Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0011788

Physical Location & Seq

Genomic Coordinates Forward (+)

56971716 .. 56974156

Gene Structure 2441 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0482100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGGATGCAGGATCAATGAATTCTTCATCCAACTACAAGTCTAACTCCAGAGGCCCTCTGCAAGAACAGTTCATTCAGAGAAAGAGTTCTCGGGAAAACTTGGACAGATTCATACCAAACAGATCAGCAATGGATATGGGCTATGCGCAATCTATGCTAACTGAAAGCAGGAAAGGTAAGGAAAACCCTGCTATCAGTTCTCCATCCAGGGAGGCCTATCAGAGGAAATTGGCAGAGGCTTTGAACATGAACCGCACTCGGATTCTTGCTTTCAAGAACAAGCCTCCGGCCCCGGTGGATCTGTACCCCAAAGATTTCTTCTCTTCTCAAACCCAAGATAAGCCAGCAAAGCCCAGGAGACACATTCCTCAAACCTCAGAGAGGACATTGGATGCTCCTGACCTTGTCGATGACTACTACCTCAATCTGTTGGATTGGGGAAGTGCCAATGTACTCGCAATTGCTCTCGCAAACACAGTTTACTTGTGGGATGCTAGCACTGGCTCTACTTCGGAATTGGAGACTTTTGATGATGAAACTGGACCTGTAACCAGTGTCAGTTGGGCTCCTGATGGACGCCACATTGCCATTGGACTTAACAATTCCGAAGTACAGCTATGGGACTCAACTGCTACTAAGCAGCTGAGGACTTTGAGAGGTTGCCACAGTTCGCGAGTTGGCTCATTGGCATGGAACAACAACATTCTTACTACTGGAGGAATGGACGGCTGTATTGTCAACAATGATGTGAGAGTTAGATCCCACATTGTTGAGACATACAGAGGGCATGAGCAAGAGGTTTGTGGACTTAAATGGTCAGCCTCTGGGCAGCAATTGGCAAGTGGAGGAAATGACAACCTACTGCATATATGGGACAGATCAGTTGCATCTTCACAGTCATCAACACAGTGGCTTCACAGGCTTGAAGATCATACAGCTGCTGTTAAAGCCCTTGCTTGGTGTCCATTCCAGAGCAACTTGCTTGCTTCCGGTGGAGGTGGGGGTGATCGGTGCATAAAGTTCTGGAACACCCACACAGGCGCATGCTTGAACTCAGTAGACACTGGGTCTCAGGTTTGCTCTCTGCTTTGGAACAAGAATGAAAGGGAGTTGCTTAGCTCACACGGGTTTACACAGAACCAGCTGACTCTTTGGAAGTACCCATCCATGGTTAAAATGGCAGAACTTACAGGTCACACTTCCAGGGTTCTTTATATGGCTCAGAGTCCGGATGGTTGCACAGTAGCATCAGCGGCTGGTGATGAAACCCTGAGATTCTGGAATGTCTTTGGTGTCCCTGAGGTGGCTAAACCAGCTCCTAAAGCTCATTCTGAACCTTTTGCTCATATGAACCGTATCCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009705 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0031090 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0098588 GO:0098805 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

454

Amino Acids

50.27

Weight (kDa)

7.65

Isoelectric Point (pI)

52.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	130 - 427	5.5e-126	CDC20/Fizzy WD40 domain
WD40_WDHD1_1st	PF24817	140 - 234	2.6e-08	WDHD1 first WD40 domain
Beta-prop_WDR19_1st	PF23389	144 - 245	1.2e-09	WDR19 first beta-propeller
WDR55	PF24796	149 - 260	4.8e-07	WDR55
