RchiOBHm_Chr2g0105071

CTLH/CRA C-terminal to LisH motif domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0008461
Physical Location & Seq
Reverse (-)
16425272 .. 16429788
4517 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47931

Sequence Viewer

Length: 2157 bp
ATGGACTCAATGCCTATTAACTGGGAAGCCCTCGACGCTCTCATAATCGATTTCGCCAAATCCGAGAACCTAATCGAAGACTCCTTCTCGTCTCCGCCGTCGTCTCCGTCGCCGTCATCTTCCTCGTCGTCGTCCGTTTCGTCGTCGTCGTATCACTCGCGGCTGATTATCCGTCAGATCAGACGGTCGTTGGAGGCCGGTGACATTGACGCCGCCGTCGATCTCCTCCGCTCCCACGCGCCCTTCATCCTCGACGATCATCGCCTCCTCTTCCGCCTCCAGAAACAGAGGTTTATTGAGCTGTTGAGGAGAGGCTCGGCGGAGGCGCGTGAGTCGGCGATTAGTTGCCTGAGAACTGCTCTGGCTCCTTGTGCGCTTGACGCCTATCCGGAAGCATATGAGGAGTTCAAGCATGTACTACTAGCTTTTATATATGATAAAGACGATCAAGCTTCTCCAGTAGCAAGTGAGTGGTCCGAAAGGAGGAGGTTTGAAATTGCTGGATTGGTTTCCACTGTCTTAAGAGCCCATTTACATGCCTATGATCCTGTTTTCTCAATGACCTTGATATATTTAATAAGCATACACAAGGGCTTTTGTCTTCGTCAAGGAATTTCATCACCCATTTCAGACCTTACGACGAGGTTGCTTCTAGAGGAGCGTGACCCCCCAGCAATTCCCCAAGAGAGCCTGTCTGAAGCACCTCCTTTTGATGAGGTGGACATACAAGCTCTAGCACACGCTGTAGAACTTACAAGGCAGGGAGCAGTAGATAGTTTGAGATTTGCTAAGGGTGATTTGTTTCAGGCTTTTCAGAACGAAATATGTAGAATGAGAGTTGATGTGACCCTGCTTGATGAGCTTGTTCGCGAGTACTGTGTTTATAGGGGCATTGTGGATGCTGGTCTTGCATCTTCTTCTGTTGTACCCGGAATGCAAAGCCCTTCCAAATCTATGAAAGTTGACCAATCAGTGGCTGGTTATTCTTTGTCAAGAGACAGTTCTCACGAGGTGGAATATGCCAGCAAAAATTCTGATGGTGAAGTTTCCATTAGTACTGATCAGCGACGTGGTTCCCCTGAAAAGAATTCTGATGTGGCTAGCATGGAAGGAATCGAGGTCGACCTACGTTATGCTTGTGAGTCAACCAGCAACCAAGAAGATTGTAGCACCAGTGGATCACATCAGCCTGAAAATCTTAGAGTTCCACAAAGAAACAGAACCAATGTAAGTGCAGAAAGAAGCAAGCGCAAGCGATGGAGGGGAAGACAAGATGATCTTGGGTTTATTCCTGTTGTTTCTTGTAATCAAATAAGTAAAGGAATAAGCTCAAATTCCCTGGTTTCTGATACATTGTCTTCAAAGGAGAAGCAGGCTTCAGAATGTTTAGTTGTAGATGTTAACAACGTGGATAAATATGAGATTGTGCTTGAGATGAAGGAACTAGCTAGCAAAGGAATGGCTGCAGAGGTTGTAGAAGGAGTCAACTCGATGGACCCGAACTTTTTTGGGCAAAATCCTCTTTTGCTGTTTCAACTTAAGCAGGTTGAATTCCTTAAGCTTGTCAGCTCTGGTGACTGTTCTAGTGCTCTGAGGGTTGCATGCTCTCATCTTGGTCCTTTGGCTGCTAGTAACCCATCTTTACTGAAATCCTTGAAGGAGACTTTATTAGCACTGCTCCAACCTGATGAAGACGCACTTCGAAAAGGCTTCCCCTTGCATGCTCTTGCAACTTCACTCCAGGTTGCAATTGGGAGGAGGCTTGGCATTGATGAACCACAGCTTATGAAAATAATGAGAGCAACCCTTCACACACATAATGAGTGGTTTAAACTTCAAATGTGTAAGGATCACTTTGAAAGTCTATTGAGGATTGATTTCTTGAAAGAAGTTAATATGCCTTCGCTTGCTGCTGCTGCAACATCAAAGTCAAATGCTGATAGTTGCTCTAATGGGTCTTCCCAAGTTACAATATCTTCAAGCACCAGGATGGTGGAAGATGGAAGCAGCCTGTCTCAAGTGTCATCGAGAGATGTTGACGAGAATGCAGTACTGAAAGTAATGGAATTTCTAGCTCTGCCGAGAGCAGATGCCATCCATCTTCTTGGACAGTACAATGGAAATGCTGAGACGGTCATTCAGCAAATATTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLTH

Protein Analysis

718

Amino Acids

79.17

Weight (kDa)

5.3

Isoelectric Point (pI)

53.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTLH PF10607 58 - 172 1.5e-11 CTLH/CRA C-terminal to LisH motif domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 215
Acc36I ACCTGC 1 cut(s) 1534
AccB7I CCANNNNNTGG 1 cut(s) 973
AccBSI CCGCTC 1 cut(s) 231
AccI GTMKAC 1 cut(s) 1122
AccII CGCG 4 cut(s) 160, 239, 328, 870
AccIII TCCGGA 1 cut(s) 388
AciI CCGC 6 cut(s) 95, 160, 213, 229, 274, 320
AclWI GGATC 3 cut(s) 539, 1186, 1857
AcsI RAATTY 6 cut(s) 612, 1030, 1087, 1333, 1550, 2066
AcuI CTGAAG 2 cut(s) 717, 1362
AcyI GRCGYC 2 cut(s) 210, 381
AdeI CACNNNGTG 1 cut(s) 1012
AfaI GTAC 6 cut(s) 417, 875, 927, 1057, 2052, 2114
AfiI CCNNNNNNNGG 2 cut(s) 483, 973
AflII CTTAAG 3 cut(s) 520, 1538, 1556
AjiI CACGTC 1 cut(s) 1070
AjnI CCWGG 3 cut(s) 1338, 1740, 1985
Alw21I GWGCWC 1 cut(s) 1591
Alw26I GTCTC 6 cut(s) 96, 108, 990, 1655, 2019, 2123
AlwI GGATC 3 cut(s) 539, 1186, 1857
AlwNI CAGNNNCTG 1 cut(s) 977
Aor13HI TCCGGA 1 cut(s) 388
AoxI GGCC 1 cut(s) 195
ApeKI GCWGC 6 cut(s) 1463, 1625, 1910, 1913, 1916, 2007
ApoI RAATTY 6 cut(s) 612, 1030, 1087, 1333, 1550, 2066
AspLEI GCGC 4 cut(s) 241, 328, 376, 1251
AspS9I GGNCC 3 cut(s) 474, 1495, 1616
AsuC2I CCSGG 1 cut(s) 930
AsuHPI GGTGA 5 cut(s) 212, 612, 806, 1052, 1586
AsuII TTCGAA 1 cut(s) 1702
AsuNHI GCTAGC 2 cut(s) 1100, 1448
AvaII GGWCC 3 cut(s) 474, 1495, 1616
BanII GRGCYC 1 cut(s) 529
BauI CACGAG 1 cut(s) 1007
BbsI GAAGAC 6 cut(s) 84, 593, 1273, 1350, 1698, 1950
Bbv12I GWGCWC 1 cut(s) 1591
BbvI GCAGC 6 cut(s) 1450, 1612, 1897, 1900, 1903, 2019
BccI CCATC 8 cut(s) 1031, 1251, 1486, 1645, 1984, 1994, 2102, 2106
BceAI ACGGC 3 cut(s) 82, 97, 200
BcgI CGANNNNNNTGC 2 cut(s) 628, 662
BciT130I CCWGG 3 cut(s) 1340, 1742, 1987
BclI TGATCA 1 cut(s) 1060
BcnI CCSGG 1 cut(s) 930
BcoDI GTCTC 6 cut(s) 96, 108, 990, 1655, 2019, 2123
BfaI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
BfmI CTRYAG 2 cut(s) 744, 1464
BfrI CTTAAG 3 cut(s) 520, 1538, 1556
BfuAI ACCTGC 1 cut(s) 1534
BisI GCNGC 8 cut(s) 161, 213, 1464, 1626, 1911, 1914, 1917, 2008
