nuclear matrix constituent protein 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G65770 AT5G65770 AT5G65770 AT5G65780 |
| fragaria_vesca | FvH4_1g18512 FvH4_1g18512 |
| malus_domestica | MD02G1191400.v1.1 MD15G1302600.v1.1 |
| prunus_persica | Prupe.6G214100_v2.0.a1 Prupe.6G214100_v2.0.a1 |
| pyrus_communis | pycom15g26560 |
| rosa_chinensis | RchiOBHm_Chr2g0109151 |
| rosa_laevigata | RLG00000017717 |
| rosa_multiflora | Rmu_sc0000186.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00134460 |
| rosa_rugosa | Rorug02G0157500 Rorug02G0157500 Rorug02G0157500 Rorug02G0157600 |
| rosa_samantha | Rh2AG209600 Rh2BG220000 Rh2CG212100 Rh2DG215700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 1762, 1795 |
| AccII | CGCG | 1 cut(s) | 13 |
| AciI | CCGC | 9 cut(s) | 11, 13, 115, 297, 361, 1624, 1762, 1795, 2149 |
| AclWI | GGATC | 5 cut(s) | 828, 1176, 1194, 2315, 2804 |
| AcoI | YGGCCR | 1 cut(s) | 1008 |
| AcsI | RAATTY | 6 cut(s) | 521, 893, 1082, 1427, 2958, 3100 |
| AcuI | CTGAAG | 6 cut(s) | 369, 549, 1391, 2001, 2159, 2396 |
| AcyI | GRCGYC | 1 cut(s) | 32 |
| AfaI | GTAC | 2 cut(s) | 1730, 2570 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 41, 787, 1702, 1794 |
| AhlI | ACTAGT | 1 cut(s) | 3199 |
| AjnI | CCWGG | 3 cut(s) | 1433, 2263, 2758 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2637, 2669 |
| Alw26I | GTCTC | 9 cut(s) | 287, 364, 908, 1135, 1527, 1980, 2457, 2816, 3035 |
| AlwI | GGATC | 5 cut(s) | 828, 1176, 1194, 2315, 2804 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 449, 817 |
| Ama87I | CYCGRG | 1 cut(s) | 1961 |
| AoxI | GGCC | 6 cut(s) | 876, 1008, 1572, 1785, 2609, 3255 |
| ApoI | RAATTY | 6 cut(s) | 521, 893, 1082, 1427, 2958, 3100 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 521, 2178 |
| AspLEI | GCGC | 3 cut(s) | 156, 172, 1110 |
| AspS9I | GGNCC | 2 cut(s) | 877, 1786 |
| AsuC2I | CCSGG | 3 cut(s) | 36, 66, 89 |
| AsuHPI | GGTGA | 6 cut(s) | 103, 578, 1114, 2647, 2669, 2732 |
| AvaI | CYCGRG | 1 cut(s) | 1961 |
| BalI | TGGCCA | 1 cut(s) | 1010 |
| BanII | GRGCYC | 2 cut(s) | 41, 89 |
| BauI | CACGAG | 1 cut(s) | 624 |
| BbsI | GAAGAC | 2 cut(s) | 224, 849 |
| BbvCI | CCTCAGC | 3 cut(s) | 534, 1545, 2238 |
| BccI | CCATC | 4 cut(s) | 601, 1534, 1996, 2374 |
| BceAI | ACGGC | 1 cut(s) | 3242 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 61, 95 |
