AT5G66810

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0008461
Physical Location & Seq
Forward (+)
26672873 .. 26676672
3800 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G66810.3

Sequence Viewer

Length: 2253 bp
ATGCCACGTGGCATTTATTATGTGGATTTGGATTTTCTAACTTGTTCTCCTCACGAAACAAAATTCACCCACACAAGACAAAGCGATCGTCGATCCCACCCACAATCTAAGATCGCCGGCCGATTCTCGTCGCCGACAAAAGAAGAACCGAGGAAGAGGAAAGCAACTATGGATTCCACACCTGTAAATTGGGAAGCGCTTGATGCTCTCATCATCGATTTCGTTAGCTCTGAAAACCTGGTTGAAGACGCCGCCGCCGCCGTCAATTCACCTCCATCTCCATTATCGTCTCCTTCTTCTTCTTCATCTCCTTCTATTTCCTCTTCTTCTTATCACTCCAGATTGATCATTCGCCGGATCCGAAGCTCGATTGAATCCGGTGACATTGAAACCGCCATCGATATTCTTCGCTCCCACGCTCCTTTCGTCCTCGATGATCATCGGATTCTATTTCGCCTCCAGAAACAGAAATTTATTGAGCTTTTGAGAAAAGGAACACATGAAGCTGCAATTGATTGCTTGAGGACTTGTGTTGCTCCCTGTGCTCTTGATGCCTACCCGGAAGCTTATGAGGAATTCAAGCATGTTCTTCTTGCACTCATCTATGATAAAGATGACCAAACCTCTCCAGTAGCAAACGAGTGGGCAGAGAAAAGAAGGTATGAAATGGCTGGACTGATGTCATCTGTCTTACGAGCTTCTTTGCAAGCATATGATCCAGTATTTTCTATGACACTAAGATATCTGATAAGCATACACAAAGGATTTTGCTTTCACCAAGGAATTTCTTCCGCAGTTTCTGATCTAACCCACAGATTGCTCCTGGAGGAACGTGATGCACCAGCCACGCCTATTGAAAGCATGTATGAAGTACCACCGTTTGATGAGGTGGATATACAGGCTCTTGCTCATGCGGTTGAGCTCACTAGACAAGGTGCTGTTGATAGTATGAAATTTGCCAAAGGTGACCTTTTCCAGGCATTCCAGAATGAATTGTGCAGGATGCGATTAGATGTTTCTGTTCTTGATGAACTTGTTAAGGAGTACTGCATATACAGGGGTATTGTGGATTCAGAGATGCAAATGATCACGATTCCTGCCAAACGCAACCAATCGGAGGTGGGCCGCAGCTTATCAAGAGATTGTTCTTCGGAAATAGATCTCAACACAAGTCAACATTCAGATATTGAGAATTATAGCAACAAGAGCATGCTCGATGGCTCACTCACATATGACACTGAAATGTCTTGCGAAGAAGGAGGTGACGTTGGCACACGTTATGGCAGTGAACCAACCAGTGTTTGTGAAGATTGCAGCACTAGCTGGTCAAATCAATGTGAAAATACAAGAGCTCTTCTTAGAATTAGATCCCATATGAATAGTGAGGGGAATAAACGCAAAAGATGGTGTGGGCGTACTGCTGAAATGGATTGTCTTCCTCGTATTTCATTTGCCAATTCCGAGTCAGGCACAAACCCTATAGAGGACAAGTATGAGATAGCGTTGGCACTGAAGGAATTGGTTAGCAGAGGAATGGCAGCAGAAGCATTTTCCGAAATCAGCACCATGGATCCAGATTTTTTCACACAAAATCCGGGTTTACTTTTCCACCTTAAGCAGGTCGAATTTCTGAAGCTGGTGAGTGCTGGTGATCACAATGGAGCCCTAAAGGTCGCATGCTTTCACTTAGGTCCCTTAGCCGCCAATGACCAGTCTTTACTGAAGACATTGAAGGAGACTTTGTTAGTTTTACTCCAACCCGACGGAACCGCACCTGGGAAAGATTTGCCTTTGAATGATCTGGCAAATACGCTACAGGTTTCTGTCGGTAATAGGCTCGGGATCGAAGAACCGAAGTTAATGAAAATAATCAAAGCGACGCTTCACACGCATACCGAGTGGTTTAAGCTTCAGATGTGTAAAGACCGGTTCAATAATCTCCTGAAGATAGATTCTTTGAAAGAAGTGAACACCGATTTGATTGGTGCTATTAAATCAAAATCAAAGAAAGATAGCAACACAAACTTGTCTTCTCAAGTCACGACGACGTCTTCAAGCACCATGACATCAGAAGATGGTGGAAGCAGCAGCTTGATGATGATGACTCAGACTTTGCCAAGAGAAGCTTTGTGGGAAGAAAGTGCAATTCTTAAAGTAATGGAATTTCTGGCGATGCCGAGGTCTGATGCAATTCAACTGCTATCACAATACAATGGAGACGCTGAGGCTGTGATTCAGCAACTCTTTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLTH

Protein Analysis

750

Amino Acids

83.7

Weight (kDa)

5.39

Isoelectric Point (pI)

53.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTLH PF10607 118 - 231 9.1e-13 CTLH/CRA C-terminal to LisH motif domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2051
Acc36I ACCTGC 1 cut(s) 1609
AciI CCGC 9 cut(s) 252, 255, 258, 393, 792, 914, 1126, 1701, 1770
AclWI GGATC 8 cut(s) 87, 352, 365, 710, 1362, 1565, 1578, 1850
AcoI YGGCCR 1 cut(s) 118
AcsI RAATTY 7 cut(s) 62, 470, 575, 783, 953, 1625, 2162
AcuI CTGAAG 5 cut(s) 1532, 1652, 1742, 1895, 1964
AcvI CACGTG 1 cut(s) 8
AcyI GRCGYC 2 cut(s) 249, 2048
AfaI GTAC 3 cut(s) 873, 1046, 1417
AfeI AGCGCT 1 cut(s) 198
AfiI CCNNNNNNNGG 5 cut(s) 976, 1117, 1483, 1618, 1776
AflII CTTAAG 1 cut(s) 1613
AflIII ACRYGT 1 cut(s) 1274
AgeI ACCGGT 1 cut(s) 1926
AjnI CCWGG 4 cut(s) 237, 822, 975, 1774
Alw21I GWGCWC 3 cut(s) 547, 924, 1354
Alw26I GTCTC 3 cut(s) 294, 1730, 2211
AlwI GGATC 8 cut(s) 87, 352, 365, 710, 1362, 1565, 1578, 1850
AlwNI CAGNNNCTG 1 cut(s) 800
Ama87I CYCGRG 1 cut(s) 1838
Aor51HI AGCGCT 1 cut(s) 198
AoxI GGCC 2 cut(s) 118, 1123
ApeKI GCWGC 6 cut(s) 506, 1128, 1314, 1538, 2085, 2088
ApoI RAATTY 7 cut(s) 62, 470, 575, 783, 953, 1625, 2162
ArsI GACNNNNNNTTYG 4 cut(s) 73, 105, 2095, 2127
AsiGI ACCGGT 1 cut(s) 1926
Asp700I GAANNNNTTC 1 cut(s) 787
AspLEI GCGC 1 cut(s) 199
AspS9I GGNCC 2 cut(s) 1123, 1691
AsuC2I CCSGG 2 cut(s) 560, 1596
AsuHPI GGTGA 8 cut(s) 58, 261, 392, 767, 977, 1274, 1651, 1661
AvaI CYCGRG 1 cut(s) 1838
AvaII GGWCC 1 cut(s) 1691
BamHI GGATCC 2 cut(s) 357, 1570
BanII GRGCYC 3 cut(s) 924, 1354, 1666
BbrPI CACGTG 1 cut(s) 8
BbsI GAAGAC 5 cut(s) 252, 1427, 1730, 2022, 2043
Bbv12I GWGCWC 3 cut(s) 547, 924, 1354
BbvCI CCTCAGC 1 cut(s) 2223
BbvI GCAGC 6 cut(s) 493, 1140, 1326, 1550, 2097, 2100
BccI CCATC 5 cut(s) 283, 404, 1211, 1398, 2069
BceAI ACGGC 1 cut(s) 245
BciT130I CCWGG 4 cut(s) 239, 824, 977, 1776
BclI TGATCA 4 cut(s) 345, 436, 1086, 1651
BcnI CCSGG 2 cut(s) 560, 1596
BcoDI GTCTC 3 cut(s) 294, 1730, 2211
