Rw2G002920

CBL-interacting serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
2745279 .. 2749399
4121 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G002920.1

Sequence Viewer

Length: 1344 bp
ATGAAGAAGAAGGTGACAAGAAATGTAGGCAAGTATGAGGTTGGGCGAACGATCGGCGAAGGAACCTTCGCCAAGGTTAAGTTCGCCAGGAACGCCGAGACCGGCGAGAGTGTTGCCGTGAAGGTTATGGCCAAAAGCACCATTCTCAAGCACAGAATGGTTGATCAGATTAAAAGAGAGATATCCATAATGAAGATTGTCAGGCATCCGAATATAGTGAGGTTGCATGAGGTTTTGGCTGGCCGGACAAAGATATATATAATTCTTGAGTTTGTAACCGGAGGAGAATTGTTTGACAAAATTGTTCATCAAGGAAGGCTTCGGGAAAATGAATCAAGGAAATACTTTCAGCAGCTTATAGATGCAGTGTCTCATTGTCACAGTAAGGGTGTATACCACAGAGACCTGAAGCCTGAAAACCTTCTCCTTGATTCTTATGGAAATTTGAAAGTTTCTGATTTTGGACTAAGTGCATTGCCCCAGCAAGGGGTCGGTCTTCTTCACACAACATGTGGAACCCCAAACTACGTTGCCCCTGAGGTGCTGGGCAATCAAGGTTATGATGGTGCAGCTGCTGATGTTTGGTCTTGTGGGGTCATCCTCTTTGTTTTAATGGCTGGATACCTCCCATTTCATGAGACAAACCTTGCTACCTTATATGAAAAGATTAATGCAGCACAGTTCTCCTGCCCGTTTTGGTTCTCTCCAGGGGCAAATTCATTAATACATAAGATACTTGATCCCAATCCTAAAACTCGTATTCGGATTGATGGAATCAGAAAGGATCCTTGGTTTAGAAAACATTATGCGCCTGTTGAATATAGGGAAGATGAGGAAGTCAGTTTAGATGATGTTCGTGCAGTCTTTGAGGACATTGAGGATCAATATGCAGAAGAAAGAACAGATAATAAAGACGGCGGTCCTTTATTAATGAATGCATTTGAGATGATTACCCTCTCCCAAGGGCTAAATTTATCTGCTTTGTTCGACAGGAGACAGGATTGTATAAAACGACAAACTCGTTTTGTTTCCCGCAAACCAGCTAAAGTCATAATTTCAAATGTAGAAGCTGTTGCAGAATCAATGGGTCTCAAGGTCCATACACGGAATTTCAAGACAAGACTTGAAGGTATATCTGCAAATAAGGCTGGGCAATTTGCAGTTGTCCTCGAGATCTTCGAAGTTGCACCATCCCTTTTTATGGTGGATGTTCGAAAGGCCGCTGGTGAAACTCTTGAATATCACAAGTTTTACAAAAATTTATGTGCCAAGTTAGATGAGATTATATGGAAACCGAAAGAGGGCATGGCCAGTTCCAATTTACTTAGAACAATGACTTGCTGA

Protein Analysis

447

Amino Acids

50.56

Weight (kDa)

9.0

Isoelectric Point (pI)

