FvH4_1g05440

Plant protein of unknown function (DUF936)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0011282
Physical Location & Seq
Forward (+)
2876028 .. 2878847
2820 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05440.t1

Sequence Viewer

Length: 2106 bp
ATGGCGTCACCCACTCCCGGAATCCTCCTCCGTCTCCTCCAGTCCATGAACTCCGCCACCAAAGTCACCGGCGACCACCGCTCCGCCCTCCTCCAAGTCATCGGCATCGTCCCCGCCCTAACCGCCTCCGACGACCTCTGGCCCAACCACGGCTTCTTCGTCCAGCTCTCCGACTCCCTCAACTCCACCTACGTCTCCCTCTCCGAAAAAGACACCGATCTCATCCTCGCCAACCGCCTCCAGCTCGGCCAGTTCGTCTACGTCGACCGCTTCGACTTCGACGCGCCCGTGCCGCGCGTGGCCGGCATACGCCCCATCGCGGGGCGCCACGCCTTCGTCGGAGTCCCCGAGCCGCTCGTGGCGCGGATCTCGGCCTCCAAAAGAGAATTCGTGATCCAGCCGGTGTCGGAATCCGACCAGTCAGCCGACTTCATGGCGATTTATCTCTCGAATAACAAGAAGCCGGAGCCGCCGGCGAGGGCGGAGGTCAAGGAGGCGAAGATCGAGAAGGGGAAATCGCCGCGGCGGCAGCCGTTTGCGAATAGGGAGAATAATGTGGGAGGGAATGTGAACTCCGACGAGGTCAAGAAGGTCCCAGATCGGCCGGTGGCGGCGAGATTCTCTTCTCCGGCGACGGCGAAGAGGTCCGCTTCCGCCGGGAAGAAGAATGTGGCGGTAGCTCCGGCGGAGAGGGATCCGTCGCCGGCCGGGAAAGGGAAGAGATCGTCGTCTCCGGCGCCGTCGAAATGTGTTGTTCCGAGCCTGATGGTGGCGCGTGAAGAGAACAGGAAGGTGGCCAAGGAGCCCTCGATTATTGTGCCGTCGAGGTACCGGCAGCCGTCGCCGATTGGGGGGCGGAGGCAGGCGTCGCCGAATCCGAGAAGGGCTTCGATATCTCCGGGGAGGAGATTGTCTGTTGGAGGAGCAAAGGACTCTGCTGCAAGGAAGAAAATGGCTTCAATTGTTGCCGGAATTTCGAAGATTTCGGATACAATTTCGGGTTCTGGTAAGAATAATCGGAAGGGATGGGATGAGTCGCCTGCCGTGGAGCAAAAGGAGAAGCCTTTGTCAAAGAATAAACCAGATGTGCAATCAATTTTGAGAACTCAGGCTGCGCTTTCGAGACGATTAAGTGATGCGAAAACGACCAGTGATGATTGTTTGAGTGTGAAATCGAAAGCAAGCTCACATGAAGATAGCCCGGTGCAAGAGAAGCCATGCTATGCAGCTCTGGGTATTACTGTGCATGAAAGGAAATGGACTGATGGAAGTGTTCCATTAGATGGAGTCTCTGCTGACCTTGCAAGGCTTGGGAAGGAAGCTATGCAAAGGAAGGCACTTGCTGCTGCAGCGGCAGCTGAAGCACTAGAGGAGGCCATTGCTACAGAATCTCTTGTTAGGAAATTAAGCATGTTTGCAGAACTGTCTTCCATATCAAAGGTTGGGAATCCTTTACCTGCAATTGACCGGTTCTTTTCGATTTATGATGATGTTGTTAAATCAACAACAAGTCTTGAATCAATTGCCAGCAACCGCAATTCTGATTCACTTTGTGATAGCATTCCAACTGAGCAATCCAAATCTGTTTCTCTTTGGGTTGAAGCTGCATTGGCTACTGATCTTGGAGTTGTCTCTCTTCTTGGCCCTCAAGATCATGAGTCTCCACCCACTCTGCAGAAAAGTTTGTCAACAAGACAATCTCTCAACGCACCTGCCAAAGCCAATTTGAAGATCACTCAGTCCAATGCTCATGCTGGGGGGTGGAAGAAGGGTAATGGAATGAGAGAGACTGTGGAGCTTGCAAAGAACTTGCAGTCGGAGATGCAAATGTGGTTTCTACAGTTTGTTGAGAAAGCCATGGATGCTGGTTTTCGGGTGTTTGGAGAATGTGCTGCAGATGGTGGGAAGTTACCTCTAGACTGTGGCTCCATTGCAGCTGTCCTGTCACAGTTGAAGCGAGTTAATGAGTGGTTGGATCGAGTTGTATCGAAAAGGGATGATCTACTGAATGAAAAGGTTGATCGGCTCAAGAGAAAGATCTATGGCTTTGTCATTCAACATGTTGGGACGACGTTTGACAATTCCTCACCTCGTGCTTCATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF936

