Rroxscaffold_2G00138450

CTLH/CRA C-terminal to LisH motif domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0008461
Physical Location & Seq
Forward (+)
76590524 .. 76595006
4483 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00138450.1

Sequence Viewer

Length: 2157 bp
ATGGACTCAATGCCTATTAACTGGGAAGCCCTCGACGCTCTCATAATCGATTTCGCGAAATCCGAGAACCTTATCGAAGACTCCTTCTCGTCTCCTCCGTCATCTCCGTCGCCGTCGTCCTCCTCGTCGTCGTCCGTTTCGTCGACGTCGTATCACTCGCGGCTGATTATCCGTCAGATCAGACGGTCGTTGGAGGTCGGTGACATTGACGCCGCCGTCGATCTCCTCCGCTCCCACGCGCCGTTCATCCTTGACGATCACCGCCTCCTCTTCCGCCTCCAGAAACAGAGGTTTATTGAGCTGTTGAGGAGAGGCTCGGCGGAGGCGCGTGAGTCGGCGATTAGTTGCCTGAGAACTGCTCTGGCTCCTTGTGCACTTGACGCCTATCCGGAAGCATATGAGGAGTTCAAGCATGTACTACTAGCTTTTATATATGATAAAGACGATCAAGCTTCTCCAGTAGCAAGTGAGTGGTCCGAAAGGAGGAGGTTTGACATTGCTGGATTGGTTTCCACTGTCTTAAGAGCCCATTTACATGCCTATGATCCAGTTTTCTCAATGACCTTGATATATTTAATAAGCATACACAAGGGCTTTTGTCTTCGTCAAGGAATTTCATCACCCATTTCAGACCTTACGACGAGGTTGCTTCTAGAGGAGCGTGACCCCCCAGCAATTCCCCAAGAGAGCCTGTCTGAAGCACCTCCTTTTGATGAGGTGGACATACAAGCTCTAGCACACGCTGTAGAACTTACAAGGCAGGGAGCAGTAGATAGTTTGAGATTTGCTAAGGGTGATTTGTTTCAGGCTTTTCAGAACGAAATATGTAGAATGAGAGTTGATGTTACCCTGCTTGATGAGCTTGTTCGTGAGTACTGTGTTTATAGGGGCATTGTGGATGCTGGTCTTGCATCTTCTTCTGTTGTACCTGGAATGCAAAGCCCTTCCAAATCTATGAAAGTTGACCAATCAGTGGTTGGTTATTCTTTGTCAAGAGACAGTTCTCACGAGGTGGAATATGCCAGCAAAAATTCTGATGGTGAAGTTTCCATTAGTACTGATCAGCGACGTGGTTCCCCTGAAAAGAATTCTGATGTGGCTAGCATGGAAGGAATCGAGGTCGACCTACGTTATGCTTGTGAGTCAACCAGCAACCAGGAAGATTGTAGCACCAGTGGATCACATCAGCCTGAAAATCTTAGAGTTCCACAAAGAAACAGAACCAATGTAAGTGCAGAAAGAAGTAAGCGGAAGCGATGGAGGGGAAGACAAGATGATCTTGCGTTTATTCCTGGTGTTTCTTGTAATCAAATAAGTAAAGGAATAAGCTCAAATTCCCCGGTTTCCGATACATTGTCTTCCAAGGAGAAGCAGGCTTCAGAATGTTTAGTTGTAGATGTTAACAACGTGGATAAATATGAGATTGTGCTTGAGATGAAGGAACTAGCTAGCAAAGGAATGGCTGCAGAGGTTGTAGAAGGAGTCAACTCGATGGACCCGAACTTTTTTGGGCAAAATCCTCTTTTGCTGTTTCAACTTAAGCAGGTTGAATTCCTCAAGCTTGTCAGCTCTGGTGACTGTTCTAGTGCTCTGAGGGTTGCATGCTCTCATCTTGGTCCTTTGGCTGCTAGTAACCCATCTTTACTGAAATCCTTGAAGGAGACTTTATTAGCACTGCTCCAACCTGATGAAGATGCACTTCGAAAAGGCTTCCCCTTGCATGCTCTTGCAACTTCACTCCAGGTTGCAATTGGGAGGAGGCTTGGCATTGATGAACCACAGCTTATGAAAATAATGAGAGCAACCCTTCACACACATAATGAGTGGTTTAAGCTTCAAATGTGTAAGGATCACTTTGAAAGTCTATTGAGGATTGATTTCTTGAAAGAAGTTAATATGCCTTCGCTTACTGCTGCTGCAACATCAAAGTCAAATGCTGATAGTTGCTCTAATGGGTCTTCCCAAGTTACAATATCTTCAAGCACCAGGATGGTGGAAGATGGGAGCAGCCTGTCTCAAGTGTCATCGAGAGATGTTGACGAGAATGCAATACTGAAAGTAATGGAATTTCTAGCTCTGCCGAGAGCAGATGCCATCCATCTTCTTGGACAGTACAATGGAAATGCTGAGACGGTCATTCAGCAAATATTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLTH

Protein Analysis

718

Amino Acids

79.23

Weight (kDa)

5.29

Isoelectric Point (pI)

53.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTLH PF10607 58 - 172 2.2e-11 CTLH/CRA C-terminal to LisH motif domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 215
AatII GACGTC 1 cut(s) 149
Acc36I ACCTGC 1 cut(s) 1534
AccB7I CCANNNNNTGG 1 cut(s) 973
AccBSI CCGCTC 1 cut(s) 231
AccI GTMKAC 2 cut(s) 143, 1122
AccII CGCG 4 cut(s) 56, 160, 239, 328
AccIII TCCGGA 1 cut(s) 388
AciI CCGC 7 cut(s) 160, 213, 229, 262, 274, 320, 1249
AclWI GGATC 3 cut(s) 539, 1186, 1857
AcsI RAATTY 6 cut(s) 612, 1030, 1087, 1333, 1550, 2066
AcuI CTGAAG 2 cut(s) 717, 1362
AcyI GRCGYC 3 cut(s) 146, 210, 381
AdeI CACNNNGTG 1 cut(s) 1012
AfaI GTAC 5 cut(s) 417, 875, 927, 1057, 2114
AfiI CCNNNNNNNGG 2 cut(s) 483, 973
AflII CTTAAG 2 cut(s) 520, 1538
AgsI TTSAA 8 cut(s) 409, 1535, 1550, 1657, 1838, 1859, 1885, 1980
AjiI CACGTC 1 cut(s) 1070
AjnI CCWGG 5 cut(s) 928, 1155, 1291, 1740, 1985
Alw21I GWGCWC 2 cut(s) 376, 1591
Alw26I GTCTC 5 cut(s) 96, 990, 1655, 2019, 2123
Alw44I GTGCAC 1 cut(s) 372
AlwI GGATC 3 cut(s) 539, 1186, 1857
Aor13HI TCCGGA 1 cut(s) 388
ApaLI GTGCAC 1 cut(s) 372
ApeKI GCWGC 5 cut(s) 1463, 1625, 1913, 1916, 2007
ApoI RAATTY 6 cut(s) 612, 1030, 1087, 1333, 1550, 2066
AspLEI GCGC 2 cut(s) 241, 328
AspS9I GGNCC 3 cut(s) 474, 1495, 1616
AsuC2I CCSGG 1 cut(s) 1340
AsuHPI GGTGA 6 cut(s) 212, 251, 612, 806, 1052, 1586
AsuII TTCGAA 1 cut(s) 1702
AsuNHI GCTAGC 2 cut(s) 1100, 1448
AvaII GGWCC 3 cut(s) 474, 1495, 1616
BaeGI GKGCMC 1 cut(s) 376
BanII GRGCYC 1 cut(s) 529
BauI CACGAG 1 cut(s) 1007
BbsI GAAGAC 5 cut(s) 84, 593, 1273, 1350, 1950
Bbv12I GWGCWC 2 cut(s) 376, 1591
BbvI GCAGC 5 cut(s) 1450, 1612, 1900, 1903, 2019
BccI CCATC 8 cut(s) 1031, 1251, 1486, 1645, 1984, 1994, 2102, 2106
BceAI ACGGC 3 cut(s) 97, 200, 226
BcgI CGANNNNNNTGC 2 cut(s) 628, 662
BciT130I CCWGG 5 cut(s) 930, 1157, 1293, 1742, 1987
BclI TGATCA 1 cut(s) 1060
BcnI CCSGG 1 cut(s) 1340
BcoDI GTCTC 5 cut(s) 96, 990, 1655, 2019, 2123
BfaI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
BfmI CTRYAG 2 cut(s) 744, 1464
BfrI CTTAAG 2 cut(s) 520, 1538
