RLG00000000344

Photosystem I P700 chlorophyll a apoprotein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
664754 .. 667847
3094 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000344

Sequence Viewer

Length: 3006 bp
ATGATTATTCGTTCGCCGGAACCAGAAGTTAAAATTTTGGTAGATAGGGATCCCGTAAAAACTTCTTTCGAGGAATGGGCCAGACCCGGTCATTTCTCAAGAACAATAGCTAAGGGGCCTGATACTACCACTTGGATCTGGAACCTACACGCTGATGCTCACGATTTCGATAGCCATACCAGTGATTTGGAGGAGATCTCTCGAAAAGTATTTAGTGCCCATTTTGGTCAACTCTCCATCATCTTTCTTTGGCTGAGTGGTATGTATTTCCACGGTGCTCGTTTTTCCAATTATGAAGCATGGCTAAGTGATCCTACTCACATTGGACCTAGTGCCCAGGTGGTTTGGCCAATAGTGGGTCAAGAAATATTGAATGGTGATGTAGGCGGGGGTTTCCGAGGAATACAAATAACCTCTGGGTTTTTTCAGCTTTGGCGAGCATCTGGAATAACTAATGAATTACAACTCTATTGTACTGCAATTGGTGCATTGGTCTTTGCTGCCTTAATGCTTTTTGCGGGTTGGTTCCATTATCACAAAGCTGCTCCGAAATTGGCTTGGTTCCAAGATGTAGAATCTATGTTGAATCACCATTTAGCAGGGCTATTAGGCCTTGGGTCTCTTGGTTGGGCGGGGCATCAAGTACACGTATCGTTACCAATTAACCAATTTCTAAACGCTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTATCTTGAATCGGGATCTTTTGGCTCAACTTTATCCCAGTTTTGCTGAGGGAGCGACCCCATTTTTCACCTTGAATTGGTCAAAATATGCGGAATTTCTTACTTTTCGTGGAGGATTAGATCCAGTAACTGGAGGTCTATGGCTGACCGATATTGCACACCATCATTTAGCTATTGCAATTCTTTTCCTGGTAGCGGGTCACATGTATAAGACCAATTGGGGCATTGGTCATGGTATAAAAGATATTTTAGAGGCTCATAAAGGCCCATTTACCGGCCAGGGCCATAAAGGCCTATATGAGATCCTAACAACGTCATGGCATGCTCAATTATCTCTTAACCTAGCTATGTTAGGATCTTTAACCATTATTGTAGCTCACCATATGTATGCGATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACACAACTTTCATTGTTCACACATCATATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGATACAACGATCTATTAGATCGTGTCCTTAGGCATCGCGATGCAATCATATCACATCTCAACTGGGTATGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAATGATACCATGAGCGCGTTAGGGCGTCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAGCCCGTCTTTGCTCAATGGATACAAAACACCCACGCTTTAGCACCCGGCGCAACGGCCCCTGGTGCAACAACAAGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGTGGCAGTGGGCGGTAAAGTTGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTGGTACATCACATTCATGCATTTACAATTCATGTGACGGTATTGATACTCCTGAAAGGCGTTCTATTTGCTCGTAGTTCGCGTTTGATACCCGATAAAGCAAATCTTGGTTTTCGTTTTCCTTGTGATGGACCCGGAAGGGGGGGGACATGCCAAGTATCCGCTTGGGATCATGTCTTCTTAGGGCTATTCTGGATGTATAATGCAATTTCGGTAGTAATATTCCATTTCAGTTGGAAAATGCAATCAGATGTTTGGGGTAGTATAAGTGATCAAGGGGTGGTAACTCATATCACGGGAGGAAACTTTGCGCAGAGTTCCATTACTATTAATGGGTGGCTCCGCGATTTCTTATGGGCACAGGCATCCCAAGTAATTCAGTCCTACGGTTCTTCATTATCTGCATATGGCCTTTTTTTCCTAGGCGCCCATTTTGTATGGGCTTTTAGTTTAATGTTTCTATTCAGCGGACGTGGTTATTGGCAAGAACTTATTGAATCCATTGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGTATTGTCCAAGGACGTGCTGAGGATTTGAAAGGCATTATGGCATTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAGGAACGTCTTTATCAGAATATTTTTGCTTCTCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAATCTGTTTCATGTAGCTTGGCAAGGAAATTTTGAGGCATGGGTACAGGATCCTTTACATGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCAGCTGTAGAGGCTTTTACTCGTGGAGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATTGGGTTACGTACTAATGAGGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTCTGCCATATCCTTAATAGCGGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCGTGGTTTAAAAATGCCGAATCTCGTCTCAACCACCATTTGTCAGGACTTTTCGGAGTAAGTTCCTTGGCTTGGACAGGACATTTAGTTCATGTCGCTATTCCTGGATCCAGGGGAGAAAACGTTCGGTGGAATAATTTCTTAGATGTATTGCCGCATCCCCAAGGATTAGGCCCACTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCGAGTAGTCATTTATTTGGTACCATCCCAAGGGGCAGGAACTGCCATTCTAACCCTTCTCGGAGGATTCCACCCACAAACGCAAAGTTTATGGCTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1002

Amino Acids

111.61

Weight (kDa)

6.75

Isoelectric Point (pI)

30.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PsaA_PsaB PF00223 32 - 725 0.0 Photosystem I psaA/psaB protein
PsaA_PsaB PF00223 738 - 968 6.3e-114 Photosystem I psaA/psaB protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 1212, 1905
Acc65I GGTACC 1 cut(s) 2924
AccB1I GGYRCC 2 cut(s) 2018, 2924
AccB7I CCANNNNNTGG 2 cut(s) 848, 2100
AccI GTMKAC 1 cut(s) 2564
AccII CGCG 4 cut(s) 1293, 1382, 1675, 1938
AccIII TCCGGA 1 cut(s) 2375
AclI AACGTT 1 cut(s) 2808
AcoI YGGCCR 2 cut(s) 347, 994
AcsI RAATTY 4 cut(s) 33, 716, 812, 2407
AcyI GRCGYC 2 cut(s) 1390, 2019
AfaI GTAC 7 cut(s) 475, 645, 1147, 1599, 2424, 2581, 2926
AflIII ACRYGT 3 cut(s) 646, 921, 2437
AgsI TTSAA 6 cut(s) 373, 586, 727, 793, 2090, 2182
AjiI CACGTC 2 cut(s) 2066, 2168
AjnI CCWGG 6 cut(s) 336, 906, 996, 1489, 2788, 2795
AloI GAACNNNNNNTCC 4 cut(s) 2757, 2789, 2793, 2825
Alw21I GWGCWC 3 cut(s) 280, 2518, 2608
Alw26I GTCTC 3 cut(s) 624, 1230, 2717
AlwNI CAGNNNCTG 2 cut(s) 848, 2946
Aor13HI TCCGGA 1 cut(s) 2375
ApeKI GCWGC 5 cut(s) 500, 542, 1205, 1208, 1217
ApoI RAATTY 4 cut(s) 33, 716, 812, 2407
AseI ATTAAT 1 cut(s) 1923
Asp700I GAANNNNTTC 2 cut(s) 2808, 2822
Asp718I GGTACC 1 cut(s) 2924
AspA2I CCTAGG 1 cut(s) 2014
AspLEI GCGC 5 cut(s) 1213, 1382, 1481, 1906, 2021
AsuC2I CCSGG 3 cut(s) 87, 1476, 1728
AsuHPI GGTGA 5 cut(s) 389, 581, 778, 1088, 1541
