Pentatricopeptide repeat-containing protein At5g64320
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G64320 |
| fragaria_vesca | FvH4_5g29651 FvH4_5g29651 |
| malus_domestica | MD02G1307900.v1.1 |
| prunus_persica | Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 Prupe.4G007800_v2.0.a1 |
| pyrus_communis | pycom02g25910 |
| rosa_chinensis | RchiOBHm_Chr7g0222741 |
| rosa_laevigata | RLG00000002027 |
| rosa_multiflora | Rmu_sc0007870.1_g000004 Rmu_sc0025009.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00236510 |
| rosa_rugosa | Rorug07G0212100 Rorug07G0212200 Rorug07G0212200 |
| rosa_samantha | Rh7AG356400 Rh7BG344800 Rh7CG373900 Rh7DG350700 |
| rosa_wichuraiana | Rw7G030240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 537, 1893, 1998 |
| Acc16I | TGCGCA | 1 cut(s) | 291 |
| Acc36I | ACCTGC | 1 cut(s) | 449 |
| AccI | GTMKAC | 1 cut(s) | 633 |
| AciI | CCGC | 1 cut(s) | 350 |
| AclWI | GGATC | 1 cut(s) | 1609 |
| AcoI | YGGCCR | 1 cut(s) | 351 |
| AcsI | RAATTY | 1 cut(s) | 733 |
| AfaI | GTAC | 3 cut(s) | 323, 1367, 1545 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 111, 1303, 1540 |
| AflII | CTTAAG | 2 cut(s) | 164, 1628 |
| AflIII | ACRYGT | 1 cut(s) | 603 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1178, 1210 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 510, 542 |
| Alw26I | GTCTC | 2 cut(s) | 699, 793 |
| AlwI | GGATC | 1 cut(s) | 1609 |
| AoxI | GGCC | 5 cut(s) | 351, 1189, 1294, 1518, 1979 |
| ApeKI | GCWGC | 2 cut(s) | 484, 899 |
| ApoI | RAATTY | 1 cut(s) | 733 |
| AseI | ATTAAT | 3 cut(s) | 1586, 1590, 1800 |
| AspLEI | GCGC | 1 cut(s) | 292 |
| AspS9I | GGNCC | 2 cut(s) | 1189, 1294 |
| AsuC2I | CCSGG | 2 cut(s) | 355, 468 |
| AsuHPI | GGTGA | 1 cut(s) | 1325 |
| AxyI | CCTNAGG | 1 cut(s) | 1522 |
| BaeGI | GKGCMC | 1 cut(s) | 258 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1357, 1390 |
| BanII | GRGCYC | 2 cut(s) | 1248, 2082 |
| BauI | CACGAG | 2 cut(s) | 557, 1206 |
| BbsI | GAAGAC | 2 cut(s) | 16, 586 |
| BbvI | GCAGC | 2 cut(s) | 471, 911 |
| BccI | CCATC | 7 cut(s) | 259, 817, 1109, 1219, 1271, 1391, 1504 |
| BceAI | ACGGC | 2 cut(s) | 154, 1176 |
| BciVI | GTATCC | 2 cut(s) | 94, 676 |
| BclI | TGATCA | 1 cut(s) | 2007 |
| BcnI | CCSGG | 2 cut(s) | 355, 468 |
| BcoDI | GTCTC | 2 cut(s) | 699, 793 |
| BfaI | CTAG | 4 cut(s) | 480, 1029, 1124, 1605 |
| BfrI | CTTAAG | 2 cut(s) | 164, 1628 |
| BfuAI | ACCTGC | 1 cut(s) | 449 |
| BfuI | GTATCC | 2 cut(s) | 94, 676 |
| BisI | GCNGC | 3 cut(s) | 351, 485, 900 |