BfuAI ACCTGC 1 cut(s) 1534
BisI GCNGC 7 cut(s) 161, 213, 1464, 1626, 1914, 1917, 2008
BlsI GCNGC 7 cut(s) 162, 214, 1465, 1627, 1915, 1918, 2009
BmcAI AGTACT 2 cut(s) 875, 1057
Bme1390I CCNGG 6 cut(s) 930, 1157, 1293, 1340, 1742, 1987
Bme18I GGWCC 3 cut(s) 474, 1495, 1616
BmgBI CACGTC 1 cut(s) 1070
BmgT120I GGNCC 3 cut(s) 474, 1495, 1616
BmiI GGNNCC 3 cut(s) 366, 1075, 1497
BmrFI CCNGG 6 cut(s) 930, 1157, 1293, 1340, 1742, 1987
BmrI ACTGGG 1 cut(s) 31
BmsI GCATC 4 cut(s) 889, 920, 1684, 2080
BmtI GCTAGC 2 cut(s) 1104, 1452
BmuI ACTGGG 1 cut(s) 31
BpiI GAAGAC 5 cut(s) 84, 593, 1273, 1350, 1950
BplI GAGNNNNNCTC 2 cut(s) 343, 375
BpmI CTGGAG 3 cut(s) 263, 441, 1724
Bpu10I CCTNAGC 1 cut(s) 789
Bpu14I TTCGAA 1 cut(s) 1702
BpuEI CTTGAG 3 cut(s) 1451, 1541, 2001
BpuMI CCSGG 1 cut(s) 1340
Bsa29I ATCGAT 1 cut(s) 48
BsaHI GRCGYC 3 cut(s) 146, 210, 381
BsaJI CCNNGG 2 cut(s) 1338, 1362
BsaWI WCCGGW 1 cut(s) 388
Bsc4I CCNNNNNNNGG 2 cut(s) 483, 973
Bse1I ACTGG 4 cut(s) 26, 458, 548, 1173
Bse3DI GCAATG 1 cut(s) 495
BseAI TCCGGA 1 cut(s) 388
BseBI CCWGG 5 cut(s) 930, 1157, 1293, 1742, 1987
BseCI ATCGAT 1 cut(s) 48
BseDI CCNNGG 2 cut(s) 1338, 1362
BseGI GGATG 4 cut(s) 246, 904, 1995, 2094
BseLI CCNNNNNNNGG 2 cut(s) 483, 973
BseMI GCAATG 1 cut(s) 495
BseMII CTCAG 3 cut(s) 341, 1583, 2118
BseNI ACTGG 4 cut(s) 26, 458, 548, 1173
BseRI GAGGAG 9 cut(s) 84, 112, 215, 257, 322, 416, 499, 671, 1771
BseSI GKGCMC 1 cut(s) 376
BseXI GCAGC 5 cut(s) 1450, 1612, 1900, 1903, 2019
BseYI CCCAGC 1 cut(s) 670
BsgI GTGCAG 1 cut(s) 1254
Bsh1236I CGCG 4 cut(s) 56, 160, 239, 328
Bsh1285I CGRYCG 1 cut(s) 188
BshVI ATCGAT 1 cut(s) 48
BsiEI CGRYCG 1 cut(s) 188
BsiHKAI GWGCWC 2 cut(s) 376, 1591
BsiSI CCGG 2 cut(s) 389, 1340
BslI CCNNNNNNNGG 2 cut(s) 483, 973
BsmAI GTCTC 5 cut(s) 96, 990, 1655, 2019, 2123
BsmBI CGTCTC 2 cut(s) 96, 2123
BsmI GAATGC 2 cut(s) 939, 2050
Bsp119I TTCGAA 1 cut(s) 1702
Bsp1286I GDGCHC 3 cut(s) 376, 529, 1591
Bsp13I TCCGGA 1 cut(s) 388
Bsp143I GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
Bsp68I TCGCGA 1 cut(s) 56
BspACI CCGC 7 cut(s) 160, 213, 229, 262, 274, 320, 1249
BspCNI CTCAG 3 cut(s) 342, 1584, 2119
BspDI ATCGAT 1 cut(s) 48
BspEI TCCGGA 1 cut(s) 388
BspFNI CGCG 4 cut(s) 56, 160, 239, 328
BspLI GGNNCC 3 cut(s) 366, 1075, 1497
BspMAI CTGCAG 1 cut(s) 1468
