nuclear matrix constituent protein 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G65770 AT5G65770 AT5G65770 AT5G65780 |
| fragaria_vesca | FvH4_1g18512 FvH4_1g18512 |
| malus_domestica | MD02G1191400.v1.1 MD15G1302600.v1.1 |
| prunus_persica | Prupe.6G214100_v2.0.a1 Prupe.6G214100_v2.0.a1 |
| pyrus_communis | pycom15g26560 |
| rosa_chinensis | RchiOBHm_Chr2g0109151 |
| rosa_laevigata | RLG00000017717 |
| rosa_multiflora | Rmu_sc0000186.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00134460 |
| rosa_rugosa | Rorug02G0157500 Rorug02G0157500 Rorug02G0157500 Rorug02G0157600 |
| rosa_samantha | Rh2AG209600 Rh2BG220000 Rh2CG212100 Rh2DG215700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 2275 |
| AccII | CGCG | 1 cut(s) | 1833 |
| AciI | CCGC | 4 cut(s) | 11, 1861, 2093, 3198 |
| AclWI | GGATC | 5 cut(s) | 1179, 2073, 2088, 2813, 2949 |
| AcsI | RAATTY | 5 cut(s) | 524, 1085, 1961, 2720, 2976 |
| AcuI | CTGAAG | 5 cut(s) | 372, 510, 1370, 2225, 3012 |
| AcvI | CACGTG | 1 cut(s) | 629 |
| AfaI | GTAC | 2 cut(s) | 2588, 2934 |
| AfeI | AGCGCT | 1 cut(s) | 2447 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 44, 382, 790, 1198, 1705, 2675 |
| AflII | CTTAAG | 2 cut(s) | 1982, 2846 |
| AflIII | ACRYGT | 1 cut(s) | 2758 |
| AjiI | CACGTC | 1 cut(s) | 1105 |
| AjnI | CCWGG | 6 cut(s) | 67, 1436, 2766, 2834, 2922, 3141 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1856, 1888, 2169, 2201 |
| AleI | CACNNNNGTG | 2 cut(s) | 318, 1737 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 25, 57, 2109, 2141 |
| Alw21I | GWGCWC | 4 cut(s) | 55, 517, 1394, 3171 |
| Alw26I | GTCTC | 6 cut(s) | 290, 700, 2033, 2478, 2620, 2675 |
| AlwI | GGATC | 5 cut(s) | 1179, 2073, 2088, 2813, 2949 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 452, 820, 2546 |
| Ama87I | CYCGRG | 1 cut(s) | 2520 |
| Aor51HI | AGCGCT | 1 cut(s) | 2447 |
| AoxI | GGCC | 1 cut(s) | 540 |
| ApeKI | GCWGC | 9 cut(s) | 170, 329, 470, 547, 739, 1994, 2228, 2283, 2448 |
| ApoI | RAATTY | 5 cut(s) | 524, 1085, 1961, 2720, 2976 |
| AseI | ATTAAT | 1 cut(s) | 1601 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 524, 2181 |
| AspLEI | GCGC | 5 cut(s) | 74, 175, 1835, 2448, 3097 |
| AspS9I | GGNCC | 1 cut(s) | 2125 |
| AsuC2I | CCSGG | 2 cut(s) | 39, 46 |
| AsuHPI | GGTGA | 7 cut(s) | 209, 581, 2598, 2654, 2665, 2690, 2741 |
| AvaI | CYCGRG | 1 cut(s) | 2520 |
| AvaII | GGWCC | 1 cut(s) | 2125 |
| AxyI | CCTNAGG | 1 cut(s) | 1700 |
| BanI | GGYRCC | 1 cut(s) | 2275 |
| BanII | GRGCYC | 5 cut(s) | 55, 92, 883, 1528, 2835 |
| BbrPI | CACGTG | 1 cut(s) | 629 |
| BbsI | GAAGAC | 3 cut(s) | 227, 1416, 3130 |
| Bbv12I | GWGCWC | 4 cut(s) | 55, 517, 1394, 3171 |
