nuclear matrix constituent protein 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G65770 AT5G65770 AT5G65770 AT5G65780 |
| fragaria_vesca | FvH4_1g18512 FvH4_1g18512 |
| malus_domestica | MD02G1191400.v1.1 MD15G1302600.v1.1 |
| prunus_persica | Prupe.6G214100_v2.0.a1 Prupe.6G214100_v2.0.a1 |
| pyrus_communis | pycom15g26560 |
| rosa_chinensis | RchiOBHm_Chr2g0109151 |
| rosa_laevigata | RLG00000017717 |
| rosa_multiflora | Rmu_sc0000186.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00134460 |
| rosa_rugosa | Rorug02G0157500 Rorug02G0157500 Rorug02G0157500 Rorug02G0157600 |
| rosa_samantha | Rh2AG209600 Rh2BG220000 Rh2CG212100 Rh2DG215700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 540 |
| AccBSI | CCGCTC | 2 cut(s) | 1537, 1570 |
| AccII | CGCG | 1 cut(s) | 268 |
| AciI | CCGC | 5 cut(s) | 136, 1399, 1537, 1570, 1924 |
| AclWI | GGATC | 5 cut(s) | 951, 1506, 1845, 2093, 2579 |
| AcoI | YGGCCR | 2 cut(s) | 72, 783 |
| AcsI | RAATTY | 3 cut(s) | 296, 668, 857 |
| AcuI | CTGAAG | 4 cut(s) | 144, 282, 324, 1934 |
| AfaI | GTAC | 2 cut(s) | 2345, 2592 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 562, 918, 1569, 2499 |
| AflII | CTTAAG | 1 cut(s) | 1271 |
| AjnI | CCWGG | 1 cut(s) | 1208 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2412, 2444 |
| Alw26I | GTCTC | 7 cut(s) | 62, 139, 683, 910, 2235, 2309, 2591 |
| AlwI | GGATC | 5 cut(s) | 951, 1506, 1845, 2093, 2579 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 224, 592 |
| Ama87I | CYCGRG | 2 cut(s) | 2234, 2533 |
| AoxI | GGCC | 3 cut(s) | 72, 783, 1347 |
| ApoI | RAATTY | 3 cut(s) | 296, 668, 857 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 296, 1953 |
| AspLEI | GCGC | 2 cut(s) | 268, 541 |
| AspS9I | GGNCC | 2 cut(s) | 589, 961 |
| AsuC2I | CCSGG | 2 cut(s) | 2534, 2535 |
| AsuHPI | GGTGA | 5 cut(s) | 353, 889, 2422, 2444, 2507 |
| AvaI | CYCGRG | 2 cut(s) | 2234, 2533 |
| AvaII | GGWCC | 2 cut(s) | 589, 961 |
| BaeGI | GKGCMC | 2 cut(s) | 2040, 2509 |
| BalI | TGGCCA | 1 cut(s) | 785 |
| BanII | GRGCYC | 1 cut(s) | 1300 |
| BauI | CACGAG | 2 cut(s) | 206, 399 |
| BbsI | GAAGAC | 1 cut(s) | 624 |
| BbvCI | CCTCAGC | 2 cut(s) | 309, 1320 |
| BccI | CCATC | 7 cut(s) | 376, 1309, 1699, 1771, 2152, 2305, 2327 |
| BceAI | ACGGC | 1 cut(s) | 87 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 197, 231 |
| BciT130I | CCWGG | 1 cut(s) | 1210 |
| BclI | TGATCA | 2 cut(s) | 94, 661 |
| BcnI | CCSGG | 2 cut(s) | 2534, 2535 |
| BcoDI | GTCTC | 7 cut(s) | 62, 139, 683, 910, 2235, 2309, 2591 |
| BfaI | CTAG | 8 cut(s) | 161, 723, 1151, 1169, 1259, 2136, 2175, 2601 |
| BfmI | CTRYAG | 1 cut(s) | 2640 |
| BfrI | CTTAAG | 1 cut(s) | 1271 |
| BglII | AGATCT | 1 cut(s) | 1255 |