| BlsI | GCNGC | 3 cut(s) | 352, 486, 901 |
| Bme1390I | CCNGG | 2 cut(s) | 355, 468 |
| BmgT120I | GGNCC | 2 cut(s) | 1189, 1294 |
| BmrFI | CCNGG | 2 cut(s) | 355, 468 |
| BmsI | GCATC | 7 cut(s) | 150, 375, 909, 1649, 1822, 1863, 2032 |
| BpiI | GAAGAC | 2 cut(s) | 16, 586 |
| BpmI | CTGGAG | 3 cut(s) | 1322, 1568, 1734 |
| BpuEI | CTTGAG | 2 cut(s) | 1423, 1859 |
| BpuMI | CCSGG | 2 cut(s) | 355, 468 |
| BsaJI | CCNNGG | 1 cut(s) | 354 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 800, 830 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 111, 1303, 1540 |
| Bse1I | ACTGG | 4 cut(s) | 105, 1305, 1551, 2115 |
| Bse21I | CCTNAGG | 1 cut(s) | 1522 |
| Bse3DI | GCAATG | 2 cut(s) | 1450, 2017 |
| BseDI | CCNNGG | 1 cut(s) | 354 |
| BseGI | GGATG | 5 cut(s) | 924, 1402, 1664, 1768, 1980 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 111, 1303, 1540 |
| BseMI | GCAATG | 2 cut(s) | 1450, 2017 |
| BseMII | CTCAG | 2 cut(s) | 96, 692 |
| BseNI | ACTGG | 4 cut(s) | 105, 1305, 1551, 2115 |
| BseRI | GAGGAG | 1 cut(s) | 2156 |
| BseSI | GKGCMC | 1 cut(s) | 258 |
| BseX3I | CGGCCG | 1 cut(s) | 351 |
| BseXI | GCAGC | 2 cut(s) | 471, 911 |
| BseYI | CCCAGC | 2 cut(s) | 86, 563 |
| Bsh1285I | CGRYCG | 1 cut(s) | 354 |
| BshFI | GGCC | 5 cut(s) | 353, 1191, 1296, 1520, 1981 |
| BsiEI | CGRYCG | 1 cut(s) | 354 |
| BsiSI | CCGG | 2 cut(s) | 354, 468 |
| BslFI | GGGAC | 3 cut(s) | 406, 1776, 1938 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 111, 1303, 1540 |
| BsmAI | GTCTC | 2 cut(s) | 699, 793 |
| BsmFI | GGGAC | 3 cut(s) | 406, 1776, 1938 |
| BsmI | GAATGC | 1 cut(s) | 307 |
| BsnI | GGCC | 5 cut(s) | 353, 1191, 1296, 1520, 1981 |
| Bsp1286I | GDGCHC | 3 cut(s) | 258, 1248, 2082 |
| Bsp143I | GATC | 4 cut(s) | 530, 913, 1614, 2007 |
| BspACI | CCGC | 1 cut(s) | 350 |
| BspANI | GGCC | 5 cut(s) | 353, 1191, 1296, 1520, 1981 |
| BspCNI | CTCAG | 2 cut(s) | 95, 693 |
| BspHI | TCATGA | 2 cut(s) | 892, 1408 |
| BspMI | ACCTGC | 1 cut(s) | 449 |
| BspPI | GGATC | 1 cut(s) | 1609 |
| BspQI | GCTCTTC | 1 cut(s) | 448 |
| BspTI | CTTAAG | 2 cut(s) | 164, 1628 |
| BsrDI | GCAATG | 2 cut(s) | 1450, 2017 |
| BsrI | ACTGG | 4 cut(s) | 105, 1305, 1551, 2115 |
| BssECI | CCNNGG | 1 cut(s) | 354 |
| BssMI | GATC | 4 cut(s) | 530, 913, 1614, 2007 |
| BssSI | CACGAG | 2 cut(s) | 557, 1206 |
| Bst2BI | CACGAG | 2 cut(s) | 557, 1206 |
| Bst4CI | ACNGT | 4 cut(s) | 68, 1086, 1535, 1570 |
| Bst6I | CTCTTC | 2 cut(s) | 448, 1509 |
| BstAFI | CTTAAG | 2 cut(s) | 164, 1628 |