Beta-prop_WDR3_1st	PF25173	151 - 251	1.3e-12	WDR3 first beta-propeller domain
WD40_Gbeta	PF25391	151 - 293	5.8e-10	G protein beta WD-40 repeat protein
Beta-prop_RIG_2nd	PF23775	152 - 236	6e-06	RIG second beta-propeller
Beta-prop_WDR5	PF25175	152 - 294	2.3e-18	WDR5 beta-propeller domain
WD40_Prp19	PF24814	154 - 234	8.9e-08	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	156 - 293	2e-19	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	158 - 306	5.6e-12	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	158 - 291	6.1e-10	WDR36/Utp21 first beta-propeller
WD40_MABP1-WDR62_2nd	PF24782	164 - 428	2.6e-08	MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd	PF25047	165 - 269	2e-10	TEP-1 second beta-propeller
ANAPC4_WD40	PF12894	177 - 233	5e-06	Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_WDR3_2nd	PF25172	185 - 305	1e-07	WDR3 second beta-propeller domain
WD40_Prp19	PF24814	232 - 428	2.8e-21	Prp19 WD40 domain
Beta-prop_WDR3_1st	PF25173	233 - 386	4.2e-19	WDR3 first beta-propeller domain
WD40_Gbeta	PF25391	251 - 429	2e-08	G protein beta WD-40 repeat protein
Beta-prop_WDR5	PF25175	255 - 373	1.5e-14	WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	256 - 353	1.5e-08	CAF1B/HIR1 beta-propeller domain
WD40	PF00400	257 - 292	1e-07	WD domain, G-beta repeat
Beta-prop_TEP1_2nd	PF25047	259 - 353	1e-05	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	263 - 373	1.1e-20	THOC3 beta-propeller domain
Beta-prop_EML	PF23409	310 - 431	8.6e-07	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_EML_2	PF23414	317 - 430	7.5e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd	PF25172	325 - 430	5.8e-08	WDR3 second beta-propeller domain
Beta-prop_WDR5	PF25175	336 - 430	1.2e-08	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	357 - 429	9.9e-06	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	358 - 429	1.4e-08	THOC3 beta-propeller domain
WD40	PF00400	393 - 428	7.2e-06	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011788)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35410 AT5G35410
fragaria_vesca	FvH4_1g03090 FvH4_1g03090 FvH4_1g03090
malus_domestica	MD02G1030100.v1.1 MD15G1171600.v1.1
prunus_persica	Prupe.7G244500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0088231
