Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0009084

Physical Location & Seq

Genomic Coordinates Forward (+)

1464321 .. 1467496

Gene Structure 3176 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g02620.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGACGATTAAGCCGGCGGTTCGAGTTTCCGACGGGAAGCTGATCGTGAACAACCGGACGATTCTGACCGGAGTACCAGACAATGTCACCGTCACGTCCGGCTCCGCGTCCGGCCCGGCCGACGGAGTCTTCCTCGGCGCGGCGTTTGACGTCAGCGACAGCCGGCACGTGACGTCACTCGGGGCATTACAGACCGGCGTGCGTTTCATGGCGTGCTTCCGGTTCAAGCTGTGGTGGATGGCCCAGAAAATGGGCGAGTCCGGCGCCGACGTCCCGCTCGAGACTCAGTTCCTATTGGTCGAGACCAACTCGTCCGGGTCCCACCTCGAGGAGGAGATCGTCTACGCTGTGTTCCTCCCTCTTATCGAAGGCCCCTTCAGAGCCAGCCTACAGGGGAACAACAGTAGAGACGAGCTGGAGCTTTGTTTGGAGAGCGGTGACGTGGACACCGAAGCGGCGTCGTTTTCGCACTCGGTGTTCGTCCACGCCGGGACCGACCCTTTCGCGACGATAACGGAGGCGGTCCGGGCCGTTAAGTCTCACCTGAAGACGTTTCGTCAACGTCACGAGAAGAAGCTCCCCGGAATCGTTGACTACTTCGGGTGGTGCACGTGGGACGCGTTTTACCAGGACGTGACTCAGGAAGGAGTCGAGGCCGGTTTAAAGTCGTTAACCGACGGCGGGGCGCCGCCGAAGTTCGTCATCATCGACGACGGCTGGCAGTCAGTCGCCGGAGATGAAAACAAAGCCGGCGAGCTGCAGAGGCTGACCGGAATCAAAGAGAATCCGAAGTTTCAAAACAAGGAGGATGGGATCAAGAACATAGTCAACATAGCAAAGGATACATACGGTTTGAAATACGTGTACGTATGGCACGCCATCACTGGCTACTGGGGCGGGGTCCGACCCGGGGAGGAATACGGGTCGGCTCTGAAGTACCCGGATATATCGAAGGGACTCTTGGAGAACGACCCGTCGTGGAAAACGGACGTGATGCGGTTACAAGGTCTGGGGTTGGTAAACCCGAGACACGTGTACAAGTTTTACAACGAGCTACACAGCTACTTGGCGTCTGCGGGTGTAGATGGGGTTAAGGTGGACGTGCAGTGCGTGCTGGAGACGCTCGGAGCCGGGCTGGGCGGGCGGGTTGAGCTGACCCGGTTGTACCACCAAGCTCTTGATGCCTCGGTGGCGAGGAACTTTGAAGACAATGGGATCATAGCGTGCATGAGCCATAATACTGATGCGTTGTACTGCGCGAAAAACACGGCGGTGGTTAGAGCCTCCGACGATTTCTACCCCCGCGATCCGGTGTCGCATACGATCCACGTGGCGGCGGTGGCGTATAATAGCGTTTTCCTCGGCGAGTTTATGCTGCCGGATTGGGATATGTTCCACTCGCTTCATCCGGCGGCTGAGTACCACGCGTCGGCCAGAGCCATCAGTGGTGGACCTGTTTATGTTAGTGATGCGCCTGGGAAGCATGACTTTGAGCTGTTGAAGAAGATAGTATTGCCAGACGGGTCGGTGCTCCGGGCCCGGTTACCAGGAAGGCCGACCCGGGACTGCTTGTTCACTGACCCGGCCCGGGATGGGTTGAGTCTGTTGAAGATATGGAACATGAATAAGTACACAGGTGTGGTTGGAGTGTACAACTGCCAAGGTGCAGCATGGAGCTCACTGGAGAAGAAGAATGCGTTTCACGAGACGAAATCGGAGGCCATTACCGGTTATGTTCGCGGCCGTGATGTTCACCTGATTAGAGAGGCTGCCACTGATCCCGATTGGAATGGTGACTGCGTCGCGTACTGCAATCGGACAGGGGAGGTTGTGACATTGCCTCACAATGCTGCTATGCCCATCTCCCTCAAGGTGCTTGAACACGAGATTTTCACCGTCAGTCCCATGAAGGTTTTGGCGCCGGGGGTGAGTTTTGCTCCTTTGGGACTGGTTAACATGTACAATGCCGGTGGAGCCATTGAAGAGTTGAGATATGAGGAGAGACTAGTCTCCATGGAGGTTAGAGGGTGTGGCAAGTTCGGTGTGTATTCTTCAAACAAGCCCAGCAGGTGCTCTGTTGAGAGTAATGAGGTTGGTTTCAGCTACGATTCGGCATCTGGGTTGGTGTCTTTGTGCTTGGATCATATGCCTGAAGAGGGAAAAAGAGTACAACTAGTCGAGGTTGAGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00052 map00052