BfaI CTAG 2 cut(s) 927, 1320
BfmI CTRYAG 2 cut(s) 1479, 1814
BfoI RGCGCY 1 cut(s) 200
BfrI CTTAAG 1 cut(s) 1613
BfuAI ACCTGC 1 cut(s) 1609
BglII AGATCT 1 cut(s) 1159
BmcAI AGTACT 1 cut(s) 1046
Bme1390I CCNGG 6 cut(s) 239, 560, 824, 977, 1596, 1776
Bme18I GGWCC 1 cut(s) 1691
BmeT110I CYCGRG 1 cut(s) 1838
BmgT120I GGNCC 2 cut(s) 1123, 1691
BmiI GGNNCC 5 cut(s) 359, 1572, 1663, 1693, 1768
BmrFI CCNGG 6 cut(s) 239, 560, 824, 977, 1596, 1776
BmsI GCATC 7 cut(s) 193, 541, 826, 993, 1068, 2163, 2176
BoxI GACNNNNGTC 1 cut(s) 679
BpiI GAAGAC 5 cut(s) 252, 1427, 1730, 2022, 2043
BpmI CTGGAG 4 cut(s) 322, 443, 612, 845
Bpu10I CCTNAGC 2 cut(s) 1696, 2223
BpuEI CTTGAG 2 cut(s) 541, 2019
BpuMI CCSGG 2 cut(s) 560, 1596
Bsa29I ATCGAT 2 cut(s) 216, 399
BsaAI YACGTR 1 cut(s) 8
BsaBI GATNNNNATC 1 cut(s) 438
BsaHI GRCGYC 2 cut(s) 249, 2048
BsaJI CCNNGG 5 cut(s) 149, 778, 1566, 1775, 2177
BsaWI WCCGGW 2 cut(s) 377, 1926
BsaXI ACNNNNNCTCC 6 cut(s) 31, 61, 1251, 1281, 1727, 1757
Bsc4I CCNNNNNNNGG 5 cut(s) 976, 1117, 1483, 1618, 1776
Bse118I RCCGGY 2 cut(s) 116, 1926
Bse1I ACTGG 4 cut(s) 629, 719, 1296, 1711
Bse8I GATNNNNATC 1 cut(s) 438
BseBI CCWGG 4 cut(s) 239, 824, 977, 1776
BseCI ATCGAT 2 cut(s) 216, 399
BseDI CCNNGG 5 cut(s) 149, 778, 1566, 1775, 2177
BseGI GGATG 1 cut(s) 1008
BseJI GATNNNNATC 1 cut(s) 438
BseLI CCNNNNNNNGG 5 cut(s) 976, 1117, 1483, 1618, 1776
BseMII CTCAG 2 cut(s) 2120, 2214
BseNI ACTGG 4 cut(s) 629, 719, 1296, 1711
BseRI GAGGAG 1 cut(s) 39
BseX3I CGGCCG 1 cut(s) 118
BseXI GCAGC 6 cut(s) 493, 1140, 1326, 1550, 2097, 2100
BsgI GTGCAG 1 cut(s) 1018
Bsh1285I CGRYCG 2 cut(s) 88, 121
BshFI GGCC 2 cut(s) 120, 1125
BshTI ACCGGT 1 cut(s) 1926
BshVI ATCGAT 2 cut(s) 216, 399
BsiEI CGRYCG 2 cut(s) 88, 121
BsiHKAI GWGCWC 3 cut(s) 547, 924, 1354
BsiHKCI CYCGRG 1 cut(s) 1838
BsiSI CCGG 6 cut(s) 117, 355, 378, 560, 1595, 1927
BslFI GGGAC 1 cut(s) 1677
BslI CCNNNNNNNGG 5 cut(s) 976, 1117, 1483, 1618, 1776
BsmAI GTCTC 3 cut(s) 294, 1730, 2211
BsmBI CGTCTC 2 cut(s) 294, 2211
BsmFI GGGAC 1 cut(s) 1677
BsmI GAATGC 1 cut(s) 980
BsnI GGCC 2 cut(s) 120, 1125
BsoBI CYCGRG 1 cut(s) 1838
Bsp1286I GDGCHC 4 cut(s) 547, 924, 1354, 1666
Bsp19I CCATGG 1 cut(s) 1566
BspACI CCGC 9 cut(s) 252, 255, 258, 393, 792, 914, 1126, 1701, 1770
