MD15G1190300.v1.1

Plant protein of unknown function (DUF936)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0011282
Physical Location & Seq
Forward (+)
14986791 .. 14989562
2772 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1190300.v1.1.491

Sequence Viewer

Length: 2130 bp
ATGGCGTCGCTCACTCCAGGAATCCTCCTGAAGCTCCTCCAGTCAATGAACTCCGCCACCAAAGTCACCGGCGACCACCGCTCTGCCCTCCTCCAAGTCATCGGCATAGTCCCCGCCCTTGCCGGCTCTGACCTCTCGTCCAACCAGGGCTTCTACGTCCAGCTCTCCGACTCCCTCAACTCCACCTACGTCTCCCTCTCCGATCAGGACACCGACCTCATCCTCACAAACCGCCTCCAGCTCGGCCAGTTCGCCTACGTCGACCGCTTCAATTTTGACTCCCCCGTCCCACGCGTCCTCGGTATCCGCCGCATTGCAGGCCGCCACCCCTTTCTTGGTACCCCAGAGCCCCTTGTGGCCAGATTCTCTACCTCAAAGCGCGAGTTCGTGATCCAGCCCGTGTCGGATTCTGACCAGTCCGCCGATTTCATGGCGATTTACCTGTCCAATAAGCAGCAGGAGCAGGTTGTGAGGAATGACAACAAAGAAGCCAAGATTGAGAAGGCACGACCATCAAGGCAGCCTCTTGCTCCTCGAGACAATGTCAATACGGGAGGGAATTTGAATTCAAATTCAATTTCGGATGAGGCTAAGAAGATCTCAGATCGGCCGGCTTCCAGGTTTTCGTCTCCGGCAGGTGCAAAGAGGTCTGTTTCTGTCGGGAAGAAGAACCCTGCATCGGCCGAGAGAGATCCATCGCTGGCAGGAAAAGGAAAGAGATCGGGATCTCCAGCCCCCTCGAAATGCGTGGTTCCAAGCTTAATTGTGGCGAAGGAAGAGGATAGGAAGGCGTCGAAAGAGGCGGCGATTATAGTGCCGTCAAGGTACCGACAGCCGTCCCCGGTTGGGCAGCGGAGGCAGCCTTCGCCGAATGCACGGAGGGCTTCGCTTTCTCCCGGGAGGCGGTTGTCCGGAGGAGTGAAGGACTCTGCTGCCAAGAAGAAGATGGCAGGTATAGTTGCAGGGATTTCGAAGGTTTCGGAAGCCCTCATTGGGTCTGGAAAGGGTAATCGAAAGGGCTGGGATGAGTCGCCGGCGGTGGAGCAGAAAGAGAAGCCTGCGGCGAAGAACAAACCAGATTTGCAGTCATTTATAAGGACTCAGGCTGCCCTTGCACGACGATTAAGCGATGCGAAAGGTGGAATTCCGAACGGCGGTGATGATTCTTCCAGCAATGAGAAAACGAAATCAGGATCACTGAAAGATTTGGTGGTCCAAGAGAGACCCAGCTGTGCAGCAGCTCCGGGCATCACTGTTCATGGAAAAAAATGGACTGATGGAAGTGTCTCACTTGATGCAGTCTCTTCAGACCTTGCAAGGCTTGGAAAGGAAGCTTTGCAGAGGAAAGTTCTAGCTTCTGCAGCCGCAGCTGAAGCTCTGGAGGAGGCCATTGCTACTGAGTCTCTAGTGAGGAAATTAAGCATGTTTGCAGAACTCGCTTCTACATCCAAGGTTGGGAGCCCTCTACCCGCCATTGACCGCTTCTTTTCGATCTATGATGAAGTTGTTAAATCGACCACACTTACTGAATCAATTGCTAGTAACCGCAATTCAGATACATGTTACAATGATCAAATTCCCACTGAGCAATCGAAACCTGTTTCACTTTGGGTCGAAGCTGCCTTAGCTACTGATCTCAGCGTTGTCTCTCTCCTTGCCGCCCAAGACAATGAAACTCCATCGGCTTTGCAGAAAAGTCTGTCAAAAAGACGATACACACCTGCCAAATCCCATCTCAAGATTTCCCCTTCTTCACCGCAGTCCACTGCTGGCGTTGGAACATGGATGAAGGGTCATGGAATGAAGGAGACAGTCGAGCTTGCAGTAAGTCTGCAATCCGAGATGCAAATGTGGTTTCTGCAGTTTGTCGAGAAGGCTCTGGATGCCGGTTTCCGAGTGTTTGGAGAGTGCGCTGCAAATGGCGGTAAATTGCCTATCGACTGTGGCTCCATTGCAGCTGTTCTATCGCAGTTGAAGCGAGTGAATGAGTGGCTGGATGGAGTCGTCTCGAGAAGGAATGAGCTGAATGAGAAGGTTGATGGGCTGAAGAGGAAGATCTACGGCTTTGTTATTCAACATGTTGGGACGACGTTCGACAACCCCACTCCTCTTGCTTCTTCTTCCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF936