32.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 12 - 265 1.7e-72 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 14 - 260 2e-36 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 112 - 214 1.1e-06 Kinase-like
NAF PF03822 308 - 367 8.4e-20 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011788)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 393
AciI CCGC 3 cut(s) 918, 1033, 1221
AclWI GGATC 4 cut(s) 734, 779, 792, 888
AcoI YGGCCR 3 cut(s) 129, 241, 1308
AcsI RAATTY 5 cut(s) 442, 715, 970, 1108, 1258
AcuI CTGAAG 1 cut(s) 428
AfiI CCNNNNNNNGG 5 cut(s) 485, 486, 487, 1201, 1301
AflIII ACRYGT 1 cut(s) 509
AgsI TTSAA 6 cut(s) 448, 818, 1059, 1114, 1127, 1238
AjnI CCWGG 2 cut(s) 86, 706
AjuI GAANNNNNNNTTGG 4 cut(s) 65, 97, 772, 804
AluBI AGCT 4 cut(s) 355, 572, 1043, 1070
AluI AGCT 4 cut(s) 355, 572, 1043, 1070
Alw26I GTCTC 6 cut(s) 92, 375, 396, 632, 988, 1094
AlwI GGATC 4 cut(s) 734, 779, 792, 888
AlwNI CAGNNNCTG 1 cut(s) 575
Ama87I CYCGRG 1 cut(s) 1169
AoxI GGCC 4 cut(s) 129, 241, 1218, 1308
ApeKI GCWGC 4 cut(s) 352, 569, 572, 674
ApoI RAATTY 5 cut(s) 442, 715, 970, 1108, 1258
AseI ATTAAT 3 cut(s) 669, 722, 929
Asp700I GAANNNNTTC 1 cut(s) 420
AspLEI GCGC 1 cut(s) 811
AspS9I GGNCC 2 cut(s) 920, 1096
AsuHPI GGTGA 2 cut(s) 25, 1238
AsuII TTCGAA 2 cut(s) 1179, 1213
AvaI CYCGRG 1 cut(s) 1169
AvaII GGWCC 2 cut(s) 920, 1096
AxyI CCTNAGG 1 cut(s) 537
BalI TGGCCA 2 cut(s) 131, 1310
BamHI GGATCC 1 cut(s) 784
BbsI GAAGAC 1 cut(s) 488
BbvI GCAGC 4 cut(s) 364, 559, 581, 686
BccI CCATC 3 cut(s) 557, 764, 1198
BceAI ACGGC 2 cut(s) 101, 931
BcgI CGANNNNNNTGC 2 cut(s) 95, 129
BciT130I CCWGG 2 cut(s) 88, 708
BciVI GTATCC 1 cut(s) 614
BclI TGATCA 1 cut(s) 163
BcoDI GTCTC 6 cut(s) 92, 375, 396, 632, 988, 1094
BfuI GTATCC 1 cut(s) 614
BglII AGATCT 1 cut(s) 1173
BisI GCNGC 5 cut(s) 353, 570, 573, 675, 1221
BlsI GCNGC 5 cut(s) 354, 571, 574, 676, 1222
Bme1390I CCNGG 2 cut(s) 88, 708
Bme18I GGWCC 2 cut(s) 920, 1096
BmeT110I CYCGRG 1 cut(s) 1169
BmgT120I GGNCC 2 cut(s) 920, 1096
BmiI GGNNCC 3 cut(s) 64, 517, 786
BmrFI CCNGG 2 cut(s) 88, 708
BmsI GCATC 2 cut(s) 214, 352
BoxI GACNNNNGTC 1 cut(s) 918
BpiI GAAGAC 1 cut(s) 488
BpmI CTGGAG 1 cut(s) 690
Bpu14I TTCGAA 2 cut(s) 1179, 1213
BpuEI CTTGAG 3 cut(s) 131, 287, 1076
BsaBI GATNNNNATC 1 cut(s) 744
BsaI GGTCTC 3 cut(s) 92, 396, 1094
BsaJI CCNNGG 4 cut(s) 72, 707, 788, 961
BsaWI WCCGGW 1 cut(s) 278
Bsc4I CCNNNNNNNGG 5 cut(s) 485, 486, 487, 1201, 1301
Bse118I RCCGGY 1 cut(s) 101
Bse1I ACTGG 1 cut(s) 1311