BspMI ACCTGC 1 cut(s) 1534
BspOI GCTAGC 2 cut(s) 1104, 1452
BspPI GGATC 3 cut(s) 539, 1186, 1857
BspT104I TTCGAA 1 cut(s) 1702
BspTI CTTAAG 2 cut(s) 520, 1538
BsrBI CCGCTC 1 cut(s) 231
BsrDI GCAATG 1 cut(s) 495
BsrI ACTGG 4 cut(s) 26, 458, 548, 1173
BssECI CCNNGG 2 cut(s) 1338, 1362
BssMI GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
BssNI GRCGYC 3 cut(s) 146, 210, 381
BssSI CACGAG 1 cut(s) 1007
BssT1I CCWWGG 1 cut(s) 1362
Bst2BI CACGAG 1 cut(s) 1007
Bst2UI CCWGG 5 cut(s) 930, 1157, 1293, 1742, 1987
Bst4CI ACNGT 7 cut(s) 186, 517, 878, 1001, 1580, 2112, 2134
Bst6I CTCTTC 1 cut(s) 275
BstACI GRCGYC 3 cut(s) 146, 210, 381
BstAFI CTTAAG 2 cut(s) 520, 1538
BstBI TTCGAA 1 cut(s) 1702
BstC8I GCNNGC 6 cut(s) 1024, 1102, 1374, 1450, 1603, 1722
BstDEI CTNAG 5 cut(s) 350, 789, 1199, 1592, 2127
BstF5I GGATG 4 cut(s) 246, 904, 1995, 2094
BstFNI CGCG 4 cut(s) 56, 160, 239, 328
BstHHI GCGC 2 cut(s) 241, 328
BstKTI GATC 9 cut(s) 180, 223, 259, 448, 547, 1063, 1181, 1279, 1852
BstMAI GTCTC 5 cut(s) 96, 990, 1655, 2019, 2123
BstMBI GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
BstMCI CGRYCG 1 cut(s) 188
BstMWI GCNNNNNNNGC 5 cut(s) 35, 371, 380, 859, 908
BstNI CCWGG 5 cut(s) 930, 1157, 1293, 1742, 1987
BstNSI RCATGY 4 cut(s) 416, 539, 1605, 1724
BstSCI CCNGG 6 cut(s) 928, 1155, 1291, 1338, 1740, 1985
BstSFI CTRYAG 2 cut(s) 744, 1464
BstSLI GKGCMC 1 cut(s) 376
BstUI CGCG 4 cut(s) 56, 160, 239, 328
BstV1I GCAGC 5 cut(s) 1450, 1612, 1900, 1903, 2019
BstV2I GAAGAC 5 cut(s) 84, 593, 1273, 1350, 1950
BstXI CCANNNNNNTGG 2 cut(s) 1993, 2105
Bsu15I ATCGAT 1 cut(s) 48
BsuTUI ATCGAT 1 cut(s) 48
BtgZI GCGATG 1 cut(s) 1270
BtrI CACGTC 1 cut(s) 1070
BtsCI GGATG 4 cut(s) 246, 904, 1995, 2094
BtsI GCAGTG 1 cut(s) 1673
BtsIMutI CAGTG 4 cut(s) 513, 978, 1180, 1673
BtuMI TCGCGA 1 cut(s) 56
BveI ACCTGC 1 cut(s) 1534
Cac8I GCNNGC 6 cut(s) 1024, 1102, 1374, 1450, 1603, 1722
CfoI GCGC 2 cut(s) 241, 328
Cfr13I GGNCC 3 cut(s) 474, 1495, 1616
ClaI ATCGAT 1 cut(s) 48
CseI GACGC 3 cut(s) 44, 218, 389
Csp6I GTAC 5 cut(s) 416, 874, 926, 1056, 2113
CviAII CATG 5 cut(s) 413, 536, 1105, 1602, 1721
CviQI GTAC 5 cut(s) 416, 874, 926, 1056, 2113
DdeI CTNAG 5 cut(s) 350, 789, 1199, 1592, 2127
DpnI GATC 9 cut(s) 179, 222, 258, 447, 546, 1062, 1180, 1278, 1851
DpnII GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