Protein Analysis

710

Amino Acids

75.93

Weight (kDa)

9.64

Isoelectric Point (pI)

53.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF936 PF06075 4 - 120 5.5e-50 Plant protein of unknown function (DUF936)
DUF6857 PF21647 418 - 700 1.7e-94 Domain of unknown function (DUF6857)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011282)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G13370
fragaria_vesca FvH4_1g05440 FvH4_1g05440
malus_domestica MD02G1062500.v1.1 MD15G1190300.v1.1 MD17G1097200.v1.1
prunus_persica Prupe.7G226800_v2.0.a1
pyrus_communis pycom02g04340 pycom15g17050
rosa_chinensis RchiOBHm_Chr2g0091101
rosa_laevigata RLG00000016180
rosa_multiflora Rmu_sc0004851.1_g000007 Rmu_sc0005171.1_g000002
rosa_roxburghii Rroxscaffold_2G00150540
rosa_rugosa Rorug02G0013000
rosa_samantha Rh2AG059200 Rh2BG057600 Rh2CG059500 Rh2DG058600
rosa_wichuraiana Rw2G005050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1094
AarI CACCTGC 2 cut(s) 626, 1729
AasI GACNNNNNNGTC 1 cut(s) 284
Acc36I ACCTGC 4 cut(s) 454, 626, 941, 1729
Acc65I GGTACC 2 cut(s) 338, 825
AccB1I GGYRCC 2 cut(s) 338, 825
AccBSI CCGCTC 1 cut(s) 81
AccI GTMKAC 1 cut(s) 261
AccII CGCG 2 cut(s) 294, 381
AccIII TCCGGA 1 cut(s) 911
AclWI GGATC 4 cut(s) 385, 686, 733, 1201
AcoI YGGCCR 4 cut(s) 244, 357, 608, 681
AcsI RAATTY 5 cut(s) 559, 565, 571, 1143, 1575
AcuI CTGAAG 4 cut(s) 50, 1290, 1392, 2066
AcyI GRCGYC 2 cut(s) 5, 791
AfaI GTAC 2 cut(s) 340, 827
AfiI CCNNNNNNNGG 7 cut(s) 335, 679, 846, 903, 993, 1154, 1455
AflIII ACRYGT 3 cut(s) 292, 1559, 2077
AgsI TTSAA 6 cut(s) 271, 565, 570, 576, 1975, 2075
AhdI GACNNNNNGTC 1 cut(s) 136
AjnI CCWGG 3 cut(s) 16, 144, 617
AjuI GAANNNNNNNTTGG 4 cut(s) 134, 166, 975, 1007
AlwI GGATC 4 cut(s) 385, 686, 733, 1201
Ama87I CYCGRG 3 cut(s) 534, 896, 2008
Aor13HI TCCGGA 1 cut(s) 911
AoxI GGCC 6 cut(s) 244, 319, 357, 608, 681, 1386
ApoI RAATTY 5 cut(s) 559, 565, 571, 1143, 1575
Asp718I GGTACC 2 cut(s) 338, 825