| BbvCI | CCTCAGC | 2 cut(s) | 537, 1548 |
| BbvI | GCAGC | 9 cut(s) | 157, 316, 457, 534, 751, 2006, 2215, 2295, 2435 |
| BccI | CCATC | 5 cut(s) | 884, 1537, 1780, 2720, 2974 |
| BciT130I | CCWGG | 6 cut(s) | 69, 1438, 2768, 2836, 2924, 3143 |
| BclI | TGATCA | 4 cut(s) | 214, 322, 2338, 2971 |
| BcnI | CCSGG | 2 cut(s) | 39, 46 |
| BcoDI | GTCTC | 6 cut(s) | 290, 700, 2033, 2478, 2620, 2675 |
| BfaI | CTAG | 9 cut(s) | 30, 75, 579, 884, 1487, 2298, 2418, 2610, 2936 |
| BfmI | CTRYAG | 6 cut(s) | 83, 737, 1196, 1566, 1625, 2449 |
| BfoI | RGCGCY | 2 cut(s) | 75, 2449 |
| BfrI | CTTAAG | 2 cut(s) | 1982, 2846 |
| BglII | AGATCT | 1 cut(s) | 1483 |
| BisI | GCNGC | 9 cut(s) | 171, 330, 471, 548, 740, 1995, 2229, 2284, 2449 |
| BlpI | GCTNAGC | 1 cut(s) | 192 |
| BlsI | GCNGC | 9 cut(s) | 172, 331, 472, 549, 741, 1996, 2230, 2285, 2450 |
| BmcAI | AGTACT | 1 cut(s) | 2934 |
| Bme1390I | CCNGG | 8 cut(s) | 39, 46, 69, 1438, 2768, 2836, 2924, 3143 |
| Bme18I | GGWCC | 1 cut(s) | 2125 |
| BmeT110I | CYCGRG | 1 cut(s) | 2520 |
| BmgBI | CACGTC | 1 cut(s) | 1105 |
| BmgT120I | GGNCC | 1 cut(s) | 2125 |
| BmiI | GGNNCC | 4 cut(s) | 43, 2126, 2277, 2667 |
| BmrFI | CCNGG | 8 cut(s) | 39, 46, 69, 1438, 2768, 2836, 2924, 3143 |
| BmrI | ACTGGG | 1 cut(s) | 3211 |
| BmuI | ACTGGG | 1 cut(s) | 3211 |
| BpiI | GAAGAC | 3 cut(s) | 227, 1416, 3130 |
| BpmI | CTGGAG | 1 cut(s) | 926 |
| Bpu10I | CCTNAGC | 3 cut(s) | 537, 1045, 1548 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 192 |
| BpuEI | CTTGAG | 3 cut(s) | 722, 2057, 2849 |
| BpuMI | CCSGG | 2 cut(s) | 39, 46 |
| BsaAI | YACGTR | 1 cut(s) | 629 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1176 |
| BsaJI | CCNNGG | 7 cut(s) | 1395, 1437, 2767, 2834, 2922, 3121, 3142 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 44, 382, 790, 1198, 1705, 2675 |
| Bse1I | ACTGG | 4 cut(s) | 414, 3061, 3067, 3217 |
| Bse21I | CCTNAGG | 1 cut(s) | 1700 |
| Bse3DI | GCAATG | 3 cut(s) | 177, 2960, 3082 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1176 |
| BseBI | CCWGG | 6 cut(s) | 69, 1438, 2768, 2836, 2924, 3143 |
| BseDI | CCNNGG | 7 cut(s) | 1395, 1437, 2767, 2834, 2922, 3121, 3142 |
| BseGI | GGATG | 2 cut(s) | 1690, 3194 |
| BseJI | GATNNNNATC | 1 cut(s) | 1176 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 44, 382, 790, 1198, 1705, 2675 |
| BseMI | GCAATG | 3 cut(s) | 177, 2960, 3082 |
| BseNI | ACTGG | 4 cut(s) | 414, 3061, 3067, 3217 |
| BseRI | GAGGAG | 4 cut(s) | 158, 383, 953, 1667 |
| BseXI | GCAGC | 9 cut(s) | 157, 316, 457, 534, 751, 2006, 2215, 2295, 2435 |
| BsgI | GTGCAG | 1 cut(s) | 465 |
| Bsh1236I | CGCG | 1 cut(s) | 1833 |
| BshFI | GGCC | 1 cut(s) | 542 |
| BshNI | GGYRCC | 1 cut(s) | 2275 |
