ATCG00340

PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
Pt
OG0008317
Physical Location & Seq
Reverse (-)
37375 .. 39579
2205 bp
Loading structure...
UTR
Exon/CDS
Intron
ATCG00340.1

Sequence Viewer

Length: 2205 bp
ATGGCATTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCTCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAATTTGTTTCATGTAGCTTGGCAAGGAAATTTTGAGACATGGGTACAAGACCCTTTACATGTAAGACCGATTGCTCATGCTATTTGGGATCCTCATTTTGGTCAACCGGCTGTGGAAGCGTTTACTCGAGGAGGTGCTCTTGGCCCGGTGAATATAGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGTACTAATGAAGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTCTGCCCTATCCTTAATAGGGGGTTGGTTACACCTACAACCAAAATGGAAACCAAGAGTTTCGTGGTTCAAAAATGCTGAATCTCGTCTGAATCATCATTTGTCAGGACTATTCGGGGTAAGCTCATTGGCTTGGACAGGTCATTTAGTCCATGTCGCTATTCCTGCATCCAGGGGGGAATATGTTCGATGGAATAATTTCTTAAATGTATTACCGCATCCCCAAGGGTTAGGCCCACTTTTTACGGGTCAGTGGAATCTTTATGCTCAAAACCCCGACTCGAGTAGTCATTTATTTGGTACCTCCCAAGGATCCGGAACTGCCATTCTAACCCTTCTTGGGGGATTCCATCCACAAACGCAAAGTTTATGGCTAACCGATATGGCACATCATCATTTAGCTATCGCAATTCTTTTCCTCATTGCGGGTCATATGTATAGAACGAACTTTGGAATCGGACACAGTATAAAAGATCTTTTAGAAGCACATATTCCTCCGGGAGGACGATTGGGGCGTGGGCATAAGGGTCTTTATGACACAATCAATAATTCGATTCATTTTCAATTAGGCCTTGCTCTAGCCTCCTTAGGAGTTATTACTTCCTTGGTAGCTCAACACATGTACTCTTTACCTGCTTATGCGTTCATAGCGCAAGATTTTACGACTCAAGCTGCGTTATATACCCATCACCAATATATTGCAGGATTCATCATGACAGGAGCTTTTGCTCATGGAGCTATCTTTTTTATTAGAGATTACAATCCAGAACAGAATGAGGATAACGTATTAGCAAGAATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAGCCTCTTTCTAGGGTTCCATACTTTGGGACTTTATGTTCATAACGACGTCATGCTTGCTTTTGGTACTCCCGAAAAACAAATCTTGATCGAACCTATATTTGCCCAATGGATACAATCTGCTCATGGGAAAACTTCATATGGATTTGATGTACTTTTATCTTCGACAAGTGGCCCAGCATTTAATGCGGGTCGCAGCATATGGTTGCCTGGCTGGTTAAATGCTATTAATGAGAATAGTAATTCATTATTCTTAACAATAGGTCCTGGAGATTTCTTGGTTCATCATGCTATTGCTTTAGGTTTACATACAACTACATTGATCTTAGTAAAAGGTGCTTTAGATGCACGTGGTTCCAAGTTAATGCCAGATAAAAAGGATTTCGGGTATAGTTTTCCTTGCGATGGTCCGGGACGAGGTGGTACTTGTGATATTTCGGCTTGGGACGCATTTTATTTGGCAGTTTTCTGGATGTTAAATACTATTGGATGGGTTACTTTTTATTGGCATTGGAAACACATCACATTATGGCAGGGTAACGTTTCACAGTTTAATGAATCTTCCACTTATTTGATGGGATGGTTAAGAGATTATCTATGGTTAAACTCTTCACAACTTATCAATGGATATAACCCGTTTGGTATGAATAGTTTATCAGTCTGGGCATGGATGTTCTTATTTGGGCATCTTGTTTGGGCTACAGGATTTATGTTCTTAATTTCCTGGCGTGGTTATTGGCAGGAATTGATTGAAACTTTAGCGTGGGCTCATGAACGCACACCTTTGGCAAATTTGATTCGCTGGAAAGATAAACCAGTAGCTCTTTCAATCGTGCAAGCAAGATTGGTTGGATTAGCTCACTTTTCTGTAGGTTATATATTCACTTATGCGGCTTTCTTGATTGCCTCCACATCGGGCAAATTCGGTTAA