rosa_laevigata	RLG00000015934
rosa_multiflora	Rmu_sc0004235.1_g000049
rosa_roxburghii	Rroxscaffold_2G00152820
rosa_rugosa	Rorug01G0482000 Rorug01G0482000 Rorug01G0482100 Rorug01G0482200
rosa_samantha	Rh2AG037200 Rh2BG036400
rosa_wichuraiana	Rw2G002920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	147
AccI	GTMKAC	1 cut(s)	1059
AccII	CGCG	1 cut(s)	673
AccIII	TCCGGA	1 cut(s)	1228
AciI	CCGC	2 cut(s)	253, 1253
AclWI	GGATC	3 cut(s)	19, 306, 753
AcsI	RAATTY	1 cut(s)	19
AcyI	GRCGYC	1 cut(s)	577
AfaI	GTAC	4 cut(s)	305, 453, 612, 1160
AfiI	CCNNNNNNNGG	5 cut(s)	222, 381, 957, 1168, 1303
AgsI	TTSAA	4 cut(s)	244, 274, 926, 1051
AhdI	GACNNNNNGTC	1 cut(s)	1066
AjnI	CCWGG	3 cut(s)	206, 353, 1202
AjuI	GAANNNNNNNTTGG	2 cut(s)	302, 334
AluBI	AGCT	7 cut(s)	616, 643, 938, 1119, 1144, 1316, 1325
AluI	AGCT	7 cut(s)	616, 643, 938, 1119, 1144, 1316, 1325
Alw26I	GTCTC	4 cut(s)	352, 515, 767, 1074
AlwI	GGATC	3 cut(s)	19, 306, 753
AlwNI	CAGNNNCTG	3 cut(s)	824, 941, 1256
Ama87I	CYCGRG	1 cut(s)	90
Aor13HI	TCCGGA	1 cut(s)	1228
AoxI	GGCC	3 cut(s)	52, 213, 288
ApeKI	GCWGC	3 cut(s)	640, 829, 938
ApoI	RAATTY	1 cut(s)	19
Asp700I	GAANNNNTTC	1 cut(s)	85
AspLEI	GCGC	2 cut(s)	148, 1043
AspS9I	GGNCC	3 cut(s)	53, 289, 542
AsuC2I	CCSGG	1 cut(s)	293
AsuHPI	GGTGA	2 cut(s)	1016, 1271
AsuNHI	GCTAGC	1 cut(s)	494
AvaI	CYCGRG	1 cut(s)	90
AvaII	GGWCC	1 cut(s)	542
AxyI	CCTNAGG	1 cut(s)	1299
BanII	GRGCYC	1 cut(s)	568
BbvCI	CCTCAGC	1 cut(s)	644
BbvI	GCAGC	3 cut(s)	652, 841, 925
BccI	CCATC	4 cut(s)	211, 566, 1171, 1226
BceAI	ACGGC	1 cut(s)	742
BciT130I	CCWGG	3 cut(s)	208, 355, 1204
BcnI	CCSGG	1 cut(s)	293
BcoDI	GTCTC	4 cut(s)	352, 515, 767, 1074
BfaI	CTAG	1 cut(s)	495
BisI	GCNGC	4 cut(s)	641, 830, 939, 1254
BlpI	GCTNAGC	1 cut(s)	1115
BlsI	GCNGC	4 cut(s)	642, 831, 940, 1255
Bme1390I	CCNGG	4 cut(s)	208, 293, 355, 1204
Bme18I	GGWCC	1 cut(s)	542
BmeRI	GACNNNNNGTC	1 cut(s)	1066
BmeT110I	CYCGRG	1 cut(s)	90
BmgT120I	GGNCC	3 cut(s)	53, 289, 542
BmiI	GGNNCC	2 cut(s)	291, 567
BmrFI	CCNGG	4 cut(s)	208, 293, 355, 1204
BmrI	ACTGGG	1 cut(s)	1074
BmsI	GCATC	4 cut(s)	382, 481, 896, 1256
BmtI	GCTAGC	1 cut(s)	498
BmuI	ACTGGG	1 cut(s)	1074
BpmI	CTGGAG	2 cut(s)	31, 735
Bpu10I	CCTNAGC	1 cut(s)	644