| BsiHKAI | GWGCWC | 4 cut(s) | 55, 517, 1394, 3171 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2520 |
| BsiSI | CCGG | 3 cut(s) | 38, 45, 2287 |
| BslFI | GGGAC | 2 cut(s) | 176, 3199 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 44, 382, 790, 1198, 1705, 2675 |
| BsmAI | GTCTC | 6 cut(s) | 290, 700, 2033, 2478, 2620, 2675 |
| BsmFI | GGGAC | 2 cut(s) | 176, 3199 |
| BsmI | GAATGC | 1 cut(s) | 2638 |
| BsnI | GGCC | 1 cut(s) | 542 |
| BsoBI | CYCGRG | 1 cut(s) | 2520 |
| Bsp1286I | GDGCHC | 8 cut(s) | 55, 92, 517, 883, 1394, 1528, 2835, 3171 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 192 |
| Bsp19I | CCATGG | 1 cut(s) | 3121 |
| BspACI | CCGC | 4 cut(s) | 11, 1861, 2093, 3198 |
| BspANI | GGCC | 1 cut(s) | 542 |
| BspFNI | CGCG | 1 cut(s) | 1833 |
| BspHI | TCATGA | 2 cut(s) | 1776, 1792 |
| BspLI | GGNNCC | 4 cut(s) | 43, 2126, 2277, 2667 |
| BspMAI | CTGCAG | 4 cut(s) | 87, 741, 1200, 2453 |
| BspPI | GGATC | 5 cut(s) | 1179, 2073, 2088, 2813, 2949 |
| BspQI | GCTCTTC | 1 cut(s) | 1614 |
| BspT107I | GGYRCC | 1 cut(s) | 2275 |
| BspTI | CTTAAG | 2 cut(s) | 1982, 2846 |
| BsrDI | GCAATG | 3 cut(s) | 177, 2960, 3082 |
| BsrI | ACTGG | 4 cut(s) | 414, 3061, 3067, 3217 |
| BssECI | CCNNGG | 7 cut(s) | 1395, 1437, 2767, 2834, 2922, 3121, 3142 |
| BssT1I | CCWWGG | 2 cut(s) | 1395, 3121 |
| Bst2UI | CCWGG | 6 cut(s) | 69, 1438, 2768, 2836, 2924, 3143 |
| Bst6I | CTCTTC | 9 cut(s) | 396, 949, 1500, 1614, 1859, 1896, 2172, 2779, 2988 |
| BstAFI | CTTAAG | 2 cut(s) | 1982, 2846 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 439, 452 |
| BstBAI | YACGTR | 1 cut(s) | 629 |
| BstC8I | GCNNGC | 6 cut(s) | 133, 444, 570, 1051, 1149, 2166 |
| BstDSI | CCRYGG | 1 cut(s) | 3121 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 380, 1196, 1703 |
| BstF5I | GGATG | 2 cut(s) | 1690, 3194 |
| BstFNI | CGCG | 1 cut(s) | 1833 |
| BstH2I | RGCGCY | 2 cut(s) | 75, 2449 |
| BstHHI | GCGC | 5 cut(s) | 74, 175, 1835, 2448, 3097 |
| BstMAI | GTCTC | 6 cut(s) | 290, 700, 2033, 2478, 2620, 2675 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 179, 188, 439, 452, 1729, 3072, 3081 |
| BstNI | CCWGG | 6 cut(s) | 69, 1438, 2768, 2836, 2924, 3143 |
| BstNSI | RCATGY | 6 cut(s) | 554, 1646, 2168, 2762, 2897, 3209 |
| BstSCI | CCNGG | 8 cut(s) | 37, 44, 67, 1436, 2766, 2834, 2922, 3141 |
| BstSFI | CTRYAG | 6 cut(s) | 83, 737, 1196, 1566, 1625, 2449 |
| BstUI | CGCG | 1 cut(s) | 1833 |
| BstV1I | GCAGC | 9 cut(s) | 157, 316, 457, 534, 751, 2006, 2215, 2295, 2435 |
| BstV2I | GAAGAC | 3 cut(s) | 227, 1416, 3130 |
| BstX2I | RGATCY | 2 cut(s) | 1171, 1483 |
| BstYI | RGATCY | 2 cut(s) | 1171, 1483 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1700 |