BlsI GCNGC 8 cut(s) 162, 214, 1465, 1627, 1912, 1915, 1918, 2009
BmcAI AGTACT 3 cut(s) 875, 1057, 2052
Bme1390I CCNGG 4 cut(s) 930, 1340, 1742, 1987
Bme18I GGWCC 3 cut(s) 474, 1495, 1616
BmgBI CACGTC 1 cut(s) 1070
BmgT120I GGNCC 3 cut(s) 474, 1495, 1616
BmiI GGNNCC 3 cut(s) 366, 1075, 1497
BmrFI CCNGG 4 cut(s) 930, 1340, 1742, 1987
BmrI ACTGGG 1 cut(s) 31
BmsI GCATC 3 cut(s) 889, 920, 2080
BmtI GCTAGC 2 cut(s) 1104, 1452
BmuI ACTGGG 1 cut(s) 31
BpiI GAAGAC 6 cut(s) 84, 593, 1273, 1350, 1698, 1950
BplI GAGNNNNNCTC 2 cut(s) 343, 375
BpmI CTGGAG 3 cut(s) 263, 441, 1724
Bpu10I CCTNAGC 1 cut(s) 789
Bpu14I TTCGAA 1 cut(s) 1702
BpuEI CTTGAG 2 cut(s) 1451, 2001
BpuMI CCSGG 1 cut(s) 930
Bsa29I ATCGAT 1 cut(s) 48
BsaHI GRCGYC 2 cut(s) 210, 381
BsaJI CCNNGG 1 cut(s) 1338
BsaWI WCCGGW 1 cut(s) 388
Bsc4I CCNNNNNNNGG 2 cut(s) 483, 973
Bse118I RCCGGY 1 cut(s) 197
Bse1I ACTGG 3 cut(s) 26, 458, 1173
BseAI TCCGGA 1 cut(s) 388
BseBI CCWGG 3 cut(s) 1340, 1742, 1987
BseCI ATCGAT 1 cut(s) 48
BseDI CCNNGG 1 cut(s) 1338
BseGI GGATG 4 cut(s) 246, 904, 1995, 2094
BseLI CCNNNNNNNGG 2 cut(s) 483, 973
BseMII CTCAG 3 cut(s) 341, 1583, 2118
BseNI ACTGG 3 cut(s) 26, 458, 1173
BseRI GAGGAG 7 cut(s) 215, 257, 322, 416, 499, 671, 1771
BseXI GCAGC 6 cut(s) 1450, 1612, 1897, 1900, 1903, 2019
BseYI CCCAGC 1 cut(s) 670
BsgI GTGCAG 1 cut(s) 1254
Bsh1236I CGCG 4 cut(s) 160, 239, 328, 870
Bsh1285I CGRYCG 1 cut(s) 188
BshFI GGCC 1 cut(s) 197
BshVI ATCGAT 1 cut(s) 48
BsiEI CGRYCG 1 cut(s) 188
BsiHKAI GWGCWC 1 cut(s) 1591
BsiSI CCGG 3 cut(s) 198, 389, 930
BslI CCNNNNNNNGG 2 cut(s) 483, 973
BsmAI GTCTC 6 cut(s) 96, 108, 990, 1655, 2019, 2123
BsmBI CGTCTC 3 cut(s) 96, 108, 2123
BsmI GAATGC 2 cut(s) 939, 2050
BsnI GGCC 1 cut(s) 197
Bsp119I TTCGAA 1 cut(s) 1702
Bsp1286I GDGCHC 2 cut(s) 529, 1591
Bsp13I TCCGGA 1 cut(s) 388
Bsp143I GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
Bsp68I TCGCGA 1 cut(s) 870
BspACI CCGC 6 cut(s) 95, 160, 213, 229, 274, 320
BspANI GGCC 1 cut(s) 197
BspCNI CTCAG 3 cut(s) 342, 1584, 2119
BspDI ATCGAT 1 cut(s) 48
BspEI TCCGGA 1 cut(s) 388
BspFNI CGCG 4 cut(s) 160, 239, 328, 870
BspLI GGNNCC 3 cut(s) 366, 1075, 1497
BspMAI CTGCAG 1 cut(s) 1468
BspMI ACCTGC 1 cut(s) 1534
BspOI GCTAGC 2 cut(s) 1104, 1452
BspPI GGATC 3 cut(s) 539, 1186, 1857
BspT104I TTCGAA 1 cut(s) 1702
