Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0007312

Physical Location & Seq

Genomic Coordinates Reverse (-)

20587264 .. 20591675

Gene Structure 4412 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g29651.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGTTAAAAATACCAAAACTTTTGCATCCTCGCACCAGAAAGTTTCAATCTTTGATAAAAAATCCTCACCTCTCAGCTGGGTATGTTAAGGGTAGTGATGACAGTGGTTCCGAGGAGAACGAGTGGGAGAGGTTGCTTAAGCCATTTGACCTCAATGAGCTCCGGAAATCCCTCATTCAAATCACCCCAATTCAGCTTTCTAAGTTACTTGAACTCCCACTGGATGTGCCCACCTCATTGGAAGTATTCGAAATGGTGGGTGCCCAGAGGGGGTATAGACATTCATTTGATGTGTATTGTGTGTTGATTGATAAGCTCGGCGCGGCGGGGGAGTTTAAGGCCATAGATAGGTTGTTGATGCAGATTAAAGCTGAAGGGATGGTTTTTAGGGAGTCCCTTTTCATTATGATTATGAAACATTACGGCAGAGCAGGCTTGCCGGGTCAAGCCACTCGGCTGCTTCTCGATATGAGAGGGTTTTATTCTTTTGAGCCTACTTTTAAGTCTTATAATGCTGTTTTGGATGTGCTGGTGGCTGGGAATTGCCCCAAGGTGGCACCTAATGTGTTTTATGACATGTTGAGTAGGGGTGTCTCTCCCAATGTCTATACATTTGGGTTGGTTCTGAAGGCGTTTTGTATGGTTAATGAAGTGGATTCTGCATGCTCGCTTCTTAGAGACATGACGAAGCACGGGTGTGTGCCCAATTCTGTGGTTTACCAGACTCTTATACATGCCCTCTGCAGAAATGAGCGGGTGAATGAAGCATTGAGGCTTTTGGAGGAAATGTTCTTGATGGGTTGCACTCCTGATGTTCAGACTTTTAATGATGTTATCCATGGTCTCTGCAAGGCCAAGCGAATGCCAGAGGCTGCAAAGTTGGTTGATCGGATGCTTTTGCGGGGTTTTTCTCCTGATGAGATAACTTATGGAGTTTTAATGAACGGATTATGTAGAGCAGGGCAAGTTGATGAAGCAAGGGCATTGCTAGACAAAGTGCCTAGCCCGAATGCTGTGCTTTTTAATACCTTGATCAATGGTTATGTTACCAGTGGACGCTTTGATGAAGCCAAAGCTGTCTATCGTGATAGCATGCTAGGTAACGGCTGTGACCTTGATGTTTATACATTCAATATTCTGATTCGTGGACTTTGCAAGAAGGGCAGTTTGGCTTCTGCTCGTGAATTGGTCAGTGAGATGGAAACTAAAGGCTGCAAGCCCAATGTGATAACCTACACAATATTGGTTGATGGGTTATGCAAGGAAGGTCAACTTCAGGAAGCTAGTGATGTTTTAAATGAGATGTCATACAAGGGACTCGGTCTGAACATCGTGGGATACAATTCTCTAATATCTGCTCTTTGCAAGGACGGGAAAGTTCATGAAGCTTTGAAGTTATTTCGTGAAATATCAAGCAAAGGATGTAAGGCAGACATATATACCTTTAATTCTTTGATATTTGGATTGTGCAAGGTTGATAGGATGGAAGAGGCATTGGGATTGTACCATGATATGTTATTGGAGGGTGTGATTGCCAACACTGTAACTTATAACACATTAATTCATGGTTATCTCACTGGAGGTGCTATCAAAGAAGCACTGAAGCTTGTAAATGAAATGTTATCCAGAGGATGCCCTCTTGACAAAATAACCTATAATGGGTTAGTAAAGGCACTCTGCAGAGCTGGGCTAGTTGAAAAAGCACGGGGATTGTTTGAAGAAATGATGAGGACAGGACTTCATCCAGATAGTATCTCATGCAATATTTTGATTAATGGCCTCTGCAGAAGTGGCAAAGTAAATGAAGCCCTTGAGTTTCTAAGGGATATGATTCATCGCGGTTTAATGCCCGACATAGTCACTTATAATAGCCTGATAAATGGTCTATGCAAGATGGGACACATTTGGGAAGCTTTGAATCTCTTTGACAGATTACAAGCTGAAGGGGTATATCCTGATGCTATTACTTATAACACTTTGATCAGTTGGCATTGCAAAGAGGGCAGGATTAGTGATGCTTGTTTGCTTCTACATAGAGGTGTGACTAATGGATTCATACCAAATCATGTGACGTGGTATATATTGGTCAGCAACCTGTCCAAAGAAAGAGGTTACAGGCATCAGGGATTTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0019538 