| BciT130I | CCWGG | 3 cut(s) | 1435, 2265, 2760 |
| BclI | TGATCA | 2 cut(s) | 886, 2953 |
| BcnI | CCSGG | 3 cut(s) | 36, 66, 89 |
| BcoDI | GTCTC | 9 cut(s) | 287, 364, 908, 1135, 1527, 1980, 2457, 2816, 3035 |
| BcuI | ACTAGT | 1 cut(s) | 3199 |
| BfaI | CTAG | 6 cut(s) | 1376, 1394, 1484, 2358, 2826, 3200 |
| BfmI | CTRYAG | 2 cut(s) | 1563, 1817 |
| BglII | AGATCT | 1 cut(s) | 1480 |
| BlpI | GCTNAGC | 2 cut(s) | 2091, 3159 |
| Bme1390I | CCNGG | 6 cut(s) | 36, 66, 89, 1435, 2265, 2760 |
| BmeT110I | CYCGRG | 1 cut(s) | 1961 |
| BmgT120I | GGNCC | 2 cut(s) | 877, 1786 |
| BmiI | GGNNCC | 2 cut(s) | 40, 3114 |
| BmrFI | CCNGG | 6 cut(s) | 36, 66, 89, 1435, 2265, 2760 |
| BmrI | ACTGGG | 1 cut(s) | 2391 |
| BmuI | ACTGGG | 1 cut(s) | 2391 |
| BpiI | GAAGAC | 2 cut(s) | 224, 849 |
| BpmI | CTGGAG | 1 cut(s) | 719 |
| Bpu10I | CCTNAGC | 3 cut(s) | 534, 1545, 2238 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2091, 3159 |
| BpuEI | CTTGAG | 4 cut(s) | 719, 1340, 1481, 2840 |
| BpuMI | CCSGG | 3 cut(s) | 36, 66, 89 |
| BsaAI | YACGTR | 1 cut(s) | 494 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1173 |
| BsaHI | GRCGYC | 1 cut(s) | 32 |
| BsaI | GGTCTC | 3 cut(s) | 287, 1527, 1980 |
| BsaJI | CCNNGG | 3 cut(s) | 11, 65, 3153 |
| BsaWI | WCCGGW | 1 cut(s) | 41 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 41, 787, 1702, 1794 |
| Bse1I | ACTGG | 3 cut(s) | 822, 1011, 2397 |
| Bse3DI | GCAATG | 1 cut(s) | 174 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1173 |
| BseBI | CCWGG | 3 cut(s) | 1435, 2265, 2760 |
| BseDI | CCNNGG | 3 cut(s) | 11, 65, 3153 |
| BseGI | GGATG | 2 cut(s) | 514, 1717 |
| BseJI | GATNNNNATC | 1 cut(s) | 1173 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 41, 787, 1702, 1794 |
| BseMI | GCAATG | 1 cut(s) | 174 |
| BseNI | ACTGG | 3 cut(s) | 822, 1011, 2397 |
| BseRI | GAGGAG | 8 cut(s) | 155, 689, 881, 950, 1873, 1876, 1913, 2382 |
| BseYI | CCCAGC | 1 cut(s) | 128 |
| BsgI | GTGCAG | 3 cut(s) | 312, 462, 2413 |
| Bsh1236I | CGCG | 1 cut(s) | 13 |
| Bsh1285I | CGRYCG | 1 cut(s) | 17 |
| BshFI | GGCC | 6 cut(s) | 878, 1010, 1574, 1787, 2611, 3257 |
| BsiEI | CGRYCG | 1 cut(s) | 17 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1961 |