Protein Analysis

702

Amino Acids

75.59

Weight (kDa)

9.63

Isoelectric Point (pI)

53.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF936 PF06075 5 - 121 4.6e-52 Plant protein of unknown function (DUF936)
DUF6857 PF21647 414 - 694 1.6e-95 Domain of unknown function (DUF6857)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011282)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G13370
fragaria_vesca FvH4_1g05440 FvH4_1g05440
malus_domestica MD02G1062500.v1.1 MD15G1190300.v1.1 MD17G1097200.v1.1
prunus_persica Prupe.7G226800_v2.0.a1
pyrus_communis pycom02g04340 pycom15g17050
rosa_chinensis RchiOBHm_Chr2g0091101
rosa_laevigata RLG00000016180
rosa_multiflora Rmu_sc0004851.1_g000007 Rmu_sc0005171.1_g000002
rosa_roxburghii Rroxscaffold_2G00150540
rosa_rugosa Rorug02G0013000
rosa_samantha Rh2AG059200 Rh2BG057600 Rh2CG059500 Rh2DG058600
rosa_wichuraiana Rw2G005050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1720
Acc36I ACCTGC 2 cut(s) 1465, 1720
Acc65I GGTACC 1 cut(s) 828
AccB1I GGYRCC 3 cut(s) 324, 736, 828
AccB7I CCANNNNNTGG 1 cut(s) 1283
AccBSI CCGCTC 2 cut(s) 81, 355
AccI GTMKAC 2 cut(s) 258, 264
AccII CGCG 7 cut(s) 284, 295, 297, 320, 364, 523, 775
AclWI GGATC 5 cut(s) 374, 388, 689, 702, 1983
AcoI YGGCCR 5 cut(s) 247, 300, 602, 705, 795
AcsI RAATTY 2 cut(s) 386, 972
AcuI CTGAAG 1 cut(s) 1380
AcyI GRCGYC 4 cut(s) 5, 325, 737, 866
AdeI CACNNNGTG 2 cut(s) 1553, 2093
AfaI GTAC 1 cut(s) 830
AfiI CCNNNNNNNGG 9 cut(s) 17, 149, 319, 320, 321, 714, 769, 851, 1283
AflIII ACRYGT 1 cut(s) 2059
AgeI ACCGGT 1 cut(s) 1467
AgsI TTSAA 6 cut(s) 960, 1517, 1601, 1729, 1954, 2057
AjuI GAANNNNNNNTTGG 4 cut(s) 137, 169, 371, 403
Alw26I GTCTC 8 cut(s) 38, 199, 735, 1117, 1294, 1636, 1665, 1781
AlwI GGATC 5 cut(s) 374, 388, 689, 702, 1983
Ama87I CYCGRG 1 cut(s) 347
AoxI GGCC 9 cut(s) 140, 247, 300, 372, 602, 705, 795, 1374, 1642
ApoI RAATTY 2 cut(s) 386, 972
AsiGI ACCGGT 1 cut(s) 1467
Asp700I GAANNNNTTC 1 cut(s) 886
Asp718I GGTACC 1 cut(s) 828
AspLEI GCGC 7 cut(s) 286, 297, 327, 364, 739, 775, 1117
AspS9I GGNCC 4 cut(s) 141, 592, 645, 1643