DraIII CACNNNGTG 1 cut(s) 1012
DrdI GACNNNNNNGTC 1 cut(s) 215
DseDI GACNNNNNNGTC 1 cut(s) 215
Eam1104I CTCTTC 1 cut(s) 275
EarI CTCTTC 1 cut(s) 275
EciI GGCGGA 2 cut(s) 263, 335
Eco130I CCWWGG 1 cut(s) 1362
Eco24I GRGCYC 1 cut(s) 529
Eco47I GGWCC 3 cut(s) 474, 1495, 1616
Eco57I CTGAAG 2 cut(s) 717, 1362
EcoRI GAATTC 2 cut(s) 1087, 1550
EcoRII CCWGG 5 cut(s) 928, 1155, 1291, 1740, 1985
EcoT14I CCWWGG 1 cut(s) 1362
EcoT38I GRGCYC 1 cut(s) 529
ErhI CCWWGG 1 cut(s) 1362
Esp3I CGTCTC 2 cut(s) 96, 2123
FaeI CATG 5 cut(s) 416, 539, 1108, 1605, 1724
FalI AAGNNNNNCTT 6 cut(s) 1263, 1295, 1683, 1715, 1838, 1870
FatI CATG 5 cut(s) 412, 535, 1104, 1601, 1720
FauNDI CATATG 1 cut(s) 397
FbaI TGATCA 1 cut(s) 1060
FblI GTMKAC 2 cut(s) 143, 1122
Fnu4HI GCNGC 7 cut(s) 161, 213, 1464, 1626, 1914, 1917, 2008
FokI GGATG 4 cut(s) 233, 911, 2002, 2081
FriOI GRGCYC 1 cut(s) 529
Fsp4HI GCNGC 7 cut(s) 161, 213, 1464, 1626, 1914, 1917, 2008
FspBI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
GlaI GCGC 2 cut(s) 240, 327
GluI GCNGC 7 cut(s) 161, 213, 1464, 1626, 1914, 1917, 2008
GsaI CCCAGC 1 cut(s) 674
GsuI CTGGAG 3 cut(s) 263, 441, 1724
HapII CCGG 2 cut(s) 389, 1340
HgaI GACGC 3 cut(s) 44, 218, 389
HhaI GCGC 2 cut(s) 241, 328
Hin1I GRCGYC 3 cut(s) 146, 210, 381
Hin1II CATG 5 cut(s) 416, 539, 1108, 1605, 1724
Hin6I GCGC 2 cut(s) 239, 326
HinP1I GCGC 2 cut(s) 239, 326
HincII GTYRAC 7 cut(s) 144, 964, 1123, 1146, 1402, 1486, 2038
HindII GTYRAC 7 cut(s) 144, 964, 1123, 1146, 1402, 1486, 2038
HindIII AAGCTT 3 cut(s) 450, 1559, 1832
HinfI GANTC 6 cut(s) 5, 80, 332, 1113, 1142, 1482
HpaI GTTAAC 1 cut(s) 1402
HpaII CCGG 2 cut(s) 389, 1340
HphI GGTGA 6 cut(s) 212, 251, 612, 806, 1052, 1586
Hpy166II GTNNAC 9 cut(s) 144, 374, 721, 964, 1123, 1146, 1402, 1486, 2038
Hpy188III TCNNGA 9 cut(s) 55, 280, 389, 653, 869, 993, 1007, 1882, 2028
Hpy8I GTNNAC 9 cut(s) 144, 374, 721, 964, 1123, 1146, 1402, 1486, 2038
HpyAV CCTTC 8 cut(s) 94, 954, 1103, 1432, 1472, 1651, 1817, 1911
HpyCH4III ACNGT 7 cut(s) 186, 517, 878, 1001, 1580, 2112, 2134
HpyCH4IV ACGT 4 cut(s) 146, 1069, 1129, 1407
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 371, 380, 859, 908
HpyF3I CTNAG 5 cut(s) 350, 789, 1199, 1592, 2127
HpySE526I ACGT 4 cut(s) 146, 1069, 1129, 1407
Hsp92I GRCGYC 3 cut(s) 146, 210, 381
