branched-chain amino acid aminotransferase 5 branched-chain amino acid transaminase 5 (BCAT5)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G65770 AT5G65770 AT5G65770 AT5G65780 |
| fragaria_vesca | FvH4_1g18512 FvH4_1g18512 |
| malus_domestica | MD02G1191400.v1.1 MD15G1302600.v1.1 |
| prunus_persica | Prupe.6G214100_v2.0.a1 Prupe.6G214100_v2.0.a1 |
| pyrus_communis | pycom15g26560 |
| rosa_chinensis | RchiOBHm_Chr2g0109151 |
| rosa_laevigata | RLG00000017717 |
| rosa_multiflora | Rmu_sc0000186.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00134460 |
| rosa_rugosa | Rorug02G0157500 Rorug02G0157500 Rorug02G0157500 Rorug02G0157600 |
| rosa_samantha | Rh2AG209600 Rh2BG220000 Rh2CG212100 Rh2DG215700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1412 |
| Acc36I | ACCTGC | 1 cut(s) | 2358 |
| AccI | GTMKAC | 1 cut(s) | 1981 |
| AccII | CGCG | 3 cut(s) | 453, 561, 2981 |
| AciI | CCGC | 5 cut(s) | 50, 127, 736, 2609, 2756 |
| AclWI | GGATC | 2 cut(s) | 813, 2082 |
| AcsI | RAATTY | 4 cut(s) | 1306, 1589, 1781, 1921 |
| AcuI | CTGAAG | 8 cut(s) | 129, 381, 548, 567, 1029, 1578, 2234, 2526 |
| AcyI | GRCGYC | 3 cut(s) | 658, 1409, 2807 |
| AfaI | GTAC | 3 cut(s) | 46, 490, 2467 |
| AflII | CTTAAG | 3 cut(s) | 980, 1508, 1991 |
| AflIII | ACRYGT | 4 cut(s) | 505, 2020, 2858, 2979 |
| AgeI | ACCGGT | 1 cut(s) | 591 |
| AjnI | CCWGG | 1 cut(s) | 1386 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1188, 1220, 1865, 1897 |
| Alw26I | GTCTC | 9 cut(s) | 352, 961, 1147, 1469, 2147, 2334, 2657, 2858, 2936 |
| AlwI | GGATC | 2 cut(s) | 813, 2082 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 545 |
| Ama87I | CYCGRG | 1 cut(s) | 2331 |
| AoxI | GGCC | 2 cut(s) | 294, 1533 |
| ApaI | GGGCCC | 1 cut(s) | 1537 |
| ApeKI | GCWGC | 7 cut(s) | 179, 563, 748, 1393, 1396, 2269, 3008 |
| ApoI | RAATTY | 4 cut(s) | 1306, 1589, 1781, 1921 |
| AsiGI | ACCGGT | 1 cut(s) | 591 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1041 |
| AspLEI | GCGC | 5 cut(s) | 453, 455, 526, 561, 563 |
| AspS9I | GGNCC | 3 cut(s) | 1384, 1533, 1534 |
| AsuHPI | GGTGA | 4 cut(s) | 590, 1220, 2884, 2966 |
| AsuII | TTCGAA | 1 cut(s) | 894 |
| AvaI | CYCGRG | 1 cut(s) | 2331 |
| AvaII | GGWCC | 1 cut(s) | 1384 |
| AxyI | CCTNAGG | 2 cut(s) | 1076, 2769 |
| BaeGI | GKGCMC | 1 cut(s) | 1537 |
| BanII | GRGCYC | 1 cut(s) | 1537 |
| BbsI | GAAGAC | 6 cut(s) | 236, 264, 440, 903, 1203, 1425 |