AvaII GGWCC 3 cut(s) 326, 1724, 2233
AvrII CCTAGG 1 cut(s) 2014
AxyI CCTNAGG 1 cut(s) 1283
BaeGI GKGCMC 3 cut(s) 220, 337, 1954
BalI TGGCCA 1 cut(s) 349
BamHI GGATCC 4 cut(s) 49, 2428, 2467, 2792
BanI GGYRCC 2 cut(s) 2018, 2924
BanII GRGCYC 2 cut(s) 2107, 2608
BauI CACGAG 1 cut(s) 2505
BbsI GAAGAC 1 cut(s) 1762
Bbv12I GWGCWC 3 cut(s) 280, 2518, 2608
BbvCI CCTCAGC 2 cut(s) 765, 2172
BbvI GCAGC 5 cut(s) 487, 529, 1192, 1195, 1229
BccI CCATC 4 cut(s) 245, 888, 1715, 2936
BceAI ACGGC 1 cut(s) 1500
BciT130I CCWGG 6 cut(s) 338, 908, 998, 1491, 2790, 2797
BciVI GTATCC 2 cut(s) 1443, 1762
BclI TGATCA 1 cut(s) 1864
BcnI CCSGG 3 cut(s) 87, 1476, 1728
BcoDI GTCTC 3 cut(s) 624, 1230, 2717
BfaI CTAG 5 cut(s) 330, 1061, 1130, 2015, 2142
BfmI CTRYAG 1 cut(s) 2490
BfoI RGCGCY 1 cut(s) 2022
BfuI GTATCC 2 cut(s) 1443, 1762
BglI GCCNNNNNGGC 1 cut(s) 1008
BglII AGATCT 1 cut(s) 195
BisI GCNGC 6 cut(s) 501, 543, 1206, 1209, 1218, 2840
BlnI CCTAGG 1 cut(s) 2014
BlpI GCTNAGC 1 cut(s) 2224
BlsI GCNGC 6 cut(s) 502, 544, 1207, 1210, 1219, 2841
Bme1390I CCNGG 9 cut(s) 87, 338, 908, 998, 1476, 1491, 1728, 2790, 2797
Bme18I GGWCC 3 cut(s) 326, 1724, 2233
BmgBI CACGTC 2 cut(s) 2066, 2168
BmrFI CCNGG 9 cut(s) 87, 338, 908, 998, 1476, 1491, 1728, 2790, 2797
BmrI ACTGGG 3 cut(s) 750, 1327, 2519
BmsI GCATC 8 cut(s) 145, 449, 646, 1101, 1285, 1297, 1967, 2851
BmuI ACTGGG 3 cut(s) 750, 1327, 2519
BpiI GAAGAC 1 cut(s) 1762
BplI GAGNNNNNCTC 2 cut(s) 182, 214
BpmI CTGGAG 3 cut(s) 702, 870, 2622
Bpu10I CCTNAGC 4 cut(s) 111, 765, 2172, 2229
Bpu1102I GCTNAGC 1 cut(s) 2224
BpuEI CTTGAG 2 cut(s) 82, 2170
BpuMI CCSGG 3 cut(s) 87, 1476, 1728
BsaAI YACGTR 2 cut(s) 649, 2579
BsaBI GATNNNNATC 1 cut(s) 48
BsaHI GRCGYC 2 cut(s) 1390, 2019
BsaI GGTCTC 1 cut(s) 624
BsaWI WCCGGW 1 cut(s) 2375
BsaXI ACNNNNNCTCC 2 cut(s) 2793, 2823
Bse118I RCCGGY 1 cut(s) 992
Bse1I ACTGG 8 cut(s) 180, 756, 842, 853, 1322, 1509, 2525, 2605
Bse21I CCTNAGG 1 cut(s) 1283
Bse8I GATNNNNATC 1 cut(s) 48
BseAI TCCGGA 1 cut(s) 2375
BseBI CCWGG 6 cut(s) 338, 908, 998, 1491, 2790, 2797
BseGI GGATG 4 cut(s) 1794, 1958, 2842, 2928
BseJI GATNNNNATC 1 cut(s) 48
BseMII CTCAG 6 cut(s) 245, 756, 2150, 2163, 2243, 2295
BseNI ACTGG 8 cut(s) 180, 756, 842, 853, 1322, 1509, 2525, 2605
BseRI GAGGAG 1 cut(s) 206
BseSI GKGCMC 3 cut(s) 220, 337, 1954
BseXI GCAGC 5 cut(s) 487, 529, 1192, 1195, 1229
Bsh1236I CGCG 4 cut(s) 1293, 1382, 1675, 1938
BshNI GGYRCC 2 cut(s) 2018, 2924
