RLG00000017717

nuclear matrix constituent protein 1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
20389889 .. 20395711
5823 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017717

Sequence Viewer

Length: 3354 bp
ATGGCGAGTCCGCGATCGGAAGTTTTCGCGAGGACGCCAGGTTCCGGTAGAGGTCTGTCGATAACGCCGGGGTCGAGAATCTTGCAGAGTCCGGTGAGTGACGAAGCGATCTGGAAGCGGCTTAAGGAGGCTGGGTTTGATGAGGAGTCGATTAAGCGGAGGGACAAGGCTGCGCTCATTGCTTATATTGCTAAGCTCGAAGCTGAGATTTTCGACCACCAACACCACATGGGTCTTCTCATAATGGAAAAGAAGAGGTTGGATTCCGAGTATGAGCAACTTAAAGCCTCTTCTGAGACAGCCGAACTTAGATATAACCGTAATCAAGCTGCACATGCATCTGCTTTGGCTGAAGCAAGGAAGCTGGAGGAGAGACTAAAGAAGGCACTAGGAGTCAAGGAAGAATGTATAGCTAGTATTGAGAAGTCAATGCATGAGATGCGTGCAGAATCTGCTGAAACAAAGGTTGCAGCTGAGTGTAAGTTGGCTGAAGCGCGTAATATTTTGGAGGATGCTCAGAAGAAATTCACTGAAGCTGAGGGAAAGCTACTCCTTGCAGAATCTTTGCAAGCAGAAGCTTCTCGTTATCACCGTGTTGCTGAAAGAAAGATGGTAGAAGTTGAAGCTCGTGAAGATGATCTTAGGAGGAACATTCTATCTTTCAAGACTGATTGTGATGAAAAAGAGAAGGAGATGAGCCTTGAGAGAAAATCTTTAAGTGAAAGGCAGAAATCCCTCCAGCAAGAACAGGATAGATTACTCGATGCGCAAGCTCTTCTTAACCAGAGGGAGGATATTATATTTGGTCGATCTCAGGACCTGAATCGACTTGAAAAAGAGTTGGAAGACCTGAAACTGAATATTGAGGAGGAGCGTAAAGCCCTAAATGATCAGAAATTTAATGTGGAGCTGACCGAGACTTCCCTTGCTAATAGAGAGGAGGCTTTAACTAGAAGAGAGGCTTTACTGAACAAAAAAGAACAAGAGCTTCTTGTTTTTCAGGAAAAACTGGCCAGCAAGGAATTTGAAGAGATTAAGAAAGCTGTTGCCATTCACGAAGTTGGTTTGAGAAAGAAGAAGTCTGAATTTGATGCAGAGCTGGAGGTGAAGTGCAAGCTGGTTGAAGCTGAAATTGAAACCAAGAGACGGGCTTGGGAGTTAAGGGAGGTGGATCTCAATCATCGAGAGGACCTACTGTGTGAAAAGGAATATGACTTCGAAGTTCAGATGAGGTCATTGGTGGAGAGGGAAAAAGATGTGTCAGAGAGGTCAAATCTTGTTGATGAGAAGGAAAAAAGTTTGAGAGCTGCTGAGAAGGAGCTTGAGCAGAATAACCTTCTTTTGCAAAAAGAAAAAGAAGAAAATATCAAATTGAAGCTAGAGCTGCAAAACTCCCTAGATTCACTTGAAGAGAAAAAGAAACAACTTGAATGTTCCAGGCAGGAGTTTGAGGTTTTGAAAACTGAAACAAGTGAGCTTTCAGATCTAGAAATGAAACTTAAGGAAGAGGTAGATTTGGTCAGGGCTCAAAAGCAAGAGCTGATGGCTGAGGCAGAAAAATTGGCTGCGGAGAAGGCCAAGTTTGAATCTGAGTGGGAATCGCTTGATGACAAGAGGGAAATGCTGCGGAAGGAAGCAGAGTGCGTAGCAGAGGAGAGGTTGGCATTCTCTAAGTTTATCAACGAAGAGCATGATAAATTAAAGCAGGAGAAGGATGAAATGTGGGATCAGTACAAACGTGATGCTGAATTACTTGTTGTTGAGCGGCAAGACTTCATGAATAAGATGACTCATGAGCGGTCTGAGTTATTCAGCAAGATGCAGCAAGAACGTGCTGATTTCTTGCTGGAAATTGATACCAGGAGGAGGGAGTTGGAGAACTGTATTGATAAAAAACATGAGGAGTTAGAATGTTCTTTGAAGGAAAAGGAGATGGTGTTTGAGCAAGAAAAGAAAAATCAACTTGAGTATATTAGTTCTCTCAACGAAAAAGCTGCAAAAGAGATGGAGGAGGTTTCTTTAGAAAGGAAAAGACTGGAAACTGAGAGAGTGGAGATAAATGTGGATCGTGAGCGAAGGAATCAGGAATGGGCTGAGCTAAATAATTCGATTGAGGAATTAAAGATTCAGAGGGAGAAGCTGAAGAAGCAGCGGGAATTATTGCATGCAGATAGTGAAGAGATTCATCGTCAAATTGAACACTTGAAGGAATTGGAGAGTTTGAAAGCTGCTTTAGATGCTGAGATGCAACGATCTGATTCTGTGCCCAGCAACCCAGAAACTTCTACAAGATATTTGAAGCAGGCAACATCAATACAAGAAGGTGATCCTCATGCACAGGATAAAGTAAATGTTGCCGACTCTAGCAACCCATCTATGCTAAAGGCAGTCTTTTCTCCTCCTAGTTCTGCCCGTTTCACTTGGTTAAAACGCTGCACTGAATTGGTTTTCAAGCAGTCTCCTGAGAAGCAACAATTGAAATATGAAGAAAGTCCTGTGATCTCTCGAAAAGAAGCAGGCTTGAAGGTAACTGAACAGATGGAGACATCAAGTAAATATGATGGGCATAGGTACATGGGAAATGGTCATTCATCCGGAAGTTTCAGCAAGAGGCAGAATGCTTTTGGCGAGCCAAAGGTGATAGTTGAAGTGCCTGTTGGTGAGAATGTAAAAGCAACAAATATTTCTGATTATGAATCCACTCATGACTCTGAATCTGCCGGTGAAAGGTGTGCCCCCTTAATTTCTGAAAAAGTTGTCCCGGGAGGAAGGAAAAGAAGAGTTGAAAAATCTTCTTCCAATGACTGTTTTGATCAGAATATTAAGAAAAGGAGGCAAGAAGTTGACACTGTAGATTCATTGGAATGTGCCATTACCCACTGCACTGTGTCAACCCAGACAAAAGTTCCAGAGCAGCAGCTTGAATCATTGCCATCTGATCAAATTTGTGAAGGTACTGTAGATGAGAGTGTTTTAGTAGTAGATAAAGTCATCAAAGTTTCAGAAGTGATTTGCGAGAGAACTGAGACACAAAGTTTTGCCAACGGGAACAAATTAGACGCACACAATTCTGTTGTGGAACCACACCATTTACAGAATAGTGTCTTAACCTCTGACCCCAAGGCTCAGGAAATGATACAAGAGTTAGACCTGGGGAATGTTGGACTAGTTAGTGACGATCATCAGCTTGAAGAGAAAGAAATAACTGAAAAGCATTTGCAGTCCGCATTGTCAGACGTGCATCACTTACCTGAAGGTTATCAACATTTAAAGAGGCTCCGTTTGCATGGCTTGTATGCTGGATTGGGTAGTTATGGCAAACCCAGTGGAGTGGTGTGTTGGCATCTTGTGTAA

Protein Analysis

1118

Amino Acids

129.15

Weight (kDa)

5.29

Isoelectric Point (pI)

57.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 768
AccBSI CCGCTC 2 cut(s) 1765, 1798
AccII CGCG 3 cut(s) 13, 29, 496
AccIII TCCGGA 1 cut(s) 2594
AciI CCGC 9 cut(s) 11, 118, 157, 1568, 1627, 1765, 1798, 2152, 3225
AclWI GGATC 4 cut(s) 1179, 1734, 2073, 2321
AcoI YGGCCR 1 cut(s) 1011
AcsI RAATTY 5 cut(s) 524, 896, 1022, 1085, 2943
AcuI CTGAAG 5 cut(s) 372, 510, 552, 2162, 3273
AcyI GRCGYC 1 cut(s) 35
AfaI GTAC 3 cut(s) 1733, 2573, 2956
AfiI CCNNNNNNNGG 5 cut(s) 44, 790, 1146, 1866, 2727
AflII CTTAAG 2 cut(s) 122, 1499
AhlI ACTAGT 1 cut(s) 3166
AjiI CACGTC 1 cut(s) 3238
AjnI CCWGG 4 cut(s) 37, 1436, 1859, 3150