Bse21I CCTNAGG 1 cut(s) 537
Bse3DI GCAATG 1 cut(s) 473
Bse8I GATNNNNATC 1 cut(s) 744
BseBI CCWGG 2 cut(s) 88, 708
BseDI CCNNGG 4 cut(s) 72, 707, 788, 961
BseGI GGATG 4 cut(s) 205, 597, 1190, 1213
BseJI GATNNNNATC 1 cut(s) 744
BseLI CCNNNNNNNGG 5 cut(s) 485, 486, 487, 1201, 1301
BseMI GCAATG 1 cut(s) 473
BseMII CTCAG 1 cut(s) 528
BseNI ACTGG 1 cut(s) 1311
BseRI GAGGAG 1 cut(s) 297
BseXI GCAGC 4 cut(s) 364, 559, 581, 686
BseYI CCCAGC 3 cut(s) 480, 544, 1148
BsgI GTGCAG 2 cut(s) 588, 879
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 4 cut(s) 131, 243, 1220, 1310
BsiEI CGRYCG 1 cut(s) 54
BsiHKCI CYCGRG 1 cut(s) 1169
BsiSI CCGG 3 cut(s) 102, 244, 279
BslI CCNNNNNNNGG 5 cut(s) 485, 486, 487, 1201, 1301
BsmAI GTCTC 6 cut(s) 92, 375, 396, 632, 988, 1094
BsmI GAATGC 1 cut(s) 940
BsnI GGCC 4 cut(s) 131, 243, 1220, 1310
Bso31I GGTCTC 3 cut(s) 92, 396, 1094
BsoBI CYCGRG 1 cut(s) 1169
Bsp119I TTCGAA 2 cut(s) 1179, 1213
Bsp143I GATC 6 cut(s) 51, 163, 739, 784, 880, 1173
BspACI CCGC 3 cut(s) 918, 1033, 1221
BspANI GGCC 4 cut(s) 131, 243, 1220, 1310
BspCNI CTCAG 1 cut(s) 529
BspHI TCATGA 1 cut(s) 634
BspLI GGNNCC 3 cut(s) 64, 517, 786
BspPI GGATC 4 cut(s) 734, 779, 792, 888
BspT104I TTCGAA 2 cut(s) 1179, 1213
BspTNI GGTCTC 3 cut(s) 92, 396, 1094
BsrDI GCAATG 1 cut(s) 473
BsrFI RCCGGY 1 cut(s) 101
BsrI ACTGG 1 cut(s) 1311
BssAI RCCGGY 1 cut(s) 101
BssECI CCNNGG 4 cut(s) 72, 707, 788, 961
BssMI GATC 6 cut(s) 51, 163, 739, 784, 880, 1173
BssNAI GTATAC 1 cut(s) 394
BssT1I CCWWGG 3 cut(s) 72, 788, 961
Bst1107I GTATAC 1 cut(s) 394
Bst2UI CCWGG 2 cut(s) 88, 708
Bst4CI ACNGT 2 cut(s) 383, 681
BstBI TTCGAA 2 cut(s) 1179, 1213
BstC8I GCNNGC 1 cut(s) 241
BstDEI CTNAG 3 cut(s) 467, 537, 1325
BstF5I GGATG 4 cut(s) 205, 597, 1190, 1213
BstHHI GCGC 1 cut(s) 811
BstKTI GATC 6 cut(s) 54, 166, 742, 787, 883, 1176
BstMAI GTCTC 6 cut(s) 92, 375, 396, 632, 988, 1094
BstMBI GATC 6 cut(s) 51, 163, 739, 784, 880, 1173
BstMCI CGRYCG 1 cut(s) 54
BstMWI GCNNNNNNNGC 2 cut(s) 92, 1145
BstNI CCWGG 2 cut(s) 88, 708
BstNSI RCATGY 1 cut(s) 513
BstPAI GACNNNNGTC 1 cut(s) 918
BstSCI CCNGG 2 cut(s) 86, 706
BstV1I GCAGC 4 cut(s) 364, 559, 581, 686
BstV2I GAAGAC 1 cut(s) 488
BstX2I RGATCY 2 cut(s) 784, 1173
BstYI RGATCY 2 cut(s) 784, 1173
BstZ17I GTATAC 1 cut(s) 394
Bsu36I CCTNAGG 1 cut(s) 537
BsuI GTATCC 1 cut(s) 614
BsuRI GGCC 4 cut(s) 131, 243, 1220, 1310
BtsCI GGATG 4 cut(s) 205, 597, 1190, 1213
BtsI GCAGTG 1 cut(s) 372
BtsIMutI CAGTG 1 cut(s) 372
Cac8I GCNNGC 1 cut(s) 241
CaiI CAGNNNCTG 1 cut(s) 575
