FvH4_1g07981

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0015894
Physical Location & Seq
Forward (+)
4211966 .. 4213842
1877 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g07981.t1

Sequence Viewer

Length: 1569 bp
ATGGAAGTCACCCCTTTCACATTTCTCAATCAAGAAGAGTACTTGAACTTCTTCAGCTTGTATCCCGAGATGCAGGACTTCGGGACGAATGATGGGACTAATAACCCCGTTACTGGGTCGAAGAAAAGGAAGAAGATCGTGGAAGAGGATAACAACAATGGCAGCGCCGAGGAAGAAATGAAGAATAAGATTCCTTTAACTGACATCCTTACATCGTTGATGTTGCTAGACGAGGAGGAGAAGCAGGAGCAAGAGCTTTACTTTGCGCAGTCCCAGCAGCAAAAAGAGATTTTTGAAGCGAATTACAAGAAGAAATCGGAAGTCATGAGCCAATACTACTCTGATTTTCAAGAGAGCAGTACCCAACTCACCAACTTGGAGCAATCCCACGGCAAAAGGAGCCGCAGCGCTGCTTTTGTCGCGGCTGCTTCCGCGGCAGACTCCAGTAGCAGTGGCGCGGCCACCGCGGAGGTTGGTGCAGCAGCCTCCGCTGCGGTGACGGGACCGCACCGGAGGCTGTGGGTAAAAGACAGGTCGAAAGACTGGTGGGACCATTACAACAGCCCAAATGTTTCCGAGGACGAGTTCCGGAAGGCGTTCAGGATGAGCAAGGCCACATTCGACGTGATTTGCGAGGAGCTCGACTCTGCCGTGACCAAGAAGAACACAATGCTGAGGGACGCGATTCCGGTGCGGCAGCGCGTGGCCGTCTGCATATGGAGGCTGGCCACCGGGGAGCCGCTGCGGCTGGTTTCGAAGCGTTTCGGTCTCGGCATTTCCACCTGCCATAAGCTCGTGCTTGAAGTCTGCTCGGCTATCAAGACTGTTCTAATGGAGAAGTATCTCCACTGGCCTGACGAGCTCACATTGCAGGGAATCAAAACCGAGTTCGAATCTGTATCTGGCATCCCTAATGTTTCAGGTTCAATGTACACTACCCATGTCCCGATCATAGCACCCAAAGCGAGTGTGGCAGCTTACTTCAACAAGCGTCACACAGAGCGCAACCAGAAGACTTCCTACTCCATAACAGTTCAGGGTGTGGTTGATCCAAAAGGCATGTTCACCGACATTTGCGTAGGCTGGCCTGGTTCTATGCCGGATGACAAGGTGTTAGAGAATTCAGCTCTCTACAAAAGAGGCAGCTCCGGCCAATTGAAGGACGTTTGGGTCGTCGGAAACAAGGGTCATCCACTCATGGACTGGGTTTTGGTTCCTTACACCCATCAGAATTTGACATGGACGCAGCACGCTTTCAATGAGAAGATTGGGGACATTCAAGGAGTTGCTAAAGATGCATTTGCTAGGCTCAAAGGGAGGTGGTCTTGTTTACAAAAGAGGACTGAGGTGAAGCTGCAGGACCTGCCTGTGGTGCTTGGGGCTTGCTGTGTTCTCCACAACATTTGCACAATGAGGAACGATGAGCTCGATGCCGAGCTCAAATACGATCTTTTCGATGATGAGATGGTTTCTGAGAATGGTTTGAGGTCCGCTGTTGCAGTTCAAGCTAGGGATCACATTGCTCATAACTTGCTTCACCATGGCCTTGCAGGCACCGGGTTTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_C

Protein Analysis

523

Amino Acids

58.62

Weight (kDa)

6.09

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8040 PF26138 193 - 273 6e-06 Domain of unknown function (DUF8040)