| BlpI | GCTNAGC | 1 cut(s) | 1866 |
| BmcAI | AGTACT | 1 cut(s) | 2592 |
| Bme1390I | CCNGG | 3 cut(s) | 1210, 2534, 2535 |
| Bme18I | GGWCC | 2 cut(s) | 589, 961 |
| BmeT110I | CYCGRG | 2 cut(s) | 2234, 2533 |
| BmgT120I | GGNCC | 2 cut(s) | 589, 961 |
| BmrFI | CCNGG | 3 cut(s) | 1210, 2534, 2535 |
| BmsI | GCATC | 9 cut(s) | 119, 201, 274, 526, 853, 1504, 1581, 1999, 2007 |
| BpiI | GAAGAC | 1 cut(s) | 624 |
| BpmI | CTGGAG | 2 cut(s) | 494, 893 |
| Bpu10I | CCTNAGC | 2 cut(s) | 309, 1320 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1866 |
| BpuEI | CTTGAG | 4 cut(s) | 494, 1115, 1757, 2615 |
| BpuMI | CCSGG | 2 cut(s) | 2534, 2535 |
| BsaBI | GATNNNNATC | 1 cut(s) | 948 |
| BsaJI | CCNNGG | 1 cut(s) | 2533 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 866, 896, 1694, 1724 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 562, 918, 1569, 2499 |
| Bse118I | RCCGGY | 1 cut(s) | 2492 |
| Bse1I | ACTGG | 3 cut(s) | 786, 2588, 2675 |
| Bse8I | GATNNNNATC | 1 cut(s) | 948 |
| BseBI | CCWGG | 1 cut(s) | 1210 |
| BseDI | CCNNGG | 1 cut(s) | 2533 |
| BseGI | GGATG | 3 cut(s) | 289, 1492, 2363 |
| BseJI | GATNNNNATC | 1 cut(s) | 948 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 562, 918, 1569, 2499 |
| BseNI | ACTGG | 3 cut(s) | 786, 2588, 2675 |
| BseSI | GKGCMC | 2 cut(s) | 2040, 2509 |
| BseX3I | CGGCCG | 1 cut(s) | 72 |
| BseYI | CCCAGC | 1 cut(s) | 2039 |
| BsgI | GTGCAG | 3 cut(s) | 87, 237, 2191 |
| Bsh1236I | CGCG | 1 cut(s) | 268 |
| Bsh1285I | CGRYCG | 1 cut(s) | 75 |
| BshFI | GGCC | 3 cut(s) | 74, 785, 1349 |
| BsiEI | CGRYCG | 1 cut(s) | 75 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2234, 2533 |
| BsiSI | CCGG | 2 cut(s) | 2493, 2534 |
| BslFI | GGGAC | 1 cut(s) | 2516 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 562, 918, 1569, 2499 |
| BsmAI | GTCTC | 7 cut(s) | 62, 139, 683, 910, 2235, 2309, 2591 |
| BsmBI | CGTCTC | 2 cut(s) | 62, 910 |
| BsmFI | GGGAC | 1 cut(s) | 2516 |
| BsmI | GAATGC | 2 cut(s) | 1436, 2395 |
| BsnI | GGCC | 3 cut(s) | 74, 785, 1349 |
| BsoBI | CYCGRG | 2 cut(s) | 2234, 2533 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1300, 2040, 2509 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1866 |
| BspACI | CCGC | 5 cut(s) | 136, 1399, 1537, 1570, 1924 |
| BspANI | GGCC | 3 cut(s) | 74, 785, 1349 |
| BspFNI | CGCG | 1 cut(s) | 268 |
| BspHI | TCATGA | 1 cut(s) | 1548 |
| BspPI | GGATC | 5 cut(s) | 951, 1506, 1845, 2093, 2579 |
| BspQI | GCTCTTC | 2 cut(s) | 552, 1452 |
| BspTI | CTTAAG | 1 cut(s) | 1271 |
| BsrBI | CCGCTC | 2 cut(s) | 1537, 1570 |
| BsrFI | RCCGGY | 1 cut(s) | 2492 |
| BsrI | ACTGG | 3 cut(s) | 786, 2588, 2675 |
| BssAI | RCCGGY | 1 cut(s) | 2492 |