Pfam Domains

Protein Families

Raffinose_syn

Protein Analysis

731

Amino Acids

79.97

Weight (kDa)

5.54

Isoelectric Point (pI)

31.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Raffinose_syn	PF05691	7 - 711	0.0	Raffinose synthase or seed imbibition protein Sip1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20250 AT5G20250 AT5G20250 AT5G20250
fragaria_vesca	FvH4_1g02620 FvH4_1g02620 FvH4_1g02620
malus_domestica	MD02G1025500.v1.1 MD02G1026200.v1.1
prunus_persica	Prupe.7G248600_v2.0.a1 Prupe.7G248600_v2.0.a1
pyrus_communis	pycom02g02160
rosa_chinensis	RchiOBHm_Chr2g0087631
rosa_laevigata	RLG00000015888
rosa_multiflora	Rmu_co8465603.1_g000001
rosa_rugosa	Rorug01G0477600 Rorug01G0477700
rosa_samantha	Rh2AG031200 Rh2BG030600 Rh2CG031000 Rh2DG030900
rosa_wichuraiana	Rw2G002450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2058
AasI	GACNNNNNNGTC	1 cut(s)	310
AatII	GACGTC	3 cut(s)	153, 176, 273
AbsI	CCTCGAGG	1 cut(s)	326
Acc36I	ACCTGC	1 cut(s)	2058
AccB1I	GGYRCC	3 cut(s)	263, 685, 1918
AccB7I	CCANNNNNTGG	1 cut(s)	250
AccBSI	CCGCTC	2 cut(s)	277, 435
AccI	GTMKAC	1 cut(s)	342
AccII	CGCG	9 cut(s)	107, 140, 506, 620, 1259, 1305, 1427, 1740, 1805
AclWI	GGATC	6 cut(s)	821, 1223, 1301, 1318, 1772, 2148
AcoI	YGGCCR	3 cut(s)	117, 1431, 1741
AcuI	CTGAAG	4 cut(s)	361, 566, 953, 2172
AcvI	CACGTG	4 cut(s)	169, 612, 1033, 1330
AcyI	GRCGYC	8 cut(s)	150, 173, 264, 270, 458, 686, 1070, 1919
AdeI	CACNNNGTG	1 cut(s)	475
AflIII	ACRYGT	6 cut(s)	618, 861, 1030, 1032, 1425, 1956
AgeI	ACCGGT	1 cut(s)	1727
AgsI	TTSAA	9 cut(s)	226, 797, 856, 1205, 1501, 1609, 1880, 1982, 2055
AhdI	GACNNNNNGTC	1 cut(s)	555
AhlI	ACTAGT	2 cut(s)	2005, 2173
AjiI	CACGTC	5 cut(s)	96, 442, 634, 991, 1102
AjnI	CCWGG	3 cut(s)	627, 1474, 1546
AjuI	GAANNNNNNNTTGG	2 cut(s)	944, 976
AleI	CACNNNNGTG	2 cut(s)	1271, 1637
AloI	GAACNNNNNNTCC	2 cut(s)	1556, 1588
Alw21I	GWGCWC	4 cut(s)	611, 1533, 1679, 2075
Alw26I	GTCTC	9 cut(s)	275, 296, 402, 543, 1021, 1112, 1700, 1996, 2014
Alw44I	GTGCAC	1 cut(s)	607
AlwI	GGATC	6 cut(s)	821, 1223, 1301, 1318, 1772, 2148
AlwNI	CAGNNNCTG	1 cut(s)	766
Ama87I	CYCGRG	7 cut(s)	179, 278, 326, 908, 1024, 1560, 1587
ApaI	GGGCCC	1 cut(s)	1540
ApaLI	GTGCAC	1 cut(s)	607
ApeKI	GCWGC	5 cut(s)	757, 1375, 1667, 1769, 1850
