Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007312

Physical Location & Seq

Genomic Coordinates Reverse (-)

25723049 .. 25725534

Gene Structure 2486 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G64320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGGTTATGCTAGCGAGATCAAAGCTAGCTCTAGATGTGAGCAGAAGATCACAGTCTTTGCAAAGAATCTGCTACTACGCAAGTCTCTCCTCTAGATTTTCCGGCGGCGGCGGAGATGATGGCGGCGGCAGCTCACCGGAAATCGGTGGTACCGATTCAGCAAACGAATGGGAGAAGCTCCTTAAACCATTCGATCTGGATTCTCTAAGGAATTCATTTCACAAGATAACTCCCTTTCAGCTCTATAAGCTACTTGAGTTACCTCTCAATGTATCCACTTCAATGGAGTTGTTCTCATGGACCGGTTCTCAAAACGGTTATCGTCACTCCTTCGATGTGTATCAAGTTCTTATAGGTAAGCTTGGTGCGAATGGTGAGTTTAAAACCATTGATAGATTGTTAATTCAGATGAAAGATGAAGGAATCGTTTTTAAAGAATCTCTTTTCATTTCGATTATGAGAGATTACGACAAAGCTGGTTTTCCTGGACAGACAACGAGATTGATGTTGGAGATGAGGAATGTCTATTCCTGTGAACCCACTTTTAAATCTTACAATGTTGTCTTGGAGATTTTGGTTTCTGGTAATTGTCATAAAGTTGCAGCTAATGTGTTCTACGATATGCTTAGCCGAAAGATTCCTCCAACGCTTTTCACATTTGGTGTTGTGATGAAAGCTTTTTGTGCTGTTAATGAGATAGATTCGGCTCTGTCTCTGCTTAGGGACATGACGAAACATGGATGTGTCCCAAACTCTGTTATTTACCAGACTCTTATACATTCGTTATCGAAGTGTAATAGAGTGAACGAAGCGCTTCAGCTTTTAGAGGAGATGTTTCTGATGGGATGTGTTCCTGATGCTGAGACTTTCAACGATGTTATCCTTGGTCTCTGTAAGTTTGATCGGATTAACGAAGCTGCTAAAATGGTGAACCGGATGCTGATTAGAGGGTTTGCTCCTGATGATATAACTTATGGTTATTTGATGAATGGTCTATGTAAGATAGGCCGGGTTGATGCTGCAAAAGATCTTTTTTACAGAATTCCGAAGCCGGAAATTGTGATCTTCAATACTCTTATTCACGGGTTTGTGACTCACGGAAGACTTGATGATGCTAAAGCTGTTTTATCAGATATGGTCACGTCTTATGGCATTGTTCCTGATGTCTGCACATATAACTCACTGATCTATGGATATTGGAAGGAGGGTCTTGTAGGTTTAGCTCTGGAAGTTCTTCATGACATGAGGAATAAGGGATGTAAGCCTAACGTCTACTCTTATACTATTTTAGTTGATGGTTTCTGTAAATTAGGAAAGATAGATGAAGCCTACAATGTTCTTAATGAAATGTCTGCCGATGGACTGAAACCCAACACTGTTGGTTTTAACTGTTTGATATCGGCTTTCTGCAAGGAACACAGAATCCCCGAGGCCGTAGAGATTTTCAGAGAGATGCCGAGAAAAGGCTGTAAACCCGATGTGTATACATTTAATTCGCTGATATCTGGACTATGTGAGGTCGACGAAATAAAGCATGCCTTGTGGTTACTTAGAGATATGATATCAGAAGGTGTTGTTGCTAATACTGTTACTTACAACACGCTGATCAACGCGTTTCTTAGAAGAGGTGAAATCAAAGAAGCTCGTAAACTAGTAAACGAGATGGTTTTCCAGGGATCCCCGCTTGATGAGATAACCTACAACAGTCTGATAAAAGGGCTGTGCAGGGCCGGGGAGGTAGATAAGGCGAGAAGCTTGTTTGAAAAGATGTTAAGAGACGGGCATGCACCAAGCAACATCTCCTGCAACATACTTATAAACGGGCTCTGCAGAAGCGGGATGGTGGAAGAAGCGGTTGAGTTTCAGAAAGAGATGGTTCTGAGAGGATCGACACCGGACATTGTGACATTTAACAGTCTGATAAACGGTCTGTGTAGGGCCGGTAGGATCGAAGATGGTTTGACGATGTTTAGGAAGCTTCAGGCTGAAGGAATACCGCCTGATACGGTGACGTTTAACACTTTGATGAGTTGGTTGTGCAAAGGAGGTTTTGTTTATGATGCTTGCTTACTTCTGGATGAAGGTATTGAAGATGGTTTTGTTCCAAATCATAGAACTTGGTCAATTTTGTTACAGAGTATTATTCCCCAAGAAACACTTGATAGACGAAGGTTTTATAATGCAGCTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0019538 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0140053 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

