FvH4_1g03090

CBL-interacting serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
1745900 .. 1750583
4684 bp
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UTR
Exon/CDS
Intron
FvH4_1g03090.t2

Sequence Viewer

Length: 1347 bp
ATGATGAAGAAGAAGGTGACCAGAAATGTAGGCAAGTATGAGGTTGGGCGAACGATCGGCGAAGGAACCTTCGCCAAGGTCAAGTTCGCCAGGAACGCCGAGACCGGCGAGAGTGTTGCCATGAAGGTCTTGGCTAAAAGCACCATTCTCAAGCACAGAATGGTTGATCAGATTAAGAGAGAGATTTCGATAATGAAGATTGTCAGGCATCCTAATATAGTGAGGTTGCATGAGGTTTTGGCTGGCCGGACTAAGATATATATAATTCTCGAGTTTGTAACTGGAGGAGAGTTGTTTGACAAAATTGTCCATCAAGGAAAGCTTCGTGAAAATGAATCAAGGAAATACTTTCAGCAGCTTATAGATGCGGTGTCTCATTGTCACAGCAAGGGTGTTTACCATAGAGACCTGAAGCCTGAAAATCTTCTCCTTGATGCTTATGGAAATTTGAAAGTTTCTGATTTTGGACTGAGTGCATTGCCCCAGCAAGGGGATGGTCTTCTTTTCACAACATGTGGAACCCCAAACTATGTCGCCCCTGAGGTGCTGGGCAGTAAAGGTTATGATGGTGCAGCTGCTGATGTTTGGTCGTGTGGGGTCATCCTTTATGTTCTTATGGCTGGATACCTCCCATTTGATGAGGCAAACCTTGCTGCCTTATATAAAAAGATTAACGCAGCAGAGTTCTCCTGCCCGTTTTGGTTCTCTCCAGGGGCAAATTCATTAATACATAAAATACTTGATCCCAATCCTAAAACTCGTTTTCGGATTGAAGAAATCAGAAAGGATCCATGGTTTAGAAAAAATTATGCGCCTGTTGAATATAGAGAAGATGAGGAAGTCAGTTTAGATGATGTTCGTGCAGTCTTTGAGGACATTGAGGACCAATATGCAGAAGAAAGAACAGATAATAAAGACAGCGGTCCTTTATTAATGAATGCATTTGAGATGATTACCCTCTCCCAAGGGCTAAATTTATCTGCTCTGTTTGACAGGAGACAGGATTATATAAAAAGACAAACTCGTTTTGTATCCCGCAAACCAGCTAAAGTTATAATTTCAAATGTAGAAGCTGTTGCAGAATCAATGAGTCTCAAGGTCCATACACGTAATTTCAAGACAAGACTTGAAGGGATATCTGCAAATAAGGCTGGACAATTTGCAGTTGTCCTTGAGATTTTCGAAGTTGCACCATCCCTTTTCATGGTAGATGTTCGAAAGGCAGCTGGTGATACTCTTGAATATCACAAGTTTTACAAAAATTTCTGCGCCAAGTTAGATGACATTATATGGAAACCAAAAGACGGTATGGCCAGTTCCAATATACTTAGAACGACGACTTGCTGA

Protein Analysis

449

Amino Acids

50.77

Weight (kDa)

8.93

Isoelectric Point (pI)