BsiHKAI GWGCWC 3 cut(s) 280, 2518, 2608
BsiSI CCGG 6 cut(s) 17, 87, 993, 1476, 1728, 2376
BslFI GGGAC 2 cut(s) 1377, 1753
BsmAI GTCTC 3 cut(s) 624, 1230, 2717
BsmBI CGTCTC 1 cut(s) 2717
BsmFI GGGAC 2 cut(s) 1377, 1753
Bso31I GGTCTC 1 cut(s) 624
Bsp1286I GDGCHC 7 cut(s) 220, 280, 337, 1954, 2107, 2518, 2608
Bsp13I TCCGGA 1 cut(s) 2375
Bsp1720I GCTNAGC 1 cut(s) 2224
Bsp68I TCGCGA 1 cut(s) 1293
BspCNI CTCAG 6 cut(s) 246, 757, 2149, 2164, 2242, 2296
BspEI TCCGGA 1 cut(s) 2375
BspFNI CGCG 4 cut(s) 1293, 1382, 1675, 1938
BspHI TCATGA 2 cut(s) 712, 2290
BspT107I GGYRCC 2 cut(s) 2018, 2924
BspTNI GGTCTC 1 cut(s) 624
BsrFI RCCGGY 1 cut(s) 992
BsrI ACTGG 8 cut(s) 180, 756, 842, 853, 1322, 1509, 2525, 2605
BssAI RCCGGY 1 cut(s) 992
BssNAI GTATAC 1 cut(s) 2565
BssNI GRCGYC 2 cut(s) 1390, 2019
BssSI CACGAG 1 cut(s) 2505
BssT1I CCWWGG 8 cut(s) 613, 2014, 2161, 2207, 2218, 2751, 2848, 2933
Bst1107I GTATAC 1 cut(s) 2565
Bst2BI CACGAG 1 cut(s) 2505
Bst2UI CCWGG 6 cut(s) 338, 908, 998, 1491, 2790, 2797
Bst4CI ACNGT 4 cut(s) 275, 1346, 1633, 1982
BstACI GRCGYC 2 cut(s) 1390, 2019
BstAPI GCANNNNNTGC 2 cut(s) 485, 2946
BstBAI YACGTR 2 cut(s) 649, 2579
BstC8I GCNNGC 3 cut(s) 438, 1041, 1215
BstDSI CCRYGG 1 cut(s) 271
BstF5I GGATG 4 cut(s) 1794, 1958, 2842, 2928
BstFNI CGCG 4 cut(s) 1293, 1382, 1675, 1938
BstH2I RGCGCY 1 cut(s) 2022
BstHHI GCGC 5 cut(s) 1213, 1382, 1481, 1906, 2021
BstMAI GTCTC 3 cut(s) 624, 1230, 2717
BstMWI GCNNNNNNNGC 9 cut(s) 485, 770, 1008, 1214, 1217, 1478, 1493, 2495, 2946
BstNI CCWGG 6 cut(s) 338, 908, 998, 1491, 2790, 2797
BstNSI RCATGY 5 cut(s) 925, 1043, 1217, 1746, 2441
BstSCI CCNGG 9 cut(s) 85, 336, 906, 996, 1474, 1489, 1726, 2788, 2795
BstSFI CTRYAG 1 cut(s) 2490
BstSLI GKGCMC 3 cut(s) 220, 337, 1954
BstSNI TACGTA 1 cut(s) 2579
BstUI CGCG 4 cut(s) 1293, 1382, 1675, 1938
BstV1I GCAGC 5 cut(s) 487, 529, 1192, 1195, 1229
BstV2I GAAGAC 1 cut(s) 1762
BstXI CCANNNNNNTGG 2 cut(s) 187, 1228
BstZ17I GTATAC 1 cut(s) 2565
Bsu36I CCTNAGG 1 cut(s) 1283
BsuI GTATCC 2 cut(s) 1443, 1762
BtgI CCRYGG 1 cut(s) 271
BtgZI GCGATG 3 cut(s) 1124, 1274, 1308
BtrI CACGTC 2 cut(s) 2066, 2168
BtsCI GGATG 4 cut(s) 1794, 1958, 2842, 2928
BtsI GCAGTG 1 cut(s) 1548
BtsIMutI CAGTG 5 cut(s) 187, 1548, 2532, 2561, 2882
BtuMI TCGCGA 1 cut(s) 1293
Cac8I GCNNGC 3 cut(s) 438, 1041, 1215
CaiI CAGNNNCTG 2 cut(s) 848, 2946
CciI TCATGA 2 cut(s) 712, 2290
CfoI GCGC 5 cut(s) 1213, 1382, 1481, 1906, 2021