AsuC2I CCSGG 5 cut(s) 18, 658, 709, 900, 1202
AsuHPI GGTGA 2 cut(s) 58, 2079
AsuII TTCGAA 1 cut(s) 977
AvaI CYCGRG 1 cut(s) 347
AvaII GGWCC 2 cut(s) 592, 645
BalI TGGCCA 1 cut(s) 797
BamHI GGATCC 1 cut(s) 694
BanI GGYRCC 3 cut(s) 324, 736, 828
BanII GRGCYC 1 cut(s) 807
BauI CACGAG 2 cut(s) 356, 2091
BbsI GAAGAC 1 cut(s) 1419
BccI CCATC 6 cut(s) 323, 760, 1020, 1259, 1277, 1892
BceAI ACGGC 7 cut(s) 166, 517, 651, 724, 805, 823, 1028
BcgI CGANNNNNNTGC 2 cut(s) 799, 833
BciVI GTATCC 1 cut(s) 982
BcnI CCSGG 5 cut(s) 18, 658, 709, 900, 1202
BcoDI GTCTC 8 cut(s) 38, 199, 735, 1117, 1294, 1636, 1665, 1781
BfaI CTAG 2 cut(s) 1367, 1916
BfmI CTRYAG 5 cut(s) 1347, 1383, 1673, 1838, 1893
BfoI RGCGCY 2 cut(s) 328, 740
BfuAI ACCTGC 2 cut(s) 1465, 1720
BfuI GTATCC 1 cut(s) 982
BglI GCCNNNNNGGC 1 cut(s) 526
BglII AGATCT 1 cut(s) 2037
Bme1390I CCNGG 5 cut(s) 18, 658, 709, 900, 1202
Bme18I GGWCC 2 cut(s) 592, 645
BmeT110I CYCGRG 1 cut(s) 347
BmgT120I GGNCC 4 cut(s) 141, 592, 645, 1643
BmiI GGNNCC 8 cut(s) 326, 468, 594, 696, 738, 804, 830, 1927
BmrFI CCNGG 5 cut(s) 18, 658, 709, 900, 1202
BmsI GCATC 4 cut(s) 114, 1126, 1812, 1852
BpiI GAAGAC 1 cut(s) 1419
BpmI CTGGAG 2 cut(s) 23, 224
Bpu14I TTCGAA 1 cut(s) 977
BpuEI CTTGAG 2 cut(s) 1632, 2012
BpuMI CCSGG 5 cut(s) 18, 658, 709, 900, 1202
BsaHI GRCGYC 4 cut(s) 5, 325, 737, 866
BsaJI CCNNGG 6 cut(s) 148, 521, 798, 899, 1044, 1857
BsaWI WCCGGW 1 cut(s) 1467
BsaXI ACNNNNNCTCC 6 cut(s) 65, 95, 552, 582, 1910, 1940
Bsc4I CCNNNNNNNGG 9 cut(s) 17, 149, 319, 320, 321, 714, 769, 851, 1283
Bse118I RCCGGY 8 cut(s) 68, 302, 400, 472, 604, 703, 831, 1467
Bse1I ACTGG 4 cut(s) 40, 250, 418, 1149
Bse3DI GCAATG 2 cut(s) 1377, 1929
BseDI CCNNGG 6 cut(s) 148, 521, 798, 899, 1044, 1857
BseGI GGATG 5 cut(s) 222, 1031, 1036, 1867, 2002
BseLI CCNNNNNNNGG 9 cut(s) 17, 149, 319, 320, 321, 714, 769, 851, 1283
BseMI GCAATG 2 cut(s) 1377, 1929
BseMII CTCAG 3 cut(s) 1121, 1560, 1751
BseNI ACTGG 4 cut(s) 40, 250, 418, 1149
BseRI GAGGAG 6 cut(s) 17, 26, 80, 919, 936, 1385
BseX3I CGGCCG 2 cut(s) 602, 705
BseYI CCCAGC 1 cut(s) 1754
Bsh1236I CGCG 7 cut(s) 284, 295, 297, 320, 364, 523, 775
Bsh1285I CGRYCG 3 cut(s) 268, 605, 708
BshFI GGCC 9 cut(s) 142, 249, 302, 374, 604, 707, 797, 1376, 1644
