Pentatricopeptide repeat-containing protein At5g64320
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G64320 |
| fragaria_vesca | FvH4_5g29651 FvH4_5g29651 |
| malus_domestica | MD02G1307900.v1.1 |
| prunus_persica | Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 |
| pyrus_communis | pycom02g25910 |
| rosa_chinensis | RchiOBHm_Chr7g0222741 |
| rosa_laevigata | RLG00000002027 |
| rosa_multiflora | Rmu_sc0007870.1_g000004 Rmu_sc0025009.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00236510 |
| rosa_rugosa | Rorug07G0212100 Rorug07G0212200 Rorug07G0212200 |
| rosa_samantha | Rh7AG356400 Rh7BG344800 Rh7CG373900 Rh7DG350700 |
| rosa_wichuraiana | Rw7G030240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1563, 1878, 1983 |
| AccB1I | GGYRCC | 2 cut(s) | 272, 568 |
| AccBSI | CCGCTC | 1 cut(s) | 443 |
| AccI | GTMKAC | 1 cut(s) | 1092 |
| AccII | CGCG | 2 cut(s) | 335, 1851 |
| AciI | CCGC | 5 cut(s) | 335, 338, 443, 913, 1851 |
| AclWI | GGATC | 1 cut(s) | 1594 |
| AcsI | RAATTY | 2 cut(s) | 9, 718 |
| AcuI | CTGAAG | 3 cut(s) | 659, 1634, 1974 |
| AfaI | GTAC | 2 cut(s) | 308, 1517 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 565, 1671 |
| AflII | CTTAAG | 1 cut(s) | 149 |
| AflIII | ACRYGT | 1 cut(s) | 588 |
| AgsI | TTSAA | 7 cut(s) | 191, 224, 503, 514, 1036, 1730, 1930 |
| AjiI | CACGTC | 3 cut(s) | 238, 246, 2085 |
| AjnI | CCWGG | 1 cut(s) | 451 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 785, 817 |
| Alw26I | GTCTC | 3 cut(s) | 684, 778, 860 |
| AlwI | GGATC | 1 cut(s) | 1594 |
| AoxI | GGCC | 2 cut(s) | 864, 1789 |
| ApeKI | GCWGC | 3 cut(s) | 469, 884, 1224 |
| ApoI | RAATTY | 2 cut(s) | 9, 718 |
| AseI | ATTAAT | 4 cut(s) | 1047, 1571, 1785, 2022 |
| AspLEI | GCGC | 1 cut(s) | 335 |
| AspS9I | GGNCC | 2 cut(s) | 1334, 1390 |
| AsuHPI | GGTGA | 2 cut(s) | 56, 1310 |
| AsuII | TTCGAA | 1 cut(s) | 261 |
| AvaII | GGWCC | 2 cut(s) | 1334, 1390 |
| AxyI | CCTNAGG | 1 cut(s) | 1832 |
| BaeGI | GKGCMC | 2 cut(s) | 243, 277 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1342, 1375 |
| BanI | GGYRCC | 2 cut(s) | 272, 568 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1269, 1301 |
| BauI | CACGAG | 2 cut(s) | 1191, 1768 |
| BbvI | GCAGC | 3 cut(s) | 456, 896, 1211 |