DDE_Tnp_4 PF13359 311 - 467 1.1e-34 DDE superfamily endonuclease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015894)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G29780
fragaria_vesca FvH4_1g07981
malus_domestica MD15G1211600.v1.1
prunus_persica Prupe.7G205200_v2.0.a1
pyrus_communis pycom02g06720
rosa_chinensis RchiOBHm_Chr2g0094021
rosa_laevigata RLG00000016446
rosa_multiflora Rmu_co8489597.1_g000001 Rmu_ssc0000369.1_g000007
rosa_roxburghii Rroxscaffold_2G00147550
rosa_rugosa Rorug02G0040400
rosa_samantha Rh2AG087800 Rh2BG088000 Rh2CG090300 Rh2DG087000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 791
AasI GACNNNNNNGTC 1 cut(s) 1169
Acc16I TGCGCA 1 cut(s) 267
Acc36I ACCTGC 2 cut(s) 791, 1371
AccB1I GGYRCC 1 cut(s) 1553
AccII CGCG 6 cut(s) 422, 434, 458, 467, 683, 702
AccIII TCCGGA 1 cut(s) 588
AclWI GGATC 2 cut(s) 1043, 1521
AcoI YGGCCR 4 cut(s) 459, 705, 726, 1150
AcsI RAATTY 2 cut(s) 1120, 1231
AcuI CTGAAG 1 cut(s) 37
AfaI GTAC 3 cut(s) 41, 361, 932
AfeI AGCGCT 1 cut(s) 409
AfiI CCNNNNNNNGG 4 cut(s) 113, 114, 1159, 1369
AjiI CACGTC 1 cut(s) 625
AjnI CCWGG 1 cut(s) 1087
Alw21I GWGCWC 4 cut(s) 642, 864, 1428, 1440
Alw26I GTCTC 1 cut(s) 773
AlwI GGATC 2 cut(s) 1043, 1521
AlwNI CAGNNNCTG 1 cut(s) 1363
Ama87I CYCGRG 1 cut(s) 65
Aor13HI TCCGGA 1 cut(s) 588
Aor51HI AGCGCT 1 cut(s) 409
AoxI GGCC 8 cut(s) 459, 612, 705, 726, 851, 1085, 1150, 1543
ApoI RAATTY 2 cut(s) 1120, 1231
Asp700I GAANNNNTTC 3 cut(s) 50, 596, 761
AspLEI GCGC 6 cut(s) 167, 268, 410, 458, 702, 1005
AspS9I GGNCC 4 cut(s) 503, 550, 1360, 1488
AsuC2I CCSGG 2 cut(s) 733, 1558
AsuHPI GGTGA 5 cut(s) 361, 508, 1057, 1360, 1529
AsuII TTCGAA 2 cut(s) 755, 891
AvaI CYCGRG 1 cut(s) 65
AvaII GGWCC 4 cut(s) 503, 550, 1360, 1488
BalI TGGCCA 1 cut(s) 728
BanI GGYRCC 1 cut(s) 1553
BanII GRGCYC 4 cut(s) 642, 864, 1428, 1440
BarI GAAGNNNNNNTAC 4 cut(s) 32, 64, 1004, 1036
BauI CACGAG 1 cut(s) 794
BbsI GAAGAC 1 cut(s) 1019
Bbv12I GWGCWC 4 cut(s) 642, 864, 1428, 1440
BbvCI CCTCAGC 1 cut(s) 674
BccI CCATC 3 cut(s) 86, 1233, 1459
BceAI ACGGC 3 cut(s) 406, 635, 692
BcgI CGANNNNNNTGC 2 cut(s) 673, 707
BciT130I CCWGG 1 cut(s) 1089
BciVI GTATCC 1 cut(s) 72
BcnI CCSGG 2 cut(s) 733, 1558
BcoDI GTCTC 1 cut(s) 773