| BstC8I | GCNNGC | 3 cut(s) | 691, 695, 1244 |
| BstDEI | CTNAG | 4 cut(s) | 82, 188, 701, 1522 |
| BstF5I | GGATG | 5 cut(s) | 924, 1402, 1664, 1768, 1980 |
| BstHHI | GCGC | 1 cut(s) | 292 |
| BstKTI | GATC | 4 cut(s) | 533, 916, 1617, 2010 |
| BstMAI | GTCTC | 2 cut(s) | 699, 793 |
| BstMBI | GATC | 4 cut(s) | 530, 913, 1614, 2007 |
| BstMCI | CGRYCG | 1 cut(s) | 354 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1188, 1293, 2028 |
| BstNSI | RCATGY | 2 cut(s) | 607, 764 |
| BstSCI | CCNGG | 2 cut(s) | 353, 466 |
| BstSLI | GKGCMC | 1 cut(s) | 258 |
| BstV1I | GCAGC | 2 cut(s) | 471, 911 |
| BstV2I | GAAGAC | 2 cut(s) | 16, 586 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 265 |
| BstZI | CGGCCG | 1 cut(s) | 351 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1522 |
| BsuI | GTATCC | 2 cut(s) | 94, 676 |
| BsuRI | GGCC | 5 cut(s) | 353, 1191, 1296, 1520, 1981 |
| BtsCI | GGATG | 5 cut(s) | 924, 1402, 1664, 1768, 1980 |
| BtsIMutI | CAGTG | 4 cut(s) | 64, 112, 744, 1566 |
| BveI | ACCTGC | 1 cut(s) | 449 |
| Cac8I | GCNNGC | 3 cut(s) | 691, 695, 1244 |
| CciI | TCATGA | 2 cut(s) | 892, 1408 |
| CfoI | GCGC | 1 cut(s) | 292 |
| Cfr13I | GGNCC | 2 cut(s) | 1189, 1294 |
| CseI | GACGC | 1 cut(s) | 1935 |
| Csp6I | GTAC | 3 cut(s) | 322, 1366, 1544 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 720, 755 |
| CviQI | GTAC | 3 cut(s) | 322, 1366, 1544 |
| DdeI | CTNAG | 4 cut(s) | 82, 188, 701, 1522 |
| DpnI | GATC | 4 cut(s) | 532, 915, 1616, 2009 |
| DpnII | GATC | 4 cut(s) | 530, 913, 1614, 2007 |
| DraI | TTTAAA | 4 cut(s) | 1323, 1419, 2058, 2128 |
| EaeI | YGGCCR | 1 cut(s) | 351 |
| EagI | CGGCCG | 1 cut(s) | 351 |
| Eam1104I | CTCTTC | 2 cut(s) | 448, 1509 |
| EarI | CTCTTC | 2 cut(s) | 448, 1509 |
| EclXI | CGGCCG | 1 cut(s) | 351 |
| Eco147I | AGGCCT | 1 cut(s) | 1520 |
| Eco24I | GRGCYC | 2 cut(s) | 1248, 2082 |
| Eco52I | CGGCCG | 1 cut(s) | 351 |
| Eco81I | CCTNAGG | 1 cut(s) | 1522 |
| EcoT22I | ATGCAT | 2 cut(s) | 972, 1156 |
| EcoT38I | GRGCYC | 2 cut(s) | 1248, 2082 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1611, 1643 |
| FaqI | GGGAC | 3 cut(s) | 406, 1776, 1938 |
| FbaI | TGATCA | 1 cut(s) | 2007 |
| FblI | GTMKAC | 1 cut(s) | 633 |
| Fnu4HI | GCNGC | 3 cut(s) | 351, 485, 900 |
| FokI | GGATG | 5 cut(s) | 931, 1409, 1671, 1755, 1987 |
| FriOI | GRGCYC | 2 cut(s) | 1248, 2082 |
| Fsp4HI | GCNGC | 3 cut(s) | 351, 485, 900 |
| FspBI | CTAG | 4 cut(s) | 480, 1029, 1124, 1605 |
| FspI | TGCGCA | 1 cut(s) | 291 |
| GlaI | GCGC | 1 cut(s) | 291 |