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0140053 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

712

Amino Acids

79.44

Weight (kDa)

7.92

Isoelectric Point (pI)

22.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	169 - 213	1.2e-08	PPR repeat family
TPR_24	PF23276	180 - 293	4.1e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	196 - 229	1.3e-06	PPR repeat
PPR_2	PF13041	208 - 249	4.3e-10	PPR repeat family
PPR_3	PF13812	223 - 279	5.6e-07	Pentatricopeptide repeat domain
PPR_long	PF17177	225 - 333	2.5e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	232 - 263	2.1e-12	PPR repeat
PPR_2	PF13041	235 - 284	1.3e-15	PPR repeat family
PPR	PF01535	238 - 268	4.3e-06	PPR repeat
PPR_1	PF12854	266 - 298	8.2e-09	PPR repeat
PPR_2	PF13041	273 - 319	1.6e-13	PPR repeat family
PPR_1	PF12854	301 - 332	1.5e-10	PPR repeat
PPR_2	PF13041	336 - 386	1e-14	PPR repeat family
TPR_24	PF23276	365 - 470	1.8e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	367 - 416	6.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	368 - 401	6.7e-12	PPR repeat
PPR_2	PF13041	373 - 421	1.1e-18	PPR repeat family
PPR	PF01535	375 - 405	1.5e-06	PPR repeat
PPR_1	PF12854	403 - 436	6.7e-15	PPR repeat
PPR	PF01535	410 - 440	4.3e-07	PPR repeat
TPR_24	PF23276	411 - 504	8.9e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	431 - 486	5.8e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	438 - 469	1.5e-10	PPR repeat
PPR_2	PF13041	443 - 491	1.1e-17	PPR repeat family
PPR	PF01535	447 - 475	7.4e-09	PPR repeat
PPR_long	PF17177	455 - 583	5.2e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	473 - 505	4.3e-09	PPR repeat
PPR_2	PF13041	478 - 516	3.5e-08	PPR repeat family
PPR	PF01535	480 - 510	9.5e-07	PPR repeat
PPR_1	PF12854	509 - 540	3.2e-07	PPR repeat
PPR_2	PF13041	513 - 561	3.9e-17	PPR repeat family
PPR	PF01535	515 - 545	3.6e-07	PPR repeat