| BbvI | GCAGC | 7 cut(s) | 166, 575, 760, 1380, 1408, 2281, 2995 |
| BccI | CCATC | 5 cut(s) | 1789, 2381, 2797, 2926, 2945 |
| BceAI | ACGGC | 3 cut(s) | 63, 1385, 2434 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 330, 364, 874, 908, 2153, 2187 |
| BciT130I | CCWGG | 1 cut(s) | 1388 |
| BcoDI | GTCTC | 9 cut(s) | 352, 961, 1147, 1469, 2147, 2334, 2657, 2858, 2936 |
| BfaI | CTAG | 9 cut(s) | 84, 206, 356, 423, 816, 1202, 2150, 2558, 2667 |
| BfmI | CTRYAG | 2 cut(s) | 1317, 1394 |
| BfrI | CTTAAG | 3 cut(s) | 980, 1508, 1991 |
| BfuAI | ACCTGC | 1 cut(s) | 2358 |
| BisI | GCNGC | 9 cut(s) | 51, 128, 180, 564, 749, 1394, 1397, 2270, 3009 |
| BlpI | GCTNAGC | 1 cut(s) | 1820 |
| BlsI | GCNGC | 9 cut(s) | 52, 129, 181, 565, 750, 1395, 1398, 2271, 3010 |
| BmcAI | AGTACT | 1 cut(s) | 490 |
| Bme1390I | CCNGG | 1 cut(s) | 1388 |
| Bme18I | GGWCC | 1 cut(s) | 1384 |
| BmeT110I | CYCGRG | 1 cut(s) | 2331 |
| BmgT120I | GGNCC | 3 cut(s) | 1384, 1533, 1534 |
| BmiI | GGNNCC | 1 cut(s) | 1535 |
| BmrFI | CCNGG | 1 cut(s) | 1388 |
| BmrI | ACTGGG | 1 cut(s) | 2979 |
| BmuI | ACTGGG | 1 cut(s) | 2979 |
| BpiI | GAAGAC | 6 cut(s) | 236, 264, 440, 903, 1203, 1425 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 941, 973 |
| BpmI | CTGGAG | 5 cut(s) | 1373, 1409, 1517, 2475, 2676 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1820 |
| Bpu14I | TTCGAA | 1 cut(s) | 894 |
| BpuEI | CTTGAG | 1 cut(s) | 1673 |
| Bsa29I | ATCGAT | 1 cut(s) | 158 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2961 |
| BsaHI | GRCGYC | 3 cut(s) | 658, 1409, 2807 |
| BsaJI | CCNNGG | 1 cut(s) | 2256 |
| BsaWI | WCCGGW | 1 cut(s) | 591 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 908, 938 |
| Bse118I | RCCGGY | 1 cut(s) | 591 |
| Bse1I | ACTGG | 1 cut(s) | 2974 |
| Bse21I | CCTNAGG | 2 cut(s) | 1076, 2769 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2961 |
| BseBI | CCWGG | 1 cut(s) | 1388 |
| BseCI | ATCGAT | 1 cut(s) | 158 |
| BseDI | CCNNGG | 1 cut(s) | 2256 |
| BseGI | GGATG | 7 cut(s) | 310, 400, 526, 778, 1363, 2053, 2341 |
| BseJI | GATNNNNATC | 1 cut(s) | 2961 |
| BseMII | CTCAG | 8 cut(s) | 204, 669, 1067, 1590, 2043, 2583, 2760, 2916 |
| BseNI | ACTGG | 1 cut(s) | 2974 |
| BsePI | GCGCGC | 2 cut(s) | 451, 559 |
| BseRI | GAGGAG | 5 cut(s) | 890, 1988, 2138, 2547, 2954 |
| BseSI | GKGCMC | 1 cut(s) | 1537 |