CciI TCATGA 1 cut(s) 634
CfoI GCGC 1 cut(s) 811
Cfr10I RCCGGY 1 cut(s) 101
Cfr13I GGNCC 2 cut(s) 920, 1096
CviAII CATG 4 cut(s) 227, 510, 635, 1306
DdeI CTNAG 3 cut(s) 467, 537, 1325
DpnI GATC 6 cut(s) 53, 165, 741, 786, 882, 1175
DpnII GATC 6 cut(s) 51, 163, 739, 784, 880, 1173
EaeI YGGCCR 3 cut(s) 129, 241, 1308
Eco130I CCWWGG 3 cut(s) 72, 788, 961
Eco31I GGTCTC 3 cut(s) 92, 396, 1094
Eco32I GATATC 1 cut(s) 183
Eco47I GGWCC 2 cut(s) 920, 1096
Eco57I CTGAAG 1 cut(s) 428
Eco81I CCTNAGG 1 cut(s) 537
Eco88I CYCGRG 1 cut(s) 1169
EcoRII CCWGG 2 cut(s) 86, 706
EcoRV GATATC 1 cut(s) 183
EcoT14I CCWWGG 3 cut(s) 72, 788, 961
EcoT22I ATGCAT 1 cut(s) 940
ErhI CCWWGG 3 cut(s) 72, 788, 961
FaeI CATG 4 cut(s) 230, 513, 638, 1309
FalI AAGNNNNNCTT 2 cut(s) 303, 335
FatI CATG 4 cut(s) 226, 509, 634, 1305
FauI CCCGC 1 cut(s) 1040
FbaI TGATCA 1 cut(s) 163
FblI GTMKAC 1 cut(s) 393
Fnu4HI GCNGC 5 cut(s) 353, 570, 573, 675, 1221
FokI GGATG 4 cut(s) 192, 584, 1177, 1220
Fsp4HI GCNGC 5 cut(s) 353, 570, 573, 675, 1221
GlaI GCGC 1 cut(s) 810
GluI GCNGC 5 cut(s) 353, 570, 573, 675, 1221
GsaI CCCAGC 3 cut(s) 484, 548, 1152
GsuI CTGGAG 1 cut(s) 690
HaeIII GGCC 4 cut(s) 131, 243, 1220, 1310
HapII CCGG 3 cut(s) 102, 244, 279
HhaI GCGC 1 cut(s) 811
Hin1II CATG 4 cut(s) 230, 513, 638, 1309
Hin6I GCGC 1 cut(s) 809
HinP1I GCGC 1 cut(s) 809
HinfI GANTC 4 cut(s) 332, 431, 774, 1079
HpaII CCGG 3 cut(s) 102, 244, 279
HphI GGTGA 2 cut(s) 25, 1238
Hpy166II GTNNAC 1 cut(s) 394
Hpy188I TCNGA 5 cut(s) 168, 210, 457, 765, 779
Hpy188III TCNNGA 6 cut(s) 266, 323, 635, 1114, 1171, 1235
Hpy8I GTNNAC 1 cut(s) 394
HpyAV CCTTC 7 cut(s) 4, 53, 76, 115, 309, 431, 1121
HpyCH4III ACNGT 2 cut(s) 383, 681
HpyCH4IV ACGT 1 cut(s) 528
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 1145
HpyF3I CTNAG 3 cut(s) 467, 537, 1325
HpySE526I ACGT 1 cut(s) 528
Hsp92II CATG 4 cut(s) 230, 513, 638, 1309
HspAI GCGC 1 cut(s) 809
Ksp22I TGATCA 1 cut(s) 163
Kzo9I GATC 6 cut(s) 51, 163, 739, 784, 880, 1173
Lsp1109I GCAGC 4 cut(s) 364, 559, 581, 686
LweI GCATC 2 cut(s) 214, 352
MaeII ACGT 1 cut(s) 528
MaeIII GTNAC 3 cut(s) 13, 274, 377
MalI GATC 6 cut(s) 53, 165, 741, 786, 882, 1175
MboI GATC 6 cut(s) 51, 163, 739, 784, 880, 1173
MboII GAAGA 8 cut(s) 16, 19, 205, 488, 491, 839, 905, 1168
MflI RGATCY 2 cut(s) 784, 1173
MlsI TGGCCA 2 cut(s) 131, 1310
MluNI TGGCCA 2 cut(s) 131, 1310
Mox20I TGGCCA 2 cut(s) 131, 1310
Mph1103I ATGCAT 1 cut(s) 940
MroXI GAANNNNTTC 1 cut(s) 420
MscI TGGCCA 2 cut(s) 131, 1310
MseI TTAA 6 cut(s) 78, 171, 611, 669, 722, 929