PPR_1	PF12854	543 - 575	5.3e-11	PPR repeat
PPR	PF01535	550 - 579	1.6e-07	PPR repeat
PPR_2	PF13041	550 - 584	3.6e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64320
fragaria_vesca	FvH4_5g29651 FvH4_5g29651
malus_domestica	MD02G1307900.v1.1
prunus_persica	Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1
pyrus_communis	pycom02g25910
rosa_chinensis	RchiOBHm_Chr7g0222741
rosa_laevigata	RLG00000002027
rosa_multiflora	Rmu_sc0007870.1_g000004 Rmu_sc0025009.1_g000002
rosa_roxburghii	Rroxscaffold_3G00236510
rosa_rugosa	Rorug07G0212100 Rorug07G0212200 Rorug07G0212200
rosa_samantha	Rh7AG356400 Rh7BG344800 Rh7CG373900 Rh7DG350700
rosa_wichuraiana	Rw7G030240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	510, 1551, 1866, 1971
AccB1I	GGYRCC	2 cut(s)	260, 556
AccBSI	CCGCTC	1 cut(s)	754
AccII	CGCG	2 cut(s)	323, 1839
AccIII	TCCGGA	1 cut(s)	162
AciI	CCGC	5 cut(s)	323, 326, 754, 901, 1839
AcuI	CTGAAG	5 cut(s)	393, 647, 1259, 1622, 1962
AfaI	GTAC	1 cut(s)	1505
AfiI	CCNNNNNNNGG	4 cut(s)	270, 348, 553, 1659
AflII	CTTAAG	1 cut(s)	137
AflIII	ACRYGT	1 cut(s)	576
AgsI	TTSAA	8 cut(s)	47, 179, 212, 1132, 1393, 1697, 1718, 1918
AjiI	CACGTC	1 cut(s)	2073
AjuI	GAANNNNNNNTTGG	4 cut(s)	181, 213, 1151, 1183
AleI	CACNNNNGTG	1 cut(s)	696
AloI	GAACNNNNNNTCC	2 cut(s)	773, 805
Alw21I	GWGCWC	1 cut(s)	162
Alw26I	GTCTC	3 cut(s)	598, 672, 848
AlwNI	CAGNNNCTG	1 cut(s)	872
Aor13HI	TCCGGA	1 cut(s)	162
AoxI	GGCC	3 cut(s)	339, 852, 1777
ApeKI	GCWGC	3 cut(s)	457, 872, 1212
AseI	ATTAAT	2 cut(s)	1559, 1773
AspLEI	GCGC	1 cut(s)	323
AsuC2I	CCSGG	1 cut(s)	441
AsuHPI	GGTGA	3 cut(s)	59, 175, 769
AsuII	TTCGAA	1 cut(s)	249
BaeGI	GKGCMC	3 cut(s)	231, 265, 705
BanI	GGYRCC	2 cut(s)	260, 556
BanII	GRGCYC	1 cut(s)	162
BauI	CACGAG	1 cut(s)	1179
Bbv12I	GWGCWC	1 cut(s)	162
BbvI	GCAGC	3 cut(s)	444, 859, 1199
BccI	CCATC	6 cut(s)	373, 790, 1192, 1244, 1477, 1888
BceAI	ACGGC	2 cut(s)	439, 1120
BcgI	CGANNNNNNTGC	2 cut(s)	997, 1031
BciVI	GTATCC	1 cut(s)	1331
BclI	TGATCA	2 cut(s)	1032, 1980
BcnI	CCSGG	1 cut(s)	441
BcoDI	GTCTC	3 cut(s)	598, 672, 848
BfaI	CTAG	5 cut(s)	989, 1002, 1097, 1284, 1691
BfmI	CTRYAG	3 cut(s)	742, 1678, 1783
BfrI	CTTAAG	1 cut(s)	137
BfuI	GTATCC	1 cut(s)	1331