730

Amino Acids

81.96

Weight (kDa)

6.14

Isoelectric Point (pI)

35.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	184 - 228	5.5e-06	PPR repeat family
PPR_1	PF12854	247 - 278	8.7e-10	PPR repeat
PPR_2	PF13041	250 - 299	3.8e-12	PPR repeat family
PPR_1	PF12854	281 - 313	4.1e-06	PPR repeat
PPR_2	PF13041	285 - 334	8.8e-12	PPR repeat family
PPR_1	PF12854	316 - 345	3.9e-07	PPR repeat
PPR_3	PF13812	350 - 397	4.4e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	350 - 380	1.7e-06	PPR repeat
PPR_2	PF13041	351 - 396	2.3e-10	PPR repeat family
PPR_1	PF12854	384 - 416	3.1e-08	PPR repeat
PPR_2	PF13041	387 - 436	1.2e-18	PPR repeat family
PPR	PF01535	391 - 420	1.2e-06	PPR repeat
TPR_24	PF23276	402 - 517	3e-11	Fungal tetratrico peptide repeats
PPR_3	PF13812	411 - 471	1.8e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	418 - 451	9.9e-15	PPR repeat
PPR	PF01535	425 - 454	4.2e-07	PPR repeat
PPR_long	PF17177	440 - 544	1.3e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	453 - 485	5.6e-10	PPR repeat
PPR_2	PF13041	457 - 505	8.7e-20	PPR repeat family
TPR_24	PF23276	460 - 548	8.9e-08	Fungal tetratrico peptide repeats
PPR	PF01535	462 - 490	3e-07	PPR repeat
PPR_3	PF13812	481 - 539	2.1e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	488 - 520	9e-10	PPR repeat
PPR_2	PF13041	496 - 532	2.9e-06	PPR repeat family
TPR_24	PF23276	520 - 623	1.3e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	524 - 556	1.9e-09	PPR repeat
PPR_2	PF13041	528 - 576	4.5e-17	PPR repeat family
PPR	PF01535	530 - 557	1.1e-06	PPR repeat
PPR_1	PF12854	559 - 590	1.6e-12	PPR repeat
PPR_2	PF13041	563 - 611	3.5e-16	PPR repeat family
PPR	PF01535	565 - 594	3.7e-10	PPR repeat
PPR_1	PF12854	594 - 626	9.6e-08	PPR repeat
PPR_2	PF13041	597 - 646	1e-15	PPR repeat family
PPR	PF01535	600 - 629	4.2e-07	PPR repeat
PPR_3	PF13812	623 - 678	1.4e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	628 - 659	6.2e-11	PPR repeat
PPR_2	PF13041	632 - 681	2.1e-15	PPR repeat family
PPR	PF01535	635 - 665	4.3e-07	PPR repeat
PPR_1	PF12854	664 - 694	6.3e-07	PPR repeat
