 2 cut(s) 39, 1173
Eco32I GATATC 1 cut(s) 1981
Eco47I GGWCC 1 cut(s) 1787
Eco57I CTGAAG 4 cut(s) 83, 903, 1582, 1704
Eco91I GGTNACC 1 cut(s) 2030
EcoO65I GGTNACC 1 cut(s) 2030
EcoRI GAATTC 1 cut(s) 667
EcoRII CCWGG 1 cut(s) 1588
EcoRV GATATC 1 cut(s) 1981
Esp3I CGTCTC 2 cut(s) 401, 1818
FaeI CATG 2 cut(s) 1043, 1722
FalI AAGNNNNNCTT 4 cut(s) 81, 113, 1248, 1280
FatI CATG 2 cut(s) 1039, 1718
FbaI TGATCA 2 cut(s) 148, 517
FblI GTMKAC 2 cut(s) 485, 1162
Fnu4HI GCNGC 5 cut(s) 775, 870, 873, 906, 2019
FokI GGATG 4 cut(s) 704, 822, 1056, 1114
Fsp4HI GCNGC 5 cut(s) 775, 870, 873, 906, 2019
FspBI CTAG 5 cut(s) 134, 380, 546, 821, 1736
GlaI GCGC 1 cut(s) 868
GluI GCNGC 5 cut(s) 775, 870, 873, 906, 2019
GsuI CTGGAG 1 cut(s) 1599
HapII CCGG 3 cut(s) 689, 750, 1154
HhaI GCGC 1 cut(s) 869
Hin1II CATG 2 cut(s) 1043, 1722
Hin6I GCGC 1 cut(s) 867
HinP1I GCGC 1 cut(s) 867
HincII GTYRAC 2 cut(s) 639, 747
HindII GTYRAC 2 cut(s) 639, 747
HindIII AAGCTT 4 cut(s) 75, 265, 497, 1358
HpaI GTTAAC 1 cut(s) 747
HpaII CCGG 3 cut(s) 689, 750, 1154
HphI GGTGA 5 cut(s) 251, 1238, 1882, 1938, 2042
Hpy166II GTNNAC 7 cut(s) 486, 639, 683, 747, 1045, 1163, 1750
Hpy188III TCNNGA 7 cut(s) 606, 689, 821, 839, 918, 1265, 1612
Hpy8I GTNNAC 7 cut(s) 486, 639, 683, 747, 1045, 1163, 1750
HpyAV CCTTC 3 cut(s) 1311, 1847, 1981
HpyCH4III ACNGT 8 cut(s) 53, 339, 812, 1057, 1167, 1882, 1968, 1998
HpyCH4IV ACGT 1 cut(s) 1623
HpyCH4V TGCA 4 cut(s) 908, 1398, 1553, 2014
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 774, 878, 905, 1357
HpySE526I ACGT 1 cut(s) 1623
Hsp92II CATG 2 cut(s) 1043, 1722
HspAI GCGC 1 cut(s) 867
Kpn2I TCCGGA 1 cut(s) 688
Ksp22I TGATCA 2 cut(s) 148, 517
KspAI GTTAAC 1 cut(s) 747
Kzo9I GATC 4 cut(s) 148, 517, 694, 1904
LmnI GCTCC 2 cut(s) 941, 1238
Lsp1109I GCAGC 4 cut(s) 786, 856, 892, 2005
LweI GCATC 2 cut(s) 1283, 1844
MaeI CTAG 5 cut(s) 134, 380, 546, 821, 1736
MaeII ACGT 1 cut(s) 1623
MaeIII GTNAC 4 cut(s) 292, 328, 1027, 2030
MalI GATC 4 cut(s) 150, 519, 696, 1906
MboI GATC 4 cut(s) 148, 517, 694, 1904
MluCI AATT 6 cut(s) 14, 160, 211, 667, 1516, 1990
MlyI GAGTC 1 cut(s) 1602
MmeI TCCRAC 6 cut(s) 759, 1097, 1323, 1765, 1821, 1901
MnlI CCTC 6 cut(s) 771, 895, 1138, 1403, 1521, 1851
MroI TCCGGA 1 cut(s) 688
MroXI GAANNNNTTC 1 cut(s) 1815