Msp20I TGGCCA 2 cut(s) 131, 1310
MspA1I CMGCKG 2 cut(s) 572, 1223
MspI CCGG 3 cut(s) 102, 244, 279
MspR9I CCNGG 2 cut(s) 88, 708
Mva1269I GAATGC 1 cut(s) 940
MvaI CCWGG 2 cut(s) 88, 708
MwoI GCNNNNNNNGC 2 cut(s) 92, 1145
NdeII GATC 6 cut(s) 51, 163, 739, 784, 880, 1173
NlaIII CATG 4 cut(s) 230, 513, 638, 1309
NlaIV GGNNCC 3 cut(s) 64, 517, 786
NmeAIII GCCGAG 1 cut(s) 121
NmuCI GTSAC 2 cut(s) 13, 377
NsiI ATGCAT 1 cut(s) 940
NspI RCATGY 1 cut(s) 513
NspV TTCGAA 2 cut(s) 1179, 1213
PaeR7I CTCGAG 1 cut(s) 1169
PagI TCATGA 1 cut(s) 634
PciI ACATGT 1 cut(s) 509
PcsI WCGNNNNNNNCGW 2 cut(s) 1018, 1176
PctI GAATGC 1 cut(s) 940
PdmI GAANNNNTTC 1 cut(s) 420
PfeI GAWTC 4 cut(s) 332, 431, 774, 1079
PkrI GCNGC 5 cut(s) 354, 571, 574, 676, 1222
Ple19I CGATCG 1 cut(s) 54
PscI ACATGT 1 cut(s) 509
PshAI GACNNNNGTC 1 cut(s) 918
PshBI ATTAAT 3 cut(s) 669, 722, 929
Psp6I CCWGG 2 cut(s) 86, 706
PspFI CCCAGC 3 cut(s) 480, 544, 1148
PspGI CCWGG 2 cut(s) 86, 706
PspN4I GGNNCC 3 cut(s) 64, 517, 786
PspPI GGNCC 2 cut(s) 920, 1096
PstNI CAGNNNCTG 1 cut(s) 575
PsuI RGATCY 2 cut(s) 784, 1173
PvuI CGATCG 1 cut(s) 54
PvuII CAGCTG 1 cut(s) 572
SaqAI TTAA 6 cut(s) 78, 171, 611, 669, 722, 929
SatI GCNGC 5 cut(s) 353, 570, 573, 675, 1221
Sau3AI GATC 6 cut(s) 51, 163, 739, 784, 880, 1173
Sau96I GGNCC 2 cut(s) 920, 1096
ScrFI CCNGG 2 cut(s) 88, 708
SfaNI GCATC 2 cut(s) 214, 352
Sfr274I CTCGAG 1 cut(s) 1169
SfuI TTCGAA 2 cut(s) 1179, 1213
SinI GGWCC 2 cut(s) 920, 1096
SlaI CTCGAG 1 cut(s) 1169
SmlI CTYRAG 4 cut(s) 146, 266, 1091, 1169
SmoI CTYRAG 4 cut(s) 146, 266, 1091, 1169
SsiI CCGC 3 cut(s) 918, 1033, 1221
StyD4I CCNGG 2 cut(s) 86, 706
StyI CCWWGG 3 cut(s) 72, 788, 961
TaaI ACNGT 2 cut(s) 383, 681
TaiI ACGT 1 cut(s) 531
TaqI TCGA 4 cut(s) 987, 1170, 1179, 1213
TaqII GACCGA 1 cut(s) 482
TauI GCSGC 1 cut(s) 1223
TfiI GAWTC 4 cut(s) 332, 431, 774, 1079
Tru1I TTAA 6 cut(s) 78, 171, 611, 669, 722, 929
Tru9I TTAA 6 cut(s) 78, 171, 611, 669, 722, 929
TscAI CASTG 1 cut(s) 372
TseFI GTSAC 2 cut(s) 13, 377
TseI GCWGC 4 cut(s) 352, 569, 572, 674
Tsp45I GTSAC 2 cut(s) 13, 377
TspDTI ATGAA 8 cut(s) 17, 206, 296, 345, 623, 675, 708, 947
TspGWI ACGGA 1 cut(s) 1120
TspRI CASTG 1 cut(s) 372
VpaK11BI GGWCC 2 cut(s) 920, 1096
VspI ATTAAT 3 cut(s) 669, 722, 929
XapI RAATTY 5 cut(s) 442, 715, 970, 1108, 1258
XceI RCATGY 1 cut(s) 513
XhoI CTCGAG 1 cut(s) 1169
XmiI GTMKAC 1 cut(s) 393
XmnI GAANNNNTTC 1 cut(s) 420
Zsp2I ATGCAT 1 cut(s) 940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.