BshNI GGYRCC 3 cut(s) 324, 736, 828
BshTI ACCGGT 1 cut(s) 1467
BsiEI CGRYCG 3 cut(s) 268, 605, 708
BsiHKCI CYCGRG 1 cut(s) 347
BslFI GGGAC 4 cut(s) 95, 329, 578, 2080
BslI CCNNNNNNNGG 9 cut(s) 17, 149, 319, 320, 321, 714, 769, 851, 1283
BsmAI GTCTC 8 cut(s) 38, 199, 735, 1117, 1294, 1636, 1665, 1781
BsmBI CGTCTC 4 cut(s) 38, 199, 735, 1117
BsmFI GGGAC 4 cut(s) 95, 329, 578, 2080
BsmI GAATGC 1 cut(s) 1560
BsnI GGCC 9 cut(s) 142, 249, 302, 374, 604, 707, 797, 1376, 1644
BsoBI CYCGRG 1 cut(s) 347
Bsp119I TTCGAA 1 cut(s) 977
Bsp1286I GDGCHC 1 cut(s) 807
Bsp19I CCATGG 1 cut(s) 1857
BspANI GGCC 9 cut(s) 142, 249, 302, 374, 604, 707, 797, 1376, 1644
BspCNI CTCAG 3 cut(s) 1120, 1561, 1750
BspFNI CGCG 7 cut(s) 284, 295, 297, 320, 364, 523, 775
BspHI TCATGA 1 cut(s) 1654
BspLI GGNNCC 8 cut(s) 326, 468, 594, 696, 738, 804, 830, 1927
BspMAI CTGCAG 3 cut(s) 1351, 1677, 1897
BspMI ACCTGC 2 cut(s) 1465, 1720
BspPI GGATC 5 cut(s) 374, 388, 689, 702, 1983
BspT104I TTCGAA 1 cut(s) 977
BspT107I GGYRCC 3 cut(s) 324, 736, 828
BsrBI CCGCTC 2 cut(s) 81, 355
BsrDI GCAATG 2 cut(s) 1377, 1929
BsrFI RCCGGY 8 cut(s) 68, 302, 400, 472, 604, 703, 831, 1467
BsrI ACTGG 4 cut(s) 40, 250, 418, 1149
BssAI RCCGGY 8 cut(s) 68, 302, 400, 472, 604, 703, 831, 1467
BssECI CCNNGG 6 cut(s) 148, 521, 798, 899, 1044, 1857
BssNI GRCGYC 4 cut(s) 5, 325, 737, 866
BssSI CACGAG 2 cut(s) 356, 2091
BssT1I CCWWGG 2 cut(s) 798, 1857
Bst2BI CACGAG 2 cut(s) 356, 2091
Bst4CI ACNGT 6 cut(s) 1243, 1425, 1792, 1842, 1922, 1950
Bst6I CTCTTC 5 cut(s) 628, 635, 713, 774, 1641
BstACI GRCGYC 4 cut(s) 5, 325, 737, 866
BstAPI GCANNNNNTGC 1 cut(s) 1343
BstBI TTCGAA 1 cut(s) 977
BstC8I GCNNGC 8 cut(s) 304, 474, 705, 864, 1041, 1183, 1528, 1800
BstDEI CTNAG 3 cut(s) 1107, 1569, 1737
BstDSI CCRYGG 4 cut(s) 148, 521, 1044, 1857
BstF5I GGATG 5 cut(s) 222, 1031, 1036, 1867, 2002
BstFNI CGCG 7 cut(s) 284, 295, 297, 320, 364, 523, 775
BstH2I RGCGCY 2 cut(s) 328, 740
BstHHI GCGC 7 cut(s) 286, 297, 327, 364, 739, 775, 1117
BstMAI GTCTC 8 cut(s) 38, 199, 735, 1117, 1294, 1636, 1665, 1781
BstMCI CGRYCG 3 cut(s) 268, 605, 708
BstNSI RCATGY 2 cut(s) 1414, 2063
BstSCI CCNGG 5 cut(s) 16, 656, 707, 898, 1200
BstSFI CTRYAG 5 cut(s) 1347, 1383, 1673, 1838, 1893