| BsiSI | CCGG | 4 cut(s) | 35, 42, 65, 89 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 41, 787, 1702, 1794 |
| BsmAI | GTCTC | 9 cut(s) | 287, 364, 908, 1135, 1527, 1980, 2457, 2816, 3035 |
| BsmBI | CGTCTC | 1 cut(s) | 1135 |
| BsmI | GAATGC | 3 cut(s) | 265, 1661, 2620 |
| BsnI | GGCC | 6 cut(s) | 878, 1010, 1574, 1787, 2611, 3257 |
| Bso31I | GGTCTC | 3 cut(s) | 287, 1527, 1980 |
| BsoBI | CYCGRG | 1 cut(s) | 1961 |
| Bsp1286I | GDGCHC | 2 cut(s) | 41, 89 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2091, 3159 |
| BspACI | CCGC | 9 cut(s) | 11, 13, 115, 297, 361, 1624, 1762, 1795, 2149 |
| BspANI | GGCC | 6 cut(s) | 878, 1010, 1574, 1787, 2611, 3257 |
| BspFNI | CGCG | 1 cut(s) | 13 |
| BspHI | TCATGA | 1 cut(s) | 1773 |
| BspLI | GGNNCC | 2 cut(s) | 40, 3114 |
| BspMAI | CTGCAG | 1 cut(s) | 1567 |
| BspPI | GGATC | 5 cut(s) | 828, 1176, 1194, 2315, 2804 |
| BspQI | GCTCTTC | 1 cut(s) | 1677 |
| BspTNI | GGTCTC | 3 cut(s) | 287, 1527, 1980 |
| BsrBI | CCGCTC | 2 cut(s) | 1762, 1795 |
| BsrDI | GCAATG | 1 cut(s) | 174 |
| BsrI | ACTGG | 3 cut(s) | 822, 1011, 2397 |
| BssECI | CCNNGG | 3 cut(s) | 11, 65, 3153 |
| BssNI | GRCGYC | 1 cut(s) | 32 |
| BssSI | CACGAG | 1 cut(s) | 624 |
| BssT1I | CCWWGG | 1 cut(s) | 3153 |
| Bst2BI | CACGAG | 1 cut(s) | 624 |
| Bst2UI | CCWGG | 3 cut(s) | 1435, 2265, 2760 |
| Bst4CI | ACNGT | 8 cut(s) | 317, 590, 1880, 2199, 2451, 2804, 2866, 2984 |
| BstACI | GRCGYC | 1 cut(s) | 32 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 436, 449, 2234, 3169 |
| BstBAI | YACGTR | 1 cut(s) | 494 |
| BstC8I | GCNNGC | 8 cut(s) | 441, 567, 1012, 1112, 1814, 2301, 2730, 3255 |
| BstDSI | CCRYGG | 1 cut(s) | 11 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1700 |
| BstF5I | GGATG | 2 cut(s) | 514, 1717 |
| BstFNI | CGCG | 1 cut(s) | 13 |
| BstHHI | GCGC | 3 cut(s) | 156, 172, 1110 |
| BstMAI | GTCTC | 9 cut(s) | 287, 364, 908, 1135, 1527, 1980, 2457, 2816, 3035 |
| BstMCI | CGRYCG | 1 cut(s) | 17 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 176, 332, 436, 449, 1381, 1571, 2143, 2234, 3169 |
| BstNI | CCWGG | 3 cut(s) | 1435, 2265, 2760 |
| BstNSI | RCATGY | 2 cut(s) | 335, 2885 |
| BstSCI | CCNGG | 6 cut(s) | 34, 64, 87, 1433, 2263, 2758 |
| BstSFI | CTRYAG | 2 cut(s) | 1563, 1817 |
| BstUI | CGCG | 1 cut(s) | 13 |
| BstV2I | GAAGAC | 2 cut(s) | 224, 849 |
| BstX2I | RGATCY | 3 cut(s) | 1168, 1186, 1480 |