PPR_2	PF13041	667 - 712	7.4e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64320
fragaria_vesca	FvH4_5g29651 FvH4_5g29651
malus_domestica	MD02G1307900.v1.1
prunus_persica	Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1
pyrus_communis	pycom02g25910
rosa_chinensis	RchiOBHm_Chr7g0222741
rosa_laevigata	RLG00000002027
rosa_multiflora	Rmu_sc0007870.1_g000004 Rmu_sc0025009.1_g000002
rosa_roxburghii	Rroxscaffold_3G00236510
rosa_rugosa	Rorug07G0212100 Rorug07G0212200 Rorug07G0212200
rosa_samantha	Rh7AG356400 Rh7BG344800 Rh7CG373900 Rh7DG350700
rosa_wichuraiana	Rw7G030240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1817, 2178
Acc65I	GGTACC	1 cut(s)	149
AccB1I	GGYRCC	1 cut(s)	149
AccI	GTMKAC	3 cut(s)	1272, 1484, 1521
AccII	CGCG	1 cut(s)	1613
AciI	CCGC	9 cut(s)	105, 108, 111, 123, 126, 1682, 1836, 1853, 1997
AclWI	GGATC	4 cut(s)	1671, 1684, 1894, 1955
AcsI	RAATTY	2 cut(s)	211, 1041
AcuI	CTGAAG	3 cut(s)	800, 1964, 2007
AfaI	GTAC	1 cut(s)	151
AfeI	AGCGCT	1 cut(s)	813
AfiI	CCNNNNNNNGG	2 cut(s)	143, 1463
AflIII	ACRYGT	1 cut(s)	1611
AgeI	ACCGGT	1 cut(s)	302
AgsI	TTSAA	5 cut(s)	282, 871, 1069, 1763, 2090
AhlI	ACTAGT	1 cut(s)	1651
AjiI	CACGTC	1 cut(s)	1143
AjnI	CCWGG	2 cut(s)	484, 1671
AloI	GAACNNNNNNTCC	2 cut(s)	1407, 1439
Alw26I	GTCTC	5 cut(s)	89, 717, 857, 893, 1770
AlwI	GGATC	4 cut(s)	1671, 1684, 1894, 1955
Ama87I	CYCGRG	1 cut(s)	1427
Aor51HI	AGCGCT	1 cut(s)	813
AoxI	GGCC	4 cut(s)	1006, 1431, 1728, 1938
ApeKI	GCWGC	5 cut(s)	129, 602, 917, 1019, 2183
ApoI	RAATTY	2 cut(s)	211, 1041
AsiGI	ACCGGT	1 cut(s)	302
Asp700I	GAANNNNTTC	2 cut(s)	813, 1233
Asp718I	GGTACC	1 cut(s)	149
AspLEI	GCGC	1 cut(s)	814
AspS9I	GGNCC	3 cut(s)	300, 1728, 1938
AsuC2I	CCSGG	2 cut(s)	1010, 1732
AsuHPI	GGTGA	5 cut(s)	126, 386, 940, 1640, 2020
AsuNHI	GCTAGC	2 cut(s)	10, 25
AvaI	CYCGRG	1 cut(s)	1427
AvaII	GGWCC	1 cut(s)	300
BamHI	GGATCC	1 cut(s)	1676
BanI	GGYRCC	1 cut(s)	149
BanII	GRGCYC	1 cut(s)	1827
BbsI	GAAGAC	1 cut(s)	1108
BbvI	GCAGC	4 cut(s)	141, 614, 904, 1006
BccI	CCATC	9 cut(s)	113, 835, 1289, 1352, 1657, 1834, 1867, 1949, 2087
BceAI	ACGGC	1 cut(s)	1418
BciT130I	CCWGG	2 cut(s)	486, 1673
BciVI	GTATCC	1 cut(s)	283
BclI	TGATCA	1 cut(s)	1605
BcnI	CCSGG	2 cut(s)	1010, 1732
BcoDI	GTCTC	5 cut(s)	89, 717, 857, 893, 1770
BcuI	ACTAGT	1 cut(s)	1651
BfaI	CTAG	5 cut(s)	11, 26, 32, 93, 1652
BfmI	CTRYAG	1 cut(s)	1828
BfoI	RGCGCY	1 cut(s)	815
BfuI	GTATCC	1 cut(s)	283
BglII	AGATCT	1 cut(s)	1027