BspANI GGCC 2 cut(s) 120, 1125
BspCNI CTCAG 2 cut(s) 2119, 2215
BspDI ATCGAT 2 cut(s) 216, 399
BspLI GGNNCC 5 cut(s) 359, 1572, 1663, 1693, 1768
BspMI ACCTGC 1 cut(s) 1609
BspPI GGATC 8 cut(s) 87, 352, 365, 710, 1362, 1565, 1578, 1850
BspQI GCTCTTC 1 cut(s) 1359
BspTI CTTAAG 1 cut(s) 1613
BsrFI RCCGGY 2 cut(s) 116, 1926
BsrI ACTGG 4 cut(s) 629, 719, 1296, 1711
BssAI RCCGGY 2 cut(s) 116, 1926
BssECI CCNNGG 5 cut(s) 149, 778, 1566, 1775, 2177
BssNI GRCGYC 2 cut(s) 249, 2048
BssT1I CCWWGG 2 cut(s) 778, 1566
Bst2UI CCWGG 4 cut(s) 239, 824, 977, 1776
Bst4CI ACNGT 1 cut(s) 879
Bst6I CTCTTC 3 cut(s) 149, 328, 1359
BstACI GRCGYC 2 cut(s) 249, 2048
BstAFI CTTAAG 1 cut(s) 1613
BstBAI YACGTR 1 cut(s) 8
BstC8I GCNNGC 4 cut(s) 118, 708, 1211, 1678
BstDEI CTNAG 7 cut(s) 108, 737, 1358, 1687, 1696, 2106, 2223
BstDSI CCRYGG 1 cut(s) 1566
BstEII GGTNACC 1 cut(s) 965
BstENI CCTNNNNNAGG 2 cut(s) 974, 1616
BstF5I GGATG 1 cut(s) 1008
BstH2I RGCGCY 1 cut(s) 200
BstHHI GCGC 1 cut(s) 199
BstMAI GTCTC 3 cut(s) 294, 1730, 2211
BstMCI CGRYCG 2 cut(s) 88, 121
BstMWI GCNNNNNNNGC 8 cut(s) 203, 257, 542, 551, 1206, 1320, 1544, 1888
BstNI CCWGG 4 cut(s) 239, 824, 977, 1776
BstNSI RCATGY 4 cut(s) 587, 865, 1213, 1680
BstPAI GACNNNNGTC 1 cut(s) 679
BstPI GGTNACC 1 cut(s) 965
BstSCI CCNGG 6 cut(s) 237, 558, 822, 975, 1594, 1774
BstSFI CTRYAG 2 cut(s) 1479, 1814
BstV1I GCAGC 6 cut(s) 493, 1140, 1326, 1550, 2097, 2100
BstV2I GAAGAC 5 cut(s) 252, 1427, 1730, 2022, 2043
BstX2I RGATCY 4 cut(s) 357, 1159, 1367, 1570
BstYI RGATCY 4 cut(s) 357, 1159, 1367, 1570
BstZI CGGCCG 1 cut(s) 118
Bsu15I ATCGAT 2 cut(s) 216, 399
BsuRI GGCC 2 cut(s) 120, 1125
BsuTUI ATCGAT 2 cut(s) 216, 399
BtgI CCRYGG 1 cut(s) 1566
BtgZI GCGATG 1 cut(s) 2186
BtsCI GGATG 1 cut(s) 1008
BtsI GCAGTG 1 cut(s) 1291
BtsIMutI CAGTG 4 cut(s) 1236, 1291, 1303, 1508
BveI ACCTGC 1 cut(s) 1609
Cac8I GCNNGC 4 cut(s) 118, 708, 1211, 1678
CaiI CAGNNNCTG 1 cut(s) 800
CfoI GCGC 1 cut(s) 199
Cfr10I RCCGGY 2 cut(s) 116, 1926
Cfr13I GGNCC 2 cut(s) 1123, 1691
ClaI ATCGAT 2 cut(s) 216, 399
CseI GACGC 3 cut(s) 257, 1888, 2228
CsiI ACCWGGT 1 cut(s) 237
Csp6I GTAC 3 cut(s) 872, 1045, 1416
CspAI ACCGGT 1 cut(s) 1926
CspCI CAANNNNNGTGG 2 cut(s) 835, 870
CviAII CATG 8 cut(s) 500, 584, 862, 911, 1210, 1567, 1677, 2062
CviQI GTAC 3 cut(s) 872, 1045, 1416