Bpu1102I	GCTNAGC	1 cut(s)	1115
BpuMI	CCSGG	1 cut(s)	293
BsaHI	GRCGYC	1 cut(s)	577
BsaI	GGTCTC	1 cut(s)	1074
BsaJI	CCNNGG	5 cut(s)	207, 291, 353, 1167, 1203
BsaWI	WCCGGW	2 cut(s)	989, 1228
Bsc4I	CCNNNNNNNGG	5 cut(s)	222, 381, 957, 1168, 1303
Bse1I	ACTGG	5 cut(s)	505, 544, 552, 718, 1069
Bse21I	CCTNAGG	1 cut(s)	1299
Bse3DI	GCAATG	2 cut(s)	135, 582
BseAI	TCCGGA	1 cut(s)	1228
BseBI	CCWGG	3 cut(s)	208, 355, 1204
BseDI	CCNNGG	5 cut(s)	207, 291, 353, 1167, 1203
BseGI	GGATG	7 cut(s)	10, 26, 203, 397, 496, 1163, 1237
BseLI	CCNNNNNNNGG	5 cut(s)	222, 381, 957, 1168, 1303
BseMI	GCAATG	2 cut(s)	135, 582
BseMII	CTCAG	7 cut(s)	390, 635, 1068, 1085, 1235, 1262, 1290
BseNI	ACTGG	5 cut(s)	505, 544, 552, 718, 1069
BseXI	GCAGC	3 cut(s)	652, 841, 925
Bsh1236I	CGCG	1 cut(s)	673
BshFI	GGCC	3 cut(s)	54, 215, 290
BsiHKCI	CYCGRG	1 cut(s)	90
BsiSI	CCGG	4 cut(s)	287, 293, 990, 1229
BslFI	GGGAC	3 cut(s)	635, 887, 1280
BslI	CCNNNNNNNGG	5 cut(s)	222, 381, 957, 1168, 1303
BsmAI	GTCTC	4 cut(s)	352, 515, 767, 1074
BsmFI	GGGAC	3 cut(s)	635, 887, 1280
BsnI	GGCC	3 cut(s)	54, 215, 290
Bso31I	GGTCTC	1 cut(s)	1074
BsoBI	CYCGRG	1 cut(s)	90
Bsp1286I	GDGCHC	1 cut(s)	568
Bsp13I	TCCGGA	1 cut(s)	1228
Bsp143I	GATC	7 cut(s)	11, 122, 298, 758, 878, 928, 1006
Bsp1720I	GCTNAGC	1 cut(s)	1115
Bsp19I	CCATGG	1 cut(s)	1167
Bsp68I	TCGCGA	1 cut(s)	673
BspACI	CCGC	2 cut(s)	253, 1253
BspANI	GGCC	3 cut(s)	54, 215, 290
BspCNI	CTCAG	7 cut(s)	389, 636, 1067, 1084, 1234, 1263, 1291
BspEI	TCCGGA	1 cut(s)	1228
BspFNI	CGCG	1 cut(s)	673
BspLI	GGNNCC	2 cut(s)	291, 567
BspOI	GCTAGC	1 cut(s)	498
BspPI	GGATC	3 cut(s)	19, 306, 753
BspTNI	GGTCTC	1 cut(s)	1074
BsrDI	GCAATG	2 cut(s)	135, 582
BsrI	ACTGG	5 cut(s)	505, 544, 552, 718, 1069
BssECI	CCNNGG	5 cut(s)	207, 291, 353, 1167, 1203
BssMI	GATC	7 cut(s)	11, 122, 298, 758, 878, 928, 1006
BssNI	GRCGYC	1 cut(s)	577
BssT1I	CCWWGG	1 cut(s)	1167
Bst2UI	CCWGG	3 cut(s)	208, 355, 1204
Bst4CI	ACNGT	7 cut(s)	69, 478, 668, 897, 909, 1243, 1355
Bst6I	CTCTTC	1 cut(s)	328
BstACI	GRCGYC	1 cut(s)	577
BstAPI	GCANNNNNTGC	1 cut(s)	154
BstC8I	GCNNGC	4 cut(s)	345, 496, 984, 1045
BstDEI	CTNAG	9 cut(s)	376, 636, 644, 1054, 1071, 1115, 1221, 1271, 1299
BstDSI	CCRYGG	1 cut(s)	1167
BstENI	CCTNNNNNAGG	2 cut(s)	220, 379