| BssECI | CCNNGG | 1 cut(s) | 2533 |
| BssSI | CACGAG | 2 cut(s) | 206, 399 |
| Bst2BI | CACGAG | 2 cut(s) | 206, 399 |
| Bst2UI | CCWGG | 1 cut(s) | 1210 |
| Bst4CI | ACNGT | 7 cut(s) | 92, 365, 969, 1655, 2229, 2579, 2641 |
| Bst6I | CTCTTC | 8 cut(s) | 20, 67, 552, 721, 1176, 1452, 1944, 2545 |
| BstAFI | CTTAAG | 1 cut(s) | 1271 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 211, 224 |
| BstC8I | GCNNGC | 9 cut(s) | 216, 342, 543, 787, 887, 1938, 2076, 2290, 2402 |
| BstF5I | GGATG | 3 cut(s) | 289, 1492, 2363 |
| BstFNI | CGCG | 1 cut(s) | 268 |
| BstHHI | GCGC | 2 cut(s) | 268, 541 |
| BstMAI | GTCTC | 7 cut(s) | 62, 139, 683, 910, 2235, 2309, 2591 |
| BstMCI | CGRYCG | 1 cut(s) | 75 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 107, 211, 224, 1156, 1918, 2009 |
| BstNI | CCWGG | 1 cut(s) | 1210 |
| BstNSI | RCATGY | 2 cut(s) | 110, 1940 |
| BstSCI | CCNGG | 3 cut(s) | 1208, 2532, 2533 |
| BstSFI | CTRYAG | 1 cut(s) | 2640 |
| BstSLI | GKGCMC | 2 cut(s) | 2040, 2509 |
| BstUI | CGCG | 1 cut(s) | 268 |
| BstV2I | GAAGAC | 1 cut(s) | 624 |
| BstX2I | RGATCY | 2 cut(s) | 943, 1255 |
| BstYI | RGATCY | 2 cut(s) | 943, 1255 |
| BstZI | CGGCCG | 1 cut(s) | 72 |
| BsuRI | GGCC | 3 cut(s) | 74, 785, 1349 |
| BtsCI | GGATG | 3 cut(s) | 289, 1492, 2363 |
| BtsIMutI | CAGTG | 5 cut(s) | 254, 300, 2208, 2637, 2668 |
| Cac8I | GCNNGC | 9 cut(s) | 216, 342, 543, 787, 887, 1938, 2076, 2290, 2402 |
| CaiI | CAGNNNCTG | 2 cut(s) | 224, 592 |
| CciI | TCATGA | 1 cut(s) | 1548 |
| CfoI | GCGC | 2 cut(s) | 268, 541 |
| Cfr10I | RCCGGY | 1 cut(s) | 2492 |
| Cfr13I | GGNCC | 2 cut(s) | 589, 961 |
| Cfr9I | CCCGGG | 1 cut(s) | 2533 |
| Csp6I | GTAC | 2 cut(s) | 2344, 2591 |
| CviAII | CATG | 7 cut(s) | 107, 1463, 1549, 1670, 1937, 2347, 2477 |
| CviQI | GTAC | 2 cut(s) | 2344, 2591 |
| DraI | TTTAAA | 1 cut(s) | 489 |
| EaeI | YGGCCR | 2 cut(s) | 72, 783 |
| EagI | CGGCCG | 1 cut(s) | 72 |
| Eam1104I | CTCTTC | 8 cut(s) | 20, 67, 552, 721, 1176, 1452, 1944, 2545 |
| EarI | CTCTTC | 8 cut(s) | 20, 67, 552, 721, 1176, 1452, 1944, 2545 |
| EclXI | CGGCCG | 1 cut(s) | 72 |
| Eco24I | GRGCYC | 1 cut(s) | 1300 |
| Eco47I | GGWCC | 2 cut(s) | 589, 961 |
| Eco52I | CGGCCG | 1 cut(s) | 72 |
| Eco57I | CTGAAG | 4 cut(s) | 144, 282, 324, 1934 |
| Eco88I | CYCGRG | 2 cut(s) | 2234, 2533 |
| EcoO109I | RGGNCCY | 2 cut(s) | 589, 961 |
| EcoRII | CCWGG | 1 cut(s) | 1208 |
| EcoT22I | ATGCAT | 1 cut(s) | 112 |
| EcoT38I | GRGCYC | 1 cut(s) | 1300 |
| Esp3I | CGTCTC | 2 cut(s) | 62, 910 |
| FaeI | CATG | 7 cut(s) | 110, 1466, 1552, 1673, 1940, 2350, 2480 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 396, 428, 534, 566, 718, 750, 747, 779 |
| FaqI | GGGAC | 1 cut(s) | 2516 |