| GluI | GCNGC | 3 cut(s) | 351, 485, 900 |
| GsaI | CCCAGC | 2 cut(s) | 90, 567 |
| GsuI | CTGGAG | 3 cut(s) | 1322, 1568, 1734 |
| HaeIII | GGCC | 5 cut(s) | 353, 1191, 1296, 1520, 1981 |
| HapII | CCGG | 2 cut(s) | 354, 468 |
| HgaI | GACGC | 1 cut(s) | 1935 |
| HhaI | GCGC | 1 cut(s) | 292 |
| Hin6I | GCGC | 1 cut(s) | 290 |
| HinP1I | GCGC | 1 cut(s) | 290 |
| HindIII | AAGCTT | 4 cut(s) | 341, 1413, 1631, 1938 |
| HpaII | CCGG | 2 cut(s) | 354, 468 |
| HphI | GGTGA | 1 cut(s) | 1325 |
| Hpy166II | GTNNAC | 8 cut(s) | 322, 518, 634, 745, 936, 1082, 1139, 2051 |
| Hpy188III | TCNNGA | 6 cut(s) | 893, 941, 1208, 1409, 1600, 1667 |
| Hpy8I | GTNNAC | 8 cut(s) | 322, 518, 634, 745, 936, 1082, 1139, 2051 |
| HpyAV | CCTTC | 6 cut(s) | 289, 395, 571, 1180, 1753, 1964 |
| HpyCH4III | ACNGT | 4 cut(s) | 68, 1086, 1535, 1570 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1188, 1293, 2028 |
| HpyF3I | CTNAG | 4 cut(s) | 82, 188, 701, 1522 |
| HspAI | GCGC | 1 cut(s) | 290 |
| Ksp22I | TGATCA | 1 cut(s) | 2007 |
| Kzo9I | GATC | 4 cut(s) | 530, 913, 1614, 2007 |
| LguI | GCTCTTC | 1 cut(s) | 448 |
| LmnI | GCTCC | 2 cut(s) | 589, 1715 |
| Lsp1109I | GCAGC | 2 cut(s) | 471, 911 |
| LweI | GCATC | 7 cut(s) | 150, 375, 909, 1649, 1822, 1863, 2032 |
| MaeI | CTAG | 4 cut(s) | 480, 1029, 1124, 1605 |
| MaeIII | GTNAC | 8 cut(s) | 42, 94, 195, 231, 949, 1570, 1885, 1959 |
| MalI | GATC | 4 cut(s) | 532, 915, 1616, 2009 |
| MboI | GATC | 4 cut(s) | 530, 913, 1614, 2007 |
| MboII | GAAGA | 7 cut(s) | 21, 169, 465, 586, 917, 1526, 1757 |
| MhlI | GDGCHC | 3 cut(s) | 258, 1248, 2082 |
| MluCI | AATT | 9 cut(s) | 75, 216, 333, 568, 733, 1211, 1230, 1474, 1587 |
| MlyI | GAGTC | 6 cut(s) | 146, 428, 745, 883, 1170, 1485 |
| Mph1103I | ATGCAT | 2 cut(s) | 972, 1156 |
| MslI | CAYNNNNRTG | 2 cut(s) | 263, 723 |
| MspA1I | CMGCKG | 1 cut(s) | 86 |
| MspCI | CTTAAG | 2 cut(s) | 164, 1628 |
| MspI | CCGG | 2 cut(s) | 354, 468 |
| MspR9I | CCNGG | 2 cut(s) | 355, 468 |
| Mva1269I | GAATGC | 1 cut(s) | 307 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1188, 1293, 2028 |
| NciI | CCSGG | 2 cut(s) | 355, 468 |
| NdeII | GATC | 4 cut(s) | 530, 913, 1614, 2007 |
| NmuCI | GTSAC | 2 cut(s) | 195, 1885 |
| NsbI | TGCGCA | 1 cut(s) | 291 |
| NsiI | ATGCAT | 2 cut(s) | 972, 1156 |
| NspI | RCATGY | 2 cut(s) | 607, 764 |
| PacI | TTAATTAA | 1 cut(s) | 1590 |
| PagI | TCATGA | 2 cut(s) | 892, 1408 |
| PceI | AGGCCT | 1 cut(s) | 1520 |
| PciI | ACATGT | 1 cut(s) | 603 |