| BseXI | GCAGC | 7 cut(s) | 166, 575, 760, 1380, 1408, 2281, 2995 |
| BseYI | CCCAGC | 3 cut(s) | 140, 482, 2292 |
| Bsh1236I | CGCG | 3 cut(s) | 453, 561, 2981 |
| BshFI | GGCC | 2 cut(s) | 296, 1535 |
| BshTI | ACCGGT | 1 cut(s) | 591 |
| BshVI | ATCGAT | 1 cut(s) | 158 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2331 |
| BsiSI | CCGG | 1 cut(s) | 592 |
| BslFI | GGGAC | 1 cut(s) | 2610 |
| BsmAI | GTCTC | 9 cut(s) | 352, 961, 1147, 1469, 2147, 2334, 2657, 2858, 2936 |
| BsmBI | CGTCTC | 2 cut(s) | 1147, 2147 |
| BsmFI | GGGAC | 1 cut(s) | 2610 |
| BsnI | GGCC | 2 cut(s) | 296, 1535 |
| BsoBI | CYCGRG | 1 cut(s) | 2331 |
| Bsp119I | TTCGAA | 1 cut(s) | 894 |
| Bsp120I | GGGCCC | 1 cut(s) | 1533 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1537 |
| Bsp143I | GATC | 8 cut(s) | 159, 513, 646, 802, 818, 2064, 2074, 2844 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1820 |
| Bsp19I | CCATGG | 1 cut(s) | 2256 |
| BspACI | CCGC | 5 cut(s) | 50, 127, 736, 2609, 2756 |
| BspANI | GGCC | 2 cut(s) | 296, 1535 |
| BspCNI | CTCAG | 8 cut(s) | 205, 670, 1068, 1591, 2044, 2584, 2761, 2915 |
| BspDI | ATCGAT | 1 cut(s) | 158 |
| BspFNI | CGCG | 3 cut(s) | 453, 561, 2981 |
| BspHI | TCATGA | 1 cut(s) | 1785 |
| BspLI | GGNNCC | 1 cut(s) | 1535 |
| BspMAI | CTGCAG | 1 cut(s) | 1398 |
| BspMI | ACCTGC | 1 cut(s) | 2358 |
| BspPI | GGATC | 2 cut(s) | 813, 2082 |
| BspQI | GCTCTTC | 1 cut(s) | 734 |
| BspT104I | TTCGAA | 1 cut(s) | 894 |
| BspTI | CTTAAG | 3 cut(s) | 980, 1508, 1991 |
| BsrFI | RCCGGY | 1 cut(s) | 591 |
| BsrI | ACTGG | 1 cut(s) | 2974 |
| BssAI | RCCGGY | 1 cut(s) | 591 |
| BssECI | CCNNGG | 1 cut(s) | 2256 |
| BssHII | GCGCGC | 2 cut(s) | 451, 559 |
| BssMI | GATC | 8 cut(s) | 159, 513, 646, 802, 818, 2064, 2074, 2844 |
| BssNAI | GTATAC | 1 cut(s) | 1982 |
| BssNI | GRCGYC | 3 cut(s) | 658, 1409, 2807 |
| BssT1I | CCWWGG | 1 cut(s) | 2256 |
| Bst1107I | GTATAC | 1 cut(s) | 1982 |
| Bst2UI | CCWGG | 1 cut(s) | 1388 |
| Bst4CI | ACNGT | 6 cut(s) | 1337, 1986, 2371, 2601, 2839, 2992 |
| BstACI | GRCGYC | 3 cut(s) | 658, 1409, 2807 |
| BstAFI | CTTAAG | 3 cut(s) | 980, 1508, 1991 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 448, 461, 997, 2764 |
| BstBI | TTCGAA | 1 cut(s) | 894 |
| BstC8I | GCNNGC | 7 cut(s) | 453, 561, 746, 1024, 1554, 1842, 2756 |
| BstDSI | CCRYGG | 1 cut(s) | 2256 |
| BstEII | GGTNACC | 1 cut(s) | 2872 |