BisI	GCNGC	9 cut(s)	106, 109, 124, 127, 130, 603, 918, 1020, 2184
BlpI	GCTNAGC	1 cut(s)	626
BlsI	GCNGC	9 cut(s)	107, 110, 125, 128, 131, 604, 919, 1021, 2185
Bme1390I	CCNGG	4 cut(s)	486, 1010, 1673, 1732
Bme18I	GGWCC	1 cut(s)	300
BmeT110I	CYCGRG	1 cut(s)	1427
BmgBI	CACGTC	1 cut(s)	1143
BmgT120I	GGNCC	3 cut(s)	300, 1728, 1938
BmiI	GGNNCC	2 cut(s)	151, 1678
BmrFI	CCNGG	4 cut(s)	486, 1010, 1673, 1732
BmsI	GCATC	6 cut(s)	847, 927, 1006, 1102, 1443, 2050
BmtI	GCTAGC	2 cut(s)	14, 29
BpiI	GAAGAC	1 cut(s)	1108
BplI	GAGNNNNNCTC	2 cut(s)	278, 310
Bpu10I	CCTNAGC	1 cut(s)	719
Bpu1102I	GCTNAGC	1 cut(s)	626
BpuEI	CTTGAG	1 cut(s)	275
BpuMI	CCSGG	2 cut(s)	1010, 1732
BsaBI	GATNNNNATC	1 cut(s)	339
BsaI	GGTCTC	1 cut(s)	893
BsaJI	CCNNGG	4 cut(s)	883, 1428, 1672, 1731
BsaWI	WCCGGW	4 cut(s)	136, 302, 933, 1894
BsaXI	ACNNNNNCTCC	2 cut(s)	2037, 2067
Bsc4I	CCNNNNNNNGG	2 cut(s)	143, 1463
Bse118I	RCCGGY	2 cut(s)	302, 1940
Bse8I	GATNNNNATC	1 cut(s)	339
BseBI	CCWGG	2 cut(s)	486, 1673
BseDI	CCNNGG	4 cut(s)	883, 1428, 1672, 1731
BseGI	GGATG	6 cut(s)	746, 851, 942, 1262, 1845, 2083
BseJI	GATNNNNATC	1 cut(s)	339
BseLI	CCNNNNNNNGG	2 cut(s)	143, 1463
BseMII	CTCAG	2 cut(s)	852, 1871
BseRI	GAGGAG	2 cut(s)	79, 842
BseXI	GCAGC	4 cut(s)	141, 614, 904, 1006
BsgI	GTGCAG	2 cut(s)	1153, 1744
Bsh1236I	CGCG	1 cut(s)	1613
BshFI	GGCC	4 cut(s)	1008, 1433, 1730, 1940
BshNI	GGYRCC	1 cut(s)	149
BshTI	ACCGGT	1 cut(s)	302
BsiHKCI	CYCGRG	1 cut(s)	1427
BsiSI	CCGG	9 cut(s)	102, 137, 303, 934, 1009, 1052, 1731, 1895, 1941
BslFI	GGGAC	2 cut(s)	731, 737
BslI	CCNNNNNNNGG	2 cut(s)	143, 1463
BsmAI	GTCTC	5 cut(s)	89, 717, 857, 893, 1770
BsmBI	CGTCTC	1 cut(s)	1770
BsmFI	GGGAC	2 cut(s)	731, 737
BsnI	GGCC	4 cut(s)	1008, 1433, 1730, 1940
Bso31I	GGTCTC	1 cut(s)	893
BsoBI	CYCGRG	1 cut(s)	1427
Bsp1286I	GDGCHC	1 cut(s)	1827
Bsp1720I	GCTNAGC	1 cut(s)	626
BspACI	CCGC	9 cut(s)	105, 108, 111, 123, 126, 1682, 1836, 1853, 1997
BspANI	GGCC	4 cut(s)	1008, 1433, 1730, 1940
BspCNI	CTCAG	2 cut(s)	853, 1872
BspFNI	CGCG	1 cut(s)	1613
BspHI	TCATGA	1 cut(s)	1237
BspLI	GGNNCC	2 cut(s)	151, 1678
BspMAI	CTGCAG	1 cut(s)	1832
BspOI	GCTAGC	2 cut(s)	14, 29
BspPI	GGATC	4 cut(s)	1671, 1684, 1894, 1955
BspT107I	GGYRCC	1 cut(s)	149
BspTNI	GGTCTC	1 cut(s)	893
BsrFI	RCCGGY	2 cut(s)	302, 1940
BssAI	RCCGGY	2 cut(s)	302, 1940
BssECI	CCNNGG	4 cut(s)	883, 1428, 1672, 1731
BssNAI	GTATAC	1 cut(s)	1485