DdeI CTNAG 7 cut(s) 108, 737, 1358, 1687, 1696, 2106, 2223
EaeI YGGCCR 1 cut(s) 118
EagI CGGCCG 1 cut(s) 118
Eam1104I CTCTTC 3 cut(s) 149, 328, 1359
EarI CTCTTC 3 cut(s) 149, 328, 1359
Ecl136II GAGCTC 2 cut(s) 922, 1352
EclXI CGGCCG 1 cut(s) 118
Eco130I CCWWGG 2 cut(s) 778, 1566
Eco24I GRGCYC 3 cut(s) 924, 1354, 1666
Eco32I GATATC 1 cut(s) 743
Eco47I GGWCC 1 cut(s) 1691
Eco47III AGCGCT 1 cut(s) 198
Eco52I CGGCCG 1 cut(s) 118
Eco53kI GAGCTC 2 cut(s) 922, 1352
Eco57I CTGAAG 5 cut(s) 1532, 1652, 1742, 1895, 1964
Eco72I CACGTG 1 cut(s) 8
Eco88I CYCGRG 1 cut(s) 1838
Eco91I GGTNACC 1 cut(s) 965
EcoICRI GAGCTC 2 cut(s) 922, 1352
EcoNI CCTNNNNNAGG 2 cut(s) 974, 1616
EcoO109I RGGNCCY 1 cut(s) 1691
EcoO65I GGTNACC 1 cut(s) 965
EcoRI GAATTC 1 cut(s) 575
EcoRII CCWGG 4 cut(s) 237, 822, 975, 1774
EcoRV GATATC 1 cut(s) 743
EcoT14I CCWWGG 2 cut(s) 778, 1566
EcoT38I GRGCYC 3 cut(s) 924, 1354, 1666
ErhI CCWWGG 2 cut(s) 778, 1566
Esp3I CGTCTC 2 cut(s) 294, 2211
FaeI CATG 8 cut(s) 503, 587, 865, 914, 1213, 1570, 1680, 2065
FalI AAGNNNNNCTT 6 cut(s) 954, 986, 1866, 1898, 2110, 2142
FaqI GGGAC 1 cut(s) 1677
FatI CATG 8 cut(s) 499, 583, 861, 910, 1209, 1566, 1676, 2061
FauNDI CATATG 3 cut(s) 712, 1231, 1374
FbaI TGATCA 4 cut(s) 345, 436, 1086, 1651
FokI GGATG 1 cut(s) 1015
FriOI GRGCYC 3 cut(s) 924, 1354, 1666
FspBI CTAG 2 cut(s) 927, 1320
GlaI GCGC 1 cut(s) 198
GsuI CTGGAG 4 cut(s) 322, 443, 612, 845
HaeII RGCGCY 1 cut(s) 200
HaeIII GGCC 2 cut(s) 120, 1125
HapII CCGG 6 cut(s) 117, 355, 378, 560, 1595, 1927
HgaI GACGC 3 cut(s) 257, 1888, 2228
HhaI GCGC 1 cut(s) 199
Hin1I GRCGYC 2 cut(s) 249, 2048
Hin1II CATG 8 cut(s) 503, 587, 865, 914, 1213, 1570, 1680, 2065
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HincII GTYRAC 1 cut(s) 1175
HindII GTYRAC 1 cut(s) 1175
HindIII AAGCTT 3 cut(s) 564, 1907, 2124
HpaII CCGG 6 cut(s) 117, 355, 378, 560, 1595, 1927
HphI GGTGA 8 cut(s) 58, 261, 392, 767, 977, 1274, 1651, 1661
Hpy166II GTNNAC 4 cut(s) 1175, 1289, 1601, 1969
Hpy8I GTNNAC 4 cut(s) 1175, 1289, 1601, 1969
Hpy99I CGWCG 6 cut(s) 93, 133, 1766, 1882, 2047, 2050
HpyAV CCTTC 6 cut(s) 303, 321, 651, 1250, 1507, 1726
HpyCH4III ACNGT 1 cut(s) 879
HpyCH4IV ACGT 5 cut(s) 7, 832, 1266, 1276, 2048
HpyF10VI GCNNNNNNNGC 8 cut(s) 203, 257, 542, 551, 1206, 1320, 1544, 1888