| FatI | CATG | 7 cut(s) | 106, 1462, 1548, 1669, 1936, 2346, 2476 |
| FauI | CCCGC | 2 cut(s) | 129, 1917 |
| FbaI | TGATCA | 2 cut(s) | 94, 661 |
| FokI | GGATG | 3 cut(s) | 296, 1499, 2350 |
| FriOI | GRGCYC | 1 cut(s) | 1300 |
| FspBI | CTAG | 8 cut(s) | 161, 723, 1151, 1169, 1259, 2136, 2175, 2601 |
| FspI | TGCGCA | 1 cut(s) | 540 |
| GlaI | GCGC | 2 cut(s) | 267, 540 |
| GsaI | CCCAGC | 1 cut(s) | 2043 |
| GsuI | CTGGAG | 2 cut(s) | 494, 893 |
| HaeIII | GGCC | 3 cut(s) | 74, 785, 1349 |
| HapII | CCGG | 2 cut(s) | 2493, 2534 |
| HhaI | GCGC | 2 cut(s) | 268, 541 |
| Hin1II | CATG | 7 cut(s) | 110, 1466, 1552, 1673, 1940, 2350, 2480 |
| Hin6I | GCGC | 2 cut(s) | 266, 539 |
| HinP1I | GCGC | 2 cut(s) | 266, 539 |
| HincII | GTYRAC | 1 cut(s) | 2635 |
| HindII | GTYRAC | 1 cut(s) | 2635 |
| HindIII | AAGCTT | 1 cut(s) | 348 |
| HpaII | CCGG | 2 cut(s) | 2493, 2534 |
| HphI | GGTGA | 5 cut(s) | 353, 889, 2422, 2444, 2507 |
| Hpy166II | GTNNAC | 1 cut(s) | 2635 |
| Hpy8I | GTNNAC | 1 cut(s) | 2635 |
| HpyCH4III | ACNGT | 7 cut(s) | 92, 365, 969, 1655, 2229, 2579, 2641 |
| HpyCH4IV | ACGT | 3 cut(s) | 1510, 1603, 2656 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 107, 211, 224, 1156, 1918, 2009 |
| HpySE526I | ACGT | 3 cut(s) | 1510, 1603, 2656 |
| Hsp92II | CATG | 7 cut(s) | 110, 1466, 1552, 1673, 1940, 2350, 2480 |
| HspAI | GCGC | 2 cut(s) | 266, 539 |
| Ksp22I | TGATCA | 2 cut(s) | 94, 661 |
| LguI | GCTCTTC | 2 cut(s) | 552, 1452 |
| LmnI | GCTCC | 3 cut(s) | 643, 679, 1090 |
| LweI | GCATC | 9 cut(s) | 119, 201, 274, 526, 853, 1504, 1581, 1999, 2007 |
| MaeI | CTAG | 8 cut(s) | 161, 723, 1151, 1169, 1259, 2136, 2175, 2601 |
| MaeII | ACGT | 3 cut(s) | 1510, 1603, 2656 |
| MaeIII | GTNAC | 1 cut(s) | 2299 |
| MbiI | CCGCTC | 2 cut(s) | 1537, 1570 |
| MfeI | CAATTG | 1 cut(s) | 2246 |
| MflI | RGATCY | 2 cut(s) | 943, 1255 |
| MhlI | GDGCHC | 3 cut(s) | 1300, 2040, 2509 |
| MlsI | TGGCCA | 1 cut(s) | 785 |
| MluNI | TGGCCA | 1 cut(s) | 785 |
| MlyI | GAGTC | 3 cut(s) | 174, 2126, 2474 |
| MmeI | TCCRAC | 3 cut(s) | 12, 594, 1626 |
| Mox20I | TGGCCA | 1 cut(s) | 785 |
| Mph1103I | ATGCAT | 1 cut(s) | 112 |
| MroXI | GAANNNNTTC | 2 cut(s) | 296, 1953 |
| MscI | TGGCCA | 1 cut(s) | 785 |
| Msp20I | TGGCCA | 1 cut(s) | 785 |
| MspA1I | CMGCKG | 1 cut(s) | 1924 |
| MspCI | CTTAAG | 1 cut(s) | 1271 |
| MspI | CCGG | 2 cut(s) | 2493, 2534 |
| MspR9I | CCNGG | 3 cut(s) | 1210, 2534, 2535 |
| MunI | CAATTG | 1 cut(s) | 2246 |
| Mva1269I | GAATGC | 2 cut(s) | 1436, 2395 |
| MvaI | CCWGG | 1 cut(s) | 1210 |
| MvnI | CGCG | 1 cut(s) | 268 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 107, 211, 224, 1156, 1918, 2009 |
| NciI | CCSGG | 2 cut(s) | 2534, 2535 |