Protein Analysis

734

Amino Acids

82.47

Weight (kDa)

6.89

Isoelectric Point (pI)

30.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PsaA_PsaB PF00223 8 - 727 0.0 Photosystem I psaA/psaB protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1326
Acc36I ACCTGC 1 cut(s) 1075
Acc65I GGTACC 1 cut(s) 734
AccB1I GGYRCC 1 cut(s) 734
AccB7I CCANNNNNTGG 1 cut(s) 1300
AccI GTMKAC 1 cut(s) 374
AccIII TCCGGA 2 cut(s) 185, 749
AciI CCGC 5 cut(s) 81, 650, 860, 1463, 2165
AclI AACGTT 1 cut(s) 1815
AclWI GGATC 4 cut(s) 272, 285, 741, 754
AcsI RAATTY 4 cut(s) 190, 217, 2065, 2195
AcuI CTGAAG 1 cut(s) 135
AcvI CACGTG 1 cut(s) 1625
AcyI GRCGYC 1 cut(s) 1323
AfaI GTAC 7 cut(s) 234, 391, 736, 1058, 1342, 1428, 1699
AfiI CCNNNNNNNGG 9 cut(s) 287, 453, 774, 775, 859, 935, 1300, 1679, 1691
AflIII ACRYGT 2 cut(s) 247, 1053
AgsI TTSAA 4 cut(s) 505, 998, 2027, 2103
AjnI CCWGG 4 cut(s) 605, 1483, 1540, 1997
AloI GAACNNNNNNTCC 2 cut(s) 1296, 1328
Alw21I GWGCWC 2 cut(s) 328, 418
Alw26I GTCTC 1 cut(s) 218
AlwI GGATC 4 cut(s) 272, 285, 741, 754
Ama87I CYCGRG 2 cut(s) 315, 715
Aor13HI TCCGGA 2 cut(s) 185, 749
AoxI GGCC 5 cut(s) 331, 667, 1003, 1272, 1447
ApeKI GCWGC 2 cut(s) 1106, 1470
ApoI RAATTY 4 cut(s) 190, 217, 2065, 2195
AseI ATTAAT 1 cut(s) 1503
Asp700I GAANNNNTTC 2 cut(s) 618, 632
Asp718I GGTACC 1 cut(s) 734
AspLEI GCGC 1 cut(s) 1087
AspS9I GGNCC 7 cut(s) 43, 332, 668, 1272, 1448, 1538, 1682
AsuC2I CCSGG 3 cut(s) 335, 933, 1686
AsuHPI GGTGA 2 cut(s) 349, 1115
AvaI CYCGRG 2 cut(s) 315, 715
AvaII GGWCC 3 cut(s) 43, 1538, 1682
AxyI CCTNAGG 1 cut(s) 1021
BamHI GGATCC 2 cut(s) 277, 746
BanI GGYRCC 1 cut(s) 734
BanII GRGCYC 2 cut(s) 418, 2044
BbrPI CACGTG 1 cut(s) 1625
Bbv12I GWGCWC 2 cut(s) 328, 418
BbvI GCAGC 2 cut(s) 1093, 1482
BccI CCATC 7 cut(s) 618, 792, 1128, 1673, 1758, 1843, 1848
BciT130I CCWGG 4 cut(s) 607, 1485, 1542, 1999