AsiGI	ACCGGT	1 cut(s)	1727
AspLEI	GCGC	6 cut(s)	140, 266, 688, 1259, 1474, 1921
AsuHPI	GGTGA	7 cut(s)	79, 449, 533, 1745, 1805, 1885, 1939
AvaI	CYCGRG	7 cut(s)	179, 278, 326, 908, 1024, 1560, 1587
AvaII	GGWCC	5 cut(s)	318, 492, 523, 901, 1451
BaeGI	GKGCMC	2 cut(s)	611, 1540
BaeI	ACNNNNGTAYC	2 cut(s)	57, 90
BanI	GGYRCC	3 cut(s)	263, 685, 1918
BanII	GRGCYC	2 cut(s)	1540, 1679
BauI	CACGAG	3 cut(s)	566, 1703, 1883
BbrPI	CACGTG	4 cut(s)	169, 612, 1033, 1330
BbsI	GAAGAC	3 cut(s)	121, 554, 1212
Bbv12I	GWGCWC	4 cut(s)	611, 1533, 1679, 2075
BbvI	GCAGC	5 cut(s)	744, 1362, 1679, 1756, 1837
BccI	CCATC	7 cut(s)	232, 803, 887, 1079, 1448, 1586, 1868
BceAI	ACGGC	5 cut(s)	515, 694, 730, 1284, 1728
BciT130I	CCWGG	3 cut(s)	629, 1476, 1548
BciVI	GTATCC	1 cut(s)	835
BcoDI	GTCTC	9 cut(s)	275, 296, 402, 543, 1021, 1112, 1700, 1996, 2014
BcuI	ACTAGT	2 cut(s)	2005, 2173
BfaI	CTAG	2 cut(s)	2006, 2174
BfmI	CTRYAG	3 cut(s)	389, 758, 2189
BfoI	RGCGCY	3 cut(s)	267, 689, 1922
BfuAI	ACCTGC	1 cut(s)	2058
BfuI	GTATCC	1 cut(s)	835
BglI	GCCNNNNNGGC	1 cut(s)	1190
Bme18I	GGWCC	5 cut(s)	318, 492, 523, 901, 1451
BmeRI	GACNNNNNGTC	1 cut(s)	555
BmeT110I	CYCGRG	7 cut(s)	179, 278, 326, 908, 1024, 1560, 1587
BmgBI	CACGTC	5 cut(s)	96, 442, 634, 991, 1102
BmrI	ACTGGG	1 cut(s)	901
BmsI	GCATC	5 cut(s)	984, 1171, 1234, 1459, 2123
BmuI	ACTGGG	1 cut(s)	901
BpiI	GAAGAC	3 cut(s)	121, 554, 1212
BplI	GAGNNNNNCTC	6 cut(s)	117, 149, 293, 325, 1921, 1953
BpmI	CTGGAG	3 cut(s)	437, 1136, 1703
BpuEI	CTTGAG	1 cut(s)	1853
BsaAI	YACGTR	6 cut(s)	169, 612, 862, 868, 1033, 1330
BsaHI	GRCGYC	8 cut(s)	150, 173, 264, 270, 458, 686, 1070, 1919
BsaI	GGTCTC	1 cut(s)	296
BsaWI	WCCGGW	6 cut(s)	54, 68, 219, 770, 1309, 1727
Bse118I	RCCGGY	7 cut(s)	13, 162, 194, 656, 749, 1727, 1967
Bse1I	ACTGG	4 cut(s)	889, 896, 1686, 1953
Bse3DI	GCAATG	1 cut(s)	1835
BseBI	CCWGG	3 cut(s)	629, 1476, 1548
BseGI	GGATG	4 cut(s)	243, 814, 1405, 1597
BseMI	GCAATG	1 cut(s)	1835
BseMII	CTCAG	3 cut(s)	299, 653, 1407
BseNI	ACTGG	4 cut(s)	889, 896, 1686, 1953
BseRI	GAGGAG	3 cut(s)	344, 347, 2012
BseSI	GKGCMC	2 cut(s)	611, 1540
BseX3I	CGGCCG	2 cut(s)	117, 1741
BseXI	GCAGC	5 cut(s)	744, 1362, 1679, 1756, 1837
BseYI	CCCAGC	2 cut(s)	1135, 2063
BsgI	GTGCAG	2 cut(s)	1124, 1686
Bsh1236I	CGCG	9 cut(s)	107, 140, 506, 620, 1259, 1305, 1427, 1740, 1805