| PciSI | GCTCTTC | 1 cut(s) | 448 |
| PctI | GAATGC | 1 cut(s) | 307 |
| PfeI | GAWTC | 4 cut(s) | 1168, 1858, 1945, 2146 |
| PflFI | GACNNNGTC | 1 cut(s) | 1883 |
| PkrI | GCNGC | 3 cut(s) | 352, 486, 901 |
| PleI | GAGTC | 6 cut(s) | 145, 427, 745, 883, 1170, 1485 |
| PpsI | GAGTC | 6 cut(s) | 145, 427, 745, 883, 1170, 1485 |
| PscI | ACATGT | 1 cut(s) | 603 |
| PshBI | ATTAAT | 3 cut(s) | 1586, 1590, 1800 |
| PsiI | TTATAA | 3 cut(s) | 537, 1893, 1998 |
| PspFI | CCCAGC | 2 cut(s) | 86, 563 |
| PspPI | GGNCC | 2 cut(s) | 1189, 1294 |
| PsyI | GACNNNGTC | 1 cut(s) | 1883 |
| PvuII | CAGCTG | 1 cut(s) | 86 |
| RsaI | GTAC | 3 cut(s) | 323, 1367, 1545 |
| RsaNI | GTAC | 3 cut(s) | 322, 1366, 1544 |
| RseI | CAYNNNNRTG | 2 cut(s) | 263, 723 |
| SapI | GCTCTTC | 1 cut(s) | 448 |
| SatI | GCNGC | 3 cut(s) | 351, 485, 900 |
| Sau3AI | GATC | 4 cut(s) | 530, 913, 1614, 2007 |
| Sau96I | GGNCC | 2 cut(s) | 1189, 1294 |
| SchI | GAGTC | 6 cut(s) | 146, 428, 745, 883, 1170, 1485 |
| ScrFI | CCNGG | 2 cut(s) | 355, 468 |
| SduI | GDGCHC | 3 cut(s) | 258, 1248, 2082 |
| SfaNI | GCATC | 7 cut(s) | 150, 375, 909, 1649, 1822, 1863, 2032 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 263, 723 |
| SmlI | CTYRAG | 4 cut(s) | 164, 1438, 1628, 1838 |
| SmoI | CTYRAG | 4 cut(s) | 164, 1438, 1628, 1838 |
| Sse9I | AATT | 9 cut(s) | 75, 216, 333, 568, 733, 1211, 1230, 1474, 1587 |
| SseBI | AGGCCT | 1 cut(s) | 1520 |
| SsiI | CCGC | 1 cut(s) | 350 |
| SspI | AATATT | 3 cut(s) | 1039, 1357, 1792 |
| SspMI | CTAG | 4 cut(s) | 480, 1029, 1124, 1605 |
| StuI | AGGCCT | 1 cut(s) | 1520 |
| StyD4I | CCNGG | 2 cut(s) | 353, 466 |
| TaaI | ACNGT | 4 cut(s) | 68, 1086, 1535, 1570 |
| TaqI | TCGA | 3 cut(s) | 249, 263, 276 |
| TasI | AATT | 9 cut(s) | 75, 216, 333, 568, 733, 1211, 1230, 1474, 1587 |
| TatI | WGTACW | 1 cut(s) | 321 |
| TauI | GCSGC | 1 cut(s) | 353 |
| TfiI | GAWTC | 4 cut(s) | 1168, 1858, 1945, 2146 |
| TscAI | CASTG | 4 cut(s) | 71, 112, 744, 1573 |
| TseFI | GTSAC | 2 cut(s) | 195, 1885 |
| TseI | GCWGC | 2 cut(s) | 484, 899 |
| Tsp45I | GTSAC | 2 cut(s) | 195, 1885 |
| TspGWI | ACGGA | 1 cut(s) | 113 |
| TspRI | CASTG | 4 cut(s) | 71, 112, 744, 1573 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1883 |
| Vha464I | CTTAAG | 2 cut(s) | 164, 1628 |
| VspI | ATTAAT | 3 cut(s) | 1586, 1590, 1800 |
| XapI | RAATTY | 1 cut(s) | 733 |
| XceI | RCATGY | 2 cut(s) | 607, 764 |
| XmiI | GTMKAC | 1 cut(s) | 633 |
| XspI | CTAG | 4 cut(s) | 480, 1029, 1124, 1605 |
| Zsp2I | ATGCAT | 2 cut(s) | 972, 1156 |