BfaI CTAG 3 cut(s) 227, 1305, 1509
BfmI CTRYAG 1 cut(s) 1355
BfoI RGCGCY 2 cut(s) 168, 411
BfuAI ACCTGC 2 cut(s) 791, 1371
BfuI GTATCC 1 cut(s) 72
BglI GCCNNNNNGGC 2 cut(s) 745, 1551
BmcAI AGTACT 1 cut(s) 41
Bme1390I CCNGG 3 cut(s) 733, 1089, 1558
Bme18I GGWCC 4 cut(s) 503, 550, 1360, 1488
BmeT110I CYCGRG 1 cut(s) 65
BmgBI CACGTC 1 cut(s) 625
BmgT120I GGNCC 4 cut(s) 503, 550, 1360, 1488
BmiI GGNNCC 6 cut(s) 401, 504, 551, 738, 1215, 1555
BmrFI CCNGG 3 cut(s) 733, 1089, 1558
BmrI ACTGGG 2 cut(s) 123, 1213
BmsI GCATC 4 cut(s) 60, 915, 1285, 1420
BmuI ACTGGG 2 cut(s) 123, 1213
BpiI GAAGAC 1 cut(s) 1019
BplI GAGNNNNNCTC 2 cut(s) 629, 661
BpmI CTGGAG 1 cut(s) 427
Bpu10I CCTNAGC 1 cut(s) 674
Bpu14I TTCGAA 2 cut(s) 755, 891
BpuMI CCSGG 2 cut(s) 733, 1558
BsaI GGTCTC 1 cut(s) 773
BsaJI CCNNGG 7 cut(s) 168, 388, 432, 465, 576, 732, 1540
BsaWI WCCGGW 3 cut(s) 510, 588, 688
Bsc4I CCNNNNNNNGG 4 cut(s) 113, 114, 1159, 1369
Bse1I ACTGG 5 cut(s) 118, 444, 548, 854, 1208
Bse3DI GCAATG 2 cut(s) 866, 1518
BseAI TCCGGA 1 cut(s) 588
BseBI CCWGG 1 cut(s) 1089
BseDI CCNNGG 7 cut(s) 168, 388, 432, 465, 576, 732, 1540
BseGI GGATG 5 cut(s) 204, 609, 906, 1108, 1189
BseLI CCNNNNNNNGG 4 cut(s) 113, 114, 1159, 1369
BseMI GCAATG 2 cut(s) 866, 1518
BseMII CTCAG 3 cut(s) 665, 1335, 1464
BseNI ACTGG 5 cut(s) 118, 444, 548, 854, 1208
BseRI GAGGAG 3 cut(s) 248, 251, 650
BseYI CCCAGC 1 cut(s) 273
BsgI GTGCAG 1 cut(s) 498
Bsh1236I CGCG 6 cut(s) 422, 434, 458, 467, 683, 702
BshFI GGCC 8 cut(s) 461, 614, 707, 728, 853, 1087, 1152, 1545
BshNI GGYRCC 1 cut(s) 1553
BsiHKAI GWGCWC 4 cut(s) 642, 864, 1428, 1440
BsiHKCI CYCGRG 1 cut(s) 65
BsiSI CCGG 7 cut(s) 511, 589, 689, 732, 1100, 1149, 1557
BslFI GGGAC 8 cut(s) 97, 109, 256, 516, 563, 692, 929, 1286
BslI CCNNNNNNNGG 4 cut(s) 113, 114, 1159, 1369
BsmAI GTCTC 1 cut(s) 773
BsmFI GGGAC 8 cut(s) 97, 109, 256, 516, 563, 692, 929, 1286
BsnI GGCC 8 cut(s) 461, 614, 707, 728, 853, 1087, 1152, 1545
Bso31I GGTCTC 1 cut(s) 773
BsoBI CYCGRG 1 cut(s) 65
Bsp119I TTCGAA 2 cut(s) 755, 891
Bsp1286I GDGCHC 4 cut(s) 642, 864, 1428, 1440
Bsp13I TCCGGA 1 cut(s) 588
Bsp1407I TGTACA 1 cut(s) 930