| BccI | CCATC | 8 cut(s) | 385, 802, 1094, 1204, 1376, 1489, 1900, 2139 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 451, 485, 1009, 1043 |
| BciT130I | CCWGG | 1 cut(s) | 453 |
| BciVI | GTATCC | 1 cut(s) | 1343 |
| BclI | TGATCA | 3 cut(s) | 54, 420, 1992 |
| BcoDI | GTCTC | 3 cut(s) | 684, 778, 860 |
| BfaI | CTAG | 3 cut(s) | 465, 1014, 1638 |
| BfmI | CTRYAG | 3 cut(s) | 1286, 1690, 1704 |
| BfrI | CTTAAG | 1 cut(s) | 149 |
| BfuI | GTATCC | 1 cut(s) | 1343 |
| BisI | GCNGC | 4 cut(s) | 336, 470, 885, 1225 |
| BlsI | GCNGC | 4 cut(s) | 337, 471, 886, 1226 |
| Bme1390I | CCNGG | 1 cut(s) | 453 |
| Bme18I | GGWCC | 2 cut(s) | 1334, 1390 |
| BmgBI | CACGTC | 3 cut(s) | 238, 246, 2085 |
| BmgT120I | GGNCC | 2 cut(s) | 1334, 1390 |
| BmiI | GGNNCC | 2 cut(s) | 274, 570 |
| BmrFI | CCNGG | 1 cut(s) | 453 |
| BmrI | ACTGGG | 1 cut(s) | 194 |
| BmsI | GCATC | 8 cut(s) | 34, 360, 612, 894, 1252, 1634, 1960, 2017 |
| BmuI | ACTGGG | 1 cut(s) | 194 |
| BpmI | CTGGAG | 2 cut(s) | 739, 1611 |
| Bpu14I | TTCGAA | 1 cut(s) | 261 |
| BpuEI | CTTGAG | 2 cut(s) | 1408, 1844 |
| BsaI | GGTCTC | 1 cut(s) | 860 |
| BsaJI | CCNNGG | 2 cut(s) | 561, 850 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 210, 240, 785, 815 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 565, 1671 |
| Bse1I | ACTGG | 4 cut(s) | 200, 546, 1062, 1594 |
| Bse21I | CCTNAGG | 1 cut(s) | 1832 |
| Bse3DI | GCAATG | 2 cut(s) | 112, 2002 |
| BseBI | CCWGG | 1 cut(s) | 453 |
| BseDI | CCNNGG | 2 cut(s) | 561, 850 |
| BseGI | GGATG | 8 cut(s) | 25, 396, 909, 1387, 1439, 1500, 1649, 1753 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 565, 1671 |
| BseMI | GCAATG | 2 cut(s) | 112, 2002 |
| BseMII | CTCAG | 1 cut(s) | 96 |
| BseNI | ACTGG | 4 cut(s) | 200, 546, 1062, 1594 |
| BseSI | GKGCMC | 2 cut(s) | 243, 277 |
| BseXI | GCAGC | 3 cut(s) | 456, 896, 1211 |
| BseYI | CCCAGC | 4 cut(s) | 86, 548, 1108, 1697 |
| Bsh1236I | CGCG | 2 cut(s) | 335, 1851 |
| BshFI | GGCC | 2 cut(s) | 866, 1791 |
| BshNI | GGYRCC | 2 cut(s) | 272, 568 |
| BslFI | GGGAC | 1 cut(s) | 1923 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 565, 1671 |
| BsmAI | GTCTC | 3 cut(s) | 684, 778, 860 |
| BsmFI | GGGAC | 1 cut(s) | 1923 |
| BsmI | GAATGC | 1 cut(s) | 1027 |
| BsnI | GGCC | 2 cut(s) | 866, 1791 |
| Bso31I | GGTCTC | 1 cut(s) | 860 |