AspLEI GCGC 2 cut(s) 381, 1913
AspS9I GGNCC 1 cut(s) 1213
AsuC2I CCSGG 4 cut(s) 842, 897, 898, 1245
AsuHPI GGTGA 3 cut(s) 58, 1169, 1746
AsuII TTCGAA 1 cut(s) 971
AvaI CYCGRG 3 cut(s) 534, 896, 2008
AvaII GGWCC 1 cut(s) 1213
BalI TGGCCA 1 cut(s) 359
BanI GGYRCC 2 cut(s) 338, 825
BanII GRGCYC 2 cut(s) 351, 1463
BccI CCATC 8 cut(s) 520, 703, 940, 1271, 1687, 1740, 1991, 2033
BceAI ACGGC 4 cut(s) 802, 820, 1168, 2077
BcgI CGANNNNNNTGC 4 cut(s) 796, 830, 951, 985
BciT130I CCWGG 3 cut(s) 18, 146, 619
BciVI GTATCC 1 cut(s) 314
BclI TGATCA 1 cut(s) 1570
BcnI CCSGG 4 cut(s) 842, 897, 898, 1245
BfaI CTAG 3 cut(s) 1352, 1406, 1539
BfmI CTRYAG 2 cut(s) 1359, 1859
BfuAI ACCTGC 4 cut(s) 454, 626, 941, 1729
BfuI GTATCC 1 cut(s) 314
BglII AGATCT 2 cut(s) 597, 2055
Bme1390I CCNGG 7 cut(s) 18, 146, 619, 842, 897, 898, 1245
Bme18I GGWCC 1 cut(s) 1213
BmeRI GACNNNNNGTC 1 cut(s) 136
BmeT110I CYCGRG 3 cut(s) 534, 896, 2008
BmgT120I GGNCC 1 cut(s) 1213
BmiI GGNNCC 5 cut(s) 340, 753, 827, 1460, 1948
BmrFI CCNGG 7 cut(s) 18, 146, 619, 842, 897, 898, 1245
BmsI GCATC 6 cut(s) 686, 1120, 1257, 1285, 1833, 1873
BoxI GACNNNNGTC 1 cut(s) 835
BpmI CTGGAG 4 cut(s) 23, 221, 714, 1400
Bpu10I CCTNAGC 1 cut(s) 1624
Bpu14I TTCGAA 1 cut(s) 971
BpuEI CTTGAG 1 cut(s) 1721
BpuMI CCSGG 4 cut(s) 842, 897, 898, 1245
BsaBI GATNNNNATC 1 cut(s) 724
BsaHI GRCGYC 2 cut(s) 5, 791
BsaI GGTCTC 1 cut(s) 1216
BsaJI CCNNGG 5 cut(s) 145, 298, 840, 896, 1449
BsaWI WCCGGW 1 cut(s) 911
BsaXI ACNNNNNCTCC 2 cut(s) 1931, 1961
Bsc4I CCNNNNNNNGG 7 cut(s) 335, 679, 846, 903, 993, 1154, 1455
Bse118I RCCGGY 5 cut(s) 68, 122, 610, 1033, 1886
Bse1I ACTGG 3 cut(s) 40, 247, 415
Bse3DI GCAATG 4 cut(s) 312, 1180, 1389, 1950
Bse8I GATNNNNATC 1 cut(s) 724
BseAI TCCGGA 1 cut(s) 911
BseBI CCWGG 3 cut(s) 18, 146, 619
BseDI CCNNGG 5 cut(s) 145, 298, 840, 896, 1449
BseGI GGATG 7 cut(s) 219, 589, 1030, 1445, 1791, 1888, 2002
BseJI GATNNNNATC 1 cut(s) 724
BseLI CCNNNNNNNGG 7 cut(s) 335, 679, 846, 903, 993, 1154, 1455
BseMI GCAATG 4 cut(s) 312, 1180, 1389, 1950
BseMII CTCAG 5 cut(s) 615, 1115, 1389, 1575, 1651
BseNI ACTGG 3 cut(s) 40, 247, 415
BseRI GAGGAG 6 cut(s) 26, 80, 522, 930, 1397, 2097
BseX3I CGGCCG 2 cut(s) 608, 681