BciVI GTATCC 1 cut(s) 1380
BcnI CCSGG 3 cut(s) 335, 933, 1686
BcoDI GTCTC 1 cut(s) 218
BfaI CTAG 2 cut(s) 1013, 1286
BfmI CTRYAG 2 cut(s) 1974, 2142
BfuAI ACCTGC 1 cut(s) 1075
BfuI GTATCC 1 cut(s) 1380
BglII AGATCT 2 cut(s) 400, 907
BisI GCNGC 3 cut(s) 1107, 1471, 2166
BlpI GCTNAGC 1 cut(s) 34
BlsI GCNGC 3 cut(s) 1108, 1472, 2167
Bme1390I CCNGG 7 cut(s) 335, 607, 933, 1485, 1542, 1686, 1999
Bme18I GGWCC 3 cut(s) 43, 1538, 1682
BmeT110I CYCGRG 2 cut(s) 315, 715
BmgT120I GGNCC 7 cut(s) 43, 332, 668, 1272, 1448, 1538, 1682
BmiI GGNNCC 6 cut(s) 45, 279, 736, 748, 1292, 1630
BmrFI CCNGG 7 cut(s) 335, 607, 933, 1485, 1542, 1686, 1999
BmsI GCATC 4 cut(s) 611, 661, 1609, 1969
BpmI CTGGAG 2 cut(s) 432, 1563
Bpu10I CCTNAGC 1 cut(s) 39
Bpu1102I GCTNAGC 1 cut(s) 34
BpuEI CTTGAG 1 cut(s) 1086
BpuMI CCSGG 3 cut(s) 335, 933, 1686
BsaAI YACGTR 2 cut(s) 389, 1625
BsaBI GATNNNNATC 1 cut(s) 1194
BsaHI GRCGYC 1 cut(s) 1323
BsaJI CCNNGG 6 cut(s) 17, 28, 606, 658, 742, 1038
BsaWI WCCGGW 2 cut(s) 185, 749
Bsc4I CCNNNNNNNGG 9 cut(s) 287, 453, 774, 775, 859, 935, 1300, 1679, 1691
Bse118I RCCGGY 1 cut(s) 295
Bse1I ACTGG 2 cut(s) 415, 2090
Bse21I CCTNAGG 1 cut(s) 1021
Bse3DI GCAATG 1 cut(s) 855
Bse8I GATNNNNATC 1 cut(s) 1194
BseAI TCCGGA 2 cut(s) 185, 749
BseBI CCWGG 4 cut(s) 607, 1485, 1542, 1999
BseDI CCNNGG 6 cut(s) 17, 28, 606, 658, 742, 1038
BseGI GGATG 7 cut(s) 602, 652, 784, 1752, 1769, 1859, 1950
BseJI GATNNNNATC 1 cut(s) 1194
BseLI CCNNNNNNNGG 9 cut(s) 287, 453, 774, 775, 859, 935, 1300, 1679, 1691
BseMI GCAATG 1 cut(s) 855
BseMII CTCAG 1 cut(s) 53
BseNI ACTGG 2 cut(s) 415, 2090
BseRI GAGGAG 1 cut(s) 333
BseXI GCAGC 2 cut(s) 1093, 1482
BseYI CCCAGC 1 cut(s) 1450
BshFI GGCC 5 cut(s) 333, 669, 1005, 1274, 1449
BshNI GGYRCC 1 cut(s) 734
BsiHKAI GWGCWC 2 cut(s) 328, 418
BsiHKCI CYCGRG 2 cut(s) 315, 715
BsiSI CCGG 6 cut(s) 186, 296, 335, 750, 932, 1685
BslFI GGGAC 3 cut(s) 1317, 1701, 1733
BslI CCNNNNNNNGG 9 cut(s) 287, 453, 774, 775, 859, 935, 1300, 1679, 1691
BsmAI GTCTC 1 cut(s) 218
BsmFI GGGAC 3 cut(s) 1317, 1701, 1733
BsnI GGCC 5 cut(s) 333, 669, 1005, 1274, 1449
BsoBI CYCGRG 2 cut(s) 315, 715
