Gene Detail - RorugMtG0002100

RorugMtG0002100

PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin

Design Primers CRISPR Design

Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000009

Orthogroup ID

OG0008317

Physical Location & Seq

Genomic Coordinates Reverse (-)

125323 .. 125454

Gene Structure 132 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 22 bp

Sequence not available

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009941 GO:0010287 GO:0016020 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 map00195 map01100

Pfam Domains

Protein Families

PsaA_PsaB

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0008317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	ATCG00340
fragaria_vesca	FvH4_3g21080
malus_domestica	MD11G1068500.v1.1
pyrus_communis	pycom03g05250 pycom12401g00190
rosa_chinensis	RchiOBHm_Chr3g0491791 RchiOBHm_CPg0502261
rosa_laevigata	RLG00000000045 RLG00000000063 RLG00000000113 RLG00000000228 RLG00000000244 RLG00000000264 RLG00000000272 RLG00000000287 RLG00000000297 RLG00000000321 RLG00000000328 RLG00000000335 RLG00000000343 RLG00000000344
rosa_rugosa	RorugMtG0002100.1
rosa_samantha	Rh4AG120200

Restriction Enzyme Sites

1 / 10

No common restriction sites found or sequence not available.