Bsh1285I	CGRYCG	2 cut(s)	120, 1744
BshNI	GGYRCC	3 cut(s)	263, 685, 1918
BshTI	ACCGGT	1 cut(s)	1727
BsiEI	CGRYCG	2 cut(s)	120, 1744
BsiHKAI	GWGCWC	4 cut(s)	611, 1533, 1679, 2075
BsiHKCI	CYCGRG	7 cut(s)	179, 278, 326, 908, 1024, 1560, 1587
BslFI	GGGAC	8 cut(s)	257, 304, 505, 629, 969, 1577, 1887, 1959
BsmAI	GTCTC	9 cut(s)	275, 296, 402, 543, 1021, 1112, 1700, 1996, 2014
BsmBI	CGTCTC	3 cut(s)	402, 1112, 1700
BsmFI	GGGAC	8 cut(s)	257, 304, 505, 629, 969, 1577, 1887, 1959
BsmI	GAATGC	1 cut(s)	1699
Bso31I	GGTCTC	1 cut(s)	296
BsoBI	CYCGRG	7 cut(s)	179, 278, 326, 908, 1024, 1560, 1587
Bsp120I	GGGCCC	1 cut(s)	1536
Bsp1286I	GDGCHC	5 cut(s)	611, 1533, 1540, 1679, 2075
Bsp1407I	TGTACA	3 cut(s)	1035, 1650, 1959
Bsp143I	GATC	8 cut(s)	42, 336, 813, 1215, 1306, 1323, 1777, 2140
Bsp19I	CCATGG	1 cut(s)	2013
Bsp68I	TCGCGA	1 cut(s)	506
BspCNI	CTCAG	3 cut(s)	298, 652, 1408
BspFNI	CGCG	9 cut(s)	107, 140, 506, 620, 1259, 1305, 1427, 1740, 1805
BspMAI	CTGCAG	1 cut(s)	762
BspMI	ACCTGC	1 cut(s)	2058
BspPI	GGATC	6 cut(s)	821, 1223, 1301, 1318, 1772, 2148
BspT107I	GGYRCC	3 cut(s)	263, 685, 1918
BspTNI	GGTCTC	1 cut(s)	296
BsrBI	CCGCTC	2 cut(s)	277, 435
BsrDI	GCAATG	1 cut(s)	1835
BsrFI	RCCGGY	7 cut(s)	13, 162, 194, 656, 749, 1727, 1967
BsrGI	TGTACA	3 cut(s)	1035, 1650, 1959
BsrI	ACTGG	4 cut(s)	889, 896, 1686, 1953
BssAI	RCCGGY	7 cut(s)	13, 162, 194, 656, 749, 1727, 1967
BssMI	GATC	8 cut(s)	42, 336, 813, 1215, 1306, 1323, 1777, 2140
BssNI	GRCGYC	8 cut(s)	150, 173, 264, 270, 458, 686, 1070, 1919
BssSI	CACGAG	3 cut(s)	566, 1703, 1883
BssT1I	CCWWGG	2 cut(s)	1660, 2013
Bst2BI	CACGAG	3 cut(s)	566, 1703, 1883
Bst2UI	CCWGG	3 cut(s)	629, 1476, 1548
Bst4CI	ACNGT	4 cut(s)	91, 404, 851, 1897
Bst6I	CTCTTC	2 cut(s)	1977, 2148
BstACI	GRCGYC	8 cut(s)	150, 173, 264, 270, 458, 686, 1070, 1919
BstAPI	GCANNNNNTGC	1 cut(s)	1111
BstAUI	TGTACA	3 cut(s)	1035, 1650, 1959
BstBAI	YACGTR	6 cut(s)	169, 612, 862, 868, 1033, 1330
BstDEI	CTNAG	3 cut(s)	285, 639, 1416
BstDSI	CCRYGG	1 cut(s)	2013
BstEII	GGTNACC	1 cut(s)	1542
BstENI	CCTNNNNNAGG	1 cut(s)	329
BstF5I	GGATG	4 cut(s)	243, 814, 1405, 1597
BstFNI	CGCG	9 cut(s)	107, 140, 506, 620, 1259, 1305, 1427, 1740, 1805
BstH2I	RGCGCY	3 cut(s)	267, 689, 1922
BstHHI	GCGC	6 cut(s)	140, 266, 688, 1259, 1474, 1921