BseYI CCCAGC 2 cut(s) 1020, 1226
BsgI GTGCAG 1 cut(s) 1254
Bsh1236I CGCG 2 cut(s) 294, 381
Bsh1285I CGRYCG 3 cut(s) 265, 611, 684
BshFI GGCC 6 cut(s) 246, 321, 359, 610, 683, 1388
BshNI GGYRCC 2 cut(s) 338, 825
BsiEI CGRYCG 3 cut(s) 265, 611, 684
BsiHKCI CYCGRG 3 cut(s) 534, 896, 2008
BslFI GGGAC 4 cut(s) 95, 272, 823, 2098
BslI CCNNNNNNNGG 7 cut(s) 335, 679, 846, 903, 993, 1154, 1455
BsmBI CGTCTC 3 cut(s) 196, 633, 2011
BsmFI GGGAC 4 cut(s) 95, 272, 823, 2098
BsmI GAATGC 1 cut(s) 877
BsnI GGCC 6 cut(s) 246, 321, 359, 610, 683, 1388
Bso31I GGTCTC 1 cut(s) 1216
BsoBI CYCGRG 3 cut(s) 534, 896, 2008
Bsp119I TTCGAA 1 cut(s) 971
Bsp1286I GDGCHC 2 cut(s) 351, 1463
Bsp13I TCCGGA 1 cut(s) 911
BspANI GGCC 6 cut(s) 246, 321, 359, 610, 683, 1388
BspCNI CTCAG 5 cut(s) 614, 1114, 1390, 1576, 1650
BspEI TCCGGA 1 cut(s) 911
BspFNI CGCG 2 cut(s) 294, 381
BspLI GGNNCC 5 cut(s) 340, 753, 827, 1460, 1948
BspMAI CTGCAG 2 cut(s) 1363, 1863
BspMI ACCTGC 4 cut(s) 454, 626, 941, 1729
BspPI GGATC 4 cut(s) 385, 686, 733, 1201
BspT104I TTCGAA 1 cut(s) 971
BspT107I GGYRCC 2 cut(s) 338, 825
BspTNI GGTCTC 1 cut(s) 1216
BsrBI CCGCTC 1 cut(s) 81
BsrDI GCAATG 4 cut(s) 312, 1180, 1389, 1950
BsrFI RCCGGY 5 cut(s) 68, 122, 610, 1033, 1886
BsrI ACTGG 3 cut(s) 40, 247, 415
BssAI RCCGGY 5 cut(s) 68, 122, 610, 1033, 1886
BssECI CCNNGG 5 cut(s) 145, 298, 840, 896, 1449
BssNI GRCGYC 2 cut(s) 5, 791
BssT1I CCWWGG 1 cut(s) 1449
Bst2UI CCWGG 3 cut(s) 18, 146, 619
Bst4CI ACNGT 3 cut(s) 1255, 1813, 1943
Bst6I CTCTTC 3 cut(s) 771, 1309, 2042
BstACI GRCGYC 2 cut(s) 5, 791
BstBI TTCGAA 1 cut(s) 971
BstC8I GCNNGC 8 cut(s) 124, 319, 612, 702, 1035, 1059, 1771, 1821
BstDEI CTNAG 7 cut(s) 591, 601, 1101, 1398, 1584, 1624, 1637
BstF5I GGATG 7 cut(s) 219, 589, 1030, 1445, 1791, 1888, 2002
BstFNI CGCG 2 cut(s) 294, 381
BstHHI GCGC 2 cut(s) 381, 1913
BstMCI CGRYCG 3 cut(s) 265, 611, 684
BstNI CCWGG 3 cut(s) 18, 146, 619
BstNSI RCATGY 3 cut(s) 1426, 1563, 2081
BstPAI GACNNNNGTC 1 cut(s) 835
BstSCI CCNGG 7 cut(s) 16, 144, 617, 840, 895, 896, 1243
BstSFI CTRYAG 2 cut(s) 1359, 1859
BstUI CGCG 2 cut(s) 294, 381
BstX2I RGATCY 4 cut(s) 597, 691, 725, 2055
BstYI RGATCY 4 cut(s) 597, 691, 725, 2055
BstZI CGGCCG 2 cut(s) 608, 681
BsuI GTATCC 1 cut(s) 314