| BstF5I | GGATG | 7 cut(s) | 310, 400, 526, 778, 1363, 2053, 2341 |
| BstFNI | CGCG | 3 cut(s) | 453, 561, 2981 |
| BstHHI | GCGC | 5 cut(s) | 453, 455, 526, 561, 563 |
| BstKTI | GATC | 8 cut(s) | 162, 516, 649, 805, 821, 2067, 2077, 2847 |
| BstMAI | GTCTC | 9 cut(s) | 352, 961, 1147, 1469, 2147, 2334, 2657, 2858, 2936 |
| BstMBI | GATC | 8 cut(s) | 159, 513, 646, 802, 818, 2064, 2074, 2844 |
| BstNI | CCWGG | 1 cut(s) | 1388 |
| BstNSI | RCATGY | 2 cut(s) | 509, 2024 |
| BstPI | GGTNACC | 1 cut(s) | 2872 |
| BstSCI | CCNGG | 1 cut(s) | 1386 |
| BstSFI | CTRYAG | 2 cut(s) | 1317, 1394 |
| BstSLI | GKGCMC | 1 cut(s) | 1537 |
| BstUI | CGCG | 3 cut(s) | 453, 561, 2981 |
| BstV1I | GCAGC | 7 cut(s) | 166, 575, 760, 1380, 1408, 2281, 2995 |
| BstV2I | GAAGAC | 6 cut(s) | 236, 264, 440, 903, 1203, 1425 |
| BstX2I | RGATCY | 1 cut(s) | 818 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2451 |
| BstYI | RGATCY | 1 cut(s) | 818 |
| BstZ17I | GTATAC | 1 cut(s) | 1982 |
| Bsu15I | ATCGAT | 1 cut(s) | 158 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1076, 2769 |
| BsuRI | GGCC | 2 cut(s) | 296, 1535 |
| BsuTUI | ATCGAT | 1 cut(s) | 158 |
| BtgI | CCRYGG | 1 cut(s) | 2256 |
| BtgZI | GCGATG | 1 cut(s) | 181 |
| BtsCI | GGATG | 7 cut(s) | 310, 400, 526, 778, 1363, 2053, 2341 |
| BtsIMutI | CAGTG | 5 cut(s) | 105, 2367, 2589, 2836, 2997 |
| BveI | ACCTGC | 1 cut(s) | 2358 |
| Cac8I | GCNNGC | 7 cut(s) | 453, 561, 746, 1024, 1554, 1842, 2756 |
| CaiI | CAGNNNCTG | 1 cut(s) | 545 |
| CciI | TCATGA | 1 cut(s) | 1785 |
| CfoI | GCGC | 5 cut(s) | 453, 455, 526, 561, 563 |
| Cfr10I | RCCGGY | 1 cut(s) | 591 |
| Cfr13I | GGNCC | 3 cut(s) | 1384, 1533, 1534 |
| ClaI | ATCGAT | 1 cut(s) | 158 |
| CseI | GACGC | 4 cut(s) | 647, 2164, 2815, 2970 |
| Csp6I | GTAC | 3 cut(s) | 45, 489, 2466 |
| CspAI | ACCGGT | 1 cut(s) | 591 |
| CviQI | GTAC | 3 cut(s) | 45, 489, 2466 |
| DpnI | GATC | 8 cut(s) | 161, 515, 648, 804, 820, 2066, 2076, 2846 |
| DpnII | GATC | 8 cut(s) | 159, 513, 646, 802, 818, 2064, 2074, 2844 |
| DraI | TTTAAA | 1 cut(s) | 726 |
| EciI | GGCGGA | 1 cut(s) | 751 |
| Eco130I | CCWWGG | 1 cut(s) | 2256 |
| Eco147I | AGGCCT | 1 cut(s) | 296 |
| Eco24I | GRGCYC | 1 cut(s) | 1537 |
| Eco32I | GATATC | 1 cut(s) | 1183 |
| Eco47I | GGWCC | 1 cut(s) | 1384 |
| Eco57I | CTGAAG | 8 cut(s) | 129, 381, 548, 567, 1029, 1578, 2234, 2526 |
| Eco81I | CCTNAGG | 2 cut(s) | 1076, 2769 |