| Bsp119I | TTCGAA | 1 cut(s) | 261 |
| Bsp1286I | GDGCHC | 2 cut(s) | 243, 277 |
| Bsp143I | GATC | 5 cut(s) | 54, 420, 898, 1599, 1992 |
| Bsp19I | CCATGG | 1 cut(s) | 850 |
| BspACI | CCGC | 5 cut(s) | 335, 338, 443, 913, 1851 |
| BspANI | GGCC | 2 cut(s) | 866, 1791 |
| BspCNI | CTCAG | 1 cut(s) | 95 |
| BspFNI | CGCG | 2 cut(s) | 335, 1851 |
| BspHI | TCATGA | 1 cut(s) | 423 |
| BspLI | GGNNCC | 2 cut(s) | 274, 570 |
| BspMAI | CTGCAG | 1 cut(s) | 1694 |
| BspPI | GGATC | 1 cut(s) | 1594 |
| BspT104I | TTCGAA | 1 cut(s) | 261 |
| BspT107I | GGYRCC | 2 cut(s) | 272, 568 |
| BspTI | CTTAAG | 1 cut(s) | 149 |
| BspTNI | GGTCTC | 1 cut(s) | 860 |
| BsrBI | CCGCTC | 1 cut(s) | 443 |
| BsrDI | GCAATG | 2 cut(s) | 112, 2002 |
| BsrI | ACTGG | 4 cut(s) | 200, 546, 1062, 1594 |
| BssECI | CCNNGG | 2 cut(s) | 561, 850 |
| BssMI | GATC | 5 cut(s) | 54, 420, 898, 1599, 1992 |
| BssSI | CACGAG | 2 cut(s) | 1191, 1768 |
| BssT1I | CCWWGG | 2 cut(s) | 561, 850 |
| Bst2BI | CACGAG | 2 cut(s) | 1191, 1768 |
| Bst2UI | CCWGG | 1 cut(s) | 453 |
| Bst4CI | ACNGT | 3 cut(s) | 68, 1097, 1555 |
| Bst6I | CTCTTC | 1 cut(s) | 1494 |
| BstAFI | CTTAAG | 1 cut(s) | 149 |
| BstBI | TTCGAA | 1 cut(s) | 261 |
| BstC8I | GCNNGC | 6 cut(s) | 445, 449, 676, 680, 1106, 1229 |
| BstDEI | CTNAG | 4 cut(s) | 82, 686, 1218, 1832 |
| BstDSI | CCRYGG | 1 cut(s) | 850 |
| BstF5I | GGATG | 8 cut(s) | 25, 396, 909, 1387, 1439, 1500, 1649, 1753 |
| BstFNI | CGCG | 2 cut(s) | 335, 1851 |
| BstHHI | GCGC | 1 cut(s) | 335 |
| BstKTI | GATC | 5 cut(s) | 57, 423, 901, 1602, 1995 |
| BstMAI | GTCTC | 3 cut(s) | 684, 778, 860 |
| BstMBI | GATC | 5 cut(s) | 54, 420, 898, 1599, 1992 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 444, 1173, 2013 |
| BstNI | CCWGG | 1 cut(s) | 453 |
| BstNSI | RCATGY | 5 cut(s) | 592, 678, 749, 980, 1108 |
| BstSCI | CCNGG | 1 cut(s) | 451 |
| BstSFI | CTRYAG | 3 cut(s) | 1286, 1690, 1704 |
| BstSLI | GKGCMC | 2 cut(s) | 243, 277 |
| BstUI | CGCG | 2 cut(s) | 335, 1851 |
| BstV1I | GCAGC | 3 cut(s) | 456, 896, 1211 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 21, 250 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1832 |
| BsuI | GTATCC | 1 cut(s) | 1343 |
| BsuRI | GGCC | 2 cut(s) | 866, 1791 |
| BtgI | CCRYGG | 1 cut(s) | 850 |
| BtgZI | GCGATG | 1 cut(s) | 1832 |