Bsp1286I GDGCHC 3 cut(s) 328, 418, 2044
Bsp13I TCCGGA 2 cut(s) 185, 749
Bsp143I GATC 6 cut(s) 277, 400, 746, 907, 1362, 1596
Bsp1720I GCTNAGC 1 cut(s) 34
BspACI CCGC 5 cut(s) 81, 650, 860, 1463, 2165
BspANI GGCC 5 cut(s) 333, 669, 1005, 1274, 1449
BspCNI CTCAG 1 cut(s) 52
BspEI TCCGGA 2 cut(s) 185, 749
BspHI TCATGA 3 cut(s) 100, 1146, 2044
BspLI GGNNCC 6 cut(s) 45, 279, 736, 748, 1292, 1630
BspMI ACCTGC 1 cut(s) 1075
BspPI GGATC 4 cut(s) 272, 285, 741, 754
BspT107I GGYRCC 1 cut(s) 734
BsrDI GCAATG 1 cut(s) 855
BsrFI RCCGGY 1 cut(s) 295
BsrI ACTGG 2 cut(s) 415, 2090
BssAI RCCGGY 1 cut(s) 295
BssECI CCNNGG 6 cut(s) 17, 28, 606, 658, 742, 1038
BssMI GATC 6 cut(s) 277, 400, 746, 907, 1362, 1596
BssNAI GTATAC 1 cut(s) 375
BssNI GRCGYC 1 cut(s) 1323
BssT1I CCWWGG 5 cut(s) 17, 28, 658, 742, 1038
Bst1107I GTATAC 1 cut(s) 375
Bst2UI CCWGG 4 cut(s) 607, 1485, 1542, 1999
Bst4CI ACNGT 2 cut(s) 899, 1824
Bst6I CTCTTC 1 cut(s) 1888
BstACI GRCGYC 1 cut(s) 1323
BstAPI GCANNNNNTGC 1 cut(s) 1460
BstBAI YACGTR 2 cut(s) 389, 1625
BstC8I GCNNGC 3 cut(s) 1276, 1332, 2112
BstDEI CTNAG 4 cut(s) 34, 39, 1021, 1600
BstENI CCTNNNNNAGG 1 cut(s) 933
BstF5I GGATG 7 cut(s) 602, 652, 784, 1752, 1769, 1859, 1950
BstHHI GCGC 1 cut(s) 1087
BstKTI GATC 6 cut(s) 280, 403, 749, 910, 1365, 1599
BstMAI GTCTC 1 cut(s) 218
BstMBI GATC 6 cut(s) 277, 400, 746, 907, 1362, 1596
BstMWI GCNNNNNNNGC 7 cut(s) 305, 599, 1082, 1169, 1460, 1619, 1721
BstNI CCWGG 4 cut(s) 607, 1485, 1542, 1999
BstNSI RCATGY 2 cut(s) 251, 1057
BstSCI CCNGG 7 cut(s) 333, 605, 931, 1483, 1540, 1684, 1997
BstSFI CTRYAG 2 cut(s) 1974, 2142
BstSNI TACGTA 1 cut(s) 389
BstV1I GCAGC 2 cut(s) 1093, 1482
BstX2I RGATCY 4 cut(s) 277, 400, 746, 907
BstYI RGATCY 4 cut(s) 277, 400, 746, 907
BstZ17I GTATAC 1 cut(s) 375
Bsu36I CCTNAGG 1 cut(s) 1021
BsuI GTATCC 1 cut(s) 1380
BsuRI GGCC 5 cut(s) 333, 669, 1005, 1274, 1449
BtgZI GCGATG 1 cut(s) 1692
BtsCI GGATG 7 cut(s) 602, 652, 784, 1752, 1769, 1859, 1950
BtsIMutI CAGTG 2 cut(s) 371, 692
BveI ACCTGC 1 cut(s) 1075
Cac8I GCNNGC 3 cut(s) 1276, 1332, 2112
CciI TCATGA 3 cut(s) 100, 1146, 2044
CfoI GCGC 1 cut(s) 1087
Cfr10I RCCGGY 1 cut(s) 295