| Eco88I | CYCGRG | 1 cut(s) | 2331 |
| Eco91I | GGTNACC | 1 cut(s) | 2872 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1533 |
| EcoO65I | GGTNACC | 1 cut(s) | 2872 |
| EcoRI | GAATTC | 1 cut(s) | 1781 |
| EcoRII | CCWGG | 1 cut(s) | 1386 |
| EcoRV | GATATC | 1 cut(s) | 1183 |
| EcoT14I | CCWWGG | 1 cut(s) | 2256 |
| EcoT22I | ATGCAT | 2 cut(s) | 1729, 2514 |
| EcoT38I | GRGCYC | 1 cut(s) | 1537 |
| ErhI | CCWWGG | 1 cut(s) | 2256 |
| Esp3I | CGTCTC | 2 cut(s) | 1147, 2147 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 633, 665, 955, 987, 984, 1016, 1657, 1689 |
| FaqI | GGGAC | 1 cut(s) | 2610 |
| FauI | CCCGC | 1 cut(s) | 2763 |
| FauNDI | CATATG | 3 cut(s) | 324, 343, 2166 |
| FblI | GTMKAC | 1 cut(s) | 1981 |
| Fnu4HI | GCNGC | 9 cut(s) | 51, 128, 180, 564, 749, 1394, 1397, 2270, 3009 |
| FokI | GGATG | 7 cut(s) | 317, 407, 533, 785, 1370, 2060, 2348 |
| FriOI | GRGCYC | 1 cut(s) | 1537 |
| Fsp4HI | GCNGC | 9 cut(s) | 51, 128, 180, 564, 749, 1394, 1397, 2270, 3009 |
| FspBI | CTAG | 9 cut(s) | 84, 206, 356, 423, 816, 1202, 2150, 2558, 2667 |
| GlaI | GCGC | 5 cut(s) | 452, 454, 525, 560, 562 |
| GluI | GCNGC | 9 cut(s) | 51, 128, 180, 564, 749, 1394, 1397, 2270, 3009 |
| GsaI | CCCAGC | 3 cut(s) | 144, 486, 2296 |
| GsuI | CTGGAG | 5 cut(s) | 1373, 1409, 1517, 2475, 2676 |
| HaeIII | GGCC | 2 cut(s) | 296, 1535 |
| HapII | CCGG | 1 cut(s) | 592 |
| HgaI | GACGC | 4 cut(s) | 647, 2164, 2815, 2970 |
| HhaI | GCGC | 5 cut(s) | 453, 455, 526, 561, 563 |
| Hin1I | GRCGYC | 3 cut(s) | 658, 1409, 2807 |
| Hin6I | GCGC | 5 cut(s) | 451, 453, 524, 559, 561 |
| HinP1I | GCGC | 5 cut(s) | 451, 453, 524, 559, 561 |
| HindIII | AAGCTT | 1 cut(s) | 1541 |
| HpaII | CCGG | 1 cut(s) | 592 |
| HphI | GGTGA | 4 cut(s) | 590, 1220, 2884, 2966 |
| Hpy166II | GTNNAC | 1 cut(s) | 1982 |
| Hpy8I | GTNNAC | 1 cut(s) | 1982 |
| Hpy99I | CGWCG | 1 cut(s) | 2569 |
| HpyCH4III | ACNGT | 6 cut(s) | 1337, 1986, 2371, 2601, 2839, 2992 |
| HpyCH4IV | ACGT | 3 cut(s) | 1050, 1409, 2858 |
| HpySE526I | ACGT | 3 cut(s) | 1050, 1409, 2858 |
| Hsp92I | GRCGYC | 3 cut(s) | 658, 1409, 2807 |
| HspAI | GCGC | 5 cut(s) | 451, 453, 524, 559, 561 |
| Kzo9I | GATC | 8 cut(s) | 159, 513, 646, 802, 818, 2064, 2074, 2844 |
| LguI | GCTCTTC | 1 cut(s) | 734 |
| LmnI | GCTCC | 5 cut(s) | 22, 988, 1390, 1975, 2125 |
| Lsp1109I | GCAGC | 7 cut(s) | 166, 575, 760, 1380, 1408, 2281, 2995 |