Bsp143I GATC 5 cut(s) 135, 948, 1048, 1447, 1513
Bsp19I CCATGG 1 cut(s) 1540
BspANI GGCC 8 cut(s) 461, 614, 707, 728, 853, 1087, 1152, 1545
BspCNI CTCAG 3 cut(s) 666, 1336, 1465
BspEI TCCGGA 1 cut(s) 588
BspFNI CGCG 6 cut(s) 422, 434, 458, 467, 683, 702
BspHI TCATGA 1 cut(s) 324
BspLI GGNNCC 6 cut(s) 401, 504, 551, 738, 1215, 1555
BspMAI CTGCAG 1 cut(s) 1359
BspMI ACCTGC 2 cut(s) 791, 1371
BspPI GGATC 2 cut(s) 1043, 1521
BspT104I TTCGAA 2 cut(s) 755, 891
BspT107I GGYRCC 1 cut(s) 1553
BspTNI GGTCTC 1 cut(s) 773
BsrDI GCAATG 2 cut(s) 866, 1518
BsrGI TGTACA 1 cut(s) 930
BsrI ACTGG 5 cut(s) 118, 444, 548, 854, 1208
BssECI CCNNGG 7 cut(s) 168, 388, 432, 465, 576, 732, 1540
BssMI GATC 5 cut(s) 135, 948, 1048, 1447, 1513
BssSI CACGAG 1 cut(s) 794
BssT1I CCWWGG 1 cut(s) 1540
Bst2BI CACGAG 1 cut(s) 794
Bst2UI CCWGG 1 cut(s) 1089
Bst4CI ACNGT 2 cut(s) 826, 1033
Bst6I CTCTTC 2 cut(s) 30, 138
BstAPI GCANNNNNTGC 1 cut(s) 1363
BstAUI TGTACA 1 cut(s) 930
BstBI TTCGAA 2 cut(s) 755, 891
BstC8I GCNNGC 5 cut(s) 726, 1085, 1251, 1384, 1552
BstDEI CTNAG 3 cut(s) 674, 1344, 1473
BstDSI CCRYGG 4 cut(s) 388, 432, 465, 1540
BstF5I GGATG 5 cut(s) 204, 609, 906, 1108, 1189
BstFNI CGCG 6 cut(s) 422, 434, 458, 467, 683, 702
BstH2I RGCGCY 2 cut(s) 168, 411
BstHHI GCGC 6 cut(s) 167, 268, 410, 458, 702, 1005
BstKTI GATC 5 cut(s) 138, 951, 1051, 1450, 1516
BstMAI GTCTC 1 cut(s) 773
BstMBI GATC 5 cut(s) 135, 948, 1048, 1447, 1513
BstNI CCWGG 1 cut(s) 1089
BstNSI RCATGY 1 cut(s) 1063
BstSCI CCNGG 3 cut(s) 731, 1087, 1556
BstSFI CTRYAG 1 cut(s) 1355
BstUI CGCG 6 cut(s) 422, 434, 458, 467, 683, 702
BstV2I GAAGAC 1 cut(s) 1019
BsuI GTATCC 1 cut(s) 72
BsuRI GGCC 8 cut(s) 461, 614, 707, 728, 853, 1087, 1152, 1545
BtgI CCRYGG 4 cut(s) 388, 432, 465, 1540
BtrI CACGTC 1 cut(s) 625
BtsCI GGATG 5 cut(s) 204, 609, 906, 1108, 1189
BtsI GCAGTG 1 cut(s) 457
BtsIMutI CAGTG 2 cut(s) 457, 847
BveI ACCTGC 2 cut(s) 791, 1371
Cac8I GCNNGC 5 cut(s) 726, 1085, 1251, 1384, 1552
CaiI CAGNNNCTG 1 cut(s) 1363
CciI TCATGA 1 cut(s) 324
CfoI GCGC 6 cut(s) 167, 268, 410, 458, 702, 1005
Cfr13I GGNCC 4 cut(s) 503, 550, 1360, 1488