| NlaIII | CATG | 7 cut(s) | 110, 1466, 1552, 1673, 1940, 2350, 2480 |
| NsbI | TGCGCA | 1 cut(s) | 540 |
| NsiI | ATGCAT | 1 cut(s) | 112 |
| NspI | RCATGY | 2 cut(s) | 110, 1940 |
| PaeI | GCATGC | 1 cut(s) | 1940 |
| PagI | TCATGA | 1 cut(s) | 1548 |
| PciSI | GCTCTTC | 2 cut(s) | 552, 1452 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 361 |
| PctI | GAATGC | 2 cut(s) | 1436, 2395 |
| PdmI | GAANNNNTTC | 2 cut(s) | 296, 1953 |
| PleI | GAGTC | 3 cut(s) | 173, 2126, 2474 |
| PpsI | GAGTC | 3 cut(s) | 173, 2126, 2474 |
| PpuMI | RGGWCCY | 2 cut(s) | 589, 961 |
| Psp5II | RGGWCCY | 2 cut(s) | 589, 961 |
| Psp6I | CCWGG | 1 cut(s) | 1208 |
| PspFI | CCCAGC | 1 cut(s) | 2039 |
| PspGI | CCWGG | 1 cut(s) | 1208 |
| PspPI | GGNCC | 2 cut(s) | 589, 961 |
| PspPPI | RGGWCCY | 2 cut(s) | 589, 961 |
| PstNI | CAGNNNCTG | 2 cut(s) | 224, 592 |
| PsuI | RGATCY | 2 cut(s) | 943, 1255 |
| RsaI | GTAC | 2 cut(s) | 2345, 2592 |
| RsaNI | GTAC | 2 cut(s) | 2344, 2591 |
| SapI | GCTCTTC | 2 cut(s) | 552, 1452 |
| Sau96I | GGNCC | 2 cut(s) | 589, 961 |
| ScaI | AGTACT | 1 cut(s) | 2592 |
| SchI | GAGTC | 3 cut(s) | 174, 2126, 2474 |
| ScrFI | CCNGG | 3 cut(s) | 1210, 2534, 2535 |
| SduI | GDGCHC | 3 cut(s) | 1300, 2040, 2509 |
| SfaNI | GCATC | 9 cut(s) | 119, 201, 274, 526, 853, 1504, 1581, 1999, 2007 |
| SfcI | CTRYAG | 1 cut(s) | 2640 |
| SinI | GGWCC | 2 cut(s) | 589, 961 |
| SmaI | CCCGGG | 1 cut(s) | 2535 |
| SmlI | CTYRAG | 5 cut(s) | 473, 1094, 1271, 1736, 2594 |
| SmoI | CTYRAG | 5 cut(s) | 473, 1094, 1271, 1736, 2594 |
| SphI | GCATGC | 1 cut(s) | 1940 |
| SsiI | CCGC | 5 cut(s) | 136, 1399, 1537, 1570, 1924 |
| SspI | AATATT | 3 cut(s) | 274, 634, 2611 |
| SspMI | CTAG | 8 cut(s) | 161, 723, 1151, 1169, 1259, 2136, 2175, 2601 |
| StyD4I | CCNGG | 3 cut(s) | 1208, 2532, 2533 |
| TaaI | ACNGT | 7 cut(s) | 92, 365, 969, 1655, 2229, 2579, 2641 |
| TaiI | ACGT | 3 cut(s) | 1513, 1606, 2659 |
| TaqI | TCGA | 5 cut(s) | 534, 580, 598, 955, 2278 |
| TaqII | GACCGA | 1 cut(s) | 701 |
| TatI | WGTACW | 1 cut(s) | 2590 |
| TauI | GCSGC | 1 cut(s) | 1540 |
| TscAI | CASTG | 5 cut(s) | 254, 307, 2215, 2644, 2675 |
| TspGWI | ACGGA | 2 cut(s) | 1813, 2023 |
| TspMI | CCCGGG | 1 cut(s) | 2533 |
| TspRI | CASTG | 5 cut(s) | 254, 307, 2215, 2644, 2675 |
| Vha464I | CTTAAG | 1 cut(s) | 1271 |
| VpaK11BI | GGWCC | 2 cut(s) | 589, 961 |
| XapI | RAATTY | 3 cut(s) | 296, 668, 857 |
| XbaI | TCTAGA | 1 cut(s) | 1258 |
| XceI | RCATGY | 2 cut(s) | 110, 1940 |
| XmaI | CCCGGG | 1 cut(s) | 2533 |
| XmnI | GAANNNNTTC | 2 cut(s) | 296, 1953 |
| XspI | CTAG | 8 cut(s) | 161, 723, 1151, 1169, 1259, 2136, 2175, 2601 |
| ZrmI | AGTACT | 1 cut(s) | 2592 |
| Zsp2I | ATGCAT | 1 cut(s) | 112 |