BstF5I	GGATG	7 cut(s)	10, 26, 203, 397, 496, 1163, 1237
BstFNI	CGCG	1 cut(s)	673
BstHHI	GCGC	2 cut(s)	148, 1043
BstKTI	GATC	7 cut(s)	14, 125, 301, 761, 881, 931, 1009
BstMAI	GTCTC	4 cut(s)	352, 515, 767, 1074
BstMBI	GATC	7 cut(s)	11, 122, 298, 758, 878, 928, 1006
BstMWI	GCNNNNNNNGC	7 cut(s)	154, 349, 919, 947, 1253, 1313, 1322
BstNI	CCWGG	3 cut(s)	208, 355, 1204
BstNSI	RCATGY	1 cut(s)	1047
BstSCI	CCNGG	4 cut(s)	206, 291, 353, 1202
BstUI	CGCG	1 cut(s)	673
BstV1I	GCAGC	3 cut(s)	652, 841, 925
BstX2I	RGATCY	2 cut(s)	298, 758
BstYI	RGATCY	2 cut(s)	298, 758
Bsu36I	CCTNAGG	1 cut(s)	1299
BsuRI	GGCC	3 cut(s)	54, 215, 290
BtgI	CCRYGG	1 cut(s)	1167
BtsCI	GGATG	7 cut(s)	10, 26, 203, 397, 496, 1163, 1237
BtsIMutI	CAGTG	4 cut(s)	498, 559, 914, 1062
BtuMI	TCGCGA	1 cut(s)	673
Cac8I	GCNNGC	4 cut(s)	345, 496, 984, 1045
CaiI	CAGNNNCTG	3 cut(s)	824, 941, 1256
CfoI	GCGC	2 cut(s)	148, 1043
Cfr13I	GGNCC	3 cut(s)	53, 289, 542
CseI	GACGC	1 cut(s)	585
Csp6I	GTAC	4 cut(s)	304, 452, 611, 1159
CviAII	CATG	5 cut(s)	247, 690, 788, 1044, 1168
CviQI	GTAC	4 cut(s)	304, 452, 611, 1159
DdeI	CTNAG	9 cut(s)	376, 636, 644, 1054, 1071, 1115, 1221, 1271, 1299
DpnI	GATC	7 cut(s)	13, 124, 300, 760, 880, 930, 1008
DpnII	GATC	7 cut(s)	11, 122, 298, 758, 878, 928, 1006
DriI	GACNNNNNGTC	1 cut(s)	1066
Eam1104I	CTCTTC	1 cut(s)	328
Eam1105I	GACNNNNNGTC	1 cut(s)	1066
EarI	CTCTTC	1 cut(s)	328
Eco130I	CCWWGG	1 cut(s)	1167
Eco147I	AGGCCT	1 cut(s)	215
Eco24I	GRGCYC	1 cut(s)	568
Eco31I	GGTCTC	1 cut(s)	1074
Eco47I	GGWCC	1 cut(s)	542
Eco81I	CCTNAGG	1 cut(s)	1299
Eco88I	CYCGRG	1 cut(s)	90
EcoNI	CCTNNNNNAGG	2 cut(s)	220, 379
EcoO109I	RGGNCCY	1 cut(s)	53
EcoRI	GAATTC	1 cut(s)	19
EcoRII	CCWGG	3 cut(s)	206, 353, 1202
EcoT14I	CCWWGG	1 cut(s)	1167
EcoT38I	GRGCYC	1 cut(s)	568
ErhI	CCWWGG	1 cut(s)	1167
FaeI	CATG	5 cut(s)	250, 693, 791, 1047, 1171
FaqI	GGGAC	3 cut(s)	635, 887, 1280
FatI	CATG	5 cut(s)	246, 689, 787, 1043, 1167
FauNDI	CATATG	1 cut(s)	1347
FblI	GTMKAC	1 cut(s)	1059
Fnu4HI	GCNGC	4 cut(s)	641, 830, 939, 1254
FokI	GGATG	7 cut(s)	13, 17, 190, 404, 503, 1150, 1244
FriOI	GRGCYC	1 cut(s)	568
Fsp4HI	GCNGC	4 cut(s)	641, 830, 939, 1254
FspBI	CTAG	1 cut(s)	495
FspI	TGCGCA	1 cut(s)	147
GlaI	GCGC	2 cut(s)	147, 1042
GluI	GCNGC	4 cut(s)	641, 830, 939, 1254