Cfr42I CCGCGG 2 cut(s) 435, 468
CseI GACGC 3 cut(s) 689, 980, 1252
Csp6I GTAC 3 cut(s) 40, 360, 931
CspCI CAANNNNNGTGG 2 cut(s) 1385, 1420
CviAII CATG 6 cut(s) 325, 941, 1060, 1198, 1239, 1541
CviQI GTAC 3 cut(s) 40, 360, 931
DdeI CTNAG 3 cut(s) 674, 1344, 1473
DpnI GATC 5 cut(s) 137, 950, 1050, 1449, 1515
DpnII GATC 5 cut(s) 135, 948, 1048, 1447, 1513
DrdI GACNNNNNNGTC 1 cut(s) 1169
DseDI GACNNNNNNGTC 1 cut(s) 1169
EaeI YGGCCR 4 cut(s) 459, 705, 726, 1150
Eam1104I CTCTTC 2 cut(s) 30, 138
EarI CTCTTC 2 cut(s) 30, 138
Ecl136II GAGCTC 4 cut(s) 640, 862, 1426, 1438
Eco130I CCWWGG 1 cut(s) 1540
Eco24I GRGCYC 4 cut(s) 642, 864, 1428, 1440
Eco31I GGTCTC 1 cut(s) 773
Eco47I GGWCC 4 cut(s) 503, 550, 1360, 1488
Eco47III AGCGCT 1 cut(s) 409
Eco53kI GAGCTC 4 cut(s) 640, 862, 1426, 1438
Eco57I CTGAAG 1 cut(s) 37
Eco88I CYCGRG 1 cut(s) 65
EcoICRI GAGCTC 4 cut(s) 640, 862, 1426, 1438
EcoO109I RGGNCCY 1 cut(s) 1360
EcoRI GAATTC 1 cut(s) 1120
EcoRII CCWGG 1 cut(s) 1087
EcoT14I CCWWGG 1 cut(s) 1540
EcoT22I ATGCAT 1 cut(s) 1300
EcoT38I GRGCYC 4 cut(s) 642, 864, 1428, 1440
ErhI CCWWGG 1 cut(s) 1540
FaeI CATG 6 cut(s) 328, 944, 1063, 1201, 1242, 1544
FaqI GGGAC 8 cut(s) 97, 109, 256, 516, 563, 692, 929, 1286
FatI CATG 6 cut(s) 324, 940, 1059, 1197, 1238, 1540
FauNDI CATATG 1 cut(s) 716
FokI GGATG 5 cut(s) 191, 616, 893, 1115, 1176
FriOI GRGCYC 4 cut(s) 642, 864, 1428, 1440
FspBI CTAG 3 cut(s) 227, 1305, 1509
FspI TGCGCA 1 cut(s) 267
GlaI GCGC 6 cut(s) 166, 267, 409, 457, 701, 1004
GsaI CCCAGC 1 cut(s) 277
GsuI CTGGAG 1 cut(s) 427
HaeII RGCGCY 2 cut(s) 168, 411
HaeIII GGCC 8 cut(s) 461, 614, 707, 728, 853, 1087, 1152, 1545
HapII CCGG 7 cut(s) 511, 589, 689, 732, 1100, 1149, 1557
HgaI GACGC 3 cut(s) 689, 980, 1252
HhaI GCGC 6 cut(s) 167, 268, 410, 458, 702, 1005
Hin1II CATG 6 cut(s) 328, 944, 1063, 1201, 1242, 1544
Hin6I GCGC 6 cut(s) 165, 266, 408, 456, 700, 1003
HinP1I GCGC 6 cut(s) 165, 266, 408, 456, 700, 1003
HinfI GANTC 6 cut(s) 190, 440, 644, 685, 876, 893
HpaII CCGG 7 cut(s) 511, 589, 689, 732, 1100, 1149, 1557
HphI GGTGA 5 cut(s) 361, 508, 1057, 1360, 1529
Hpy166II GTNNAC 3 cut(s) 933, 1065, 1331