MspA1I CMGCKG 1 cut(s) 103
MspCI CTTAAG 1 cut(s) 769
MspI CCGG 3 cut(s) 689, 750, 1154
MspR9I CCNGG 1 cut(s) 1590
MvaI CCWGG 1 cut(s) 1590
MvnI CGCG 1 cut(s) 867
MwoI GCNNNNNNNGC 5 cut(s) 83, 774, 878, 905, 1357
NdeII GATC 4 cut(s) 148, 517, 694, 1904
NlaIII CATG 2 cut(s) 1043, 1722
NmuCI GTSAC 2 cut(s) 328, 2030
NspI RCATGY 1 cut(s) 1043
NspV TTCGAA 1 cut(s) 1974
PcsI WCGNNNNNNNCGW 3 cut(s) 651, 732, 957
PdmI GAANNNNTTC 1 cut(s) 1815
PflMI CCANNNNNTGG 1 cut(s) 1079
PfoI TCCNGGA 1 cut(s) 1588
PinAI ACCGGT 1 cut(s) 1153
PkrI GCNGC 5 cut(s) 776, 871, 874, 907, 2020
PleI GAGTC 1 cut(s) 1602
PpsI GAGTC 1 cut(s) 1602
Psp1406I AACGTT 1 cut(s) 1623
Psp6I CCWGG 1 cut(s) 1588
PspEI GGTNACC 1 cut(s) 2030
PspGI CCWGG 1 cut(s) 1588
PspPI GGNCC 1 cut(s) 1787
PstNI CAGNNNCTG 1 cut(s) 905
PvuII CAGCTG 1 cut(s) 103
RsaI GTAC 4 cut(s) 471, 1115, 1457, 1884
RsaNI GTAC 4 cut(s) 470, 1114, 1456, 1883
SatI GCNGC 5 cut(s) 775, 870, 873, 906, 2019
Sau3AI GATC 4 cut(s) 148, 517, 694, 1904
Sau96I GGNCC 1 cut(s) 1787
SchI GAGTC 1 cut(s) 1602
ScrFI CCNGG 1 cut(s) 1590
SfaNI GCATC 2 cut(s) 1283, 1844
SfcI CTRYAG 1 cut(s) 49
SfuI TTCGAA 1 cut(s) 1974
SinI GGWCC 1 cut(s) 1787
SmlI CTYRAG 4 cut(s) 428, 769, 1265, 1610
SmoI CTYRAG 4 cut(s) 428, 769, 1265, 1610
Sse9I AATT 6 cut(s) 14, 160, 211, 667, 1516, 1990
SsiI CCGC 3 cut(s) 872, 1339, 1800
SspMI CTAG 5 cut(s) 134, 380, 546, 821, 1736
StyD4I CCNGG 1 cut(s) 1588
TaaI ACNGT 8 cut(s) 53, 339, 812, 1057, 1167, 1882, 1968, 1998
TaiI ACGT 1 cut(s) 1626
TaqI TCGA 9 cut(s) 188, 645, 654, 726, 1206, 1307, 1319, 1897, 1974
TasI AATT 6 cut(s) 14, 160, 211, 667, 1516, 1990
TatI WGTACW 2 cut(s) 1455, 1882
TauI GCSGC 1 cut(s) 875
TscAI CASTG 4 cut(s) 342, 1582, 1914, 2042
TseFI GTSAC 2 cut(s) 328, 2030
TseI GCWGC 4 cut(s) 774, 869, 905, 2018
Tsp45I GTSAC 2 cut(s) 328, 2030
TspDTI ATGAA 9 cut(s) 7, 206, 401, 612, 927, 1293, 1529, 1553, 1946
TspGWI ACGGA 1 cut(s) 1917
TspRI CASTG 4 cut(s) 342, 1582, 1914, 2042
Van91I CCANNNNNTGG 1 cut(s) 1079
Vha464I CTTAAG 1 cut(s) 769
VpaK11BI GGWCC 1 cut(s) 1787
XapI RAATTY 3 cut(s) 14, 667, 1990
XbaI TCTAGA 1 cut(s) 820
XceI RCATGY 1 cut(s) 1043
XmiI GTMKAC 2 cut(s) 485, 1162
XmnI GAANNNNTTC 1 cut(s) 1815
XspI CTAG 5 cut(s) 134, 380, 546, 821, 1736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.