BstKTI	GATC	8 cut(s)	45, 339, 816, 1218, 1309, 1326, 1780, 2143
BstMAI	GTCTC	9 cut(s)	275, 296, 402, 543, 1021, 1112, 1700, 1996, 2014
BstMBI	GATC	8 cut(s)	42, 336, 813, 1215, 1306, 1323, 1777, 2140
BstMCI	CGRYCG	2 cut(s)	120, 1744
BstNI	CCWGG	3 cut(s)	629, 1476, 1548
BstNSI	RCATGY	1 cut(s)	1960
BstPI	GGTNACC	1 cut(s)	1542
BstSFI	CTRYAG	3 cut(s)	389, 758, 2189
BstSLI	GKGCMC	2 cut(s)	611, 1540
BstSNI	TACGTA	1 cut(s)	868
BstUI	CGCG	9 cut(s)	107, 140, 506, 620, 1259, 1305, 1427, 1740, 1805
BstV1I	GCAGC	5 cut(s)	744, 1362, 1679, 1756, 1837
BstV2I	GAAGAC	3 cut(s)	121, 554, 1212
BstZI	CGGCCG	2 cut(s)	117, 1741
BsuI	GTATCC	1 cut(s)	835
BtgI	CCRYGG	1 cut(s)	2013
BtrI	CACGTC	5 cut(s)	96, 442, 634, 991, 1102
BtsCI	GGATG	4 cut(s)	243, 814, 1405, 1597
BtsI	GCAGTG	1 cut(s)	1112
BtsIMutI	CAGTG	6 cut(s)	882, 1112, 1450, 1575, 1679, 1773
BtuMI	TCGCGA	1 cut(s)	506
BveI	ACCTGC	1 cut(s)	2058
CaiI	CAGNNNCTG	1 cut(s)	766
CfoI	GCGC	6 cut(s)	140, 266, 688, 1259, 1474, 1921
Cfr10I	RCCGGY	7 cut(s)	13, 162, 194, 656, 749, 1727, 1967
Cfr9I	CCCGGG	3 cut(s)	908, 1560, 1587
CpoI	CGGWCCG	1 cut(s)	523
CseI	GACGC	7 cut(s)	96, 447, 626, 1059, 1129, 1416, 1789
CspAI	ACCGGT	1 cut(s)	1727
CspCI	CAANNNNNGTGG	2 cut(s)	1951, 1986
CspI	CGGWCCG	1 cut(s)	523
CviAII	CATG	8 cut(s)	208, 1228, 1484, 1621, 1671, 1906, 1957, 2014
DdeI	CTNAG	3 cut(s)	285, 639, 1416
DinI	GGCGCC	3 cut(s)	265, 687, 1920
DpnI	GATC	8 cut(s)	44, 338, 815, 1217, 1308, 1325, 1779, 2142
DpnII	GATC	8 cut(s)	42, 336, 813, 1215, 1306, 1323, 1777, 2140
DraI	TTTAAA	1 cut(s)	663
DraIII	CACNNNGTG	1 cut(s)	475
DrdI	GACNNNNNNGTC	1 cut(s)	310
DriI	GACNNNNNGTC	1 cut(s)	555
DseDI	GACNNNNNNGTC	1 cut(s)	310
EaeI	YGGCCR	3 cut(s)	117, 1431, 1741
EagI	CGGCCG	2 cut(s)	117, 1741
Eam1104I	CTCTTC	2 cut(s)	1977, 2148
Eam1105I	GACNNNNNGTC	1 cut(s)	555
EarI	CTCTTC	2 cut(s)	1977, 2148
Ecl136II	GAGCTC	1 cut(s)	1677
EclXI	CGGCCG	2 cut(s)	117, 1741
Eco105I	TACGTA	1 cut(s)	868
Eco130I	CCWWGG	2 cut(s)	1660, 2013
Eco24I	GRGCYC	2 cut(s)	1540, 1679
Eco31I	GGTCTC	1 cut(s)	296
Eco47I	GGWCC	5 cut(s)	318, 492, 523, 901, 1451
Eco52I	CGGCCG	2 cut(s)	117, 1741
Eco53kI	GAGCTC	1 cut(s)	1677
Eco57I	CTGAAG	4 cut(s)	361, 566, 953, 2172
Eco72I	CACGTG	4 cut(s)	169, 612, 1033, 1330
Eco88I	CYCGRG	7 cut(s)	179, 278, 326, 908, 1024, 1560, 1587