Cfr10I RCCGGY 1 cut(s) 992
CseI GACGC 1 cut(s) 1379
Csp6I GTAC 7 cut(s) 474, 644, 1146, 1598, 2423, 2580, 2925
CviQI GTAC 7 cut(s) 474, 644, 1146, 1598, 2423, 2580, 2925
DinI GGCGCC 1 cut(s) 2020
DraI TTTAAA 1 cut(s) 2695
EaeI YGGCCR 2 cut(s) 347, 994
Ecl136II GAGCTC 1 cut(s) 2606
Eco105I TACGTA 1 cut(s) 2579
Eco130I CCWWGG 8 cut(s) 613, 2014, 2161, 2207, 2218, 2751, 2848, 2933
Eco147I AGGCCT 2 cut(s) 612, 1011
Eco24I GRGCYC 2 cut(s) 2107, 2608
Eco31I GGTCTC 1 cut(s) 624
Eco47I GGWCC 3 cut(s) 326, 1724, 2233
Eco53kI GAGCTC 1 cut(s) 2606
Eco81I CCTNAGG 1 cut(s) 1283
EcoICRI GAGCTC 1 cut(s) 2606
EcoO109I RGGNCCY 2 cut(s) 116, 2233
EcoRII CCWGG 6 cut(s) 336, 906, 996, 1489, 2788, 2795
EcoT14I CCWWGG 8 cut(s) 613, 2014, 2161, 2207, 2218, 2751, 2848, 2933
EcoT22I ATGCAT 1 cut(s) 1615
EcoT38I GRGCYC 2 cut(s) 2107, 2608
EgeI GGCGCC 1 cut(s) 2020
EheI GGCGCC 1 cut(s) 2020
ErhI CCWWGG 8 cut(s) 613, 2014, 2161, 2207, 2218, 2751, 2848, 2933
Esp3I CGTCTC 1 cut(s) 2717
FalI AAGNNNNNCTT 2 cut(s) 1683, 1715
FaqI GGGAC 2 cut(s) 1377, 1753
FauI CCCGC 5 cut(s) 380, 511, 625, 907, 2638
FauNDI CATATG 3 cut(s) 1101, 1173, 1999
FbaI TGATCA 1 cut(s) 1864
FblI GTMKAC 1 cut(s) 2564
Fnu4HI GCNGC 6 cut(s) 501, 543, 1206, 1209, 1218, 2840
FokI GGATG 4 cut(s) 1801, 1945, 2829, 2915
FriOI GRGCYC 2 cut(s) 2107, 2608
Fsp4HI GCNGC 6 cut(s) 501, 543, 1206, 1209, 1218, 2840
FspBI CTAG 5 cut(s) 330, 1061, 1130, 2015, 2142
FspI TGCGCA 2 cut(s) 1212, 1905
GlaI GCGC 5 cut(s) 1212, 1381, 1480, 1905, 2020
GluI GCNGC 6 cut(s) 501, 543, 1206, 1209, 1218, 2840
GsuI CTGGAG 3 cut(s) 702, 870, 2622
HaeII RGCGCY 1 cut(s) 2022
HapII CCGG 6 cut(s) 17, 87, 993, 1476, 1728, 2376
HgaI GACGC 1 cut(s) 1379
HhaI GCGC 5 cut(s) 1213, 1382, 1481, 1906, 2021
Hin1I GRCGYC 2 cut(s) 1390, 2019
Hin6I GCGC 5 cut(s) 1211, 1380, 1479, 1904, 2019
HinP1I GCGC 5 cut(s) 1211, 1380, 1479, 1904, 2019
HincII GTYRAC 2 cut(s) 230, 2483
HindII GTYRAC 2 cut(s) 230, 2483
HpaII CCGG 6 cut(s) 17, 87, 993, 1476, 1728, 2376
HphI GGTGA 5 cut(s) 389, 581, 778, 1088, 1541
Hpy166II GTNNAC 7 cut(s) 230, 646, 1148, 1164, 2370, 2483, 2565
Hpy188I TCNGA 7 cut(s) 398, 549, 1411, 1843, 2322, 2741, 2967
Hpy8I GTNNAC 7 cut(s) 230, 646, 1148, 1164, 2370, 2483, 2565
Hpy99I CGWCG 1 cut(s) 2250
HpyAV CCTTC 2 cut(s) 1725, 2970
HpyCH4III ACNGT 4 cut(s) 275, 1346, 1633, 1982
HpyCH4IV ACGT 7 cut(s) 648, 1031, 2065, 2167, 2311, 2578, 2808