| BsuRI | GGCC | 1 cut(s) | 542 |
| BtgI | CCRYGG | 1 cut(s) | 3121 |
| BtrI | CACGTC | 1 cut(s) | 1105 |
| BtsCI | GGATG | 2 cut(s) | 1690, 3194 |
| BtsI | GCAGTG | 1 cut(s) | 2905 |
| BtsIMutI | CAGTG | 7 cut(s) | 103, 528, 1394, 2700, 2874, 2905, 3169 |
| Cac8I | GCNNGC | 6 cut(s) | 133, 444, 570, 1051, 1149, 2166 |
| CaiI | CAGNNNCTG | 3 cut(s) | 452, 820, 2546 |
| CciI | TCATGA | 2 cut(s) | 1776, 1792 |
| CfoI | GCGC | 5 cut(s) | 74, 175, 1835, 2448, 3097 |
| Cfr13I | GGNCC | 1 cut(s) | 2125 |
| CseI | GACGC | 2 cut(s) | 107, 2232 |
| Csp6I | GTAC | 2 cut(s) | 2587, 2933 |
| CviQI | GTAC | 2 cut(s) | 2587, 2933 |
| DraI | TTTAAA | 1 cut(s) | 2467 |
| Eam1104I | CTCTTC | 9 cut(s) | 396, 949, 1500, 1614, 1859, 1896, 2172, 2779, 2988 |
| EarI | CTCTTC | 9 cut(s) | 396, 949, 1500, 1614, 1859, 1896, 2172, 2779, 2988 |
| EciI | GGCGGA | 1 cut(s) | 2108 |
| Ecl136II | GAGCTC | 1 cut(s) | 53 |
| Eco130I | CCWWGG | 2 cut(s) | 1395, 3121 |
| Eco24I | GRGCYC | 5 cut(s) | 55, 92, 883, 1528, 2835 |
| Eco47I | GGWCC | 1 cut(s) | 2125 |
| Eco47III | AGCGCT | 1 cut(s) | 2447 |
| Eco53kI | GAGCTC | 1 cut(s) | 53 |
| Eco57I | CTGAAG | 5 cut(s) | 372, 510, 1370, 2225, 3012 |
| Eco72I | CACGTG | 1 cut(s) | 629 |
| Eco81I | CCTNAGG | 1 cut(s) | 1700 |
| Eco88I | CYCGRG | 1 cut(s) | 2520 |
| EcoICRI | GAGCTC | 1 cut(s) | 53 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 380, 1196, 1703 |
| EcoRII | CCWGG | 6 cut(s) | 67, 1436, 2766, 2834, 2922, 3141 |
| EcoT14I | CCWWGG | 2 cut(s) | 1395, 3121 |
| EcoT22I | ATGCAT | 1 cut(s) | 435 |
| EcoT38I | GRGCYC | 5 cut(s) | 55, 92, 883, 1528, 2835 |
| ErhI | CCWWGG | 2 cut(s) | 1395, 3121 |
| FaqI | GGGAC | 2 cut(s) | 176, 3199 |
| FauNDI | CATATG | 1 cut(s) | 334 |
| FbaI | TGATCA | 4 cut(s) | 214, 322, 2338, 2971 |
| Fnu4HI | GCNGC | 9 cut(s) | 171, 330, 471, 548, 740, 1995, 2229, 2284, 2449 |
| FokI | GGATG | 2 cut(s) | 1697, 3181 |
| FriOI | GRGCYC | 5 cut(s) | 55, 92, 883, 1528, 2835 |
| Fsp4HI | GCNGC | 9 cut(s) | 171, 330, 471, 548, 740, 1995, 2229, 2284, 2449 |
| FspBI | CTAG | 9 cut(s) | 30, 75, 579, 884, 1487, 2298, 2418, 2610, 2936 |
| GlaI | GCGC | 5 cut(s) | 73, 174, 1834, 2447, 3096 |
| GluI | GCNGC | 9 cut(s) | 171, 330, 471, 548, 740, 1995, 2229, 2284, 2449 |
| GsuI | CTGGAG | 1 cut(s) | 926 |
| HaeII | RGCGCY | 2 cut(s) | 75, 2449 |
| HaeIII | GGCC | 1 cut(s) | 542 |
| HapII | CCGG | 3 cut(s) | 38, 45, 2287 |
| HgaI | GACGC | 2 cut(s) | 107, 2232 |
| HhaI | GCGC | 5 cut(s) | 74, 175, 1835, 2448, 3097 |
| Hin6I | GCGC | 5 cut(s) | 72, 173, 1833, 2446, 3095 |
| HinP1I | GCGC | 5 cut(s) | 72, 173, 1833, 2446, 3095 |
| HincII | GTYRAC | 3 cut(s) | 2319, 2791, 2919 |
| HindII | GTYRAC | 3 cut(s) | 2319, 2791, 2919 |