| MaeI | CTAG | 9 cut(s) | 84, 206, 356, 423, 816, 1202, 2150, 2558, 2667 |
| MaeII | ACGT | 3 cut(s) | 1050, 1409, 2858 |
| MaeIII | GTNAC | 5 cut(s) | 2645, 2704, 2854, 2872, 2884 |
| MalI | GATC | 8 cut(s) | 161, 515, 648, 804, 820, 2066, 2076, 2846 |
| MboI | GATC | 8 cut(s) | 159, 513, 646, 802, 818, 2064, 2074, 2844 |
| MflI | RGATCY | 1 cut(s) | 818 |
| MhlI | GDGCHC | 1 cut(s) | 1537 |
| MluI | ACGCGT | 1 cut(s) | 2979 |
| MlyI | GAGTC | 4 cut(s) | 317, 430, 1766, 2370 |
| MmeI | TCCRAC | 6 cut(s) | 477, 933, 1863, 2025, 2040, 2218 |
| Mph1103I | ATGCAT | 2 cut(s) | 1729, 2514 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1041 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1614, 1616, 1865, 2449, 2507, 2517 |
| MspA1I | CMGCKG | 1 cut(s) | 2272 |
| MspCI | CTTAAG | 3 cut(s) | 980, 1508, 1991 |
| MspI | CCGG | 1 cut(s) | 592 |
| MspR9I | CCNGG | 1 cut(s) | 1388 |
| MvaI | CCWGG | 1 cut(s) | 1388 |
| MvnI | CGCG | 3 cut(s) | 453, 561, 2981 |
| NcoI | CCATGG | 1 cut(s) | 2256 |
| NdeI | CATATG | 3 cut(s) | 324, 343, 2166 |
| NdeII | GATC | 8 cut(s) | 159, 513, 646, 802, 818, 2064, 2074, 2844 |
| NlaIV | GGNNCC | 1 cut(s) | 1535 |
| NmeAIII | GCCGAG | 4 cut(s) | 66, 329, 634, 1639 |
| NmuCI | GTSAC | 2 cut(s) | 2872, 2884 |
| NsiI | ATGCAT | 2 cut(s) | 1729, 2514 |
| NspI | RCATGY | 2 cut(s) | 509, 2024 |
| NspV | TTCGAA | 1 cut(s) | 894 |
| PagI | TCATGA | 1 cut(s) | 1785 |
| PauI | GCGCGC | 2 cut(s) | 451, 559 |
| PceI | AGGCCT | 1 cut(s) | 296 |
| PciI | ACATGT | 2 cut(s) | 505, 2020 |
| PciSI | GCTCTTC | 1 cut(s) | 734 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 22 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1041 |
| PfeI | GAWTC | 9 cut(s) | 209, 968, 1031, 1060, 1439, 2114, 2227, 2561, 2995 |
| PinAI | ACCGGT | 1 cut(s) | 591 |
| PkrI | GCNGC | 9 cut(s) | 52, 129, 181, 565, 750, 1395, 1398, 2271, 3010 |
| PleI | GAGTC | 4 cut(s) | 316, 430, 1765, 2369 |
| PpsI | GAGTC | 4 cut(s) | 316, 430, 1765, 2369 |
| PscI | ACATGT | 2 cut(s) | 505, 2020 |
| Psp6I | CCWGG | 1 cut(s) | 1386 |
| PspEI | GGTNACC | 1 cut(s) | 2872 |
| PspFI | CCCAGC | 3 cut(s) | 140, 482, 2292 |
| PspGI | CCWGG | 1 cut(s) | 1386 |
| PspN4I | GGNNCC | 1 cut(s) | 1535 |
| PspOMI | GGGCCC | 1 cut(s) | 1533 |
| PspPI | GGNCC | 3 cut(s) | 1384, 1533, 1534 |
| PstI | CTGCAG | 1 cut(s) | 1398 |
| PstNI | CAGNNNCTG | 1 cut(s) | 545 |
| PsuI | RGATCY | 1 cut(s) | 818 |