BstUI CGCG 7 cut(s) 284, 295, 297, 320, 364, 523, 775
BstV2I GAAGAC 1 cut(s) 1419
BstX2I RGATCY 3 cut(s) 366, 694, 2037
BstYI RGATCY 3 cut(s) 366, 694, 2037
BstZI CGGCCG 2 cut(s) 602, 705
BsuI GTATCC 1 cut(s) 982
BsuRI GGCC 9 cut(s) 142, 249, 302, 374, 604, 707, 797, 1376, 1644
BtgI CCRYGG 4 cut(s) 148, 521, 1044, 1857
BtgZI GCGATG 1 cut(s) 301
BtsCI GGATG 5 cut(s) 222, 1031, 1036, 1867, 2002
BtsIMutI CAGTG 1 cut(s) 1156
BveI ACCTGC 2 cut(s) 1465, 1720
Cac8I GCNNGC 8 cut(s) 304, 474, 705, 864, 1041, 1183, 1528, 1800
CciI TCATGA 1 cut(s) 1654
CfoI GCGC 7 cut(s) 286, 297, 327, 364, 739, 775, 1117
Cfr10I RCCGGY 8 cut(s) 68, 302, 400, 472, 604, 703, 831, 1467
Cfr13I GGNCC 4 cut(s) 141, 592, 645, 1643
Cfr42I CCGCGG 1 cut(s) 524
CseI GACGC 2 cut(s) 290, 855
Csp6I GTAC 1 cut(s) 829
CspAI ACCGGT 1 cut(s) 1467
CviQI GTAC 1 cut(s) 829
DdeI CTNAG 3 cut(s) 1107, 1569, 1737
DinI GGCGCC 2 cut(s) 326, 738
DraIII CACNNNGTG 2 cut(s) 1553, 2093
EaeI YGGCCR 5 cut(s) 247, 300, 602, 705, 795
EagI CGGCCG 2 cut(s) 602, 705
Eam1104I CTCTTC 5 cut(s) 628, 635, 713, 774, 1641
EarI CTCTTC 5 cut(s) 628, 635, 713, 774, 1641
EciI GGCGGA 6 cut(s) 43, 73, 497, 643, 701, 871
EclXI CGGCCG 2 cut(s) 602, 705
Eco130I CCWWGG 2 cut(s) 798, 1857
Eco24I GRGCYC 1 cut(s) 807
Eco32I GATATC 1 cut(s) 894
Eco47I GGWCC 2 cut(s) 592, 645
Eco52I CGGCCG 2 cut(s) 602, 705
Eco57I CTGAAG 1 cut(s) 1380
Eco88I CYCGRG 1 cut(s) 347
EcoO109I RGGNCCY 1 cut(s) 592
EcoRI GAATTC 1 cut(s) 386
EcoRV GATATC 1 cut(s) 894
EcoT14I CCWWGG 2 cut(s) 798, 1857
EcoT38I GRGCYC 1 cut(s) 807
EgeI GGCGCC 2 cut(s) 326, 738
EheI GGCGCC 2 cut(s) 326, 738
ErhI CCWWGG 2 cut(s) 798, 1857
Esp3I CGTCTC 4 cut(s) 38, 199, 735, 1117
FaqI GGGAC 4 cut(s) 95, 329, 578, 2080
FauI CCCGC 2 cut(s) 121, 313
FblI GTMKAC 2 cut(s) 258, 264
FokI GGATG 5 cut(s) 209, 1038, 1043, 1874, 2009
FriOI GRGCYC 1 cut(s) 807
FspBI CTAG 2 cut(s) 1367, 1916
GlaI GCGC 7 cut(s) 285, 296, 326, 363, 738, 774, 1116
GsaI CCCAGC 1 cut(s) 1758
GsuI CTGGAG 2 cut(s) 23, 224
HaeII RGCGCY 2 cut(s) 328, 740
HaeIII GGCC 9 cut(s) 142, 249, 302, 374, 604, 707, 797, 1376, 1644
HgaI GACGC 2 cut(s) 290, 855
HhaI GCGC 7 cut(s) 286, 297, 327, 364, 739, 775, 1117
Hin1I GRCGYC 4 cut(s) 5, 325, 737, 866
Hin6I GCGC 7 cut(s) 284, 295, 325, 362, 737, 773, 1115