| HindIII | AAGCTT | 2 cut(s) | 194, 960 |
| HpaI | GTTAAC | 1 cut(s) | 2319 |
| HpaII | CCGG | 3 cut(s) | 38, 45, 2287 |
| HphI | GGTGA | 7 cut(s) | 209, 581, 2598, 2654, 2665, 2690, 2741 |
| Hpy166II | GTNNAC | 6 cut(s) | 2319, 2589, 2645, 2791, 2881, 2919 |
| Hpy8I | GTNNAC | 6 cut(s) | 2319, 2589, 2645, 2791, 2881, 2919 |
| HpyCH4IV | ACGT | 2 cut(s) | 628, 1104 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 179, 188, 439, 452, 1729, 3072, 3081 |
| HpySE526I | ACGT | 2 cut(s) | 628, 1104 |
| HspAI | GCGC | 5 cut(s) | 72, 173, 1833, 2446, 3095 |
| Ksp22I | TGATCA | 4 cut(s) | 214, 322, 2338, 2971 |
| KspAI | GTTAAC | 1 cut(s) | 2319 |
| LguI | GCTCTTC | 1 cut(s) | 1614 |
| LmnI | GCTCC | 7 cut(s) | 871, 907, 1096, 1207, 1397, 2095, 3146 |
| Lsp1109I | GCAGC | 9 cut(s) | 157, 316, 457, 534, 751, 2006, 2215, 2295, 2435 |
| MaeI | CTAG | 9 cut(s) | 30, 75, 579, 884, 1487, 2298, 2418, 2610, 2936 |
| MaeII | ACGT | 2 cut(s) | 628, 1104 |
| MaeIII | GTNAC | 2 cut(s) | 2542, 3160 |
| MfeI | CAATTG | 2 cut(s) | 1226, 2109 |
| MflI | RGATCY | 2 cut(s) | 1171, 1483 |
| MhlI | GDGCHC | 8 cut(s) | 55, 92, 517, 883, 1394, 1528, 2835, 3171 |
| MlyI | GAGTC | 4 cut(s) | 16, 28, 155, 402 |
| MmeI | TCCRAC | 1 cut(s) | 3133 |
| Mph1103I | ATGCAT | 1 cut(s) | 435 |
| MroXI | GAANNNNTTC | 2 cut(s) | 524, 2181 |
| MslI | CAYNNNNRTG | 2 cut(s) | 318, 1737 |
| MspCI | CTTAAG | 2 cut(s) | 1982, 2846 |
| MspI | CCGG | 3 cut(s) | 38, 45, 2287 |
| MspR9I | CCNGG | 8 cut(s) | 39, 46, 69, 1438, 2768, 2836, 2924, 3143 |
| MunI | CAATTG | 2 cut(s) | 1226, 2109 |
| Mva1269I | GAATGC | 1 cut(s) | 2638 |
| MvaI | CCWGG | 6 cut(s) | 69, 1438, 2768, 2836, 2924, 3143 |
| MvnI | CGCG | 1 cut(s) | 1833 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 179, 188, 439, 452, 1729, 3072, 3081 |
| NciI | CCSGG | 2 cut(s) | 39, 46 |
| NcoI | CCATGG | 1 cut(s) | 3121 |
| NdeI | CATATG | 1 cut(s) | 334 |
| NlaIV | GGNNCC | 4 cut(s) | 43, 2126, 2277, 2667 |
| NsiI | ATGCAT | 1 cut(s) | 435 |
| NspI | RCATGY | 6 cut(s) | 554, 1646, 2168, 2762, 2897, 3209 |
| OliI | CACNNNNGTG | 2 cut(s) | 318, 1737 |
| PaeI | GCATGC | 1 cut(s) | 2168 |
| PagI | TCATGA | 2 cut(s) | 1776, 1792 |
| PciI | ACATGT | 1 cut(s) | 2758 |
| PciSI | GCTCTTC | 1 cut(s) | 1614 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 589 |
| PctI | GAATGC | 1 cut(s) | 2638 |
| PdmI | GAANNNNTTC | 2 cut(s) | 524, 2181 |
| PfoI | TCCNGGA | 1 cut(s) | 44 |
| PkrI | GCNGC | 9 cut(s) | 172, 331, 472, 549, 741, 1996, 2230, 2285, 2450 |
| PleI | GAGTC | 4 cut(s) | 15, 28, 154, 401 |
| PmaCI | CACGTG | 1 cut(s) | 629 |
| PmlI | CACGTG | 1 cut(s) | 629 |
| PpsI | GAGTC | 4 cut(s) | 15, 28, 154, 401 |