AjuI GAANNNNNNNTTGG 2 cut(s) 2640, 2672
AloI GAACNNNNNNTCC 2 cut(s) 25, 57
Alw26I GTCTC 7 cut(s) 290, 367, 911, 1138, 2463, 2537, 3020
AlwI GGATC 4 cut(s) 1179, 1734, 2073, 2321
AlwNI CAGNNNCTG 2 cut(s) 452, 820
Ama87I CYCGRG 1 cut(s) 2761
Aor13HI TCCGGA 1 cut(s) 2594
AoxI GGCC 2 cut(s) 1011, 1575
ApoI RAATTY 5 cut(s) 524, 896, 1022, 1085, 2943
Asp700I GAANNNNTTC 2 cut(s) 524, 2181
AspLEI GCGC 3 cut(s) 175, 496, 769
AspS9I GGNCC 2 cut(s) 817, 1189
AsuC2I CCSGG 3 cut(s) 69, 2762, 2763
AsuHPI GGTGA 7 cut(s) 106, 581, 1117, 2336, 2650, 2672, 2735
AsuII TTCGAA 1 cut(s) 1218
AvaI CYCGRG 1 cut(s) 2761
AvaII GGWCC 2 cut(s) 817, 1189
BaeGI GKGCMC 2 cut(s) 2268, 2737
BaeI ACNNNNGTAYC 2 cut(s) 3128, 3161
BalI TGGCCA 1 cut(s) 1013
BanII GRGCYC 1 cut(s) 1528
BauI CACGAG 1 cut(s) 627
BbsI GAAGAC 2 cut(s) 227, 852
BbvCI CCTCAGC 2 cut(s) 537, 1548
BccI CCATC 8 cut(s) 604, 1537, 1927, 1999, 2380, 2533, 2555, 2941
BcgI CGANNNNNNTGC 4 cut(s) 64, 98, 1976, 2010
BciT130I CCWGG 4 cut(s) 39, 1438, 1861, 3152
BclI TGATCA 3 cut(s) 889, 2812, 2938
BcnI CCSGG 3 cut(s) 69, 2762, 2763
BcoDI GTCTC 7 cut(s) 290, 367, 911, 1138, 2463, 2537, 3020
BcuI ACTAGT 1 cut(s) 3166
BfaI CTAG 9 cut(s) 389, 414, 951, 1379, 1397, 1487, 2364, 2403, 3167
BfmI CTRYAG 2 cut(s) 2850, 2958
BfrI CTTAAG 2 cut(s) 122, 1499
BglII AGATCT 1 cut(s) 1483
BlpI GCTNAGC 2 cut(s) 192, 2094
Bme1390I CCNGG 7 cut(s) 39, 69, 1438, 1861, 2762, 2763, 3152
Bme18I GGWCC 2 cut(s) 817, 1189
BmeT110I CYCGRG 1 cut(s) 2761
BmgBI CACGTC 1 cut(s) 3238
BmgT120I GGNCC 2 cut(s) 817, 1189
BmiI GGNNCC 3 cut(s) 43, 3081, 3278
BmrFI CCNGG 7 cut(s) 39, 69, 1438, 1861, 2762, 2763, 3152
BmrI ACTGGG 1 cut(s) 3318
BmuI ACTGGG 1 cut(s) 3318
BpiI GAAGAC 2 cut(s) 227, 852
BpmI CTGGAG 3 cut(s) 386, 722, 1121
Bpu10I CCTNAGC 3 cut(s) 537, 1548, 3126
Bpu1102I GCTNAGC 2 cut(s) 192, 2094
Bpu14I TTCGAA 1 cut(s) 1218
BpuEI CTTGAG 3 cut(s) 722, 1343, 1985
BpuMI CCSGG 3 cut(s) 69, 2762, 2763
BsaBI GATNNNNATC 1 cut(s) 1176
BsaHI GRCGYC 1 cut(s) 35
BsaJI CCNNGG 4 cut(s) 68, 2761, 3120, 3151
BsaWI WCCGGW 3 cut(s) 44, 91, 2594
BsaXI ACNNNNNCTCC 6 cut(s) 119, 149, 1094, 1124, 1922, 1952
Bsc4I CCNNNNNNNGG 5 cut(s) 44, 790, 1146, 1866, 2727