Cfr13I GGNCC 7 cut(s) 43, 332, 668, 1272, 1448, 1538, 1682
CseI GACGC 1 cut(s) 1730
Csp6I GTAC 7 cut(s) 233, 390, 735, 1057, 1341, 1427, 1698
CviQI GTAC 7 cut(s) 233, 390, 735, 1057, 1341, 1427, 1698
DdeI CTNAG 4 cut(s) 34, 39, 1021, 1600
DpnI GATC 6 cut(s) 279, 402, 748, 909, 1364, 1598
DpnII GATC 6 cut(s) 277, 400, 746, 907, 1362, 1596
Eam1104I CTCTTC 1 cut(s) 1888
EarI CTCTTC 1 cut(s) 1888
Ecl136II GAGCTC 1 cut(s) 416
Eco105I TACGTA 1 cut(s) 389
Eco130I CCWWGG 5 cut(s) 17, 28, 658, 742, 1038
Eco147I AGGCCT 1 cut(s) 1005
Eco24I GRGCYC 2 cut(s) 418, 2044
Eco47I GGWCC 3 cut(s) 43, 1538, 1682
Eco53kI GAGCTC 1 cut(s) 416
Eco57I CTGAAG 1 cut(s) 135
Eco72I CACGTG 1 cut(s) 1625
Eco81I CCTNAGG 1 cut(s) 1021
Eco88I CYCGRG 2 cut(s) 315, 715
EcoICRI GAGCTC 1 cut(s) 416
EcoNI CCTNNNNNAGG 1 cut(s) 933
EcoO109I RGGNCCY 2 cut(s) 43, 1538
EcoRII CCWGG 4 cut(s) 605, 1483, 1540, 1997
EcoT14I CCWWGG 5 cut(s) 17, 28, 658, 742, 1038
EcoT38I GRGCYC 2 cut(s) 418, 2044
ErhI CCWWGG 5 cut(s) 17, 28, 658, 742, 1038
FalI AAGNNNNNCTT 2 cut(s) 108, 140
FaqI GGGAC 3 cut(s) 1317, 1701, 1733
FauI CCCGC 2 cut(s) 853, 1456
FauNDI CATATG 3 cut(s) 867, 1414, 1475
FblI GTMKAC 1 cut(s) 374
Fnu4HI GCNGC 3 cut(s) 1107, 1471, 2166
FokI GGATG 7 cut(s) 589, 639, 771, 1759, 1776, 1866, 1957
FriOI GRGCYC 2 cut(s) 418, 2044
Fsp4HI GCNGC 3 cut(s) 1107, 1471, 2166
FspBI CTAG 2 cut(s) 1013, 1286
GlaI GCGC 1 cut(s) 1086
GluI GCNGC 3 cut(s) 1107, 1471, 2166
GsaI CCCAGC 1 cut(s) 1454
GsuI CTGGAG 2 cut(s) 432, 1563
HaeIII GGCC 5 cut(s) 333, 669, 1005, 1274, 1449
HapII CCGG 6 cut(s) 186, 296, 335, 750, 932, 1685
HgaI GACGC 1 cut(s) 1730
HhaI GCGC 1 cut(s) 1087
Hin1I GRCGYC 1 cut(s) 1323
Hin6I GCGC 1 cut(s) 1085
HinP1I GCGC 1 cut(s) 1085
HincII GTYRAC 1 cut(s) 293
HindII GTYRAC 1 cut(s) 293
HpaII CCGG 6 cut(s) 186, 296, 335, 750, 932, 1685
HphI GGTGA 2 cut(s) 349, 1115
Hpy166II GTNNAC 6 cut(s) 180, 293, 312, 375, 386, 1580
Hpy188I TCNGA 3 cut(s) 132, 525, 893
Hpy8I GTNNAC 6 cut(s) 180, 293, 312, 375, 386, 1580
Hpy99I CGWCG 2 cut(s) 60, 1325
HpyAV CCTTC 1 cut(s) 779
HpyCH4III ACNGT 2 cut(s) 899, 1824
HpyCH4IV ACGT 6 cut(s) 121, 388, 1218, 1323, 1624, 1815