Hsp92II CATG 5 cut(s) 416, 539, 1108, 1605, 1724
HspAI GCGC 2 cut(s) 239, 326
Kpn2I TCCGGA 1 cut(s) 388
Ksp22I TGATCA 1 cut(s) 1060
KspAI GTTAAC 1 cut(s) 1402
Kzo9I GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
LmnI GCTCC 6 cut(s) 236, 370, 658, 764, 1683, 2004
Lsp1109I GCAGC 5 cut(s) 1450, 1612, 1900, 1903, 2019
LweI GCATC 4 cut(s) 889, 920, 1684, 2080
MaeI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
MaeII ACGT 4 cut(s) 146, 1069, 1129, 1407
MaeIII GTNAC 6 cut(s) 200, 662, 844, 1574, 1631, 1966
MalI GATC 9 cut(s) 179, 222, 258, 447, 546, 1062, 1180, 1278, 1851
MbiI CCGCTC 1 cut(s) 231
MboI GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
MfeI CAATTG 1 cut(s) 1749
MhlI GDGCHC 3 cut(s) 376, 529, 1591
MluCI AATT 8 cut(s) 612, 675, 1030, 1087, 1333, 1550, 1749, 2066
MlyI GAGTC 4 cut(s) 74, 341, 1151, 1491
MmeI TCCRAC 2 cut(s) 171, 1705
MroI TCCGGA 1 cut(s) 388
MseI TTAA 8 cut(s) 18, 521, 575, 1401, 1539, 1830, 1893, 2155
MslI CAYNNNNRTG 3 cut(s) 534, 540, 1988
MspCI CTTAAG 2 cut(s) 520, 1538
MspI CCGG 2 cut(s) 389, 1340
MspR9I CCNGG 6 cut(s) 930, 1157, 1293, 1340, 1742, 1987
MunI CAATTG 1 cut(s) 1749
Mva1269I GAATGC 2 cut(s) 939, 2050
MvaI CCWGG 5 cut(s) 930, 1157, 1293, 1742, 1987
MvnI CGCG 4 cut(s) 56, 160, 239, 328
MwoI GCNNNNNNNGC 5 cut(s) 35, 371, 380, 859, 908
NciI CCSGG 1 cut(s) 1340
NdeI CATATG 1 cut(s) 397
NdeII GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
NheI GCTAGC 2 cut(s) 1100, 1448
NlaIII CATG 5 cut(s) 416, 539, 1108, 1605, 1724
NlaIV GGNNCC 3 cut(s) 366, 1075, 1497
NmeAIII GCCGAG 2 cut(s) 296, 2106
NmuCI GTSAC 3 cut(s) 200, 662, 1574
NruI TCGCGA 1 cut(s) 56
NspI RCATGY 4 cut(s) 416, 539, 1605, 1724
NspV TTCGAA 1 cut(s) 1702
PaeI GCATGC 2 cut(s) 1605, 1724
PcsI WCGNNNNNNNCGW 7 cut(s) 60, 95, 122, 137, 146, 216, 1496
PctI GAATGC 2 cut(s) 939, 2050
PfeI GAWTC 1 cut(s) 1113
PflMI CCANNNNNTGG 1 cut(s) 973
PkrI GCNGC 7 cut(s) 162, 214, 1465, 1627, 1915, 1918, 2009
PleI GAGTC 4 cut(s) 74, 340, 1150, 1490
PpsI GAGTC 4 cut(s) 74, 340, 1150, 1490
Psp6I CCWGG 5 cut(s) 928, 1155, 1291, 1740, 1985
PspFI CCCAGC 1 cut(s) 670
PspGI CCWGG 5 cut(s) 928, 1155, 1291, 1740, 1985
PspN4I GGNNCC 3 cut(s) 366, 1075, 1497
PspPI GGNCC 3 cut(s) 474, 1495, 1616
PstI CTGCAG 1 cut(s) 1468
RruI TCGCGA 1 cut(s) 56
RsaI GTAC 5 cut(s) 417, 875, 927, 1057, 2114