| BtrI | CACGTC | 3 cut(s) | 238, 246, 2085 |
| BtsCI | GGATG | 8 cut(s) | 25, 396, 909, 1387, 1439, 1500, 1649, 1753 |
| BtsIMutI | CAGTG | 4 cut(s) | 1069, 1210, 1551, 1610 |
| Cac8I | GCNNGC | 6 cut(s) | 445, 449, 676, 680, 1106, 1229 |
| CciI | TCATGA | 1 cut(s) | 423 |
| CfoI | GCGC | 1 cut(s) | 335 |
| Cfr13I | GGNCC | 2 cut(s) | 1334, 1390 |
| CseI | GACGC | 1 cut(s) | 1077 |
| Csp6I | GTAC | 2 cut(s) | 307, 1516 |
| CviQI | GTAC | 2 cut(s) | 307, 1516 |
| DdeI | CTNAG | 4 cut(s) | 82, 686, 1218, 1832 |
| DpnI | GATC | 5 cut(s) | 56, 422, 900, 1601, 1994 |
| DpnII | GATC | 5 cut(s) | 54, 420, 898, 1599, 1992 |
| DraI | TTTAAA | 2 cut(s) | 1308, 1404 |
| Eam1104I | CTCTTC | 1 cut(s) | 1494 |
| EarI | CTCTTC | 1 cut(s) | 1494 |
| Eco130I | CCWWGG | 2 cut(s) | 561, 850 |
| Eco31I | GGTCTC | 1 cut(s) | 860 |
| Eco47I | GGWCC | 2 cut(s) | 1334, 1390 |
| Eco57I | CTGAAG | 3 cut(s) | 659, 1634, 1974 |
| Eco81I | CCTNAGG | 1 cut(s) | 1832 |
| EcoRI | GAATTC | 1 cut(s) | 718 |
| EcoRII | CCWGG | 1 cut(s) | 451 |
| EcoT14I | CCWWGG | 2 cut(s) | 561, 850 |
| ErhI | CCWWGG | 2 cut(s) | 561, 850 |
| FaqI | GGGAC | 1 cut(s) | 1923 |
| FauI | CCCGC | 3 cut(s) | 331, 436, 906 |
| FbaI | TGATCA | 3 cut(s) | 54, 420, 1992 |
| FblI | GTMKAC | 1 cut(s) | 1092 |
| Fnu4HI | GCNGC | 4 cut(s) | 336, 470, 885, 1225 |
| FokI | GGATG | 8 cut(s) | 12, 403, 916, 1394, 1446, 1507, 1656, 1740 |
| Fsp4HI | GCNGC | 4 cut(s) | 336, 470, 885, 1225 |
| FspBI | CTAG | 3 cut(s) | 465, 1014, 1638 |
| GlaI | GCGC | 1 cut(s) | 334 |
| GluI | GCNGC | 4 cut(s) | 336, 470, 885, 1225 |
| GsaI | CCCAGC | 4 cut(s) | 90, 552, 1112, 1701 |
| GsuI | CTGGAG | 2 cut(s) | 739, 1611 |
| HaeIII | GGCC | 2 cut(s) | 866, 1791 |
| HgaI | GACGC | 1 cut(s) | 1077 |
| HhaI | GCGC | 1 cut(s) | 335 |
| Hin6I | GCGC | 1 cut(s) | 333 |
| HinP1I | GCGC | 1 cut(s) | 333 |
| HincII | GTYRAC | 1 cut(s) | 1283 |
| HindII | GTYRAC | 1 cut(s) | 1283 |
| HindIII | AAGCTT | 4 cut(s) | 326, 1398, 1616, 1923 |
| HinfI | GANTC | 9 cut(s) | 122, 404, 668, 736, 874, 1153, 1843, 1930, 2064 |
| HphI | GGTGA | 2 cut(s) | 56, 1310 |
| Hpy166II | GTNNAC | 8 cut(s) | 307, 619, 730, 1067, 1093, 1160, 1283, 1393 |
| Hpy8I | GTNNAC | 8 cut(s) | 307, 619, 730, 1067, 1093, 1160, 1283, 1393 |
| HpyAV | CCTTC | 5 cut(s) | 380, 634, 1165, 1271, 1949 |