Eco91I	GGTNACC	1 cut(s)	1542
EcoICRI	GAGCTC	1 cut(s)	1677
EcoNI	CCTNNNNNAGG	1 cut(s)	329
EcoO109I	RGGNCCY	2 cut(s)	318, 371
EcoO65I	GGTNACC	1 cut(s)	1542
EcoRII	CCWGG	3 cut(s)	627, 1474, 1546
EcoT14I	CCWWGG	2 cut(s)	1660, 2013
EcoT38I	GRGCYC	2 cut(s)	1540, 1679
EgeI	GGCGCC	3 cut(s)	265, 687, 1920
EheI	GGCGCC	3 cut(s)	265, 687, 1920
ErhI	CCWWGG	2 cut(s)	1660, 2013
Esp3I	CGTCTC	3 cut(s)	402, 1112, 1700
FaeI	CATG	8 cut(s)	211, 1231, 1487, 1624, 1674, 1909, 1960, 2017
FalI	AAGNNNNNCTT	4 cut(s)	944, 976, 1472, 1504
FaqI	GGGAC	8 cut(s)	257, 304, 505, 629, 969, 1577, 1887, 1959
FatI	CATG	8 cut(s)	207, 1227, 1483, 1620, 1670, 1905, 1956, 2013
FauI	CCCGC	7 cut(s)	282, 674, 890, 1069, 1133, 1137, 1310
FauNDI	CATATG	1 cut(s)	2145
FblI	GTMKAC	1 cut(s)	342
FokI	GGATG	4 cut(s)	250, 821, 1392, 1604
FriOI	GRGCYC	2 cut(s)	1540, 1679
FspBI	CTAG	2 cut(s)	2006, 2174
GlaI	GCGC	6 cut(s)	139, 265, 687, 1258, 1473, 1920
GsaI	CCCAGC	2 cut(s)	1139, 2067
GsuI	CTGGAG	3 cut(s)	437, 1136, 1703
HaeII	RGCGCY	3 cut(s)	267, 689, 1922
HgaI	GACGC	7 cut(s)	96, 447, 626, 1059, 1129, 1416, 1789
HhaI	GCGC	6 cut(s)	140, 266, 688, 1259, 1474, 1921
Hin1I	GRCGYC	8 cut(s)	150, 173, 264, 270, 458, 686, 1070, 1919
Hin1II	CATG	8 cut(s)	211, 1231, 1487, 1624, 1674, 1909, 1960, 2017
Hin6I	GCGC	6 cut(s)	138, 264, 686, 1257, 1472, 1919
HinP1I	GCGC	6 cut(s)	138, 264, 686, 1257, 1472, 1919
HincII	GTYRAC	5 cut(s)	560, 592, 672, 829, 1954
HindII	GTYRAC	5 cut(s)	560, 592, 672, 829, 1954
HpaI	GTTAAC	2 cut(s)	672, 1954
HphI	GGTGA	7 cut(s)	79, 449, 533, 1745, 1805, 1885, 1939
HpyAV	CCTTC	6 cut(s)	362, 385, 638, 946, 1545, 1903
HpyCH4III	ACNGT	4 cut(s)	91, 404, 851, 1897
HpyCH4V	TGCA	6 cut(s)	609, 760, 1105, 1227, 1667, 1812
HpyF3I	CTNAG	3 cut(s)	285, 639, 1416
Hsp92I	GRCGYC	8 cut(s)	150, 173, 264, 270, 458, 686, 1070, 1919
Hsp92II	CATG	8 cut(s)	211, 1231, 1487, 1624, 1674, 1909, 1960, 2017
HspAI	GCGC	6 cut(s)	138, 264, 686, 1257, 1472, 1919
KasI	GGCGCC	3 cut(s)	263, 685, 1918
KflI	GGGWCCC	1 cut(s)	318
KroI	GCCGGC	3 cut(s)	13, 162, 749
KroNI	GCCGGC	3 cut(s)	15, 164, 751
KspAI	GTTAAC	2 cut(s)	672, 1954
Kzo9I	GATC	8 cut(s)	42, 336, 813, 1215, 1306, 1323, 1777, 2140
LmnI	GCTCC	8 cut(s)	107, 418, 582, 1127, 1536, 1674, 1942, 1973