HpyCH4V TGCA 4 cut(s) 602, 1136, 1622, 2110
HpyF10VI GCNNNNNNNGC 7 cut(s) 305, 599, 1082, 1169, 1460, 1619, 1721
HpyF3I CTNAG 4 cut(s) 34, 39, 1021, 1600
HpySE526I ACGT 6 cut(s) 121, 388, 1218, 1323, 1624, 1815
Hsp92I GRCGYC 1 cut(s) 1323
HspAI GCGC 1 cut(s) 1085
Kpn2I TCCGGA 2 cut(s) 185, 749
KpnI GGTACC 1 cut(s) 738
Kzo9I GATC 6 cut(s) 277, 400, 746, 907, 1362, 1596
LmnI GCTCC 3 cut(s) 413, 1154, 1169
Lsp1109I GCAGC 2 cut(s) 1093, 1482
LweI GCATC 4 cut(s) 611, 661, 1609, 1969
MaeI CTAG 2 cut(s) 1013, 1286
MaeII ACGT 6 cut(s) 121, 388, 1218, 1323, 1624, 1815
MaeIII GTNAC 3 cut(s) 462, 1768, 1811
MalI GATC 6 cut(s) 279, 402, 748, 909, 1364, 1598
MboI GATC 6 cut(s) 277, 400, 746, 907, 1362, 1596
MboII GAAGA 5 cut(s) 128, 410, 1428, 1827, 1875
MflI RGATCY 4 cut(s) 277, 400, 746, 907
MhlI GDGCHC 3 cut(s) 328, 418, 2044
MlyI GAGTC 3 cut(s) 106, 707, 1093
MmeI TCCRAC 1 cut(s) 2104
MroI TCCGGA 2 cut(s) 185, 749
MroXI GAANNNNTTC 2 cut(s) 618, 632
MspI CCGG 6 cut(s) 186, 296, 335, 750, 932, 1685
MspR9I CCNGG 7 cut(s) 335, 607, 933, 1485, 1542, 1686, 1999
MvaI CCWGG 4 cut(s) 607, 1485, 1542, 1999
MwoI GCNNNNNNNGC 7 cut(s) 305, 599, 1082, 1169, 1460, 1619, 1721
NciI CCSGG 3 cut(s) 335, 933, 1686
NdeI CATATG 3 cut(s) 867, 1414, 1475
NdeII GATC 6 cut(s) 277, 400, 746, 907, 1362, 1596
NlaIV GGNNCC 6 cut(s) 45, 279, 736, 748, 1292, 1630
NspI RCATGY 2 cut(s) 251, 1057
PaeR7I CTCGAG 2 cut(s) 315, 715
PagI TCATGA 3 cut(s) 100, 1146, 2044
PceI AGGCCT 1 cut(s) 1005
PciI ACATGT 2 cut(s) 247, 1053
PcsI WCGNNNNNNNCGW 1 cut(s) 946
PdmI GAANNNNTTC 2 cut(s) 618, 632
PfeI GAWTC 9 cut(s) 515, 526, 691, 780, 888, 988, 1140, 1832, 2071
PflMI CCANNNNNTGG 1 cut(s) 1300
PfoI TCCNGGA 3 cut(s) 931, 1540, 1684
PkrI GCNGC 3 cut(s) 1108, 1472, 2167
PleI GAGTC 3 cut(s) 105, 707, 1093
PmaCI CACGTG 1 cut(s) 1625
PmlI CACGTG 1 cut(s) 1625
PpsI GAGTC 3 cut(s) 105, 707, 1093
Ppu21I YACGTR 2 cut(s) 389, 1625
PpuMI RGGWCCY 2 cut(s) 43, 1538
PscI ACATGT 2 cut(s) 247, 1053
PshBI ATTAAT 1 cut(s) 1503
Psp124BI GAGCTC 1 cut(s) 418
Psp1406I AACGTT 1 cut(s) 1815
Psp5II RGGWCCY 2 cut(s) 43, 1538