| HpyCH4III | ACNGT | 3 cut(s) | 68, 1097, 1555 |
| HpyCH4IV | ACGT | 3 cut(s) | 237, 245, 2084 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 444, 1173, 2013 |
| HpyF3I | CTNAG | 4 cut(s) | 82, 686, 1218, 1832 |
| HpySE526I | ACGT | 3 cut(s) | 237, 245, 2084 |
| HspAI | GCGC | 1 cut(s) | 333 |
| Ksp22I | TGATCA | 3 cut(s) | 54, 420, 1992 |
| Kzo9I | GATC | 5 cut(s) | 54, 420, 898, 1599, 1992 |
| LmnI | GCTCC | 1 cut(s) | 687 |
| Lsp1109I | GCAGC | 3 cut(s) | 456, 896, 1211 |
| LweI | GCATC | 8 cut(s) | 34, 360, 612, 894, 1252, 1634, 1960, 2017 |
| MaeI | CTAG | 3 cut(s) | 465, 1014, 1638 |
| MaeII | ACGT | 3 cut(s) | 237, 245, 2084 |
| MaeIII | GTNAC | 8 cut(s) | 216, 1057, 1112, 1121, 1555, 1870, 2053, 2080 |
| MalI | GATC | 5 cut(s) | 56, 422, 900, 1601, 1994 |
| MbiI | CCGCTC | 1 cut(s) | 443 |
| MboI | GATC | 5 cut(s) | 54, 420, 898, 1599, 1992 |
| MboII | GAAGA | 2 cut(s) | 1511, 1742 |
| MfeI | CAATTG | 1 cut(s) | 1354 |
| MhlI | GDGCHC | 2 cut(s) | 243, 277 |
| MluCI | AATT | 9 cut(s) | 9, 192, 263, 553, 718, 1196, 1354, 1459, 1572 |
| MlyI | GAGTC | 3 cut(s) | 131, 413, 730 |
| MslI | CAYNNNNRTG | 4 cut(s) | 248, 708, 981, 2049 |
| MspA1I | CMGCKG | 2 cut(s) | 86, 1119 |
| MspCI | CTTAAG | 1 cut(s) | 149 |
| MspR9I | CCNGG | 1 cut(s) | 453 |
| MunI | CAATTG | 1 cut(s) | 1354 |
| Mva1269I | GAATGC | 1 cut(s) | 1027 |
| MvaI | CCWGG | 1 cut(s) | 453 |
| MvnI | CGCG | 2 cut(s) | 335, 1851 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 444, 1173, 2013 |
| NcoI | CCATGG | 1 cut(s) | 850 |
| NdeII | GATC | 5 cut(s) | 54, 420, 898, 1599, 1992 |
| NlaIV | GGNNCC | 2 cut(s) | 274, 570 |
| NmuCI | GTSAC | 4 cut(s) | 1121, 1870, 2053, 2080 |
| NspI | RCATGY | 5 cut(s) | 592, 678, 749, 980, 1108 |
| NspV | TTCGAA | 1 cut(s) | 261 |
| PaeI | GCATGC | 2 cut(s) | 678, 1108 |
| PagI | TCATGA | 1 cut(s) | 423 |
| PciI | ACATGT | 1 cut(s) | 588 |
| PctI | GAATGC | 1 cut(s) | 1027 |
| PfeI | GAWTC | 6 cut(s) | 668, 874, 1153, 1843, 1930, 2064 |
| PkrI | GCNGC | 4 cut(s) | 337, 471, 886, 1226 |
| PleI | GAGTC | 3 cut(s) | 130, 412, 730 |
| PpsI | GAGTC | 3 cut(s) | 130, 412, 730 |
| PscI | ACATGT | 1 cut(s) | 588 |
| PshBI | ATTAAT | 4 cut(s) | 1047, 1571, 1785, 2022 |
| PsiI | TTATAA | 3 cut(s) | 1563, 1878, 1983 |
| Psp6I | CCWGG | 1 cut(s) | 451 |