BspTI CTTAAG 3 cut(s) 520, 1538, 1556
BsrBI CCGCTC 1 cut(s) 231
BsrFI RCCGGY 1 cut(s) 197
BsrI ACTGG 3 cut(s) 26, 458, 1173
BssAI RCCGGY 1 cut(s) 197
BssECI CCNNGG 1 cut(s) 1338
BssMI GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
BssNI GRCGYC 2 cut(s) 210, 381
BssSI CACGAG 1 cut(s) 1007
Bst2BI CACGAG 1 cut(s) 1007
Bst2UI CCWGG 3 cut(s) 1340, 1742, 1987
Bst4CI ACNGT 7 cut(s) 186, 517, 878, 1001, 1580, 2112, 2134
Bst6I CTCTTC 1 cut(s) 275
BstACI GRCGYC 2 cut(s) 210, 381
BstAFI CTTAAG 3 cut(s) 520, 1538, 1556
BstBI TTCGAA 1 cut(s) 1702
BstC8I GCNNGC 9 cut(s) 1024, 1102, 1247, 1253, 1374, 1450, 1603, 1722, 1908
BstDEI CTNAG 5 cut(s) 350, 789, 1199, 1592, 2127
BstF5I GGATG 4 cut(s) 246, 904, 1995, 2094
BstFNI CGCG 4 cut(s) 160, 239, 328, 870
BstHHI GCGC 4 cut(s) 241, 328, 376, 1251
BstKTI GATC 9 cut(s) 180, 223, 259, 448, 547, 1063, 1181, 1279, 1852
BstMAI GTCTC 6 cut(s) 96, 108, 990, 1655, 2019, 2123
BstMBI GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
BstMCI CGRYCG 1 cut(s) 188
BstMWI GCNNNNNNNGC 6 cut(s) 35, 371, 380, 859, 908, 1916
BstNI CCWGG 3 cut(s) 1340, 1742, 1987
BstNSI RCATGY 4 cut(s) 416, 539, 1605, 1724
BstSCI CCNGG 4 cut(s) 928, 1338, 1740, 1985
BstSFI CTRYAG 2 cut(s) 744, 1464
BstUI CGCG 4 cut(s) 160, 239, 328, 870
BstV1I GCAGC 6 cut(s) 1450, 1612, 1897, 1900, 1903, 2019
BstV2I GAAGAC 6 cut(s) 84, 593, 1273, 1350, 1698, 1950
BstXI CCANNNNNNTGG 2 cut(s) 1993, 2105
Bsu15I ATCGAT 1 cut(s) 48
BsuRI GGCC 1 cut(s) 197
BsuTUI ATCGAT 1 cut(s) 48
BtgZI GCGATG 2 cut(s) 245, 1270
BtrI CACGTC 1 cut(s) 1070
BtsCI GGATG 4 cut(s) 246, 904, 1995, 2094
BtsI GCAGTG 1 cut(s) 1673
BtsIMutI CAGTG 4 cut(s) 513, 978, 1180, 1673
BtuMI TCGCGA 1 cut(s) 870
BveI ACCTGC 1 cut(s) 1534
Cac8I GCNNGC 9 cut(s) 1024, 1102, 1247, 1253, 1374, 1450, 1603, 1722, 1908
CaiI CAGNNNCTG 1 cut(s) 977
CfoI GCGC 4 cut(s) 241, 328, 376, 1251
Cfr10I RCCGGY 1 cut(s) 197
Cfr13I GGNCC 3 cut(s) 474, 1495, 1616
ClaI ATCGAT 1 cut(s) 48
CseI GACGC 4 cut(s) 44, 218, 389, 1703
Csp6I GTAC 6 cut(s) 416, 874, 926, 1056, 2051, 2113
CviAII CATG 5 cut(s) 413, 536, 1105, 1602, 1721
CviQI GTAC 6 cut(s) 416, 874, 926, 1056, 2051, 2113
DdeI CTNAG 5 cut(s) 350, 789, 1199, 1592, 2127
DpnI GATC 9 cut(s) 179, 222, 258, 447, 546, 1062, 1180, 1278, 1851
DpnII GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