Bse118I RCCGGY 1 cut(s) 2720
Bse1I ACTGG 3 cut(s) 1014, 2040, 3324
Bse3DI GCAATG 2 cut(s) 177, 2927
Bse8I GATNNNNATC 1 cut(s) 1176
BseAI TCCGGA 1 cut(s) 2594
BseBI CCWGG 4 cut(s) 39, 1438, 1861, 3152
BseDI CCNNGG 4 cut(s) 68, 2761, 3120, 3151
BseGI GGATG 3 cut(s) 517, 1720, 2591
BseJI GATNNNNATC 1 cut(s) 1176
BseLI CCNNNNNNNGG 5 cut(s) 44, 790, 1146, 1866, 2727
BseMI GCAATG 2 cut(s) 177, 2927
BseNI ACTGG 3 cut(s) 1014, 2040, 3324
BseSI GKGCMC 2 cut(s) 2268, 2737
BseYI CCCAGC 2 cut(s) 131, 2267
BsgI GTGCAG 4 cut(s) 315, 465, 2419, 2866
Bsh1236I CGCG 3 cut(s) 13, 29, 496
Bsh1285I CGRYCG 1 cut(s) 17
BshFI GGCC 2 cut(s) 1013, 1577
BsiEI CGRYCG 1 cut(s) 17
BsiHKCI CYCGRG 1 cut(s) 2761
BsiSI CCGG 6 cut(s) 45, 68, 92, 2595, 2721, 2762
BslFI GGGAC 2 cut(s) 176, 2744
BslI CCNNNNNNNGG 5 cut(s) 44, 790, 1146, 1866, 2727
BsmAI GTCTC 7 cut(s) 290, 367, 911, 1138, 2463, 2537, 3020
BsmBI CGTCTC 1 cut(s) 1138
BsmFI GGGAC 2 cut(s) 176, 2744
BsmI GAATGC 2 cut(s) 1664, 2623
BsnI GGCC 2 cut(s) 1013, 1577
BsoBI CYCGRG 1 cut(s) 2761
Bsp119I TTCGAA 1 cut(s) 1218
Bsp1286I GDGCHC 3 cut(s) 1528, 2268, 2737
Bsp13I TCCGGA 1 cut(s) 2594
Bsp1720I GCTNAGC 2 cut(s) 192, 2094
Bsp68I TCGCGA 1 cut(s) 29
BspACI CCGC 9 cut(s) 11, 118, 157, 1568, 1627, 1765, 1798, 2152, 3225
BspANI GGCC 2 cut(s) 1013, 1577
BspEI TCCGGA 1 cut(s) 2594
BspFNI CGCG 3 cut(s) 13, 29, 496
BspHI TCATGA 3 cut(s) 1776, 1792, 2704
BspLI GGNNCC 3 cut(s) 43, 3081, 3278
BspPI GGATC 4 cut(s) 1179, 1734, 2073, 2321
BspQI GCTCTTC 2 cut(s) 780, 1680
BspT104I TTCGAA 1 cut(s) 1218
BspTI CTTAAG 2 cut(s) 122, 1499
BsrBI CCGCTC 2 cut(s) 1765, 1798
BsrDI GCAATG 2 cut(s) 177, 2927
BsrFI RCCGGY 1 cut(s) 2720
BsrI ACTGG 3 cut(s) 1014, 2040, 3324
BssAI RCCGGY 1 cut(s) 2720
BssECI CCNNGG 4 cut(s) 68, 2761, 3120, 3151
BssNI GRCGYC 1 cut(s) 35
BssSI CACGAG 1 cut(s) 627
BssT1I CCWWGG 1 cut(s) 3120
Bst2BI CACGAG 1 cut(s) 627
Bst2UI CCWGG 4 cut(s) 39, 1438, 1861, 3152
Bst4CI ACNGT 8 cut(s) 320, 593, 1197, 1883, 2807, 2851, 2887, 2959
BstACI GRCGYC 1 cut(s) 35
BstAFI CTTAAG 2 cut(s) 122, 1499
BstAPI GCANNNNNTGC 2 cut(s) 439, 452
BstBI TTCGAA 1 cut(s) 1218
BstC8I GCNNGC 9 cut(s) 444, 570, 771, 1015, 1115, 2166, 2304, 2518, 2630