35.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 13 - 80 1.5e-13 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 15 - 80 5.2e-07 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 81 - 242 3.3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 81 - 238 7.7e-17 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 87 - 191 5.4e-08 Kinase-like
NAF PF03822 285 - 344 2.1e-19 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011788)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1055
AasI GACNNNNNNGTC 1 cut(s) 305
AciI CCGC 3 cut(s) 368, 921, 1036
AclWI GGATC 3 cut(s) 737, 782, 795
AcoI YGGCCR 2 cut(s) 244, 1311
AcsI RAATTY 4 cut(s) 445, 718, 973, 1261
AcuI CTGAAG 1 cut(s) 431
AfiI CCNNNNNNNGG 5 cut(s) 488, 489, 490, 1204, 1304
AflIII ACRYGT 2 cut(s) 512, 1106
AgsI TTSAA 7 cut(s) 451, 773, 821, 1062, 1117, 1130, 1241
AjnI CCWGG 2 cut(s) 89, 709
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
AluBI AGCT 6 cut(s) 322, 358, 575, 1046, 1073, 1226
AluI AGCT 6 cut(s) 322, 358, 575, 1046, 1073, 1226
Alw26I GTCTC 5 cut(s) 95, 378, 399, 991, 1097
AlwI GGATC 3 cut(s) 737, 782, 795
AlwNI CAGNNNCTG 1 cut(s) 578
Ama87I CYCGRG 1 cut(s) 269
AoxI GGCC 2 cut(s) 244, 1311
ApeKI GCWGC 6 cut(s) 355, 572, 575, 653, 677, 1223
ApoI RAATTY 4 cut(s) 445, 718, 973, 1261
AseI ATTAAT 2 cut(s) 725, 932
Asp700I GAANNNNTTC 1 cut(s) 423
AspLEI GCGC 2 cut(s) 814, 1271
AspS9I GGNCC 3 cut(s) 883, 923, 1099
AsuHPI GGTGA 2 cut(s) 28, 1241
AsuII TTCGAA 2 cut(s) 1182, 1216
AvaI CYCGRG 1 cut(s) 269
AvaII GGWCC 3 cut(s) 883, 923, 1099
AxyI CCTNAGG 1 cut(s) 540
BalI TGGCCA 1 cut(s) 1313
BamHI GGATCC 1 cut(s) 787
BbsI GAAGAC 1 cut(s) 491
BbvI GCAGC 6 cut(s) 367, 562, 584, 640, 689, 1235
BccI CCATC 4 cut(s) 318, 488, 560, 1201
BcgI CGANNNNNNTGC 2 cut(s) 98, 132
BciT130I CCWGG 2 cut(s) 91, 711
BciVI GTATCC 2 cut(s) 617, 1042
BclI TGATCA 1 cut(s) 166
BcoDI GTCTC 5 cut(s) 95, 378, 399, 991, 1097
BfuI GTATCC 2 cut(s) 617, 1042
BisI GCNGC 6 cut(s) 356, 573, 576, 654, 678, 1224
BlsI GCNGC 6 cut(s) 357, 574, 577, 655, 679, 1225
Bme1390I CCNGG 2 cut(s) 91, 711
Bme18I GGWCC 3 cut(s) 883, 923, 1099
BmeT110I CYCGRG 1 cut(s) 269
BmgT120I GGNCC 3 cut(s) 883, 923, 1099
BmiI GGNNCC 3 cut(s) 67, 520, 789
BmrFI CCNGG 2 cut(s) 91, 711
BmsI GCATC 3 cut(s) 217, 355, 424
BoxI GACNNNNGTC 1 cut(s) 921
BpiI GAAGAC 1 cut(s) 491
BpmI CTGGAG 2 cut(s) 303, 693
Bpu14I TTCGAA 2 cut(s) 1182, 1216
BpuEI CTTGAG 3 cut(s) 134, 1079, 1193
BsaAI YACGTR 1 cut(s) 1109
BsaBI GATNNNNATC 1 cut(s) 747
BsaI GGTCTC 2 cut(s) 95, 399
BsaJI CCNNGG 4 cut(s) 75, 710, 791, 964