DraI TTTAAA 1 cut(s) 1831
DraIII CACNNNGTG 1 cut(s) 1012
DrdI GACNNNNNNGTC 1 cut(s) 215
DseDI GACNNNNNNGTC 1 cut(s) 215
Eam1104I CTCTTC 1 cut(s) 275
EarI CTCTTC 1 cut(s) 275
EciI GGCGGA 3 cut(s) 84, 263, 335
Eco24I GRGCYC 1 cut(s) 529
Eco47I GGWCC 3 cut(s) 474, 1495, 1616
Eco57I CTGAAG 2 cut(s) 717, 1362
EcoRI GAATTC 2 cut(s) 1087, 1550
EcoRII CCWGG 3 cut(s) 1338, 1740, 1985
EcoT38I GRGCYC 1 cut(s) 529
Esp3I CGTCTC 3 cut(s) 96, 108, 2123
FaeI CATG 5 cut(s) 416, 539, 1108, 1605, 1724
FalI AAGNNNNNCTT 6 cut(s) 1263, 1295, 1683, 1715, 1838, 1870
FatI CATG 5 cut(s) 412, 535, 1104, 1601, 1720
FauNDI CATATG 1 cut(s) 397
FbaI TGATCA 1 cut(s) 1060
FblI GTMKAC 1 cut(s) 1122
Fnu4HI GCNGC 8 cut(s) 161, 213, 1464, 1626, 1911, 1914, 1917, 2008
FokI GGATG 4 cut(s) 233, 911, 2002, 2081
FriOI GRGCYC 1 cut(s) 529
Fsp4HI GCNGC 8 cut(s) 161, 213, 1464, 1626, 1911, 1914, 1917, 2008
FspBI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
GlaI GCGC 4 cut(s) 240, 327, 375, 1250
GluI GCNGC 8 cut(s) 161, 213, 1464, 1626, 1911, 1914, 1917, 2008
GsaI CCCAGC 1 cut(s) 674
GsuI CTGGAG 3 cut(s) 263, 441, 1724
HaeIII GGCC 1 cut(s) 197
HapII CCGG 3 cut(s) 198, 389, 930
HgaI GACGC 4 cut(s) 44, 218, 389, 1703
HhaI GCGC 4 cut(s) 241, 328, 376, 1251
Hin1I GRCGYC 2 cut(s) 210, 381
Hin1II CATG 5 cut(s) 416, 539, 1108, 1605, 1724
Hin6I GCGC 4 cut(s) 239, 326, 374, 1249
HinP1I GCGC 4 cut(s) 239, 326, 374, 1249
HincII GTYRAC 6 cut(s) 964, 1123, 1146, 1402, 1486, 2038
HindII GTYRAC 6 cut(s) 964, 1123, 1146, 1402, 1486, 2038
HindIII AAGCTT 2 cut(s) 450, 1559
HinfI GANTC 6 cut(s) 5, 80, 332, 1113, 1142, 1482
HpaI GTTAAC 1 cut(s) 1402
HpaII CCGG 3 cut(s) 198, 389, 930
HphI GGTGA 5 cut(s) 212, 612, 806, 1052, 1586
Hpy166II GTNNAC 7 cut(s) 721, 964, 1123, 1146, 1402, 1486, 2038
Hpy188III TCNNGA 8 cut(s) 280, 389, 653, 869, 993, 1007, 1882, 2028
Hpy8I GTNNAC 7 cut(s) 721, 964, 1123, 1146, 1402, 1486, 2038
HpyAV CCTTC 9 cut(s) 94, 253, 954, 1103, 1432, 1472, 1651, 1817, 1911
HpyCH4III ACNGT 7 cut(s) 186, 517, 878, 1001, 1580, 2112, 2134
HpyCH4IV ACGT 3 cut(s) 1069, 1129, 1407
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 371, 380, 859, 908, 1916
HpyF3I CTNAG 5 cut(s) 350, 789, 1199, 1592, 2127
HpySE526I ACGT 3 cut(s) 1069, 1129, 1407
Hsp92I GRCGYC 2 cut(s) 210, 381