| PspFI | CCCAGC | 4 cut(s) | 86, 548, 1108, 1697 |
| PspGI | CCWGG | 1 cut(s) | 451 |
| PspN4I | GGNNCC | 2 cut(s) | 274, 570 |
| PspPI | GGNCC | 2 cut(s) | 1334, 1390 |
| PstI | CTGCAG | 1 cut(s) | 1694 |
| PvuII | CAGCTG | 2 cut(s) | 86, 1119 |
| RsaI | GTAC | 2 cut(s) | 308, 1517 |
| RsaNI | GTAC | 2 cut(s) | 307, 1516 |
| RseI | CAYNNNNRTG | 4 cut(s) | 248, 708, 981, 2049 |
| SatI | GCNGC | 4 cut(s) | 336, 470, 885, 1225 |
| Sau3AI | GATC | 5 cut(s) | 54, 420, 898, 1599, 1992 |
| Sau96I | GGNCC | 2 cut(s) | 1334, 1390 |
| SchI | GAGTC | 3 cut(s) | 131, 413, 730 |
| ScrFI | CCNGG | 1 cut(s) | 453 |
| SduI | GDGCHC | 2 cut(s) | 243, 277 |
| SfaNI | GCATC | 8 cut(s) | 34, 360, 612, 894, 1252, 1634, 1960, 2017 |
| SfcI | CTRYAG | 3 cut(s) | 1286, 1690, 1704 |
| SfuI | TTCGAA | 1 cut(s) | 261 |
| SinI | GGWCC | 2 cut(s) | 1334, 1390 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 248, 708, 981, 2049 |
| SmlI | CTYRAG | 3 cut(s) | 149, 1423, 1823 |
| SmoI | CTYRAG | 3 cut(s) | 149, 1423, 1823 |
| SphI | GCATGC | 2 cut(s) | 678, 1108 |
| Sse9I | AATT | 9 cut(s) | 9, 192, 263, 553, 718, 1196, 1354, 1459, 1572 |
| SsiI | CCGC | 5 cut(s) | 335, 338, 443, 913, 1851 |
| SspI | AATATT | 2 cut(s) | 258, 1777 |
| SspMI | CTAG | 3 cut(s) | 465, 1014, 1638 |
| StyD4I | CCNGG | 1 cut(s) | 451 |
| StyI | CCWWGG | 2 cut(s) | 561, 850 |
| TaaI | ACNGT | 3 cut(s) | 68, 1097, 1555 |
| TaiI | ACGT | 3 cut(s) | 240, 248, 2087 |
| TaqI | TCGA | 1 cut(s) | 261 |
| TasI | AATT | 9 cut(s) | 9, 192, 263, 553, 718, 1196, 1354, 1459, 1572 |
| TatI | WGTACW | 1 cut(s) | 306 |
| TauI | GCSGC | 1 cut(s) | 338 |
| TfiI | GAWTC | 6 cut(s) | 668, 874, 1153, 1843, 1930, 2064 |
| TscAI | CASTG | 4 cut(s) | 1069, 1210, 1558, 1617 |
| TseFI | GTSAC | 4 cut(s) | 1121, 1870, 2053, 2080 |
| TseI | GCWGC | 3 cut(s) | 469, 884, 1224 |
| Tsp45I | GTSAC | 4 cut(s) | 1121, 1870, 2053, 2080 |
| TspGWI | ACGGA | 1 cut(s) | 972 |
| TspRI | CASTG | 4 cut(s) | 1069, 1210, 1558, 1617 |
| Vha464I | CTTAAG | 1 cut(s) | 149 |
| VpaK11BI | GGWCC | 2 cut(s) | 1334, 1390 |
| VspI | ATTAAT | 4 cut(s) | 1047, 1571, 1785, 2022 |
| XapI | RAATTY | 2 cut(s) | 9, 718 |
| XbaI | TCTAGA | 1 cut(s) | 1637 |
| XceI | RCATGY | 5 cut(s) | 592, 678, 749, 980, 1108 |
| XmiI | GTMKAC | 1 cut(s) | 1092 |
| XspI | CTAG | 3 cut(s) | 465, 1014, 1638 |