Bsc4I CCNNNNNNNGG 5 cut(s) 488, 489, 490, 1204, 1304
Bse118I RCCGGY 1 cut(s) 104
Bse1I ACTGG 2 cut(s) 286, 1314
Bse21I CCTNAGG 1 cut(s) 540
Bse3DI GCAATG 1 cut(s) 476
Bse8I GATNNNNATC 1 cut(s) 747
BseBI CCWGG 2 cut(s) 91, 711
BseDI CCNNGG 4 cut(s) 75, 710, 791, 964
BseGI GGATG 4 cut(s) 208, 499, 600, 1193
BseJI GATNNNNATC 1 cut(s) 747
BseLI CCNNNNNNNGG 5 cut(s) 488, 489, 490, 1204, 1304
BseMI GCAATG 1 cut(s) 476
BseMII CTCAG 2 cut(s) 461, 531
BseNI ACTGG 2 cut(s) 286, 1314
BseRI GAGGAG 1 cut(s) 300
BseXI GCAGC 6 cut(s) 367, 562, 584, 640, 689, 1235
BseYI CCCAGC 2 cut(s) 483, 547
BsgI GTGCAG 2 cut(s) 591, 882
Bsh1285I CGRYCG 1 cut(s) 57
BshFI GGCC 2 cut(s) 246, 1313
BsiEI CGRYCG 1 cut(s) 57
BsiHKCI CYCGRG 1 cut(s) 269
BsiSI CCGG 2 cut(s) 105, 247
BslI CCNNNNNNNGG 5 cut(s) 488, 489, 490, 1204, 1304
BsmAI GTCTC 5 cut(s) 95, 378, 399, 991, 1097
BsmI GAATGC 1 cut(s) 943
BsnI GGCC 2 cut(s) 246, 1313
Bso31I GGTCTC 2 cut(s) 95, 399
BsoBI CYCGRG 1 cut(s) 269
Bsp119I TTCGAA 2 cut(s) 1182, 1216
Bsp143I GATC 4 cut(s) 54, 166, 742, 787
Bsp19I CCATGG 1 cut(s) 791
BspACI CCGC 3 cut(s) 368, 921, 1036
BspANI GGCC 2 cut(s) 246, 1313
BspCNI CTCAG 2 cut(s) 462, 532
BspLI GGNNCC 3 cut(s) 67, 520, 789
BspPI GGATC 3 cut(s) 737, 782, 795
BspT104I TTCGAA 2 cut(s) 1182, 1216
BspTNI GGTCTC 2 cut(s) 95, 399
BsrDI GCAATG 1 cut(s) 476
BsrFI RCCGGY 1 cut(s) 104
BsrI ACTGG 2 cut(s) 286, 1314
BssAI RCCGGY 1 cut(s) 104
BssECI CCNNGG 4 cut(s) 75, 710, 791, 964
BssMI GATC 4 cut(s) 54, 166, 742, 787
BssT1I CCWWGG 3 cut(s) 75, 791, 964
Bst2UI CCWGG 2 cut(s) 91, 711
Bst4CI ACNGT 1 cut(s) 1307
BstAPI GCANNNNNTGC 1 cut(s) 650
BstBAI YACGTR 1 cut(s) 1109
BstBI TTCGAA 2 cut(s) 1182, 1216
BstC8I GCNNGC 1 cut(s) 244
BstDEI CTNAG 4 cut(s) 252, 470, 540, 1328
BstDSI CCRYGG 1 cut(s) 791
BstEII GGTNACC 1 cut(s) 16
BstF5I GGATG 4 cut(s) 208, 499, 600, 1193
BstHHI GCGC 2 cut(s) 814, 1271
BstKTI GATC 4 cut(s) 57, 169, 745, 790
BstMAI GTCTC 5 cut(s) 95, 378, 399, 991, 1097
BstMBI GATC 4 cut(s) 54, 166, 742, 787
BstMCI CGRYCG 1 cut(s) 57
BstMWI GCNNNNNNNGC 3 cut(s) 95, 650, 1148
BstNI CCWGG 2 cut(s) 91, 711
BstNSI RCATGY 1 cut(s) 516
BstPAI GACNNNNGTC 1 cut(s) 921
BstPI GGTNACC 1 cut(s) 16
BstSCI CCNGG 2 cut(s) 89, 709
BstV1I GCAGC 6 cut(s) 367, 562, 584, 640, 689, 1235
BstV2I GAAGAC 1 cut(s) 491
BstX2I RGATCY 1 cut(s) 787
BstYI RGATCY 1 cut(s) 787
Bsu36I CCTNAGG 1 cut(s) 540
BsuI GTATCC 2 cut(s) 617, 1042
BsuRI GGCC 2 cut(s) 246, 1313
BtgI CCRYGG 1 cut(s) 791
BtsCI GGATG 4 cut(s) 208, 499, 600, 1193
Cac8I GCNNGC 1 cut(s) 244
CaiI CAGNNNCTG 1 cut(s) 578