Hpy188I TCNGA 6 cut(s) 319, 343, 577, 1178, 1230, 1474
Hpy188III TCNNGA 9 cut(s) 32, 65, 82, 325, 350, 589, 601, 820, 946
Hpy8I GTNNAC 3 cut(s) 933, 1065, 1331
Hpy99I CGWCG 2 cut(s) 626, 1178
HpyAV CCTTC 2 cut(s) 586, 1153
HpyCH4III ACNGT 2 cut(s) 826, 1033
HpyCH4IV ACGT 2 cut(s) 624, 1164
HpyCH4V TGCA 9 cut(s) 73, 479, 714, 871, 1298, 1357, 1407, 1499, 1550
HpyF3I CTNAG 3 cut(s) 674, 1344, 1473
HpySE526I ACGT 2 cut(s) 624, 1164
Hsp92II CATG 6 cut(s) 328, 944, 1063, 1201, 1242, 1544
HspAI GCGC 6 cut(s) 165, 266, 408, 456, 700, 1003
Kpn2I TCCGGA 1 cut(s) 588
KspI CCGCGG 2 cut(s) 435, 468
Kzo9I GATC 5 cut(s) 135, 948, 1048, 1447, 1513
LmnI GCTCC 6 cut(s) 247, 379, 399, 637, 736, 1151
LweI GCATC 4 cut(s) 60, 915, 1285, 1420
MaeI CTAG 3 cut(s) 227, 1305, 1509
MaeII ACGT 2 cut(s) 624, 1164
MaeIII GTNAC 5 cut(s) 7, 109, 496, 652, 992
MalI GATC 5 cut(s) 137, 950, 1050, 1449, 1515
MboI GATC 5 cut(s) 135, 948, 1048, 1447, 1513
MfeI CAATTG 1 cut(s) 1154
MhlI GDGCHC 4 cut(s) 642, 864, 1428, 1440
MlsI TGGCCA 1 cut(s) 728
MluCI AATT 4 cut(s) 301, 1120, 1154, 1231
MluNI TGGCCA 1 cut(s) 728
MlyI GAGTC 2 cut(s) 434, 638
MmeI TCCRAC 1 cut(s) 1156
Mox20I TGGCCA 1 cut(s) 728
Mph1103I ATGCAT 1 cut(s) 1300
MroI TCCGGA 1 cut(s) 588
MroXI GAANNNNTTC 3 cut(s) 50, 596, 761
MscI TGGCCA 1 cut(s) 728
MseI TTAA 1 cut(s) 197
Msp20I TGGCCA 1 cut(s) 728
MspA1I CMGCKG 5 cut(s) 434, 467, 491, 742, 1493
MspI CCGG 7 cut(s) 511, 589, 689, 732, 1100, 1149, 1557
MspR9I CCNGG 3 cut(s) 733, 1089, 1558
MunI CAATTG 1 cut(s) 1154
MvaI CCWGG 1 cut(s) 1089
MvnI CGCG 6 cut(s) 422, 434, 458, 467, 683, 702
NciI CCSGG 2 cut(s) 733, 1558
NcoI CCATGG 1 cut(s) 1540
NdeI CATATG 1 cut(s) 716
NdeII GATC 5 cut(s) 135, 948, 1048, 1447, 1513
NlaIII CATG 6 cut(s) 328, 944, 1063, 1201, 1242, 1544
NlaIV GGNNCC 6 cut(s) 401, 504, 551, 738, 1215, 1555
NmeAIII GCCGAG 4 cut(s) 193, 750, 791, 1459
NmuCI GTSAC 4 cut(s) 7, 496, 652, 992
NsbI TGCGCA 1 cut(s) 267
NsiI ATGCAT 1 cut(s) 1300
NspI RCATGY 1 cut(s) 1063
NspV TTCGAA 2 cut(s) 755, 891
PagI TCATGA 1 cut(s) 324
PaqCI CACCTGC 1 cut(s) 791
PcsI WCGNNNNNNNCGW 5 cut(s) 630, 648, 1170, 1425, 1452