RsaNI GTAC 5 cut(s) 416, 874, 926, 1056, 2113
RseI CAYNNNNRTG 3 cut(s) 534, 540, 1988
SalI GTCGAC 2 cut(s) 142, 1121
SaqAI TTAA 8 cut(s) 18, 521, 575, 1401, 1539, 1830, 1893, 2155
SatI GCNGC 7 cut(s) 161, 213, 1464, 1626, 1914, 1917, 2008
Sau3AI GATC 9 cut(s) 177, 220, 256, 445, 544, 1060, 1178, 1276, 1849
Sau96I GGNCC 3 cut(s) 474, 1495, 1616
ScaI AGTACT 2 cut(s) 875, 1057
SchI GAGTC 4 cut(s) 74, 341, 1151, 1491
ScrFI CCNGG 6 cut(s) 930, 1157, 1293, 1340, 1742, 1987
SduI GDGCHC 3 cut(s) 376, 529, 1591
SfaNI GCATC 4 cut(s) 889, 920, 1684, 2080
SfcI CTRYAG 2 cut(s) 744, 1464
SfuI TTCGAA 1 cut(s) 1702
SgrDI CGTCGACG 1 cut(s) 142
SinI GGWCC 3 cut(s) 474, 1495, 1616
SmiMI CAYNNNNRTG 3 cut(s) 534, 540, 1988
SmlI CTYRAG 5 cut(s) 520, 1430, 1538, 1556, 2016
SmoI CTYRAG 5 cut(s) 520, 1430, 1538, 1556, 2016
SphI GCATGC 2 cut(s) 1605, 1724
Sse9I AATT 8 cut(s) 612, 675, 1030, 1087, 1333, 1550, 1749, 2066
SsiI CCGC 7 cut(s) 160, 213, 229, 262, 274, 320, 1249
SspI AATATT 1 cut(s) 2148
SspMI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
StyD4I CCNGG 6 cut(s) 928, 1155, 1291, 1338, 1740, 1985
StyI CCWWGG 1 cut(s) 1362
TaaI ACNGT 7 cut(s) 186, 517, 878, 1001, 1580, 2112, 2134
TaiI ACGT 4 cut(s) 149, 1072, 1132, 1410
TasI AATT 8 cut(s) 612, 675, 1030, 1087, 1333, 1550, 1749, 2066
TatI WGTACW 4 cut(s) 415, 873, 1055, 2112
TauI GCSGC 2 cut(s) 163, 215
TfiI GAWTC 1 cut(s) 1113
Tru1I TTAA 8 cut(s) 18, 521, 575, 1401, 1539, 1830, 1893, 2155
Tru9I TTAA 8 cut(s) 18, 521, 575, 1401, 1539, 1830, 1893, 2155
TscAI CASTG 4 cut(s) 520, 978, 1180, 1680
TseFI GTSAC 3 cut(s) 200, 662, 1574
TseI GCWGC 5 cut(s) 1463, 1625, 1913, 1916, 2007
Tsp45I GTSAC 3 cut(s) 200, 662, 1574
TspDTI ATGAA 7 cut(s) 235, 606, 971, 1451, 1704, 1788, 1802
TspGWI ACGGA 4 cut(s) 87, 96, 124, 161
TspRI CASTG 4 cut(s) 520, 978, 1180, 1680
Van91I CCANNNNNTGG 1 cut(s) 973
Vha464I CTTAAG 2 cut(s) 520, 1538
VneI GTGCAC 1 cut(s) 372
VpaK11BI GGWCC 3 cut(s) 474, 1495, 1616
XapI RAATTY 6 cut(s) 612, 1030, 1087, 1333, 1550, 2066
XbaI TCTAGA 1 cut(s) 652
XceI RCATGY 4 cut(s) 416, 539, 1605, 1724
XcmI CCANNNNNNNNNTGG 2 cut(s) 974, 1748
XmiI GTMKAC 2 cut(s) 143, 1122
XspI CTAG 9 cut(s) 422, 653, 734, 1101, 1445, 1449, 1584, 1629, 2072
ZraI GACGTC 1 cut(s) 147
ZrmI AGTACT 2 cut(s) 875, 1057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.