GsuI	CTGGAG	2 cut(s)	31, 735
HaeIII	GGCC	3 cut(s)	54, 215, 290
HapII	CCGG	4 cut(s)	287, 293, 990, 1229
HgaI	GACGC	1 cut(s)	585
HhaI	GCGC	2 cut(s)	148, 1043
Hin1I	GRCGYC	1 cut(s)	577
Hin1II	CATG	5 cut(s)	250, 693, 791, 1047, 1171
Hin6I	GCGC	2 cut(s)	146, 1041
HinP1I	GCGC	2 cut(s)	146, 1041
HincII	GTYRAC	1 cut(s)	739
HindII	GTYRAC	1 cut(s)	739
HinfI	GANTC	6 cut(s)	108, 262, 623, 1147, 1225, 1275
HpaII	CCGG	4 cut(s)	287, 293, 990, 1229
HphI	GGTGA	2 cut(s)	1016, 1271
Hpy166II	GTNNAC	5 cut(s)	481, 739, 806, 1060, 1131
Hpy188I	TCNGA	9 cut(s)	78, 222, 261, 379, 514, 607, 1224, 1333, 1361
Hpy8I	GTNNAC	5 cut(s)	481, 739, 806, 1060, 1131
HpyCH4III	ACNGT	7 cut(s)	69, 478, 668, 897, 909, 1243, 1355
HpyCH4V	TGCA	6 cut(s)	8, 61, 865, 887, 1014, 1239
HpyF10VI	GCNNNNNNNGC	7 cut(s)	154, 349, 919, 947, 1253, 1313, 1322
HpyF3I	CTNAG	9 cut(s)	376, 636, 644, 1054, 1071, 1115, 1221, 1271, 1299
Hsp92I	GRCGYC	1 cut(s)	577
Hsp92II	CATG	5 cut(s)	250, 693, 791, 1047, 1171
HspAI	GCGC	2 cut(s)	146, 1041
Kpn2I	TCCGGA	1 cut(s)	1228
Kzo9I	GATC	7 cut(s)	11, 122, 298, 758, 878, 928, 1006
LmnI	GCTCC	3 cut(s)	400, 571, 1321
Lsp1109I	GCAGC	3 cut(s)	652, 841, 925
LweI	GCATC	4 cut(s)	382, 481, 896, 1256
MaeI	CTAG	1 cut(s)	495
MaeIII	GTNAC	2 cut(s)	547, 1193
MalI	GATC	7 cut(s)	13, 124, 300, 760, 880, 930, 1008
MboI	GATC	7 cut(s)	11, 122, 298, 758, 878, 928, 1006
MboII	GAAGA	5 cut(s)	15, 310, 315, 882, 938
MfeI	CAATTG	2 cut(s)	459, 833
MflI	RGATCY	2 cut(s)	298, 758
MhlI	GDGCHC	1 cut(s)	568
MluCI	AATT	6 cut(s)	19, 227, 459, 515, 601, 833
MlyI	GAGTC	3 cut(s)	617, 1141, 1234
MmeI	TCCRAC	2 cut(s)	54, 411
MroI	TCCGGA	1 cut(s)	1228
MroXI	GAANNNNTTC	1 cut(s)	85
MseI	TTAA	4 cut(s)	597, 810, 945, 1173
MslI	CAYNNNNRTG	1 cut(s)	688
MspA1I	CMGCKG	4 cut(s)	643, 938, 1144, 1253
MspI	CCGG	4 cut(s)	287, 293, 990, 1229
MspR9I	CCNGG	4 cut(s)	208, 293, 355, 1204
MunI	CAATTG	2 cut(s)	459, 833
MvaI	CCWGG	3 cut(s)	208, 355, 1204
MvnI	CGCG	1 cut(s)	673
MwoI	GCNNNNNNNGC	7 cut(s)	154, 349, 919, 947, 1253, 1313, 1322
NciI	CCSGG	1 cut(s)	293
NcoI	CCATGG	1 cut(s)	1167
NdeI	CATATG	1 cut(s)	1347
NdeII	GATC	7 cut(s)	11, 122, 298, 758, 878, 928, 1006
NheI	GCTAGC	1 cut(s)	494
NlaIII	CATG	5 cut(s)	250, 693, 791, 1047, 1171
NlaIV	GGNNCC	2 cut(s)	291, 567