| BstYI | RGATCY | 3 cut(s) | 1168, 1186, 1480 |
| BsuRI | GGCC | 6 cut(s) | 878, 1010, 1574, 1787, 2611, 3257 |
| BtgI | CCRYGG | 1 cut(s) | 11 |
| BtsCI | GGATG | 2 cut(s) | 514, 1717 |
| BtsI | GCAGTG | 1 cut(s) | 2388 |
| BtsIMutI | CAGTG | 5 cut(s) | 525, 2388, 2430, 2862, 2989 |
| Cac8I | GCNNGC | 8 cut(s) | 441, 567, 1012, 1112, 1814, 2301, 2730, 3255 |
| CaiI | CAGNNNCTG | 2 cut(s) | 449, 817 |
| CciI | TCATGA | 1 cut(s) | 1773 |
| CfoI | GCGC | 3 cut(s) | 156, 172, 1110 |
| Cfr13I | GGNCC | 2 cut(s) | 877, 1786 |
| Cfr42I | CCGCGG | 1 cut(s) | 14 |
| CseI | GACGC | 1 cut(s) | 40 |
| Csp6I | GTAC | 2 cut(s) | 1729, 2569 |
| CviQI | GTAC | 2 cut(s) | 1729, 2569 |
| DraI | TTTAAA | 2 cut(s) | 898, 945 |
| EaeI | YGGCCR | 1 cut(s) | 1008 |
| Eco130I | CCWWGG | 1 cut(s) | 3153 |
| Eco24I | GRGCYC | 2 cut(s) | 41, 89 |
| Eco31I | GGTCTC | 3 cut(s) | 287, 1527, 1980 |
| Eco57I | CTGAAG | 6 cut(s) | 369, 549, 1391, 2001, 2159, 2396 |
| Eco88I | CYCGRG | 1 cut(s) | 1961 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1700 |
| EcoO109I | RGGNCCY | 1 cut(s) | 877 |
| EcoRI | GAATTC | 1 cut(s) | 3100 |
| EcoRII | CCWGG | 3 cut(s) | 1433, 2263, 2758 |
| EcoT14I | CCWWGG | 1 cut(s) | 3153 |
| EcoT22I | ATGCAT | 2 cut(s) | 337, 432 |
| EcoT38I | GRGCYC | 2 cut(s) | 41, 89 |
| ErhI | CCWWGG | 1 cut(s) | 3153 |
| Esp3I | CGTCTC | 1 cut(s) | 1135 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 621, 653, 759, 791, 943, 975, 972, 1004 |
| FauI | CCCGC | 2 cut(s) | 354, 2142 |
| FbaI | TGATCA | 2 cut(s) | 886, 2953 |
| FokI | GGATG | 2 cut(s) | 521, 1724 |
| FriOI | GRGCYC | 2 cut(s) | 41, 89 |
| FspBI | CTAG | 6 cut(s) | 1376, 1394, 1484, 2358, 2826, 3200 |
| GlaI | GCGC | 3 cut(s) | 155, 171, 1109 |
| GsaI | CCCAGC | 1 cut(s) | 132 |
| GsuI | CTGGAG | 1 cut(s) | 719 |
| HaeIII | GGCC | 6 cut(s) | 878, 1010, 1574, 1787, 2611, 3257 |
| HapII | CCGG | 4 cut(s) | 35, 42, 65, 89 |
| HgaI | GACGC | 1 cut(s) | 40 |
| HhaI | GCGC | 3 cut(s) | 156, 172, 1110 |
| Hin1I | GRCGYC | 1 cut(s) | 32 |
| Hin6I | GCGC | 3 cut(s) | 154, 170, 1108 |
| HinP1I | GCGC | 3 cut(s) | 154, 170, 1108 |
| HincII | GTYRAC | 1 cut(s) | 2907 |
| HindII | GTYRAC | 1 cut(s) | 2907 |
| HindIII | AAGCTT | 2 cut(s) | 191, 573 |
| HpaII | CCGG | 4 cut(s) | 35, 42, 65, 89 |