HpyF3I CTNAG 7 cut(s) 108, 737, 1358, 1687, 1696, 2106, 2223
HpySE526I ACGT 5 cut(s) 7, 832, 1266, 1276, 2048
Hsp92I GRCGYC 2 cut(s) 249, 2048
Hsp92II CATG 8 cut(s) 503, 587, 865, 914, 1213, 1570, 1680, 2065
HspAI GCGC 1 cut(s) 197
KroI GCCGGC 1 cut(s) 116
KroNI GCCGGC 1 cut(s) 118
Ksp22I TGATCA 4 cut(s) 345, 436, 1086, 1651
LguI GCTCTTC 1 cut(s) 1359
LmnI GCTCC 5 cut(s) 416, 424, 541, 825, 1661
Lsp1109I GCAGC 6 cut(s) 493, 1140, 1326, 1550, 2097, 2100
LweI GCATC 7 cut(s) 193, 541, 826, 993, 1068, 2163, 2176
MabI ACCWGGT 1 cut(s) 237
MaeI CTAG 2 cut(s) 927, 1320
MaeII ACGT 5 cut(s) 7, 832, 1266, 1276, 2048
MaeIII GTNAC 4 cut(s) 380, 965, 1262, 2038
MfeI CAATTG 1 cut(s) 510
MflI RGATCY 4 cut(s) 357, 1159, 1367, 1570
MhlI GDGCHC 4 cut(s) 547, 924, 1354, 1666
MlyI GAGTC 2 cut(s) 1472, 2098
MmeI TCCRAC 1 cut(s) 1780
MroNI GCCGGC 1 cut(s) 116
MroXI GAANNNNTTC 1 cut(s) 787
MseI TTAA 6 cut(s) 1038, 1614, 1859, 1905, 1992, 2151
MslI CAYNNNNRTG 1 cut(s) 1241
MspCI CTTAAG 1 cut(s) 1613
MspI CCGG 6 cut(s) 117, 355, 378, 560, 1595, 1927
MspR9I CCNGG 6 cut(s) 239, 560, 824, 977, 1596, 1776
MunI CAATTG 1 cut(s) 510
Mva1269I GAATGC 1 cut(s) 980
MvaI CCWGG 4 cut(s) 239, 824, 977, 1776
MwoI GCNNNNNNNGC 8 cut(s) 203, 257, 542, 551, 1206, 1320, 1544, 1888
NaeI GCCGGC 1 cut(s) 118
NciI CCSGG 2 cut(s) 560, 1596
NcoI CCATGG 1 cut(s) 1566
NdeI CATATG 3 cut(s) 712, 1231, 1374
NgoMIV GCCGGC 1 cut(s) 116
NlaIII CATG 8 cut(s) 503, 587, 865, 914, 1213, 1570, 1680, 2065
NlaIV GGNNCC 5 cut(s) 359, 1572, 1663, 1693, 1768
NmeAIII GCCGAG 1 cut(s) 2202
NmuCI GTSAC 4 cut(s) 380, 965, 1262, 2038
NspI RCATGY 4 cut(s) 587, 865, 1213, 1680
PaeI GCATGC 2 cut(s) 1213, 1680
PciSI GCTCTTC 1 cut(s) 1359
PcsI WCGNNNNNNNCGW 2 cut(s) 358, 423
PctI GAATGC 1 cut(s) 980
PdiI GCCGGC 1 cut(s) 118
PdmI GAANNNNTTC 1 cut(s) 787
PfeI GAWTC 8 cut(s) 123, 173, 374, 445, 1070, 1093, 1952, 2233
PflFI GACNNNGTC 1 cut(s) 2047
PfoI TCCNGGA 1 cut(s) 822
PinAI ACCGGT 1 cut(s) 1926
Ple19I CGATCG 1 cut(s) 88
PleI GAGTC 2 cut(s) 1471, 2098
PmaCI CACGTG 1 cut(s) 8
PmlI CACGTG 1 cut(s) 8
PpsI GAGTC 2 cut(s) 1471, 2098
Ppu21I YACGTR 1 cut(s) 8
PpuMI RGGWCCY 1 cut(s) 1691
PshAI GACNNNNGTC 1 cut(s) 679
Psp124BI GAGCTC 2 cut(s) 924, 1354
Psp5II RGGWCCY 1 cut(s) 1691