CfoI GCGC 2 cut(s) 814, 1271
Cfr10I RCCGGY 1 cut(s) 104
Cfr13I GGNCC 3 cut(s) 883, 923, 1099
CviAII CATG 5 cut(s) 121, 230, 513, 792, 1204
DdeI CTNAG 4 cut(s) 252, 470, 540, 1328
DpnI GATC 4 cut(s) 56, 168, 744, 789
DpnII GATC 4 cut(s) 54, 166, 742, 787
DrdI GACNNNNNNGTC 1 cut(s) 305
DseDI GACNNNNNNGTC 1 cut(s) 305
EaeI YGGCCR 2 cut(s) 244, 1311
Eco130I CCWWGG 3 cut(s) 75, 791, 964
Eco31I GGTCTC 2 cut(s) 95, 399
Eco32I GATATC 1 cut(s) 1137
Eco47I GGWCC 3 cut(s) 883, 923, 1099
Eco57I CTGAAG 1 cut(s) 431
Eco81I CCTNAGG 1 cut(s) 540
Eco88I CYCGRG 1 cut(s) 269
Eco91I GGTNACC 1 cut(s) 16
EcoO65I GGTNACC 1 cut(s) 16
EcoRII CCWGG 2 cut(s) 89, 709
EcoRV GATATC 1 cut(s) 1137
EcoT14I CCWWGG 3 cut(s) 75, 791, 964
EcoT22I ATGCAT 1 cut(s) 943
ErhI CCWWGG 3 cut(s) 75, 791, 964
FaeI CATG 5 cut(s) 124, 233, 516, 795, 1207
FalI AAGNNNNNCTT 2 cut(s) 306, 338
FatI CATG 5 cut(s) 120, 229, 512, 791, 1203
FauI CCCGC 1 cut(s) 1043
FbaI TGATCA 1 cut(s) 166
Fnu4HI GCNGC 6 cut(s) 356, 573, 576, 654, 678, 1224
FokI GGATG 4 cut(s) 195, 506, 587, 1180
Fsp4HI GCNGC 6 cut(s) 356, 573, 576, 654, 678, 1224
GlaI GCGC 2 cut(s) 813, 1270
GluI GCNGC 6 cut(s) 356, 573, 576, 654, 678, 1224
GsaI CCCAGC 2 cut(s) 487, 551
GsuI CTGGAG 2 cut(s) 303, 693
HaeIII GGCC 2 cut(s) 246, 1313
HapII CCGG 2 cut(s) 105, 247
HhaI GCGC 2 cut(s) 814, 1271
Hin1II CATG 5 cut(s) 124, 233, 516, 795, 1207
Hin6I GCGC 2 cut(s) 812, 1269
HinP1I GCGC 2 cut(s) 812, 1269
HindIII AAGCTT 1 cut(s) 320
HinfI GANTC 3 cut(s) 335, 1082, 1090
HpaII CCGG 2 cut(s) 105, 247
HphI GGTGA 2 cut(s) 28, 1241
Hpy166II GTNNAC 1 cut(s) 397
Hpy188I TCNGA 4 cut(s) 171, 460, 768, 782
Hpy188III TCNNGA 4 cut(s) 269, 326, 1117, 1238
Hpy8I GTNNAC 1 cut(s) 397
Hpy99I CGWCG 1 cut(s) 1339
HpyAV CCTTC 5 cut(s) 7, 56, 79, 118, 1124
HpyCH4III ACNGT 1 cut(s) 1307
HpyCH4IV ACGT 1 cut(s) 1108
HpyF10VI GCNNNNNNNGC 3 cut(s) 95, 650, 1148
HpyF3I CTNAG 4 cut(s) 252, 470, 540, 1328
HpySE526I ACGT 1 cut(s) 1108
Hsp92II CATG 5 cut(s) 124, 233, 516, 795, 1207
HspAI GCGC 2 cut(s) 812, 1269
Ksp22I TGATCA 1 cut(s) 166
Kzo9I GATC 4 cut(s) 54, 166, 742, 787
Lsp1109I GCAGC 6 cut(s) 367, 562, 584, 640, 689, 1235
LweI GCATC 3 cut(s) 217, 355, 424
MaeII ACGT 1 cut(s) 1108
MaeIII GTNAC 3 cut(s) 16, 277, 380
MalI GATC 4 cut(s) 56, 168, 744, 789
MboI GATC 4 cut(s) 54, 166, 742, 787
MboII GAAGA 8 cut(s) 19, 22, 208, 416, 491, 785, 842, 908
MflI RGATCY 1 cut(s) 787
MlsI TGGCCA 1 cut(s) 1313
MluNI TGGCCA 1 cut(s) 1313
MlyI GAGTC 1 cut(s) 1099
Mox20I TGGCCA 1 cut(s) 1313
Mph1103I ATGCAT 1 cut(s) 943
MroXI GAANNNNTTC 1 cut(s) 423