| HphI | GGTGA | 6 cut(s) | 103, 578, 1114, 2647, 2669, 2732 |
| Hpy166II | GTNNAC | 3 cut(s) | 320, 2869, 2907 |
| Hpy8I | GTNNAC | 3 cut(s) | 320, 2869, 2907 |
| Hpy99I | CGWCG | 2 cut(s) | 31, 34 |
| HpyCH4III | ACNGT | 8 cut(s) | 317, 590, 1880, 2199, 2451, 2804, 2866, 2984 |
| HpyCH4IV | ACGT | 2 cut(s) | 493, 1828 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 176, 332, 436, 449, 1381, 1571, 2143, 2234, 3169 |
| HpySE526I | ACGT | 2 cut(s) | 493, 1828 |
| Hsp92I | GRCGYC | 1 cut(s) | 32 |
| HspAI | GCGC | 3 cut(s) | 154, 170, 1108 |
| Ksp22I | TGATCA | 2 cut(s) | 886, 2953 |
| KspI | CCGCGG | 1 cut(s) | 14 |
| LguI | GCTCTTC | 1 cut(s) | 1677 |
| LmnI | GCTCC | 5 cut(s) | 44, 868, 904, 1315, 3225 |
| MaeI | CTAG | 6 cut(s) | 1376, 1394, 1484, 2358, 2826, 3200 |
| MaeII | ACGT | 2 cut(s) | 493, 1828 |
| MaeIII | GTNAC | 2 cut(s) | 95, 2521 |
| MbiI | CCGCTC | 2 cut(s) | 1762, 1795 |
| MfeI | CAATTG | 1 cut(s) | 2468 |
| MflI | RGATCY | 3 cut(s) | 1168, 1186, 1480 |
| MhlI | GDGCHC | 2 cut(s) | 41, 89 |
| MlsI | TGGCCA | 1 cut(s) | 1010 |
| MluNI | TGGCCA | 1 cut(s) | 1010 |
| MlyI | GAGTC | 5 cut(s) | 16, 152, 399, 2864, 2912 |
| MmeI | TCCRAC | 5 cut(s) | 483, 819, 1077, 1884, 3175 |
| Mox20I | TGGCCA | 1 cut(s) | 1010 |
| Mph1103I | ATGCAT | 2 cut(s) | 337, 432 |
| MroXI | GAANNNNTTC | 2 cut(s) | 521, 2178 |
| MscI | TGGCCA | 1 cut(s) | 1010 |
| Msp20I | TGGCCA | 1 cut(s) | 1010 |
| MspA1I | CMGCKG | 4 cut(s) | 13, 299, 470, 2149 |
| MspI | CCGG | 4 cut(s) | 35, 42, 65, 89 |
| MspR9I | CCNGG | 6 cut(s) | 36, 66, 89, 1435, 2265, 2760 |
| MunI | CAATTG | 1 cut(s) | 2468 |
| Mva1269I | GAATGC | 3 cut(s) | 265, 1661, 2620 |
| MvaI | CCWGG | 3 cut(s) | 1435, 2265, 2760 |
| MvnI | CGCG | 1 cut(s) | 13 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 176, 332, 436, 449, 1381, 1571, 2143, 2234, 3169 |
| NciI | CCSGG | 3 cut(s) | 36, 66, 89 |
| NlaIV | GGNNCC | 2 cut(s) | 40, 3114 |
| NmeAIII | GCCGAG | 1 cut(s) | 1333 |
| NmuCI | GTSAC | 1 cut(s) | 95 |
| NsiI | ATGCAT | 2 cut(s) | 337, 432 |
| NspI | RCATGY | 2 cut(s) | 335, 2885 |
| PaeR7I | CTCGAG | 1 cut(s) | 1961 |
| PagI | TCATGA | 1 cut(s) | 1773 |
| PciSI | GCTCTTC | 1 cut(s) | 1677 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 23, 68, 586 |
| PctI | GAATGC | 3 cut(s) | 265, 1661, 2620 |
| PdmI | GAANNNNTTC | 2 cut(s) | 521, 2178 |