PdmI GAANNNNTTC 3 cut(s) 50, 596, 761
PfeI GAWTC 4 cut(s) 190, 685, 876, 893
PleI GAGTC 2 cut(s) 434, 638
PpsI GAGTC 2 cut(s) 434, 638
PpuMI RGGWCCY 1 cut(s) 1360
Psp124BI GAGCTC 4 cut(s) 642, 864, 1428, 1440
Psp5II RGGWCCY 1 cut(s) 1360
Psp6I CCWGG 1 cut(s) 1087
PspFI CCCAGC 1 cut(s) 273
PspGI CCWGG 1 cut(s) 1087
PspN4I GGNNCC 6 cut(s) 401, 504, 551, 738, 1215, 1555
PspPI GGNCC 4 cut(s) 503, 550, 1360, 1488
PspPPI RGGWCCY 1 cut(s) 1360
PstI CTGCAG 1 cut(s) 1359
PstNI CAGNNNCTG 1 cut(s) 1363
RsaI GTAC 3 cut(s) 41, 361, 932
RsaNI GTAC 3 cut(s) 40, 360, 931
SacI GAGCTC 4 cut(s) 642, 864, 1428, 1440
SacII CCGCGG 2 cut(s) 435, 468
SaqAI TTAA 1 cut(s) 197
Sau3AI GATC 5 cut(s) 135, 948, 1048, 1447, 1513
Sau96I GGNCC 4 cut(s) 503, 550, 1360, 1488
ScaI AGTACT 1 cut(s) 41
SchI GAGTC 2 cut(s) 434, 638
ScrFI CCNGG 3 cut(s) 733, 1089, 1558
SduI GDGCHC 4 cut(s) 642, 864, 1428, 1440
SfaNI GCATC 4 cut(s) 60, 915, 1285, 1420
SfcI CTRYAG 1 cut(s) 1355
Sfr303I CCGCGG 2 cut(s) 435, 468
SfuI TTCGAA 2 cut(s) 755, 891
SgrBI CCGCGG 2 cut(s) 435, 468
SinI GGWCC 4 cut(s) 503, 550, 1360, 1488
Sse9I AATT 4 cut(s) 301, 1120, 1154, 1231
SspMI CTAG 3 cut(s) 227, 1305, 1509
SstI GAGCTC 4 cut(s) 642, 864, 1428, 1440
StyD4I CCNGG 3 cut(s) 731, 1087, 1556
StyI CCWWGG 1 cut(s) 1540
TaaI ACNGT 2 cut(s) 826, 1033
TaiI ACGT 2 cut(s) 627, 1167
TaqI TCGA 8 cut(s) 119, 536, 621, 642, 755, 891, 1428, 1455
TaqII GACCGA 1 cut(s) 755
TasI AATT 4 cut(s) 301, 1120, 1154, 1231
TatI WGTACW 2 cut(s) 39, 930
TauI GCSGC 7 cut(s) 405, 425, 437, 461, 697, 742, 748
TfiI GAWTC 4 cut(s) 190, 685, 876, 893
Tru1I TTAA 1 cut(s) 197
Tru9I TTAA 1 cut(s) 197
TscAI CASTG 2 cut(s) 457, 854
TseFI GTSAC 4 cut(s) 7, 496, 652, 992
Tsp45I GTSAC 4 cut(s) 7, 496, 652, 992
TspDTI ATGAA 2 cut(s) 194, 1553
TspRI CASTG 2 cut(s) 457, 854
VpaK11BI GGWCC 4 cut(s) 503, 550, 1360, 1488
XapI RAATTY 2 cut(s) 1120, 1231
XceI RCATGY 1 cut(s) 1063
XcmI CCANNNNNNNNNTGG 2 cut(s) 967, 1200
XmnI GAANNNNTTC 3 cut(s) 50, 596, 761
XspI CTAG 3 cut(s) 227, 1305, 1509
ZrmI AGTACT 1 cut(s) 41
Zsp2I ATGCAT 1 cut(s) 1300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.