MscI TGGCCA 1 cut(s) 1313
MseI TTAA 4 cut(s) 174, 672, 725, 932
Msp20I TGGCCA 1 cut(s) 1313
MspA1I CMGCKG 3 cut(s) 575, 921, 1226
MspI CCGG 2 cut(s) 105, 247
MspR9I CCNGG 2 cut(s) 91, 711
Mva1269I GAATGC 1 cut(s) 943
MvaI CCWGG 2 cut(s) 91, 711
MwoI GCNNNNNNNGC 3 cut(s) 95, 650, 1148
NcoI CCATGG 1 cut(s) 791
NdeII GATC 4 cut(s) 54, 166, 742, 787
NlaIII CATG 5 cut(s) 124, 233, 516, 795, 1207
NlaIV GGNNCC 3 cut(s) 67, 520, 789
NmeAIII GCCGAG 1 cut(s) 124
NmuCI GTSAC 2 cut(s) 16, 380
NsiI ATGCAT 1 cut(s) 943
NspI RCATGY 1 cut(s) 516
NspV TTCGAA 2 cut(s) 1182, 1216
PaeR7I CTCGAG 1 cut(s) 269
PciI ACATGT 1 cut(s) 512
PctI GAATGC 1 cut(s) 943
PdmI GAANNNNTTC 1 cut(s) 423
PfeI GAWTC 2 cut(s) 335, 1082
PkrI GCNGC 6 cut(s) 357, 574, 577, 655, 679, 1225
Ple19I CGATCG 1 cut(s) 57
PleI GAGTC 1 cut(s) 1098
PpsI GAGTC 1 cut(s) 1098
Ppu21I YACGTR 1 cut(s) 1109
PscI ACATGT 1 cut(s) 512
PshAI GACNNNNGTC 1 cut(s) 921
PshBI ATTAAT 2 cut(s) 725, 932
PsiI TTATAA 1 cut(s) 1055
Psp6I CCWGG 2 cut(s) 89, 709
PspEI GGTNACC 1 cut(s) 16
PspFI CCCAGC 2 cut(s) 483, 547
PspGI CCWGG 2 cut(s) 89, 709
PspN4I GGNNCC 3 cut(s) 67, 520, 789
PspPI GGNCC 3 cut(s) 883, 923, 1099
PsrI GAACNNNNNNTAC 2 cut(s) 1300, 1332
PstNI CAGNNNCTG 1 cut(s) 578
PsuI RGATCY 1 cut(s) 787
PvuI CGATCG 1 cut(s) 57
PvuII CAGCTG 2 cut(s) 575, 1226
SaqAI TTAA 4 cut(s) 174, 672, 725, 932
SatI GCNGC 6 cut(s) 356, 573, 576, 654, 678, 1224
Sau3AI GATC 4 cut(s) 54, 166, 742, 787
Sau96I GGNCC 3 cut(s) 883, 923, 1099
SchI GAGTC 1 cut(s) 1099
ScrFI CCNGG 2 cut(s) 91, 711
SfaNI GCATC 3 cut(s) 217, 355, 424
Sfr274I CTCGAG 1 cut(s) 269
SfuI TTCGAA 2 cut(s) 1182, 1216
SinI GGWCC 3 cut(s) 883, 923, 1099
SlaI CTCGAG 1 cut(s) 269
SmlI CTYRAG 4 cut(s) 149, 269, 1094, 1172
SmoI CTYRAG 4 cut(s) 149, 269, 1094, 1172
SsiI CCGC 3 cut(s) 368, 921, 1036
StyD4I CCNGG 2 cut(s) 89, 709
StyI CCWWGG 3 cut(s) 75, 791, 964
TaaI ACNGT 1 cut(s) 1307
TaiI ACGT 1 cut(s) 1111
TaqI TCGA 4 cut(s) 188, 270, 1182, 1216
TfiI GAWTC 2 cut(s) 335, 1082
Tru1I TTAA 4 cut(s) 174, 672, 725, 932
Tru9I TTAA 4 cut(s) 174, 672, 725, 932
TseFI GTSAC 2 cut(s) 16, 380
TseI GCWGC 6 cut(s) 355, 572, 575, 653, 677, 1223
Tsp45I GTSAC 2 cut(s) 16, 380
TspDTI ATGAA 7 cut(s) 20, 137, 209, 348, 711, 950, 1192
VpaK11BI GGWCC 3 cut(s) 883, 923, 1099
VspI ATTAAT 2 cut(s) 725, 932
XapI RAATTY 4 cut(s) 445, 718, 973, 1261
XceI RCATGY 1 cut(s) 516
XcmI CCANNNNNNNNNTGG 2 cut(s) 127, 491
XhoI CTCGAG 1 cut(s) 269
XmnI GAANNNNTTC 1 cut(s) 423
Zsp2I ATGCAT 1 cut(s) 943
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.