BssT1I	CCWWGG	1 cut(s)	883
Bst1107I	GTATAC	1 cut(s)	1485
Bst2UI	CCWGG	2 cut(s)	486, 1673
Bst4CI	ACNGT	9 cut(s)	54, 317, 1378, 1391, 1588, 1706, 1916, 1928, 2008
Bst6I	CTCTTC	1 cut(s)	1618
BstC8I	GCNNGC	5 cut(s)	12, 27, 1536, 1785, 2065
BstDEI	CTNAG	7 cut(s)	206, 626, 719, 861, 1550, 1619, 1880
BstF5I	GGATG	6 cut(s)	746, 851, 942, 1262, 1845, 2083
BstFNI	CGCG	1 cut(s)	1613
BstH2I	RGCGCY	1 cut(s)	815
BstHHI	GCGC	1 cut(s)	814
BstMAI	GTCTC	5 cut(s)	89, 717, 857, 893, 1770
BstMWI	GCNNNNNNNGC	3 cut(s)	129, 247, 683
BstNI	CCWGG	2 cut(s)	486, 1673
BstNSI	RCATGY	2 cut(s)	1538, 1787
BstSCI	CCNGG	4 cut(s)	484, 1008, 1671, 1730
BstSFI	CTRYAG	1 cut(s)	1828
BstUI	CGCG	1 cut(s)	1613
BstV1I	GCAGC	4 cut(s)	141, 614, 904, 1006
BstV2I	GAAGAC	1 cut(s)	1108
BstX2I	RGATCY	2 cut(s)	1027, 1676
BstXI	CCANNNNNNTGG	1 cut(s)	283
BstYI	RGATCY	2 cut(s)	1027, 1676
BstZ17I	GTATAC	1 cut(s)	1485
BsuI	GTATCC	1 cut(s)	283
BsuRI	GGCC	4 cut(s)	1008, 1433, 1730, 1940
BtrI	CACGTC	1 cut(s)	1143
BtsCI	GGATG	6 cut(s)	746, 851, 942, 1262, 1845, 2083
BtsIMutI	CAGTG	2 cut(s)	1181, 1374
Cac8I	GCNNGC	5 cut(s)	12, 27, 1536, 1785, 2065
CciI	TCATGA	1 cut(s)	1237
CfoI	GCGC	1 cut(s)	814
Cfr10I	RCCGGY	2 cut(s)	302, 1940
Cfr13I	GGNCC	3 cut(s)	300, 1728, 1938
Csp6I	GTAC	1 cut(s)	150
CspAI	ACCGGT	1 cut(s)	302
CviAII	CATG	7 cut(s)	297, 727, 737, 1238, 1243, 1535, 1784
CviQI	GTAC	1 cut(s)	150
DdeI	CTNAG	7 cut(s)	206, 626, 719, 861, 1550, 1619, 1880
DraI	TTTAAA	3 cut(s)	382, 433, 547
Eam1104I	CTCTTC	1 cut(s)	1618
EarI	CTCTTC	1 cut(s)	1618
EciI	GGCGGA	1 cut(s)	126
Eco130I	CCWWGG	1 cut(s)	883
Eco24I	GRGCYC	1 cut(s)	1827
Eco31I	GGTCTC	1 cut(s)	893
Eco32I	GATATC	3 cut(s)	1398, 1503, 1563
Eco47I	GGWCC	1 cut(s)	300
Eco47III	AGCGCT	1 cut(s)	813
Eco57I	CTGAAG	3 cut(s)	800, 1964, 2007
Eco88I	CYCGRG	1 cut(s)	1427
EcoRI	GAATTC	2 cut(s)	211, 1041
EcoRII	CCWGG	2 cut(s)	484, 1671
EcoRV	GATATC	3 cut(s)	1398, 1503, 1563
EcoT14I	CCWWGG	1 cut(s)	883
EcoT38I	GRGCYC	1 cut(s)	1827
ErhI	CCWWGG	1 cut(s)	883
Esp3I	CGTCTC	1 cut(s)	1770
FaeI	CATG	7 cut(s)	300, 730, 740, 1241, 1246, 1538, 1787
FalI	AAGNNNNNCTT	6 cut(s)	426, 458, 1523, 1555, 2142, 2174
FaqI	GGGAC	2 cut(s)	731, 737
FatI	CATG	7 cut(s)	296, 726, 736, 1237, 1242, 1534, 1783
FauI	CCCGC	2 cut(s)	1689, 1829
FbaI	TGATCA	1 cut(s)	1605
FblI	GTMKAC	3 cut(s)	1272, 1484, 1521
Fnu4HI	GCNGC	9 cut(s)	106, 109, 124, 127, 130, 603, 918, 1020, 2184