BsuRI GGCC 6 cut(s) 246, 321, 359, 610, 683, 1388
BtgZI GCGATG 2 cut(s) 681, 1143
BtsCI GGATG 7 cut(s) 219, 589, 1030, 1445, 1791, 1888, 2002
BtsI GCAGTG 1 cut(s) 1764
BtsIMutI CAGTG 4 cut(s) 1196, 1251, 1581, 1764
BveI ACCTGC 4 cut(s) 454, 626, 941, 1729
Cac8I GCNNGC 8 cut(s) 124, 319, 612, 702, 1035, 1059, 1771, 1821
CfoI GCGC 2 cut(s) 381, 1913
Cfr10I RCCGGY 5 cut(s) 68, 122, 610, 1033, 1886
Cfr13I GGNCC 1 cut(s) 1213
Cfr9I CCCGGG 1 cut(s) 896
CseI GACGC 2 cut(s) 283, 780
Csp6I GTAC 2 cut(s) 339, 826
CspCI CAANNNNNGTGG 2 cut(s) 2092, 2127
CviAII CATG 7 cut(s) 430, 1259, 1423, 1560, 1782, 1796, 2078
CviQI GTAC 2 cut(s) 339, 826
DdeI CTNAG 7 cut(s) 591, 601, 1101, 1398, 1584, 1624, 1637
DrdI GACNNNNNNGTC 1 cut(s) 284
DriI GACNNNNNGTC 1 cut(s) 136
DseDI GACNNNNNNGTC 1 cut(s) 284
EaeI YGGCCR 4 cut(s) 244, 357, 608, 681
EagI CGGCCG 2 cut(s) 608, 681
Eam1104I CTCTTC 3 cut(s) 771, 1309, 2042
Eam1105I GACNNNNNGTC 1 cut(s) 136
EarI CTCTTC 3 cut(s) 771, 1309, 2042
EciI GGCGGA 3 cut(s) 43, 296, 409
EclXI CGGCCG 2 cut(s) 608, 681
Eco130I CCWWGG 1 cut(s) 1449
Eco24I GRGCYC 2 cut(s) 351, 1463
Eco31I GGTCTC 1 cut(s) 1216
Eco47I GGWCC 1 cut(s) 1213
Eco52I CGGCCG 2 cut(s) 608, 681
Eco57I CTGAAG 4 cut(s) 50, 1290, 1392, 2066
Eco88I CYCGRG 3 cut(s) 534, 896, 2008
EcoRI GAATTC 2 cut(s) 565, 1143
EcoRII CCWGG 3 cut(s) 16, 144, 617
EcoT14I CCWWGG 1 cut(s) 1449
EcoT38I GRGCYC 2 cut(s) 351, 1463
ErhI CCWWGG 1 cut(s) 1449
Esp3I CGTCTC 3 cut(s) 196, 633, 2011
FaeI CATG 7 cut(s) 433, 1262, 1426, 1563, 1785, 1799, 2081
FaqI GGGAC 4 cut(s) 95, 272, 823, 2098
FatI CATG 7 cut(s) 429, 1258, 1422, 1559, 1781, 1795, 2077
FauI CCCGC 2 cut(s) 121, 1477
FbaI TGATCA 1 cut(s) 1570
FblI GTMKAC 1 cut(s) 261
FokI GGATG 7 cut(s) 206, 596, 1037, 1432, 1798, 1895, 2009
FriOI GRGCYC 2 cut(s) 351, 1463
FspBI CTAG 3 cut(s) 1352, 1406, 1539
GlaI GCGC 2 cut(s) 380, 1912
GsaI CCCAGC 2 cut(s) 1024, 1230
GsuI CTGGAG 4 cut(s) 23, 221, 714, 1400
HaeIII GGCC 6 cut(s) 246, 321, 359, 610, 683, 1388
HgaI GACGC 2 cut(s) 283, 780
HhaI GCGC 2 cut(s) 381, 1913
Hin1I GRCGYC 2 cut(s) 5, 791
Hin1II CATG 7 cut(s) 433, 1262, 1426, 1563, 1785, 1799, 2081
Hin6I GCGC 2 cut(s) 379, 1911
HinP1I GCGC 2 cut(s) 379, 1911