HpyF10VI GCNNNNNNNGC 9 cut(s) 485, 770, 1008, 1214, 1217, 1478, 1493, 2495, 2946
HpySE526I ACGT 7 cut(s) 648, 1031, 2065, 2167, 2311, 2578, 2808
Hsp92I GRCGYC 2 cut(s) 1390, 2019
HspAI GCGC 5 cut(s) 1211, 1380, 1479, 1904, 2019
KasI GGCGCC 1 cut(s) 2018
Kpn2I TCCGGA 1 cut(s) 2375
KpnI GGTACC 1 cut(s) 2928
Ksp22I TGATCA 1 cut(s) 1864
LmnI GCTCC 5 cut(s) 550, 770, 1938, 2131, 2603
Lsp1109I GCAGC 5 cut(s) 487, 529, 1192, 1195, 1229
LweI GCATC 8 cut(s) 145, 449, 646, 1101, 1285, 1297, 1967, 2851
MaeI CTAG 5 cut(s) 330, 1061, 1130, 2015, 2142
MaeII ACGT 7 cut(s) 648, 1031, 2065, 2167, 2311, 2578, 2808
MaeIII GTNAC 8 cut(s) 654, 844, 917, 1563, 1627, 1876, 2574, 2652
MboII GAAGA 2 cut(s) 1762, 1977
MfeI CAATTG 3 cut(s) 480, 934, 2568
MhlI GDGCHC 7 cut(s) 220, 280, 337, 1954, 2107, 2518, 2608
MlsI TGGCCA 1 cut(s) 349
MluNI TGGCCA 1 cut(s) 349
Mly113I GGCGCC 1 cut(s) 2019
MlyI GAGTC 1 cut(s) 2296
MmeI TCCRAC 2 cut(s) 1271, 1808
Mox20I TGGCCA 1 cut(s) 349
Mph1103I ATGCAT 1 cut(s) 1615
MroI TCCGGA 1 cut(s) 2375
MroXI GAANNNNTTC 2 cut(s) 2808, 2822
MscI TGGCCA 1 cut(s) 349
MslI CAYNNNNRTG 6 cut(s) 153, 180, 1104, 1226, 1293, 1608
Msp20I TGGCCA 1 cut(s) 349
MspA1I CMGCKG 2 cut(s) 2061, 2489
MspI CCGG 6 cut(s) 17, 87, 993, 1476, 1728, 2376
MspR9I CCNGG 9 cut(s) 87, 338, 908, 998, 1476, 1491, 1728, 2790, 2797
MunI CAATTG 3 cut(s) 480, 934, 2568
MvaI CCWGG 6 cut(s) 338, 908, 998, 1491, 2790, 2797
MvnI CGCG 4 cut(s) 1293, 1382, 1675, 1938
MwoI GCNNNNNNNGC 9 cut(s) 485, 770, 1008, 1214, 1217, 1478, 1493, 2495, 2946
NarI GGCGCC 1 cut(s) 2019
NciI CCSGG 3 cut(s) 87, 1476, 1728
NdeI CATATG 3 cut(s) 1101, 1173, 1999
NmuCI GTSAC 2 cut(s) 917, 1627
NruI TCGCGA 1 cut(s) 1293
NsbI TGCGCA 2 cut(s) 1212, 1905
NsiI ATGCAT 1 cut(s) 1615
NspI RCATGY 5 cut(s) 925, 1043, 1217, 1746, 2441
PaeI GCATGC 2 cut(s) 1043, 1217
PagI TCATGA 2 cut(s) 712, 2290
PceI AGGCCT 2 cut(s) 612, 1011
PciI ACATGT 2 cut(s) 921, 2437
PcsI WCGNNNNNNNCGW 1 cut(s) 1672
PdmI GAANNNNTTC 2 cut(s) 2808, 2822
PfeI GAWTC 9 cut(s) 575, 586, 700, 727, 2090, 2705, 2881, 2903, 2971
PflFI GACNNNGTC 1 cut(s) 87
PflMI CCANNNNNTGG 2 cut(s) 848, 2100
PfoI TCCNGGA 1 cut(s) 2788
PkrI GCNGC 6 cut(s) 502, 544, 1207, 1210, 1219, 2841
PleI GAGTC 1 cut(s) 2295
PluTI GGCGCC 1 cut(s) 2022
PpsI GAGTC 1 cut(s) 2295
Ppu21I YACGTR 2 cut(s) 649, 2579
PpuMI RGGWCCY 1 cut(s) 2233
PscI ACATGT 2 cut(s) 921, 2437
PshBI ATTAAT 1 cut(s) 1923