FokI	GGATG	6 cut(s)	753, 858, 949, 1269, 1852, 2090
FriOI	GRGCYC	1 cut(s)	1827
Fsp4HI	GCNGC	9 cut(s)	106, 109, 124, 127, 130, 603, 918, 1020, 2184
FspBI	CTAG	5 cut(s)	11, 26, 32, 93, 1652
GlaI	GCGC	1 cut(s)	813
GluI	GCNGC	9 cut(s)	106, 109, 124, 127, 130, 603, 918, 1020, 2184
HaeII	RGCGCY	1 cut(s)	815
HaeIII	GGCC	4 cut(s)	1008, 1433, 1730, 1940
HapII	CCGG	9 cut(s)	102, 137, 303, 934, 1009, 1052, 1731, 1895, 1941
HhaI	GCGC	1 cut(s)	814
Hin1II	CATG	7 cut(s)	300, 730, 740, 1241, 1246, 1538, 1787
Hin6I	GCGC	1 cut(s)	812
HinP1I	GCGC	1 cut(s)	812
HincII	GTYRAC	1 cut(s)	1522
HindII	GTYRAC	1 cut(s)	1522
HindIII	AAGCTT	4 cut(s)	359, 675, 1753, 1976
HpaII	CCGG	9 cut(s)	102, 137, 303, 934, 1009, 1052, 1731, 1895, 1941
HphI	GGTGA	5 cut(s)	126, 386, 940, 1640, 2020
Hpy166II	GTNNAC	9 cut(s)	536, 805, 931, 1273, 1472, 1485, 1522, 1649, 1657
Hpy8I	GTNNAC	9 cut(s)	536, 805, 931, 1273, 1472, 1485, 1522, 1649, 1657
Hpy99I	CGWCG	1 cut(s)	1526
HpyAV	CCTTC	7 cut(s)	340, 413, 1195, 1562, 1982, 2075, 2163
HpyCH4III	ACNGT	9 cut(s)	54, 317, 1378, 1391, 1588, 1706, 1916, 1928, 2008
HpyCH4IV	ACGT	3 cut(s)	1142, 1269, 2012
HpyF10VI	GCNNNNNNNGC	3 cut(s)	129, 247, 683
HpyF3I	CTNAG	7 cut(s)	206, 626, 719, 861, 1550, 1619, 1880
HpySE526I	ACGT	3 cut(s)	1142, 1269, 2012
Hsp92II	CATG	7 cut(s)	300, 730, 740, 1241, 1246, 1538, 1787
HspAI	GCGC	1 cut(s)	812
KpnI	GGTACC	1 cut(s)	153
Ksp22I	TGATCA	1 cut(s)	1605
LmnI	GCTCC	2 cut(s)	183, 961
Lsp1109I	GCAGC	4 cut(s)	141, 614, 904, 1006
LweI	GCATC	6 cut(s)	847, 927, 1006, 1102, 1443, 2050
MaeI	CTAG	5 cut(s)	11, 26, 32, 93, 1652
MaeII	ACGT	3 cut(s)	1142, 1269, 2012
MaeIII	GTNAC	9 cut(s)	258, 323, 1090, 1138, 1545, 1588, 1903, 2008, 2130
MboII	GAAGA	8 cut(s)	57, 1057, 1113, 1226, 1635, 1859, 1964, 2102
MflI	RGATCY	2 cut(s)	1027, 1676
MhlI	GDGCHC	1 cut(s)	1827
MluCI	AATT	8 cut(s)	211, 402, 586, 1041, 1056, 1307, 1492, 2124
MluI	ACGCGT	1 cut(s)	1611
MlyI	GAGTC	2 cut(s)	763, 1087
MmeI	TCCRAC	2 cut(s)	489, 668
MroXI	GAANNNNTTC	2 cut(s)	813, 1233
MslI	CAYNNNNRTG	3 cut(s)	281, 741, 2024
MspI	CCGG	9 cut(s)	102, 137, 303, 934, 1009, 1052, 1731, 1895, 1941
MspR9I	CCNGG	4 cut(s)	486, 1010, 1673, 1732
MvaI	CCWGG	2 cut(s)	486, 1673
MvnI	CGCG	1 cut(s)	1613
MwoI	GCNNNNNNNGC	3 cut(s)	129, 247, 683
NciI	CCSGG	2 cut(s)	1010, 1732
NheI	GCTAGC	2 cut(s)	10, 25
NlaIII	CATG	7 cut(s)	300, 730, 740, 1241, 1246, 1538, 1787
NlaIV	GGNNCC	2 cut(s)	151, 1678