BstF5I GGATG 3 cut(s) 517, 1720, 2591
BstFNI CGCG 3 cut(s) 13, 29, 496
BstHHI GCGC 3 cut(s) 175, 496, 769
BstMAI GTCTC 7 cut(s) 290, 367, 911, 1138, 2463, 2537, 3020
BstMCI CGRYCG 1 cut(s) 17
BstNI CCWGG 4 cut(s) 39, 1438, 1861, 3152
BstNSI RCATGY 2 cut(s) 338, 2168
BstSCI CCNGG 7 cut(s) 37, 67, 1436, 1859, 2760, 2761, 3150
BstSFI CTRYAG 2 cut(s) 2850, 2958
BstSLI GKGCMC 2 cut(s) 2268, 2737
BstUI CGCG 3 cut(s) 13, 29, 496
BstV2I GAAGAC 2 cut(s) 227, 852
BstX2I RGATCY 2 cut(s) 1171, 1483
BstXI CCANNNNNNTGG 1 cut(s) 3331
BstYI RGATCY 2 cut(s) 1171, 1483
BsuRI GGCC 2 cut(s) 1013, 1577
BtrI CACGTC 1 cut(s) 3238
BtsCI GGATG 3 cut(s) 517, 1720, 2591
BtsI GCAGTG 1 cut(s) 2878
BtsIMutI CAGTG 6 cut(s) 528, 2436, 2847, 2878, 2883, 3331
BtuMI TCGCGA 1 cut(s) 29
Cac8I GCNNGC 9 cut(s) 444, 570, 771, 1015, 1115, 2166, 2304, 2518, 2630
CaiI CAGNNNCTG 2 cut(s) 452, 820
CciI TCATGA 3 cut(s) 1776, 1792, 2704
CfoI GCGC 3 cut(s) 175, 496, 769
Cfr10I RCCGGY 1 cut(s) 2720
Cfr13I GGNCC 2 cut(s) 817, 1189
Cfr9I CCCGGG 1 cut(s) 2761
CseI GACGC 2 cut(s) 43, 3068
Csp6I GTAC 3 cut(s) 1732, 2572, 2955
CspCI CAANNNNNGTGG 2 cut(s) 3307, 3342
CviQI GTAC 3 cut(s) 1732, 2572, 2955
DraI TTTAAA 1 cut(s) 3270
EaeI YGGCCR 1 cut(s) 1011
Eco130I CCWWGG 1 cut(s) 3120
Eco24I GRGCYC 1 cut(s) 1528
Eco47I GGWCC 2 cut(s) 817, 1189
Eco57I CTGAAG 5 cut(s) 372, 510, 552, 2162, 3273
Eco88I CYCGRG 1 cut(s) 2761
EcoO109I RGGNCCY 2 cut(s) 817, 1189
EcoRII CCWGG 4 cut(s) 37, 1436, 1859, 3150
EcoT14I CCWWGG 1 cut(s) 3120
EcoT22I ATGCAT 2 cut(s) 340, 435
EcoT38I GRGCYC 1 cut(s) 1528
ErhI CCWWGG 1 cut(s) 3120
Esp3I CGTCTC 1 cut(s) 1138
FaqI GGGAC 2 cut(s) 176, 2744
FauI CCCGC 1 cut(s) 2145
FbaI TGATCA 3 cut(s) 889, 2812, 2938
FokI GGATG 3 cut(s) 524, 1727, 2578
FriOI GRGCYC 1 cut(s) 1528
FspBI CTAG 9 cut(s) 389, 414, 951, 1379, 1397, 1487, 2364, 2403, 3167
FspI TGCGCA 1 cut(s) 768
GlaI GCGC 3 cut(s) 174, 495, 768
GsaI CCCAGC 2 cut(s) 135, 2271
GsuI CTGGAG 3 cut(s) 386, 722, 1121
HaeIII GGCC 2 cut(s) 1013, 1577
HapII CCGG 6 cut(s) 45, 68, 92, 2595, 2721, 2762
HgaI GACGC 2 cut(s) 43, 3068
HhaI GCGC 3 cut(s) 175, 496, 769
Hin1I GRCGYC 1 cut(s) 35