Hsp92II CATG 5 cut(s) 416, 539, 1108, 1605, 1724
HspAI GCGC 4 cut(s) 239, 326, 374, 1249
Kpn2I TCCGGA 1 cut(s) 388
Ksp22I TGATCA 1 cut(s) 1060
KspAI GTTAAC 1 cut(s) 1402
Kzo9I GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
LmnI GCTCC 5 cut(s) 236, 370, 658, 764, 1683
Lsp1109I GCAGC 6 cut(s) 1450, 1612, 1897, 1900, 1903, 2019
LweI GCATC 3 cut(s) 889, 920, 2080
MaeI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
MaeII ACGT 3 cut(s) 1069, 1129, 1407
MaeIII GTNAC 6 cut(s) 200, 662, 844, 1574, 1631, 1966
MalI GATC 9 cut(s) 179, 222, 258, 447, 546, 1062, 1180, 1278, 1851
MbiI CCGCTC 1 cut(s) 231
MboI GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
MfeI CAATTG 1 cut(s) 1749
MhlI GDGCHC 2 cut(s) 529, 1591
MluCI AATT 9 cut(s) 495, 612, 675, 1030, 1087, 1333, 1550, 1749, 2066
MlyI GAGTC 4 cut(s) 74, 341, 1151, 1491
MmeI TCCRAC 2 cut(s) 171, 1705
MroI TCCGGA 1 cut(s) 388
MseI TTAA 9 cut(s) 18, 521, 575, 1401, 1539, 1557, 1830, 1893, 2155
MslI CAYNNNNRTG 3 cut(s) 534, 540, 1988
MspCI CTTAAG 3 cut(s) 520, 1538, 1556
MspI CCGG 3 cut(s) 198, 389, 930
MspR9I CCNGG 4 cut(s) 930, 1340, 1742, 1987
MssI GTTTAAAC 1 cut(s) 1831
MunI CAATTG 1 cut(s) 1749
Mva1269I GAATGC 2 cut(s) 939, 2050
MvaI CCWGG 3 cut(s) 1340, 1742, 1987
MvnI CGCG 4 cut(s) 160, 239, 328, 870
MwoI GCNNNNNNNGC 6 cut(s) 35, 371, 380, 859, 908, 1916
NciI CCSGG 1 cut(s) 930
NdeI CATATG 1 cut(s) 397
NdeII GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
NheI GCTAGC 2 cut(s) 1100, 1448
NlaIII CATG 5 cut(s) 416, 539, 1108, 1605, 1724
NlaIV GGNNCC 3 cut(s) 366, 1075, 1497
NmeAIII GCCGAG 2 cut(s) 296, 2106
NmuCI GTSAC 4 cut(s) 200, 662, 844, 1574
NruI TCGCGA 1 cut(s) 870
NspI RCATGY 4 cut(s) 416, 539, 1605, 1724
NspV TTCGAA 1 cut(s) 1702
PaeI GCATGC 2 cut(s) 1605, 1724
PcsI WCGNNNNNNNCGW 6 cut(s) 60, 95, 137, 146, 216, 1496
PctI GAATGC 2 cut(s) 939, 2050
PfeI GAWTC 1 cut(s) 1113
PflMI CCANNNNNTGG 1 cut(s) 973
PkrI GCNGC 8 cut(s) 162, 214, 1465, 1627, 1912, 1915, 1918, 2009
PleI GAGTC 4 cut(s) 74, 340, 1150, 1490
PmeI GTTTAAAC 1 cut(s) 1831
PpsI GAGTC 4 cut(s) 74, 340, 1150, 1490
Psp6I CCWGG 3 cut(s) 1338, 1740, 1985
PspFI CCCAGC 1 cut(s) 670
PspGI CCWGG 3 cut(s) 1338, 1740, 1985
PspN4I GGNNCC 3 cut(s) 366, 1075, 1497
PspPI GGNCC 3 cut(s) 474, 1495, 1616
PstI CTGCAG 1 cut(s) 1468
PstNI CAGNNNCTG 1 cut(s) 977