HinP1I GCGC 7 cut(s) 284, 295, 325, 362, 737, 773, 1115
HincII GTYRAC 2 cut(s) 265, 1689
HindII GTYRAC 2 cut(s) 265, 1689
HphI GGTGA 2 cut(s) 58, 2079
Hpy166II GTNNAC 4 cut(s) 259, 265, 571, 1689
Hpy8I GTNNAC 4 cut(s) 259, 265, 571, 1689
HpyAV CCTTC 9 cut(s) 343, 502, 583, 784, 876, 1015, 1309, 1327, 1762
HpyCH4III ACNGT 6 cut(s) 1243, 1425, 1792, 1842, 1922, 1950
HpyCH4IV ACGT 3 cut(s) 192, 261, 2072
HpyF3I CTNAG 3 cut(s) 1107, 1569, 1737
HpySE526I ACGT 3 cut(s) 192, 261, 2072
Hsp92I GRCGYC 4 cut(s) 5, 325, 737, 866
HspAI GCGC 7 cut(s) 284, 295, 325, 362, 737, 773, 1115
KasI GGCGCC 2 cut(s) 324, 736
KpnI GGTACC 1 cut(s) 832
KroI GCCGGC 3 cut(s) 302, 472, 703
KroNI GCCGGC 3 cut(s) 304, 474, 705
KspI CCGCGG 1 cut(s) 524
LmnI GCTCC 8 cut(s) 86, 466, 685, 802, 923, 1048, 1795, 1931
LweI GCATC 4 cut(s) 114, 1126, 1812, 1852
MaeI CTAG 2 cut(s) 1367, 1916
MaeII ACGT 3 cut(s) 192, 261, 2072
MaeIII GTNAC 4 cut(s) 6, 64, 1908, 1944
MbiI CCGCTC 2 cut(s) 81, 355
MfeI CAATTG 3 cut(s) 960, 1461, 1521
MflI RGATCY 3 cut(s) 366, 694, 2037
MhlI GDGCHC 1 cut(s) 807
MlsI TGGCCA 1 cut(s) 797
MluNI TGGCCA 1 cut(s) 797
Mly113I GGCGCC 2 cut(s) 325, 737
MlyI GAGTC 6 cut(s) 167, 351, 926, 1043, 1296, 1667
Mox20I TGGCCA 1 cut(s) 797
MreI CGCCGGCG 1 cut(s) 472
MroNI GCCGGC 3 cut(s) 302, 472, 703
MroXI GAANNNNTTC 1 cut(s) 886
MscI TGGCCA 1 cut(s) 797
MseI TTAA 4 cut(s) 1130, 1406, 1497, 1962
Msp20I TGGCCA 1 cut(s) 797
MspA1I CMGCKG 4 cut(s) 523, 1352, 1358, 1937
MspR9I CCNGG 5 cut(s) 18, 658, 709, 900, 1202
MunI CAATTG 3 cut(s) 960, 1461, 1521
Mva1269I GAATGC 1 cut(s) 1560
MvnI CGCG 7 cut(s) 284, 295, 297, 320, 364, 523, 775
NaeI GCCGGC 3 cut(s) 304, 474, 705
NarI GGCGCC 2 cut(s) 325, 737
NciI CCSGG 5 cut(s) 18, 658, 709, 900, 1202
NcoI CCATGG 1 cut(s) 1857
NgoMIV GCCGGC 3 cut(s) 302, 472, 703
NlaIV GGNNCC 8 cut(s) 326, 468, 594, 696, 738, 804, 830, 1927
NmeAIII GCCGAG 2 cut(s) 225, 350
NmuCI GTSAC 3 cut(s) 6, 64, 1944
NspI RCATGY 2 cut(s) 1414, 2063
NspV TTCGAA 1 cut(s) 977
PagI TCATGA 1 cut(s) 1654
PaqCI CACCTGC 1 cut(s) 1720
PciI ACATGT 1 cut(s) 2059
PcsI WCGNNNNNNNCGW 7 cut(s) 156, 252, 261, 270, 285, 345, 875
PctI GAATGC 1 cut(s) 1560
PdiI GCCGGC 3 cut(s) 304, 474, 705
PdmI GAANNNNTTC 1 cut(s) 886
PfeI GAWTC 8 cut(s) 21, 410, 618, 874, 1388, 1447, 1517, 1544