BisI	GCNGC	4 cut(s)	324, 458, 873, 1213
BlsI	GCNGC	4 cut(s)	325, 459, 874, 1214
Bme1390I	CCNGG	1 cut(s)	441
BmgBI	CACGTC	1 cut(s)	2073
BmiI	GGNNCC	3 cut(s)	109, 262, 558
BmrFI	CCNGG	1 cut(s)	441
BmsI	GCATC	7 cut(s)	34, 348, 882, 1622, 1948, 2005, 2128
BpmI	CTGGAG	1 cut(s)	1599
Bpu14I	TTCGAA	1 cut(s)	249
BpuEI	CTTGAG	1 cut(s)	1832
BpuMI	CCSGG	1 cut(s)	441
BsaI	GGTCTC	1 cut(s)	848
BsaJI	CCNNGG	3 cut(s)	111, 549, 838
BsaWI	WCCGGW	1 cut(s)	162
BsaXI	ACNNNNNCTCC	6 cut(s)	107, 137, 198, 228, 773, 803
Bsc4I	CCNNNNNNNGG	4 cut(s)	270, 348, 553, 1659
Bse1I	ACTGG	3 cut(s)	225, 1050, 1582
Bse3DI	GCAATG	2 cut(s)	983, 1990
BseAI	TCCGGA	1 cut(s)	162
BseDI	CCNNGG	3 cut(s)	111, 549, 838
BseGI	GGATG	9 cut(s)	25, 229, 384, 529, 897, 1427, 1488, 1637, 1741
BseLI	CCNNNNNNNGG	4 cut(s)	270, 348, 553, 1659
BseMI	GCAATG	2 cut(s)	983, 1990
BseMII	CTCAG	1 cut(s)	87
BseNI	ACTGG	3 cut(s)	225, 1050, 1582
BseRI	GAGGAG	1 cut(s)	128
BseSI	GKGCMC	3 cut(s)	231, 265, 705
BseXI	GCAGC	3 cut(s)	444, 859, 1199
BseYI	CCCAGC	3 cut(s)	77, 536, 1685
Bsh1236I	CGCG	2 cut(s)	323, 1839
BshFI	GGCC	3 cut(s)	341, 854, 1779
BshNI	GGYRCC	2 cut(s)	260, 556
BsiHKAI	GWGCWC	1 cut(s)	162
BsiSI	CCGG	2 cut(s)	163, 440
BslFI	GGGAC	3 cut(s)	379, 1329, 1911
BslI	CCNNNNNNNGG	4 cut(s)	270, 348, 553, 1659
BsmAI	GTCTC	3 cut(s)	598, 672, 848
BsmFI	GGGAC	3 cut(s)	379, 1329, 1911
BsmI	GAATGC	2 cut(s)	867, 1015
BsnI	GGCC	3 cut(s)	341, 854, 1779
Bso31I	GGTCTC	1 cut(s)	848
Bsp119I	TTCGAA	1 cut(s)	249
Bsp1286I	GDGCHC	4 cut(s)	162, 231, 265, 705
Bsp13I	TCCGGA	1 cut(s)	162
Bsp143I	GATC	3 cut(s)	886, 1032, 1980
Bsp19I	CCATGG	1 cut(s)	838
BspACI	CCGC	5 cut(s)	323, 326, 754, 901, 1839
BspANI	GGCC	3 cut(s)	341, 854, 1779
BspCNI	CTCAG	1 cut(s)	86
BspEI	TCCGGA	1 cut(s)	162
BspFNI	CGCG	2 cut(s)	323, 1839
BspHI	TCATGA	1 cut(s)	1381
BspLI	GGNNCC	3 cut(s)	109, 262, 558
BspMAI	CTGCAG	3 cut(s)	746, 1682, 1787
BspT104I	TTCGAA	1 cut(s)	249
BspT107I	GGYRCC	2 cut(s)	260, 556
BspTI	CTTAAG	1 cut(s)	137
BspTNI	GGTCTC	1 cut(s)	848
BsrBI	CCGCTC	1 cut(s)	754
BsrDI	GCAATG	2 cut(s)	983, 1990
BsrI	ACTGG	3 cut(s)	225, 1050, 1582
BssECI	CCNNGG	3 cut(s)	111, 549, 838
BssMI	GATC	3 cut(s)	886, 1032, 1980
BssSI	CACGAG	1 cut(s)	1179