RruI TCGCGA 1 cut(s) 870
RsaI GTAC 6 cut(s) 417, 875, 927, 1057, 2052, 2114
RsaNI GTAC 6 cut(s) 416, 874, 926, 1056, 2051, 2113
RseI CAYNNNNRTG 3 cut(s) 534, 540, 1988
SalI GTCGAC 1 cut(s) 1121
SaqAI TTAA 9 cut(s) 18, 521, 575, 1401, 1539, 1557, 1830, 1893, 2155
SatI GCNGC 8 cut(s) 161, 213, 1464, 1626, 1911, 1914, 1917, 2008
Sau3AI GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
Sau96I GGNCC 3 cut(s) 474, 1495, 1616
ScaI AGTACT 3 cut(s) 875, 1057, 2052
SchI GAGTC 4 cut(s) 74, 341, 1151, 1491
ScrFI CCNGG 4 cut(s) 930, 1340, 1742, 1987
SduI GDGCHC 2 cut(s) 529, 1591
SfaNI GCATC 3 cut(s) 889, 920, 2080
SfcI CTRYAG 2 cut(s) 744, 1464
SfuI TTCGAA 1 cut(s) 1702
SinI GGWCC 3 cut(s) 474, 1495, 1616
SmiMI CAYNNNNRTG 3 cut(s) 534, 540, 1988
SmlI CTYRAG 5 cut(s) 520, 1430, 1538, 1556, 2016
SmoI CTYRAG 5 cut(s) 520, 1430, 1538, 1556, 2016
SphI GCATGC 2 cut(s) 1605, 1724
Sse9I AATT 9 cut(s) 495, 612, 675, 1030, 1087, 1333, 1550, 1749, 2066
SsiI CCGC 6 cut(s) 95, 160, 213, 229, 274, 320
SspI AATATT 1 cut(s) 2148
SspMI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
StyD4I CCNGG 4 cut(s) 928, 1338, 1740, 1985
TaaI ACNGT 7 cut(s) 186, 517, 878, 1001, 1580, 2112, 2134
TaiI ACGT 3 cut(s) 1072, 1132, 1410
TasI AATT 9 cut(s) 495, 612, 675, 1030, 1087, 1333, 1550, 1749, 2066
TatI WGTACW 5 cut(s) 415, 873, 1055, 2050, 2112
TauI GCSGC 2 cut(s) 163, 215
TfiI GAWTC 1 cut(s) 1113
Tru1I TTAA 9 cut(s) 18, 521, 575, 1401, 1539, 1557, 1830, 1893, 2155
Tru9I TTAA 9 cut(s) 18, 521, 575, 1401, 1539, 1557, 1830, 1893, 2155
TscAI CASTG 4 cut(s) 520, 978, 1180, 1680
TseFI GTSAC 4 cut(s) 200, 662, 844, 1574
TseI GCWGC 6 cut(s) 1463, 1625, 1910, 1913, 1916, 2007
Tsp45I GTSAC 4 cut(s) 200, 662, 844, 1574
TspDTI ATGAA 7 cut(s) 235, 606, 971, 1451, 1704, 1788, 1802
TspGWI ACGGA 3 cut(s) 96, 124, 161
TspRI CASTG 4 cut(s) 520, 978, 1180, 1680
Van91I CCANNNNNTGG 1 cut(s) 973
Vha464I CTTAAG 3 cut(s) 520, 1538, 1556
VpaK11BI GGWCC 3 cut(s) 474, 1495, 1616
XapI RAATTY 6 cut(s) 612, 1030, 1087, 1333, 1550, 2066
XbaI TCTAGA 1 cut(s) 652
XceI RCATGY 4 cut(s) 416, 539, 1605, 1724
XcmI CCANNNNNNNNNTGG 2 cut(s) 974, 1748
XmiI GTMKAC 1 cut(s) 1122
XspI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
ZrmI AGTACT 3 cut(s) 875, 1057, 2052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.