Hin6I GCGC 3 cut(s) 173, 494, 767
HinP1I GCGC 3 cut(s) 173, 494, 767
HincII GTYRAC 2 cut(s) 2845, 2892
HindII GTYRAC 2 cut(s) 2845, 2892
HindIII AAGCTT 1 cut(s) 576
HpaII CCGG 6 cut(s) 45, 68, 92, 2595, 2721, 2762
HphI GGTGA 7 cut(s) 106, 581, 1117, 2336, 2650, 2672, 2735
Hpy166II GTNNAC 2 cut(s) 2845, 2892
Hpy8I GTNNAC 2 cut(s) 2845, 2892
HpyCH4III ACNGT 8 cut(s) 320, 593, 1197, 1883, 2807, 2851, 2887, 2959
HpyCH4IV ACGT 3 cut(s) 1738, 1831, 3237
HpySE526I ACGT 3 cut(s) 1738, 1831, 3237
Hsp92I GRCGYC 1 cut(s) 35
HspAI GCGC 3 cut(s) 173, 494, 767
Kpn2I TCCGGA 1 cut(s) 2594
Ksp22I TGATCA 3 cut(s) 889, 2812, 2938
LguI GCTCTTC 2 cut(s) 780, 1680
LmnI GCTCC 4 cut(s) 871, 907, 1318, 3282
MaeI CTAG 9 cut(s) 389, 414, 951, 1379, 1397, 1487, 2364, 2403, 3167
MaeII ACGT 3 cut(s) 1738, 1831, 3237
MaeIII GTNAC 3 cut(s) 98, 2527, 3173
MbiI CCGCTC 2 cut(s) 1765, 1798
MfeI CAATTG 1 cut(s) 2474
MflI RGATCY 2 cut(s) 1171, 1483
MhlI GDGCHC 3 cut(s) 1528, 2268, 2737
MlsI TGGCCA 1 cut(s) 1013
MluNI TGGCCA 1 cut(s) 1013
MlyI GAGTC 7 cut(s) 16, 97, 155, 402, 1783, 2354, 2702
MmeI TCCRAC 4 cut(s) 240, 822, 1854, 3142
Mox20I TGGCCA 1 cut(s) 1013
Mph1103I ATGCAT 2 cut(s) 340, 435
MroI TCCGGA 1 cut(s) 2594
MroXI GAANNNNTTC 2 cut(s) 524, 2181
MscI TGGCCA 1 cut(s) 1013
MslI CAYNNNNRTG 1 cut(s) 2863
Msp20I TGGCCA 1 cut(s) 1013
MspA1I CMGCKG 2 cut(s) 473, 2152
MspCI CTTAAG 2 cut(s) 122, 1499
MspI CCGG 6 cut(s) 45, 68, 92, 2595, 2721, 2762
MspR9I CCNGG 7 cut(s) 39, 69, 1438, 1861, 2762, 2763, 3152
MunI CAATTG 1 cut(s) 2474
Mva1269I GAATGC 2 cut(s) 1664, 2623
MvaI CCWGG 4 cut(s) 39, 1438, 1861, 3152
MvnI CGCG 3 cut(s) 13, 29, 496
NciI CCSGG 3 cut(s) 69, 2762, 2763
NlaIV GGNNCC 3 cut(s) 43, 3081, 3278
NmuCI GTSAC 2 cut(s) 98, 3173
NruI TCGCGA 1 cut(s) 29
NsbI TGCGCA 1 cut(s) 768
NsiI ATGCAT 2 cut(s) 340, 435
NspI RCATGY 2 cut(s) 338, 2168
NspV TTCGAA 1 cut(s) 1218
PaeI GCATGC 1 cut(s) 2168
PagI TCATGA 3 cut(s) 1776, 1792, 2704
PciSI GCTCTTC 2 cut(s) 780, 1680
PcsI WCGNNNNNNNCGW 2 cut(s) 71, 589
PctI GAATGC 2 cut(s) 1664, 2623
PdmI GAANNNNTTC 2 cut(s) 524, 2181
Ple19I CGATCG 1 cut(s) 17
PleI GAGTC 7 cut(s) 15, 96, 154, 401, 1783, 2354, 2702