HincII GTYRAC 1 cut(s) 262
HindII GTYRAC 1 cut(s) 262
HindIII AAGCTT 2 cut(s) 757, 1332
HphI GGTGA 3 cut(s) 58, 1169, 1746
Hpy166II GTNNAC 2 cut(s) 262, 1764
Hpy8I GTNNAC 2 cut(s) 262, 1764
Hpy99I CGWCG 5 cut(s) 10, 263, 796, 1122, 2092
HpyCH4III ACNGT 3 cut(s) 1255, 1813, 1943
HpyCH4IV ACGT 4 cut(s) 156, 189, 258, 2090
HpyF3I CTNAG 7 cut(s) 591, 601, 1101, 1398, 1584, 1624, 1637
HpySE526I ACGT 4 cut(s) 156, 189, 258, 2090
Hsp92I GRCGYC 2 cut(s) 5, 791
Hsp92II CATG 7 cut(s) 433, 1262, 1426, 1563, 1785, 1799, 2081
HspAI GCGC 2 cut(s) 379, 1911
Kpn2I TCCGGA 1 cut(s) 911
KpnI GGTACC 2 cut(s) 342, 829
KroI GCCGGC 3 cut(s) 122, 610, 1033
KroNI GCCGGC 3 cut(s) 124, 612, 1035
Ksp22I TGATCA 1 cut(s) 1570
LmnI GCTCC 7 cut(s) 39, 460, 535, 1042, 1246, 1458, 1952
LweI GCATC 6 cut(s) 686, 1120, 1257, 1285, 1833, 1873
MaeI CTAG 3 cut(s) 1352, 1406, 1539
MaeII ACGT 4 cut(s) 156, 189, 258, 2090
MaeIII GTNAC 3 cut(s) 64, 1541, 1562
MbiI CCGCTC 1 cut(s) 81
MfeI CAATTG 1 cut(s) 1533
MflI RGATCY 4 cut(s) 597, 691, 725, 2055
MhlI GDGCHC 2 cut(s) 351, 1463
MlsI TGGCCA 1 cut(s) 359
MluI ACGCGT 1 cut(s) 292
MluNI TGGCCA 1 cut(s) 359
MlyI GAGTC 7 cut(s) 164, 272, 920, 1037, 1093, 1409, 2010
MmeI TCCRAC 4 cut(s) 165, 192, 384, 1756
Mox20I TGGCCA 1 cut(s) 359
MreI CGCCGGCG 1 cut(s) 1033
MroI TCCGGA 1 cut(s) 911
MroNI GCCGGC 3 cut(s) 122, 610, 1033
MscI TGGCCA 1 cut(s) 359
MseI TTAA 4 cut(s) 761, 1124, 1418, 1509
Msp20I TGGCCA 1 cut(s) 359
MspA1I CMGCKG 4 cut(s) 853, 1230, 1370, 1958
MspR9I CCNGG 7 cut(s) 18, 146, 619, 842, 897, 898, 1245
MunI CAATTG 1 cut(s) 1533
Mva1269I GAATGC 1 cut(s) 877
MvaI CCWGG 3 cut(s) 18, 146, 619
MvnI CGCG 2 cut(s) 294, 381
NaeI GCCGGC 3 cut(s) 124, 612, 1035
NciI CCSGG 4 cut(s) 842, 897, 898, 1245
NgoMIV GCCGGC 3 cut(s) 122, 610, 1033
NlaIII CATG 7 cut(s) 433, 1262, 1426, 1563, 1785, 1799, 2081
NlaIV GGNNCC 5 cut(s) 340, 753, 827, 1460, 1948
NmeAIII GCCGAG 2 cut(s) 222, 709
NmuCI GTSAC 1 cut(s) 64
NspI RCATGY 3 cut(s) 1426, 1563, 2081
NspV TTCGAA 1 cut(s) 971
PaeR7I CTCGAG 2 cut(s) 534, 2008
PaqCI CACCTGC 2 cut(s) 626, 1729
PciI ACATGT 2 cut(s) 1559, 2077
PcsI WCGNNNNNNNCGW 1 cut(s) 258
PctI GAATGC 1 cut(s) 877
PdiI GCCGGC 3 cut(s) 124, 612, 1035
PfeI GAWTC 5 cut(s) 21, 363, 407, 1163, 1529