Lsp1109I	GCAGC	5 cut(s)	744, 1362, 1679, 1756, 1837
LweI	GCATC	5 cut(s)	984, 1171, 1234, 1459, 2123
MaeI	CTAG	2 cut(s)	2006, 2174
MalI	GATC	8 cut(s)	44, 338, 815, 1217, 1308, 1325, 1779, 2142
MbiI	CCGCTC	2 cut(s)	277, 435
MboI	GATC	8 cut(s)	42, 336, 813, 1215, 1306, 1323, 1777, 2140
MhlI	GDGCHC	5 cut(s)	611, 1533, 1540, 1679, 2075
MluI	ACGCGT	2 cut(s)	618, 1425
Mly113I	GGCGCC	3 cut(s)	264, 686, 1919
MlyI	GAGTC	7 cut(s)	135, 266, 277, 631, 657, 951, 1609
MmeI	TCCRAC	4 cut(s)	54, 928, 1311, 1624
MroNI	GCCGGC	3 cut(s)	13, 162, 749
MseI	TTAA	6 cut(s)	9, 534, 662, 671, 1092, 1953
MslI	CAYNNNNRTG	2 cut(s)	1271, 1637
Mva1269I	GAATGC	1 cut(s)	1699
MvaI	CCWGG	3 cut(s)	629, 1476, 1548
MvnI	CGCG	9 cut(s)	107, 140, 506, 620, 1259, 1305, 1427, 1740, 1805
NaeI	GCCGGC	3 cut(s)	15, 164, 751
NarI	GGCGCC	3 cut(s)	264, 686, 1919
NcoI	CCATGG	1 cut(s)	2013
NdeI	CATATG	1 cut(s)	2145
NdeII	GATC	8 cut(s)	42, 336, 813, 1215, 1306, 1323, 1777, 2140
NgoMIV	GCCGGC	3 cut(s)	13, 162, 749
NlaIII	CATG	8 cut(s)	211, 1231, 1487, 1624, 1674, 1909, 1960, 2017
NmeAIII	GCCGAG	2 cut(s)	114, 1341
NmuCI	GTSAC	9 cut(s)	85, 91, 169, 174, 437, 563, 634, 1793, 1831
NruI	TCGCGA	1 cut(s)	506
NspI	RCATGY	1 cut(s)	1960
OliI	CACNNNNGTG	2 cut(s)	1271, 1637
PaeR7I	CTCGAG	2 cut(s)	278, 326
PaqCI	CACCTGC	1 cut(s)	2058
PciI	ACATGT	1 cut(s)	1956
PcsI	WCGNNNNNNNCGW	6 cut(s)	276, 447, 492, 617, 705, 1107
PctI	GAATGC	1 cut(s)	1699
PdiI	GCCGGC	3 cut(s)	15, 164, 751
PfeI	GAWTC	5 cut(s)	61, 585, 774, 784, 2108
PflFI	GACNNNGTC	3 cut(s)	83, 125, 1799
PflMI	CCANNNNNTGG	1 cut(s)	250
PinAI	ACCGGT	1 cut(s)	1727
PleI	GAGTC	7 cut(s)	134, 265, 277, 631, 656, 951, 1608
PluTI	GGCGCC	3 cut(s)	267, 689, 1922
PmaCI	CACGTG	4 cut(s)	169, 612, 1033, 1330
PmlI	CACGTG	4 cut(s)	169, 612, 1033, 1330
PpsI	GAGTC	7 cut(s)	134, 265, 277, 631, 656, 951, 1608
Ppu21I	YACGTR	6 cut(s)	169, 612, 862, 868, 1033, 1330
PpuMI	RGGWCCY	1 cut(s)	318
PscI	ACATGT	1 cut(s)	1956
Psp124BI	GAGCTC	1 cut(s)	1679
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	3 cut(s)	627, 1474, 1546
PspCI	CACGTG	4 cut(s)	169, 612, 1033, 1330
PspEI	GGTNACC	1 cut(s)	1542
PspFI	CCCAGC	2 cut(s)	1135, 2063
PspGI	CCWGG	3 cut(s)	627, 1474, 1546
PspOMI	GGGCCC	1 cut(s)	1536
PspPPI	RGGWCCY	1 cut(s)	318
PspXI	VCTCGAGB	1 cut(s)	326
PstI	CTGCAG	1 cut(s)	762