| PfoI | TCCNGGA | 1 cut(s) | 2758 |
| PleI | GAGTC | 5 cut(s) | 15, 151, 398, 2864, 2911 |
| PpsI | GAGTC | 5 cut(s) | 15, 151, 398, 2864, 2911 |
| Ppu21I | YACGTR | 1 cut(s) | 494 |
| Psp6I | CCWGG | 3 cut(s) | 1433, 2263, 2758 |
| PspFI | CCCAGC | 1 cut(s) | 128 |
| PspGI | CCWGG | 3 cut(s) | 1433, 2263, 2758 |
| PspN4I | GGNNCC | 2 cut(s) | 40, 3114 |
| PspPI | GGNCC | 2 cut(s) | 877, 1786 |
| PspXI | VCTCGAGB | 1 cut(s) | 1961 |
| PstI | CTGCAG | 1 cut(s) | 1567 |
| PstNI | CAGNNNCTG | 2 cut(s) | 449, 817 |
| PsuI | RGATCY | 3 cut(s) | 1168, 1186, 1480 |
| PvuII | CAGCTG | 1 cut(s) | 470 |
| RsaI | GTAC | 2 cut(s) | 1730, 2570 |
| RsaNI | GTAC | 2 cut(s) | 1729, 2569 |
| SacII | CCGCGG | 1 cut(s) | 14 |
| SapI | GCTCTTC | 1 cut(s) | 1677 |
| Sau96I | GGNCC | 2 cut(s) | 877, 1786 |
| SchI | GAGTC | 5 cut(s) | 16, 152, 399, 2864, 2912 |
| ScrFI | CCNGG | 6 cut(s) | 36, 66, 89, 1435, 2265, 2760 |
| SduI | GDGCHC | 2 cut(s) | 41, 89 |
| SfcI | CTRYAG | 2 cut(s) | 1563, 1817 |
| Sfr274I | CTCGAG | 1 cut(s) | 1961 |
| Sfr303I | CCGCGG | 1 cut(s) | 14 |
| SgrBI | CCGCGG | 1 cut(s) | 14 |
| SlaI | CTCGAG | 1 cut(s) | 1961 |
| SmlI | CTYRAG | 5 cut(s) | 698, 1319, 1496, 1961, 2819 |
| SmoI | CTYRAG | 5 cut(s) | 698, 1319, 1496, 1961, 2819 |
| SpeI | ACTAGT | 1 cut(s) | 3199 |
| SsiI | CCGC | 9 cut(s) | 11, 13, 115, 297, 361, 1624, 1762, 1795, 2149 |
| SspI | AATATT | 2 cut(s) | 859, 2836 |
| SspMI | CTAG | 6 cut(s) | 1376, 1394, 1484, 2358, 2826, 3200 |
| StyD4I | CCNGG | 6 cut(s) | 34, 64, 87, 1433, 2263, 2758 |
| StyI | CCWWGG | 1 cut(s) | 3153 |
| TaaI | ACNGT | 8 cut(s) | 317, 590, 1880, 2199, 2451, 2804, 2866, 2984 |
| TaiI | ACGT | 2 cut(s) | 496, 1831 |
| TatI | WGTACW | 1 cut(s) | 1728 |
| TauI | GCSGC | 2 cut(s) | 118, 1765 |
| TscAI | CASTG | 5 cut(s) | 532, 2388, 2437, 2869, 2989 |
| TseFI | GTSAC | 1 cut(s) | 95 |
| Tsp45I | GTSAC | 1 cut(s) | 95 |
| TspRI | CASTG | 5 cut(s) | 532, 2388, 2437, 2869, 2989 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1700 |
| XapI | RAATTY | 6 cut(s) | 521, 893, 1082, 1427, 2958, 3100 |
| XbaI | TCTAGA | 1 cut(s) | 1483 |
| XceI | RCATGY | 2 cut(s) | 335, 2885 |
| XhoI | CTCGAG | 1 cut(s) | 1961 |
| XmnI | GAANNNNTTC | 2 cut(s) | 521, 2178 |
| XspI | CTAG | 6 cut(s) | 1376, 1394, 1484, 2358, 2826, 3200 |
| Zsp2I | ATGCAT | 2 cut(s) | 337, 432 |