Psp124BI GAGCTC 1 cut(s) 2608
Psp1406I AACGTT 1 cut(s) 2808
Psp5II RGGWCCY 1 cut(s) 2233
Psp6I CCWGG 6 cut(s) 336, 906, 996, 1489, 2788, 2795
PspGI CCWGG 6 cut(s) 336, 906, 996, 1489, 2788, 2795
PspPPI RGGWCCY 1 cut(s) 2233
PstNI CAGNNNCTG 2 cut(s) 848, 2946
PsyI GACNNNGTC 1 cut(s) 87
PvuII CAGCTG 1 cut(s) 2489
RruI TCGCGA 1 cut(s) 1293
RsaI GTAC 7 cut(s) 475, 645, 1147, 1599, 2424, 2581, 2926
RsaNI GTAC 7 cut(s) 474, 644, 1146, 1598, 2423, 2580, 2925
RseI CAYNNNNRTG 6 cut(s) 153, 180, 1104, 1226, 1293, 1608
SacI GAGCTC 1 cut(s) 2608
SatI GCNGC 6 cut(s) 501, 543, 1206, 1209, 1218, 2840
SchI GAGTC 1 cut(s) 2296
ScrFI CCNGG 9 cut(s) 87, 338, 908, 998, 1476, 1491, 1728, 2790, 2797
SduI GDGCHC 7 cut(s) 220, 280, 337, 1954, 2107, 2518, 2608
SfaNI GCATC 8 cut(s) 145, 449, 646, 1101, 1285, 1297, 1967, 2851
SfcI CTRYAG 1 cut(s) 2490
SfiI GGCCNNNNNGGCC 1 cut(s) 1008
SfoI GGCGCC 1 cut(s) 2020
SinI GGWCC 3 cut(s) 326, 1724, 2233
SmiMI CAYNNNNRTG 6 cut(s) 153, 180, 1104, 1226, 1293, 1608
SmlI CTYRAG 2 cut(s) 97, 2149
SmoI CTYRAG 2 cut(s) 97, 2149
SnaBI TACGTA 1 cut(s) 2579
SphI GCATGC 2 cut(s) 1043, 1217
SseBI AGGCCT 2 cut(s) 612, 1011
SspDI GGCGCC 1 cut(s) 2018
SspI AATATT 3 cut(s) 369, 1815, 2326
SspMI CTAG 5 cut(s) 330, 1061, 1130, 2015, 2142
SstI GAGCTC 1 cut(s) 2608
StuI AGGCCT 2 cut(s) 612, 1011
StyD4I CCNGG 9 cut(s) 85, 336, 906, 996, 1474, 1489, 1726, 2788, 2795
StyI CCWWGG 8 cut(s) 613, 2014, 2161, 2207, 2218, 2751, 2848, 2933
TaaI ACNGT 4 cut(s) 275, 1346, 1633, 1982
TaiI ACGT 7 cut(s) 651, 1034, 2068, 2170, 2314, 2581, 2811
TaqI TCGA 6 cut(s) 69, 168, 202, 1255, 2283, 2906
TaqII GACCGA 1 cut(s) 881
TatI WGTACW 2 cut(s) 473, 643
TauI GCSGC 1 cut(s) 2842
TfiI GAWTC 9 cut(s) 575, 586, 700, 727, 2090, 2705, 2881, 2903, 2971
TscAI CASTG 5 cut(s) 187, 1548, 2532, 2561, 2882
TseFI GTSAC 2 cut(s) 917, 1627
TseI GCWGC 5 cut(s) 500, 542, 1205, 1208, 1217
Tsp45I GTSAC 2 cut(s) 917, 1627
TspRI CASTG 5 cut(s) 187, 1548, 2532, 2561, 2882
Tth111I GACNNNGTC 1 cut(s) 87
Van91I CCANNNNNTGG 2 cut(s) 848, 2100
VpaK11BI GGWCC 3 cut(s) 326, 1724, 2233
VspI ATTAAT 1 cut(s) 1923
XapI RAATTY 4 cut(s) 33, 716, 812, 2407
XceI RCATGY 5 cut(s) 925, 1043, 1217, 1746, 2441
XmaJI CCTAGG 1 cut(s) 2014
XmiI GTMKAC 1 cut(s) 2564
XmnI GAANNNNTTC 2 cut(s) 2808, 2822
XspI CTAG 5 cut(s) 330, 1061, 1130, 2015, 2142
Zsp2I ATGCAT 1 cut(s) 1615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.