PstNI	CAGNNNCTG	1 cut(s)	766
PsyI	GACNNNGTC	3 cut(s)	83, 125, 1799
RruI	TCGCGA	1 cut(s)	506
RseI	CAYNNNNRTG	2 cut(s)	1271, 1637
Rsr2I	CGGWCCG	1 cut(s)	523
RsrII	CGGWCCG	1 cut(s)	523
SacI	GAGCTC	1 cut(s)	1679
SaqAI	TTAA	6 cut(s)	9, 534, 662, 671, 1092, 1953
Sau3AI	GATC	8 cut(s)	42, 336, 813, 1215, 1306, 1323, 1777, 2140
SchI	GAGTC	7 cut(s)	135, 266, 277, 631, 657, 951, 1609
SduI	GDGCHC	5 cut(s)	611, 1533, 1540, 1679, 2075
SfaNI	GCATC	5 cut(s)	984, 1171, 1234, 1459, 2123
SfcI	CTRYAG	3 cut(s)	389, 758, 2189
SfoI	GGCGCC	3 cut(s)	265, 687, 1920
Sfr274I	CTCGAG	2 cut(s)	278, 326
SinI	GGWCC	5 cut(s)	318, 492, 523, 901, 1451
SlaI	CTCGAG	2 cut(s)	278, 326
SmaI	CCCGGG	3 cut(s)	910, 1562, 1589
SmiMI	CAYNNNNRTG	2 cut(s)	1271, 1637
SmlI	CTYRAG	3 cut(s)	278, 326, 1868
SmoI	CTYRAG	3 cut(s)	278, 326, 1868
SnaBI	TACGTA	1 cut(s)	868
SpeI	ACTAGT	2 cut(s)	2005, 2173
SspDI	GGCGCC	3 cut(s)	263, 685, 1918
SspMI	CTAG	2 cut(s)	2006, 2174
SstI	GAGCTC	1 cut(s)	1679
StyI	CCWWGG	2 cut(s)	1660, 2013
TaaI	ACNGT	4 cut(s)	91, 404, 851, 1897
TaqI	TCGA	9 cut(s)	22, 279, 300, 327, 366, 651, 708, 950, 2178
TaqII	GACCGA	1 cut(s)	509
TatI	WGTACW	6 cut(s)	1035, 1251, 1629, 1650, 1959, 2167
TauI	GCSGC	6 cut(s)	143, 458, 691, 1337, 1415, 1743
TfiI	GAWTC	5 cut(s)	61, 585, 774, 784, 2108
Tru1I	TTAA	6 cut(s)	9, 534, 662, 671, 1092, 1953
Tru9I	TTAA	6 cut(s)	9, 534, 662, 671, 1092, 1953
TscAI	CASTG	6 cut(s)	889, 1112, 1450, 1582, 1686, 1780
TseFI	GTSAC	9 cut(s)	85, 91, 169, 174, 437, 563, 634, 1793, 1831
TseI	GCWGC	5 cut(s)	757, 1375, 1667, 1769, 1850
Tsp45I	GTSAC	9 cut(s)	85, 91, 169, 174, 437, 563, 634, 1793, 1831
TspDTI	ATGAA	5 cut(s)	196, 753, 1394, 1637, 1922
TspGWI	ACGGA	3 cut(s)	138, 530, 1001
TspMI	CCCGGG	3 cut(s)	908, 1560, 1587
TspRI	CASTG	6 cut(s)	889, 1112, 1450, 1582, 1686, 1780
Tth111I	GACNNNGTC	3 cut(s)	83, 125, 1799
Van91I	CCANNNNNTGG	1 cut(s)	250
VneI	GTGCAC	1 cut(s)	607
VpaK11BI	GGWCC	5 cut(s)	318, 492, 523, 901, 1451
XagI	CCTNNNNNAGG	1 cut(s)	329
XceI	RCATGY	1 cut(s)	1960
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1912
XhoI	CTCGAG	2 cut(s)	278, 326
XmaI	CCCGGG	3 cut(s)	908, 1560, 1587
XmiI	GTMKAC	1 cut(s)	342
XspI	CTAG	2 cut(s)	2006, 2174
ZraI	GACGTC	3 cut(s)	151, 174, 271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.