NmuCI	GTSAC	1 cut(s)	1193
NruI	TCGCGA	1 cut(s)	673
NsbI	TGCGCA	1 cut(s)	147
NspI	RCATGY	1 cut(s)	1047
PaeI	GCATGC	1 cut(s)	1047
PceI	AGGCCT	1 cut(s)	215
PdmI	GAANNNNTTC	1 cut(s)	85
PfeI	GAWTC	3 cut(s)	108, 262, 1275
PflFI	GACNNNGTC	1 cut(s)	404
PkrI	GCNGC	4 cut(s)	642, 831, 940, 1255
PleI	GAGTC	3 cut(s)	617, 1141, 1233
PpsI	GAGTC	3 cut(s)	617, 1141, 1233
Psp6I	CCWGG	3 cut(s)	206, 353, 1202
PspGI	CCWGG	3 cut(s)	206, 353, 1202
PspN4I	GGNNCC	2 cut(s)	291, 567
PspPI	GGNCC	3 cut(s)	53, 289, 542
PstNI	CAGNNNCTG	3 cut(s)	824, 941, 1256
PsuI	RGATCY	2 cut(s)	298, 758
PsyI	GACNNNGTC	1 cut(s)	404
PvuII	CAGCTG	3 cut(s)	643, 938, 1144
RruI	TCGCGA	1 cut(s)	673
RsaI	GTAC	4 cut(s)	305, 453, 612, 1160
RsaNI	GTAC	4 cut(s)	304, 452, 611, 1159
RseI	CAYNNNNRTG	1 cut(s)	688
SaqAI	TTAA	4 cut(s)	597, 810, 945, 1173
SatI	GCNGC	4 cut(s)	641, 830, 939, 1254
Sau3AI	GATC	7 cut(s)	11, 122, 298, 758, 878, 928, 1006
Sau96I	GGNCC	3 cut(s)	53, 289, 542
SchI	GAGTC	3 cut(s)	617, 1141, 1234
ScrFI	CCNGG	4 cut(s)	208, 293, 355, 1204
SduI	GDGCHC	1 cut(s)	568
SfaNI	GCATC	4 cut(s)	382, 481, 896, 1256
SinI	GGWCC	1 cut(s)	542
SmiMI	CAYNNNNRTG	1 cut(s)	688
SphI	GCATGC	1 cut(s)	1047
Sse9I	AATT	6 cut(s)	19, 227, 459, 515, 601, 833
SseBI	AGGCCT	1 cut(s)	215
SsiI	CCGC	2 cut(s)	253, 1253
SspMI	CTAG	1 cut(s)	495
StuI	AGGCCT	1 cut(s)	215
StyD4I	CCNGG	4 cut(s)	206, 291, 353, 1202
StyI	CCWWGG	1 cut(s)	1167
TaaI	ACNGT	7 cut(s)	69, 478, 668, 897, 909, 1243, 1355
TaqI	TCGA	1 cut(s)	408
TasI	AATT	6 cut(s)	19, 227, 459, 515, 601, 833
TatI	WGTACW	2 cut(s)	451, 610
TauI	GCSGC	1 cut(s)	1256
TfiI	GAWTC	3 cut(s)	108, 262, 1275
Tru1I	TTAA	4 cut(s)	597, 810, 945, 1173
Tru9I	TTAA	4 cut(s)	597, 810, 945, 1173
TscAI	CASTG	4 cut(s)	505, 559, 914, 1069
TseFI	GTSAC	1 cut(s)	1193
TseI	GCWGC	3 cut(s)	640, 829, 938
Tsp45I	GTSAC	1 cut(s)	1193
TspDTI	ATGAA	9 cut(s)	15, 32, 61, 100, 263, 549, 1116, 1278, 1364
TspRI	CASTG	4 cut(s)	505, 559, 914, 1069
Tth111I	GACNNNGTC	1 cut(s)	404
VpaK11BI	GGWCC	1 cut(s)	542
XagI	CCTNNNNNAGG	2 cut(s)	220, 379
XapI	RAATTY	1 cut(s)	19
XceI	RCATGY	1 cut(s)	1047
XcmI	CCANNNNNNNNNTGG	2 cut(s)	587, 1174
XmiI	GTMKAC	1 cut(s)	1059
XmnI	GAANNNNTTC	1 cut(s)	85
XspI	CTAG	1 cut(s)	495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.