PflFI GACNNNGTC 1 cut(s) 581
PflMI CCANNNNNTGG 1 cut(s) 1283
PfoI TCCNGGA 1 cut(s) 16
PinAI ACCGGT 1 cut(s) 1467
PleI GAGTC 6 cut(s) 167, 350, 926, 1042, 1295, 1666
PluTI GGCGCC 2 cut(s) 328, 740
PpsI GAGTC 6 cut(s) 167, 350, 926, 1042, 1295, 1666
PpuMI RGGWCCY 1 cut(s) 592
PscI ACATGT 1 cut(s) 2059
Psp5II RGGWCCY 1 cut(s) 592
PspFI CCCAGC 1 cut(s) 1754
PspN4I GGNNCC 8 cut(s) 326, 468, 594, 696, 738, 804, 830, 1927
PspPI GGNCC 4 cut(s) 141, 592, 645, 1643
PspPPI RGGWCCY 1 cut(s) 592
PstI CTGCAG 3 cut(s) 1351, 1677, 1897
PsuI RGATCY 3 cut(s) 366, 694, 2037
PsyI GACNNNGTC 1 cut(s) 581
PvuII CAGCTG 2 cut(s) 1358, 1937
RsaI GTAC 1 cut(s) 830
RsaNI GTAC 1 cut(s) 829
SacII CCGCGG 1 cut(s) 524
SalI GTCGAC 1 cut(s) 263
SaqAI TTAA 4 cut(s) 1130, 1406, 1497, 1962
Sau96I GGNCC 4 cut(s) 141, 592, 645, 1643
SchI GAGTC 6 cut(s) 167, 351, 926, 1043, 1296, 1667
ScrFI CCNGG 5 cut(s) 18, 658, 709, 900, 1202
SduI GDGCHC 1 cut(s) 807
SfaNI GCATC 4 cut(s) 114, 1126, 1812, 1852
SfcI CTRYAG 5 cut(s) 1347, 1383, 1673, 1838, 1893
SfoI GGCGCC 2 cut(s) 326, 738
Sfr303I CCGCGG 1 cut(s) 524
SfuI TTCGAA 1 cut(s) 977
SgrAI CRCCGGYG 2 cut(s) 68, 472
SgrBI CCGCGG 1 cut(s) 524
SinI GGWCC 2 cut(s) 592, 645
SmlI CTYRAG 2 cut(s) 1647, 2027
SmoI CTYRAG 2 cut(s) 1647, 2027
SspDI GGCGCC 2 cut(s) 324, 736
SspMI CTAG 2 cut(s) 1367, 1916
StyD4I CCNGG 5 cut(s) 16, 656, 707, 898, 1200
StyI CCWWGG 2 cut(s) 798, 1857
TaaI ACNGT 6 cut(s) 1243, 1425, 1792, 1842, 1922, 1950
TaiI ACGT 3 cut(s) 195, 264, 2075
TauI GCSGC 8 cut(s) 295, 355, 472, 523, 526, 529, 614, 1355
TfiI GAWTC 8 cut(s) 21, 410, 618, 874, 1388, 1447, 1517, 1544
Tru1I TTAA 4 cut(s) 1130, 1406, 1497, 1962
Tru9I TTAA 4 cut(s) 1130, 1406, 1497, 1962
TscAI CASTG 1 cut(s) 1156
TseFI GTSAC 3 cut(s) 6, 64, 1944
Tsp45I GTSAC 3 cut(s) 6, 64, 1944
TspDTI ATGAA 6 cut(s) 62, 421, 1206, 1263, 2025, 2088
TspGWI ACGGA 2 cut(s) 20, 687
TspRI CASTG 1 cut(s) 1156
Tth111I GACNNNGTC 1 cut(s) 581
Van91I CCANNNNNTGG 1 cut(s) 1283
VpaK11BI GGWCC 2 cut(s) 592, 645
XapI RAATTY 2 cut(s) 386, 972
XbaI TCTAGA 1 cut(s) 1915
XceI RCATGY 2 cut(s) 1414, 2063
XmiI GTMKAC 2 cut(s) 258, 264
XmnI GAANNNNTTC 1 cut(s) 886
XspI CTAG 2 cut(s) 1367, 1916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.