BssT1I	CCWWGG	2 cut(s)	549, 838
Bst2BI	CACGAG	1 cut(s)	1179
Bst4CI	ACNGT	2 cut(s)	104, 1543
Bst6I	CTCTTC	1 cut(s)	1482
BstAFI	CTTAAG	1 cut(s)	137
BstBI	TTCGAA	1 cut(s)	249
BstC8I	GCNNGC	6 cut(s)	433, 437, 664, 668, 1094, 1217
BstDEI	CTNAG	4 cut(s)	73, 201, 674, 1820
BstDSI	CCRYGG	1 cut(s)	838
BstF5I	GGATG	9 cut(s)	25, 229, 384, 529, 897, 1427, 1488, 1637, 1741
BstFNI	CGCG	2 cut(s)	323, 1839
BstHHI	GCGC	1 cut(s)	323
BstKTI	GATC	3 cut(s)	889, 1035, 1983
BstMAI	GTCTC	3 cut(s)	598, 672, 848
BstMBI	GATC	3 cut(s)	886, 1032, 1980
BstMWI	GCNNNNNNNGC	4 cut(s)	432, 1161, 1791, 2001
BstNSI	RCATGY	4 cut(s)	580, 666, 737, 1096
BstSCI	CCNGG	1 cut(s)	439
BstSFI	CTRYAG	3 cut(s)	742, 1678, 1783
BstSLI	GKGCMC	3 cut(s)	231, 265, 705
BstUI	CGCG	2 cut(s)	323, 1839
BstV1I	GCAGC	3 cut(s)	444, 859, 1199
BstXI	CCANNNNNNTGG	2 cut(s)	238, 712
BsuI	GTATCC	1 cut(s)	1331
BsuRI	GGCC	3 cut(s)	341, 854, 1779
BtgI	CCRYGG	1 cut(s)	838
BtgZI	GCGATG	1 cut(s)	1820
BtrI	CACGTC	1 cut(s)	2073
BtsCI	GGATG	9 cut(s)	25, 229, 384, 529, 897, 1427, 1488, 1637, 1741
BtsIMutI	CAGTG	7 cut(s)	109, 218, 1057, 1198, 1539, 1575, 1598
Cac8I	GCNNGC	6 cut(s)	433, 437, 664, 668, 1094, 1217
CaiI	CAGNNNCTG	1 cut(s)	872
CciI	TCATGA	1 cut(s)	1381
CfoI	GCGC	1 cut(s)	323
CseI	GACGC	1 cut(s)	1065
Csp6I	GTAC	1 cut(s)	1504
CviQI	GTAC	1 cut(s)	1504
DdeI	CTNAG	4 cut(s)	73, 201, 674, 1820
DpnI	GATC	3 cut(s)	888, 1034, 1982
DpnII	GATC	3 cut(s)	886, 1032, 1980
DraI	TTTAAA	1 cut(s)	1296
Eam1104I	CTCTTC	1 cut(s)	1482
EarI	CTCTTC	1 cut(s)	1482
Ecl136II	GAGCTC	1 cut(s)	160
Eco130I	CCWWGG	2 cut(s)	549, 838
Eco24I	GRGCYC	1 cut(s)	162
Eco31I	GGTCTC	1 cut(s)	848
Eco53kI	GAGCTC	1 cut(s)	160
Eco57I	CTGAAG	5 cut(s)	393, 647, 1259, 1622, 1962
EcoICRI	GAGCTC	1 cut(s)	160
EcoT14I	CCWWGG	2 cut(s)	549, 838
EcoT38I	GRGCYC	1 cut(s)	162
ErhI	CCWWGG	2 cut(s)	549, 838
FalI	AAGNNNNNCTT	2 cut(s)	1257, 1289
FaqI	GGGAC	3 cut(s)	379, 1329, 1911
FauI	CCCGC	3 cut(s)	319, 747, 894
FbaI	TGATCA	2 cut(s)	1032, 1980
Fnu4HI	GCNGC	4 cut(s)	324, 458, 873, 1213
FokI	GGATG	9 cut(s)	12, 236, 391, 536, 904, 1434, 1495, 1644, 1728
FriOI	GRGCYC	1 cut(s)	162
Fsp4HI	GCNGC	4 cut(s)	324, 458, 873, 1213