Psp6I CCWGG 4 cut(s) 237, 822, 975, 1774
PspCI CACGTG 1 cut(s) 8
PspEI GGTNACC 1 cut(s) 965
PspGI CCWGG 4 cut(s) 237, 822, 975, 1774
PspN4I GGNNCC 5 cut(s) 359, 1572, 1663, 1693, 1768
PspPI GGNCC 2 cut(s) 1123, 1691
PspPPI RGGWCCY 1 cut(s) 1691
PstNI CAGNNNCTG 1 cut(s) 800
PsuI RGATCY 4 cut(s) 357, 1159, 1367, 1570
PsyI GACNNNGTC 1 cut(s) 2047
PvuI CGATCG 1 cut(s) 88
RsaI GTAC 3 cut(s) 873, 1046, 1417
RsaNI GTAC 3 cut(s) 872, 1045, 1416
RseI CAYNNNNRTG 1 cut(s) 1241
SacI GAGCTC 2 cut(s) 924, 1354
SapI GCTCTTC 1 cut(s) 1359
SaqAI TTAA 6 cut(s) 1038, 1614, 1859, 1905, 1992, 2151
Sau96I GGNCC 2 cut(s) 1123, 1691
ScaI AGTACT 1 cut(s) 1046
SchI GAGTC 2 cut(s) 1472, 2098
ScrFI CCNGG 6 cut(s) 239, 560, 824, 977, 1596, 1776
SduI GDGCHC 4 cut(s) 547, 924, 1354, 1666
SexAI ACCWGGT 1 cut(s) 237
SfaNI GCATC 7 cut(s) 193, 541, 826, 993, 1068, 2163, 2176
SfcI CTRYAG 2 cut(s) 1479, 1814
SinI GGWCC 1 cut(s) 1691
SmiMI CAYNNNNRTG 1 cut(s) 1241
SmlI CTYRAG 3 cut(s) 520, 1613, 2034
SmoI CTYRAG 3 cut(s) 520, 1613, 2034
SphI GCATGC 2 cut(s) 1213, 1680
SsiI CCGC 9 cut(s) 252, 255, 258, 393, 792, 914, 1126, 1701, 1770
SspMI CTAG 2 cut(s) 927, 1320
SstI GAGCTC 2 cut(s) 924, 1354
StyD4I CCNGG 6 cut(s) 237, 558, 822, 975, 1594, 1774
StyI CCWWGG 2 cut(s) 778, 1566
TaaI ACNGT 1 cut(s) 879
TaiI ACGT 5 cut(s) 10, 835, 1269, 1279, 2051
TaqI TCGA 8 cut(s) 91, 216, 368, 399, 432, 1215, 1623, 1845
TatI WGTACW 1 cut(s) 1044
TauI GCSGC 5 cut(s) 254, 257, 260, 1128, 1703
TfiI GAWTC 8 cut(s) 123, 173, 374, 445, 1070, 1093, 1952, 2233
Tru1I TTAA 6 cut(s) 1038, 1614, 1859, 1905, 1992, 2151
Tru9I TTAA 6 cut(s) 1038, 1614, 1859, 1905, 1992, 2151
TscAI CASTG 4 cut(s) 1243, 1291, 1303, 1515
TseFI GTSAC 4 cut(s) 380, 965, 1262, 2038
TseI GCWGC 6 cut(s) 506, 1128, 1314, 1538, 2085, 2088
Tsp45I GTSAC 4 cut(s) 380, 965, 1262, 2038
TspGWI ACGGA 1 cut(s) 1779
TspRI CASTG 4 cut(s) 1243, 1291, 1303, 1515
Tth111I GACNNNGTC 1 cut(s) 2047
Vha464I CTTAAG 1 cut(s) 1613
VpaK11BI GGWCC 1 cut(s) 1691
XagI CCTNNNNNAGG 2 cut(s) 974, 1616
XapI RAATTY 7 cut(s) 62, 470, 575, 783, 953, 1625, 2162
XceI RCATGY 4 cut(s) 587, 865, 1213, 1680
XmnI GAANNNNTTC 1 cut(s) 787
XspI CTAG 2 cut(s) 927, 1320
ZraI GACGTC 1 cut(s) 2049
ZrmI AGTACT 1 cut(s) 1046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.