| Ppu21I | YACGTR | 1 cut(s) | 629 |
| PscI | ACATGT | 1 cut(s) | 2758 |
| PshBI | ATTAAT | 1 cut(s) | 1601 |
| Psp124BI | GAGCTC | 1 cut(s) | 55 |
| Psp6I | CCWGG | 6 cut(s) | 67, 1436, 2766, 2834, 2922, 3141 |
| PspCI | CACGTG | 1 cut(s) | 629 |
| PspGI | CCWGG | 6 cut(s) | 67, 1436, 2766, 2834, 2922, 3141 |
| PspN4I | GGNNCC | 4 cut(s) | 43, 2126, 2277, 2667 |
| PspPI | GGNCC | 1 cut(s) | 2125 |
| PstI | CTGCAG | 4 cut(s) | 87, 741, 1200, 2453 |
| PstNI | CAGNNNCTG | 3 cut(s) | 452, 820, 2546 |
| PsuI | RGATCY | 2 cut(s) | 1171, 1483 |
| RsaI | GTAC | 2 cut(s) | 2588, 2934 |
| RsaNI | GTAC | 2 cut(s) | 2587, 2933 |
| RseI | CAYNNNNRTG | 2 cut(s) | 318, 1737 |
| SacI | GAGCTC | 1 cut(s) | 55 |
| SapI | GCTCTTC | 1 cut(s) | 1614 |
| SatI | GCNGC | 9 cut(s) | 171, 330, 471, 548, 740, 1995, 2229, 2284, 2449 |
| Sau96I | GGNCC | 1 cut(s) | 2125 |
| ScaI | AGTACT | 1 cut(s) | 2934 |
| SchI | GAGTC | 4 cut(s) | 16, 28, 155, 402 |
| ScrFI | CCNGG | 8 cut(s) | 39, 46, 69, 1438, 2768, 2836, 2924, 3143 |
| SduI | GDGCHC | 8 cut(s) | 55, 92, 517, 883, 1394, 1528, 2835, 3171 |
| SfcI | CTRYAG | 6 cut(s) | 83, 737, 1196, 1566, 1625, 2449 |
| SinI | GGWCC | 1 cut(s) | 2125 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 318, 1737 |
| SmlI | CTYRAG | 5 cut(s) | 701, 1982, 2036, 2828, 2846 |
| SmoI | CTYRAG | 5 cut(s) | 701, 1982, 2036, 2828, 2846 |
| SphI | GCATGC | 1 cut(s) | 2168 |
| SsiI | CCGC | 4 cut(s) | 11, 1861, 2093, 3198 |
| SspI | AATATT | 1 cut(s) | 1972 |
| SspMI | CTAG | 9 cut(s) | 30, 75, 579, 884, 1487, 2298, 2418, 2610, 2936 |
| SstI | GAGCTC | 1 cut(s) | 55 |
| StyD4I | CCNGG | 8 cut(s) | 37, 44, 67, 1436, 2766, 2834, 2922, 3141 |
| StyI | CCWWGG | 2 cut(s) | 1395, 3121 |
| TaiI | ACGT | 2 cut(s) | 631, 1107 |
| TaqI | TCGA | 7 cut(s) | 59, 149, 428, 808, 826, 864, 2329 |
| TatI | WGTACW | 1 cut(s) | 2932 |
| TscAI | CASTG | 7 cut(s) | 103, 535, 1394, 2707, 2881, 2912, 3176 |
| TseI | GCWGC | 9 cut(s) | 170, 329, 470, 547, 739, 1994, 2228, 2283, 2448 |
| TspGWI | ACGGA | 2 cut(s) | 511, 2507 |
| TspRI | CASTG | 7 cut(s) | 103, 535, 1394, 2707, 2881, 2912, 3176 |
| Vha464I | CTTAAG | 2 cut(s) | 1982, 2846 |
| VpaK11BI | GGWCC | 1 cut(s) | 2125 |
| VspI | ATTAAT | 1 cut(s) | 1601 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 380, 1196, 1703 |
| XapI | RAATTY | 5 cut(s) | 524, 1085, 1961, 2720, 2976 |
| XbaI | TCTAGA | 1 cut(s) | 1486 |
| XceI | RCATGY | 6 cut(s) | 554, 1646, 2168, 2762, 2897, 3209 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 3128, 3149 |
| XmnI | GAANNNNTTC | 2 cut(s) | 524, 2181 |
| XspI | CTAG | 9 cut(s) | 30, 75, 579, 884, 1487, 2298, 2418, 2610, 2936 |
| ZrmI | AGTACT | 1 cut(s) | 2934 |
| Zsp2I | ATGCAT | 1 cut(s) | 435 |