FspBI	CTAG	5 cut(s)	989, 1002, 1097, 1284, 1691
GlaI	GCGC	1 cut(s)	322
GluI	GCNGC	4 cut(s)	324, 458, 873, 1213
GsaI	CCCAGC	3 cut(s)	81, 540, 1689
GsuI	CTGGAG	1 cut(s)	1599
HaeIII	GGCC	3 cut(s)	341, 854, 1779
HapII	CCGG	2 cut(s)	163, 440
HgaI	GACGC	1 cut(s)	1065
HhaI	GCGC	1 cut(s)	323
Hin6I	GCGC	1 cut(s)	321
HinP1I	GCGC	1 cut(s)	321
HincII	GTYRAC	1 cut(s)	1271
HindII	GTYRAC	1 cut(s)	1271
HindIII	AAGCTT	3 cut(s)	1386, 1604, 1911
HinfI	GANTC	8 cut(s)	392, 656, 724, 1141, 1317, 1831, 1918, 2052
HpaII	CCGG	2 cut(s)	163, 440
HphI	GGTGA	3 cut(s)	59, 175, 769
Hpy166II	GTNNAC	4 cut(s)	718, 1055, 1148, 1271
Hpy188I	TCNGA	6 cut(s)	112, 627, 819, 891, 1140, 1326
Hpy8I	GTNNAC	4 cut(s)	718, 1055, 1148, 1271
HpyAV	CCTTC	5 cut(s)	368, 622, 1153, 1259, 1937
HpyCH4III	ACNGT	2 cut(s)	104, 1543
HpyCH4IV	ACGT	1 cut(s)	2072
HpyF10VI	GCNNNNNNNGC	4 cut(s)	432, 1161, 1791, 2001
HpyF3I	CTNAG	4 cut(s)	73, 201, 674, 1820
HpySE526I	ACGT	1 cut(s)	2072
HspAI	GCGC	1 cut(s)	321
Kpn2I	TCCGGA	1 cut(s)	162
Ksp22I	TGATCA	2 cut(s)	1032, 1980
Kzo9I	GATC	3 cut(s)	886, 1032, 1980
LmnI	GCTCC	1 cut(s)	165
Lsp1109I	GCAGC	3 cut(s)	444, 859, 1199
LweI	GCATC	7 cut(s)	34, 348, 882, 1622, 1948, 2005, 2128
MaeI	CTAG	5 cut(s)	989, 1002, 1097, 1284, 1691
MaeII	ACGT	1 cut(s)	2072
MaeIII	GTNAC	9 cut(s)	204, 1045, 1100, 1109, 1543, 1858, 2041, 2068, 2111
MalI	GATC	3 cut(s)	888, 1034, 1982
MbiI	CCGCTC	1 cut(s)	754
MboI	GATC	3 cut(s)	886, 1032, 1980
MboII	GAAGA	2 cut(s)	1499, 1730
MhlI	GDGCHC	4 cut(s)	162, 231, 265, 705
MluCI	AATT	7 cut(s)	189, 541, 706, 1184, 1342, 1447, 1560
MlyI	GAGTC	3 cut(s)	401, 718, 1311
MroI	TCCGGA	1 cut(s)	162
MslI	CAYNNNNRTG	2 cut(s)	696, 2037
MspA1I	CMGCKG	1 cut(s)	77
MspCI	CTTAAG	1 cut(s)	137
MspI	CCGG	2 cut(s)	163, 440
MspR9I	CCNGG	1 cut(s)	441
Mva1269I	GAATGC	2 cut(s)	867, 1015
MvnI	CGCG	2 cut(s)	323, 1839
MwoI	GCNNNNNNNGC	4 cut(s)	432, 1161, 1791, 2001
NciI	CCSGG	1 cut(s)	441
NcoI	CCATGG	1 cut(s)	838
NdeII	GATC	3 cut(s)	886, 1032, 1980
NlaIV	GGNNCC	3 cut(s)	109, 262, 558
NmeAIII	GCCGAG	2 cut(s)	297, 433
NmuCI	GTSAC	4 cut(s)	1109, 1858, 2041, 2068
NspI	RCATGY	4 cut(s)	580, 666, 737, 1096
NspV	TTCGAA	1 cut(s)	249
OliI	CACNNNNGTG	1 cut(s)	696
PaeI	GCATGC	2 cut(s)	666, 1096