PflFI GACNNNGTC 1 cut(s) 542
PfoI TCCNGGA 1 cut(s) 16
PleI GAGTC 7 cut(s) 164, 272, 920, 1036, 1093, 1408, 2009
PpsI GAGTC 7 cut(s) 164, 272, 920, 1036, 1093, 1408, 2009
PscI ACATGT 2 cut(s) 1559, 2077
PshAI GACNNNNGTC 1 cut(s) 835
PsiI TTATAA 1 cut(s) 1094
Psp6I CCWGG 3 cut(s) 16, 144, 617
PspFI CCCAGC 2 cut(s) 1020, 1226
PspGI CCWGG 3 cut(s) 16, 144, 617
PspN4I GGNNCC 5 cut(s) 340, 753, 827, 1460, 1948
PspPI GGNCC 1 cut(s) 1213
PstI CTGCAG 2 cut(s) 1363, 1863
PsuI RGATCY 4 cut(s) 597, 691, 725, 2055
PsyI GACNNNGTC 1 cut(s) 542
PvuII CAGCTG 3 cut(s) 1230, 1370, 1958
RsaI GTAC 2 cut(s) 340, 827
RsaNI GTAC 2 cut(s) 339, 826
SalI GTCGAC 1 cut(s) 260
SaqAI TTAA 4 cut(s) 761, 1124, 1418, 1509
Sau96I GGNCC 1 cut(s) 1213
SchI GAGTC 7 cut(s) 164, 272, 920, 1037, 1093, 1409, 2010
ScrFI CCNGG 7 cut(s) 18, 146, 619, 842, 897, 898, 1245
SduI GDGCHC 2 cut(s) 351, 1463
SfaNI GCATC 6 cut(s) 686, 1120, 1257, 1285, 1833, 1873
SfcI CTRYAG 2 cut(s) 1359, 1859
Sfr274I CTCGAG 2 cut(s) 534, 2008
SfuI TTCGAA 1 cut(s) 971
SgrAI CRCCGGYG 2 cut(s) 68, 1033
SinI GGWCC 1 cut(s) 1213
SlaI CTCGAG 2 cut(s) 534, 2008
SmaI CCCGGG 1 cut(s) 898
SmlI CTYRAG 3 cut(s) 534, 1736, 2008
SmoI CTYRAG 3 cut(s) 534, 1736, 2008
SspMI CTAG 3 cut(s) 1352, 1406, 1539
StyD4I CCNGG 7 cut(s) 16, 144, 617, 840, 895, 896, 1243
StyI CCWWGG 1 cut(s) 1449
TaaI ACNGT 3 cut(s) 1255, 1813, 1943
TaiI ACGT 4 cut(s) 159, 192, 261, 2093
TauI GCSGC 6 cut(s) 312, 324, 806, 1064, 1367, 1661
TfiI GAWTC 5 cut(s) 21, 363, 407, 1163, 1529
Tru1I TTAA 4 cut(s) 761, 1124, 1418, 1509
Tru9I TTAA 4 cut(s) 761, 1124, 1418, 1509
TscAI CASTG 4 cut(s) 1203, 1258, 1588, 1771
TseFI GTSAC 1 cut(s) 64
Tsp45I GTSAC 1 cut(s) 64
TspDTI ATGAA 7 cut(s) 62, 418, 1247, 1515, 1686, 1802, 1817
TspGWI ACGGA 1 cut(s) 892
TspMI CCCGGG 1 cut(s) 896
TspRI CASTG 4 cut(s) 1203, 1258, 1588, 1771
Tth111I GACNNNGTC 1 cut(s) 542
VpaK11BI GGWCC 1 cut(s) 1213
XapI RAATTY 5 cut(s) 559, 565, 571, 1143, 1575
XceI RCATGY 3 cut(s) 1426, 1563, 2081
XcmI CCANNNNNNNNNTGG 2 cut(s) 332, 943
XhoI CTCGAG 2 cut(s) 534, 2008
XmaI CCCGGG 1 cut(s) 896
XmiI GTMKAC 1 cut(s) 261
XspI CTAG 3 cut(s) 1352, 1406, 1539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.