PpsI GAGTC 7 cut(s) 15, 96, 154, 401, 1783, 2354, 2702
PpuMI RGGWCCY 2 cut(s) 817, 1189
Psp5II RGGWCCY 2 cut(s) 817, 1189
Psp6I CCWGG 4 cut(s) 37, 1436, 1859, 3150
PspFI CCCAGC 2 cut(s) 131, 2267
PspGI CCWGG 4 cut(s) 37, 1436, 1859, 3150
PspN4I GGNNCC 3 cut(s) 43, 3081, 3278
PspPI GGNCC 2 cut(s) 817, 1189
PspPPI RGGWCCY 2 cut(s) 817, 1189
PstNI CAGNNNCTG 2 cut(s) 452, 820
PsuI RGATCY 2 cut(s) 1171, 1483
PvuI CGATCG 1 cut(s) 17
PvuII CAGCTG 1 cut(s) 473
RruI TCGCGA 1 cut(s) 29
RsaI GTAC 3 cut(s) 1733, 2573, 2956
RsaNI GTAC 3 cut(s) 1732, 2572, 2955
RseI CAYNNNNRTG 1 cut(s) 2863
SapI GCTCTTC 2 cut(s) 780, 1680
Sau96I GGNCC 2 cut(s) 817, 1189
SchI GAGTC 7 cut(s) 16, 97, 155, 402, 1783, 2354, 2702
ScrFI CCNGG 7 cut(s) 39, 69, 1438, 1861, 2762, 2763, 3152
SduI GDGCHC 3 cut(s) 1528, 2268, 2737
SfcI CTRYAG 2 cut(s) 2850, 2958
SfuI TTCGAA 1 cut(s) 1218
SinI GGWCC 2 cut(s) 817, 1189
SmaI CCCGGG 1 cut(s) 2763
SmiMI CAYNNNNRTG 1 cut(s) 2863
SmlI CTYRAG 5 cut(s) 122, 701, 1322, 1499, 1964
SmoI CTYRAG 5 cut(s) 122, 701, 1322, 1499, 1964
SpeI ACTAGT 1 cut(s) 3166
SphI GCATGC 1 cut(s) 2168
SsiI CCGC 9 cut(s) 11, 118, 157, 1568, 1627, 1765, 1798, 2152, 3225
SspI AATATT 4 cut(s) 502, 862, 2683, 2821
SspMI CTAG 9 cut(s) 389, 414, 951, 1379, 1397, 1487, 2364, 2403, 3167
StyD4I CCNGG 7 cut(s) 37, 67, 1436, 1859, 2760, 2761, 3150
StyI CCWWGG 1 cut(s) 3120
TaaI ACNGT 8 cut(s) 320, 593, 1197, 1883, 2807, 2851, 2887, 2959
TaiI ACGT 3 cut(s) 1741, 1834, 3240
TaqII GACCGA 1 cut(s) 929
TatI WGTACW 1 cut(s) 1731
TauI GCSGC 2 cut(s) 121, 1768
TscAI CASTG 6 cut(s) 535, 2443, 2854, 2885, 2890, 3331
TseFI GTSAC 2 cut(s) 98, 3173
Tsp45I GTSAC 2 cut(s) 98, 3173
TspGWI ACGGA 1 cut(s) 3269
TspMI CCCGGG 1 cut(s) 2761
TspRI CASTG 6 cut(s) 535, 2443, 2854, 2885, 2890, 3331
Vha464I CTTAAG 2 cut(s) 122, 1499
VpaK11BI GGWCC 2 cut(s) 817, 1189
XapI RAATTY 5 cut(s) 524, 896, 1022, 1085, 2943
XbaI TCTAGA 1 cut(s) 1486
XceI RCATGY 2 cut(s) 338, 2168
XmaI CCCGGG 1 cut(s) 2761
XmnI GAANNNNTTC 2 cut(s) 524, 2181
XspI CTAG 9 cut(s) 389, 414, 951, 1379, 1397, 1487, 2364, 2403, 3167
Zsp2I ATGCAT 2 cut(s) 340, 435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.