Psp6I CCWGG 4 cut(s) 605, 1483, 1540, 1997
PspCI CACGTG 1 cut(s) 1625
PspFI CCCAGC 1 cut(s) 1450
PspGI CCWGG 4 cut(s) 605, 1483, 1540, 1997
PspN4I GGNNCC 6 cut(s) 45, 279, 736, 748, 1292, 1630
PspPI GGNCC 7 cut(s) 43, 332, 668, 1272, 1448, 1538, 1682
PspPPI RGGWCCY 2 cut(s) 43, 1538
PspXI VCTCGAGB 2 cut(s) 315, 715
PsuI RGATCY 4 cut(s) 277, 400, 746, 907
RsaI GTAC 7 cut(s) 234, 391, 736, 1058, 1342, 1428, 1699
RsaNI GTAC 7 cut(s) 233, 390, 735, 1057, 1341, 1427, 1698
SacI GAGCTC 1 cut(s) 418
SatI GCNGC 3 cut(s) 1107, 1471, 2166
Sau3AI GATC 6 cut(s) 277, 400, 746, 907, 1362, 1596
Sau96I GGNCC 7 cut(s) 43, 332, 668, 1272, 1448, 1538, 1682
SchI GAGTC 3 cut(s) 106, 707, 1093
ScrFI CCNGG 7 cut(s) 335, 607, 933, 1485, 1542, 1686, 1999
SduI GDGCHC 3 cut(s) 328, 418, 2044
SfaNI GCATC 4 cut(s) 611, 661, 1609, 1969
SfcI CTRYAG 2 cut(s) 1974, 2142
Sfr274I CTCGAG 2 cut(s) 315, 715
SinI GGWCC 3 cut(s) 43, 1538, 1682
SlaI CTCGAG 2 cut(s) 315, 715
SmlI CTYRAG 3 cut(s) 315, 715, 1101
SmoI CTYRAG 3 cut(s) 315, 715, 1101
SnaBI TACGTA 1 cut(s) 389
SseBI AGGCCT 1 cut(s) 1005
SsiI CCGC 5 cut(s) 81, 650, 860, 1463, 2165
SspI AATATT 1 cut(s) 136
SspMI CTAG 2 cut(s) 1013, 1286
SstI GAGCTC 1 cut(s) 418
StuI AGGCCT 1 cut(s) 1005
StyD4I CCNGG 7 cut(s) 333, 605, 931, 1483, 1540, 1684, 1997
StyI CCWWGG 5 cut(s) 17, 28, 658, 742, 1038
TaaI ACNGT 2 cut(s) 899, 1824
TaiI ACGT 6 cut(s) 124, 391, 1221, 1326, 1627, 1818
TaqI TCGA 7 cut(s) 93, 316, 622, 716, 986, 1365, 1439
TaqII GACCGA 1 cut(s) 271
TatI WGTACW 2 cut(s) 1056, 1426
TauI GCSGC 1 cut(s) 2168
TfiI GAWTC 9 cut(s) 515, 526, 691, 780, 888, 988, 1140, 1832, 2071
TscAI CASTG 2 cut(s) 371, 692
TseI GCWGC 2 cut(s) 1106, 1470
TspRI CASTG 2 cut(s) 371, 692
Van91I CCANNNNNTGG 1 cut(s) 1300
VpaK11BI GGWCC 3 cut(s) 43, 1538, 1682
VspI ATTAAT 1 cut(s) 1503
XagI CCTNNNNNAGG 1 cut(s) 933
XapI RAATTY 4 cut(s) 190, 217, 2065, 2195
XceI RCATGY 2 cut(s) 251, 1057
XcmI CCANNNNNNNNNTGG 2 cut(s) 495, 1846
XhoI CTCGAG 2 cut(s) 315, 715
XmiI GTMKAC 1 cut(s) 374
XmnI GAANNNNTTC 2 cut(s) 618, 632
XspI CTAG 2 cut(s) 1013, 1286
ZraI GACGTC 1 cut(s) 1324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.