PagI	TCATGA	1 cut(s)	1381
PciI	ACATGT	1 cut(s)	576
PctI	GAATGC	2 cut(s)	867, 1015
PfeI	GAWTC	5 cut(s)	656, 1141, 1831, 1918, 2052
PflFI	GACNNNGTC	2 cut(s)	1320, 1856
PkrI	GCNGC	4 cut(s)	325, 459, 874, 1214
PleI	GAGTC	3 cut(s)	400, 718, 1311
PpsI	GAGTC	3 cut(s)	400, 718, 1311
PscI	ACATGT	1 cut(s)	576
PshBI	ATTAAT	2 cut(s)	1559, 1773
PsiI	TTATAA	4 cut(s)	510, 1551, 1866, 1971
Psp124BI	GAGCTC	1 cut(s)	162
PspFI	CCCAGC	3 cut(s)	77, 536, 1685
PspN4I	GGNNCC	3 cut(s)	109, 262, 558
PstI	CTGCAG	3 cut(s)	746, 1682, 1787
PstNI	CAGNNNCTG	1 cut(s)	872
PsyI	GACNNNGTC	2 cut(s)	1320, 1856
PvuII	CAGCTG	1 cut(s)	77
RsaI	GTAC	1 cut(s)	1505
RsaNI	GTAC	1 cut(s)	1504
RseI	CAYNNNNRTG	2 cut(s)	696, 2037
SacI	GAGCTC	1 cut(s)	162
SatI	GCNGC	4 cut(s)	324, 458, 873, 1213
Sau3AI	GATC	3 cut(s)	886, 1032, 1980
SchI	GAGTC	3 cut(s)	401, 718, 1311
ScrFI	CCNGG	1 cut(s)	441
SduI	GDGCHC	4 cut(s)	162, 231, 265, 705
SfaNI	GCATC	7 cut(s)	34, 348, 882, 1622, 1948, 2005, 2128
SfcI	CTRYAG	3 cut(s)	742, 1678, 1783
SfuI	TTCGAA	1 cut(s)	249
SmiMI	CAYNNNNRTG	2 cut(s)	696, 2037
SmlI	CTYRAG	2 cut(s)	137, 1811
SmoI	CTYRAG	2 cut(s)	137, 1811
SphI	GCATGC	2 cut(s)	666, 1096
Sse9I	AATT	7 cut(s)	189, 541, 706, 1184, 1342, 1447, 1560
SsiI	CCGC	5 cut(s)	323, 326, 754, 901, 1839
SspI	AATATT	3 cut(s)	1135, 1242, 1765
SspMI	CTAG	5 cut(s)	989, 1002, 1097, 1284, 1691
SstI	GAGCTC	1 cut(s)	162
StyD4I	CCNGG	1 cut(s)	439
StyI	CCWWGG	2 cut(s)	549, 838
TaaI	ACNGT	2 cut(s)	104, 1543
TaiI	ACGT	1 cut(s)	2075
TaqI	TCGA	2 cut(s)	249, 465
TaqII	GACCGA	1 cut(s)	1310
TasI	AATT	7 cut(s)	189, 541, 706, 1184, 1342, 1447, 1560
TauI	GCSGC	1 cut(s)	326
TfiI	GAWTC	5 cut(s)	656, 1141, 1831, 1918, 2052
TscAI	CASTG	7 cut(s)	109, 225, 1057, 1198, 1546, 1582, 1605
TseFI	GTSAC	4 cut(s)	1109, 1858, 2041, 2068
TseI	GCWGC	3 cut(s)	457, 872, 1212
Tsp45I	GTSAC	4 cut(s)	1109, 1858, 2041, 2068
TspGWI	ACGGA	1 cut(s)	960
TspRI	CASTG	7 cut(s)	109, 225, 1057, 1198, 1546, 1582, 1605
Tth111I	GACNNNGTC	2 cut(s)	1320, 1856
Vha464I	CTTAAG	1 cut(s)	137
VspI	ATTAAT	2 cut(s)	1559, 1773
XceI	RCATGY	4 cut(s)	580, 666, 737, 1096
XspI	CTAG	5 cut(s)	989, 1002, 1097, 1284, 1691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.