NmeAIII	GCCGAG	1 cut(s)	1482
NmuCI	GTSAC	5 cut(s)	323, 1090, 1138, 1903, 2008
NspI	RCATGY	2 cut(s)	1538, 1787
PaeI	GCATGC	2 cut(s)	1538, 1787
PagI	TCATGA	1 cut(s)	1237
PcsI	WCGNNNNNNNCGW	1 cut(s)	150
PdmI	GAANNNNTTC	2 cut(s)	813, 1233
PfeI	GAWTC	8 cut(s)	66, 155, 200, 423, 437, 637, 701, 1422
PfoI	TCCNGGA	1 cut(s)	484
PinAI	ACCGGT	1 cut(s)	302
PkrI	GCNGC	9 cut(s)	107, 110, 125, 128, 131, 604, 919, 1021, 2185
PleI	GAGTC	2 cut(s)	763, 1087
PpsI	GAGTC	2 cut(s)	763, 1087
PsiI	TTATAA	2 cut(s)	1817, 2178
Psp6I	CCWGG	2 cut(s)	484, 1671
PspGI	CCWGG	2 cut(s)	484, 1671
PspN4I	GGNNCC	2 cut(s)	151, 1678
PspPI	GGNCC	3 cut(s)	300, 1728, 1938
PstI	CTGCAG	1 cut(s)	1832
PsuI	RGATCY	2 cut(s)	1027, 1676
RsaI	GTAC	1 cut(s)	151
RsaNI	GTAC	1 cut(s)	150
RseI	CAYNNNNRTG	3 cut(s)	281, 741, 2024
SalI	GTCGAC	1 cut(s)	1520
SatI	GCNGC	9 cut(s)	106, 109, 124, 127, 130, 603, 918, 1020, 2184
Sau96I	GGNCC	3 cut(s)	300, 1728, 1938
SchI	GAGTC	2 cut(s)	763, 1087
ScrFI	CCNGG	4 cut(s)	486, 1010, 1673, 1732
SduI	GDGCHC	1 cut(s)	1827
SfaNI	GCATC	6 cut(s)	847, 927, 1006, 1102, 1443, 2050
SfcI	CTRYAG	1 cut(s)	1828
SinI	GGWCC	1 cut(s)	300
SmiMI	CAYNNNNRTG	3 cut(s)	281, 741, 2024
SmlI	CTYRAG	1 cut(s)	254
SmoI	CTYRAG	1 cut(s)	254
SpeI	ACTAGT	1 cut(s)	1651
SphI	GCATGC	2 cut(s)	1538, 1787
Sse9I	AATT	8 cut(s)	211, 402, 586, 1041, 1056, 1307, 1492, 2124
SsiI	CCGC	9 cut(s)	105, 108, 111, 123, 126, 1682, 1836, 1853, 1997
SspMI	CTAG	5 cut(s)	11, 26, 32, 93, 1652
StyD4I	CCNGG	4 cut(s)	484, 1008, 1671, 1730
StyI	CCWWGG	1 cut(s)	883
TaaI	ACNGT	9 cut(s)	54, 317, 1378, 1391, 1588, 1706, 1916, 1928, 2008
TaiI	ACGT	3 cut(s)	1145, 1272, 2015
TaqI	TCGA	7 cut(s)	192, 333, 452, 788, 1521, 1889, 1950
TasI	AATT	8 cut(s)	211, 402, 586, 1041, 1056, 1307, 1492, 2124
TauI	GCSGC	4 cut(s)	108, 111, 126, 129
TfiI	GAWTC	8 cut(s)	66, 155, 200, 423, 437, 637, 701, 1422
TscAI	CASTG	2 cut(s)	1188, 1381
TseFI	GTSAC	5 cut(s)	323, 1090, 1138, 1903, 2008
TseI	GCWGC	5 cut(s)	129, 602, 917, 1019, 2183
Tsp45I	GTSAC	5 cut(s)	323, 1090, 1138, 1903, 2008
TspGWI	ACGGA	1 cut(s)	1113
TspRI	CASTG	2 cut(s)	1188, 1381
VpaK11BI	GGWCC	1 cut(s)	300
XapI	RAATTY	2 cut(s)	211, 1041
XbaI	TCTAGA	2 cut(s)	31, 92
XceI	RCATGY	2 cut(s)	1538, 1787
XmiI	GTMKAC	3 cut(s)	1272, 1484, 1521
XmnI	GAANNNNTTC	2 cut(s)	813, 1233
XspI	CTAG	5 cut(s)	11, 26, 32, 93, 1652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.