| PteI | GCGCGC | 2 cut(s) | 451, 559 |
| PvuII | CAGCTG | 1 cut(s) | 2272 |
| RsaI | GTAC | 3 cut(s) | 46, 490, 2467 |
| RsaNI | GTAC | 3 cut(s) | 45, 489, 2466 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1614, 1616, 1865, 2449, 2507, 2517 |
| SapI | GCTCTTC | 1 cut(s) | 734 |
| SatI | GCNGC | 9 cut(s) | 51, 128, 180, 564, 749, 1394, 1397, 2270, 3009 |
| Sau3AI | GATC | 8 cut(s) | 159, 513, 646, 802, 818, 2064, 2074, 2844 |
| Sau96I | GGNCC | 3 cut(s) | 1384, 1533, 1534 |
| ScaI | AGTACT | 1 cut(s) | 490 |
| SchI | GAGTC | 4 cut(s) | 317, 430, 1766, 2370 |
| ScrFI | CCNGG | 1 cut(s) | 1388 |
| SduI | GDGCHC | 1 cut(s) | 1537 |
| SfcI | CTRYAG | 2 cut(s) | 1317, 1394 |
| SfuI | TTCGAA | 1 cut(s) | 894 |
| SinI | GGWCC | 1 cut(s) | 1384 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1614, 1616, 1865, 2449, 2507, 2517 |
| SmlI | CTYRAG | 4 cut(s) | 980, 1508, 1688, 1991 |
| SmoI | CTYRAG | 4 cut(s) | 980, 1508, 1688, 1991 |
| SseBI | AGGCCT | 1 cut(s) | 296 |
| SsiI | CCGC | 5 cut(s) | 50, 127, 736, 2609, 2756 |
| SspI | AATATT | 1 cut(s) | 2717 |
| SspMI | CTAG | 9 cut(s) | 84, 206, 356, 423, 816, 1202, 2150, 2558, 2667 |
| StuI | AGGCCT | 1 cut(s) | 296 |
| StyD4I | CCNGG | 1 cut(s) | 1386 |
| StyI | CCWWGG | 1 cut(s) | 2256 |
| TaaI | ACNGT | 6 cut(s) | 1337, 1986, 2371, 2601, 2839, 2992 |
| TaiI | ACGT | 3 cut(s) | 1053, 1412, 2861 |
| TaqI | TCGA | 5 cut(s) | 158, 516, 894, 1896, 2567 |
| TatI | WGTACW | 2 cut(s) | 488, 2465 |
| TauI | GCSGC | 2 cut(s) | 53, 130 |
| TfiI | GAWTC | 9 cut(s) | 209, 968, 1031, 1060, 1439, 2114, 2227, 2561, 2995 |
| TscAI | CASTG | 5 cut(s) | 112, 2374, 2596, 2836, 2997 |
| TseFI | GTSAC | 2 cut(s) | 2872, 2884 |
| TseI | GCWGC | 7 cut(s) | 179, 563, 748, 1393, 1396, 2269, 3008 |
| Tsp45I | GTSAC | 2 cut(s) | 2872, 2884 |
| TspRI | CASTG | 5 cut(s) | 112, 2374, 2596, 2836, 2997 |
| Vha464I | CTTAAG | 3 cut(s) | 980, 1508, 1991 |
| VpaK11BI | GGWCC | 1 cut(s) | 1384 |
| XapI | RAATTY | 4 cut(s) | 1306, 1589, 1781, 1921 |
| XceI | RCATGY | 2 cut(s) | 509, 2024 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2810 |
| XmiI | GTMKAC | 1 cut(s) | 1981 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1041 |
| XspI | CTAG | 9 cut(s) | 84, 206, 356, 423, 816, 1202, 2150, 2558, 2667 |
| ZraI | GACGTC | 1 cut(s) | 1410 |
| ZrmI | AGTACT | 1 cut(s) | 490 |
| Zsp2I | ATGCAT | 2 cut(s) | 1729, 2514 |