FvH4_1g11810

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
6461303 .. 6463855
2553 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g11810.t1

Sequence Viewer

Length: 1095 bp
ATGGCCCCTACTCCTACTACTCTGACCGCCATAGCGGGGGAGAAGACCCTCCAACAGAGCTTCGTCCGCGACGAAGATGAGCGCCCTAAGGTGGCCTACAACCAATTCAGCAATGATATTCCGATCATTTCCCTCTCCGGCATAGAAGAGGTCGAAGGCCGCCGCGCTGAGATTTGCAAGAAGATTGTTGAGGCCTGCGAGGACTGGGGCGTTTTCCAGATTGTTGATCACGGCATCGACCCCAAGCTCATCTCGGAAATGACTCGTCTCGCCAGAGAGTTCTTCGCTTTGCCGCCGGAGGAAAAGCTCCGTTTCGACATGTCCGGTGGCAAAAAGGGTGGCTTCATCGTTTCCAGCCATTTACAGGGAGAGGCGGTGCAGGATTGGCGCGAGATTGTGACCTACTTCTCATACCCGGTGCGCCACCGTGACTACTCGAGGTGGCCGGACAAGCCCGAGGGGTGGAGAGATGTGACAACGCAGTACAGTGACGAGCTGATGGGGTTGGCATGCAAGCTATTGGAGGTTTTATCAGAGGCCATGGGTTTAGAGAAGGAGGCATTGACGAAGGCATGTGTGGACATGGACCAAAAGGTTGTGGTGAATTTCTACCCGAAATGCCCCCAGCCGGACCTCACTCTCGGACTCAAACGCCACACGGATCCCGGTACCATTACCCTTTTGCTGCAGGACCAAGTCGGTGGACTTCAGGCCACCAGGGACGGCGGAAAGACGTGGATCACCGTTCAACCTGTGGAAGGAGCTTTCGTGGTGAATCTTGGAGACCATGGACATTTTCTGAGCAATGGGAGGTTCAAGAATGCTGATCACCAGGCGGTGGTGAACTCAAACCACAGCAGGTTGTCCATAGCGACATTCCAGAACCCAGCTCAGGAGGCGATAGTGTACCCACTGACGGTCAGAGAAGGAGAGAAGCCAATTCTGGAGGAGCCGATGACTTACACTGAGATGTACAAGAAGAAGATGAGTAAGGACCTTGAGCTAGCCAGGCTAAAGAAGCATGCAAAGGAGCAACTGCAGGATTCAGAGAAAACCAAACTTGAGGCCAAGCCAGTGGACGATATCTTTGCTTAA

Protein Analysis

365

Amino Acids

41.08

Weight (kDa)

5.52

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 40 - 150 1e-24 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 196 - 296 1.7e-31 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010899)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 849
Acc65I GGTACC 1 cut(s) 668
AccB1I GGYRCC 1 cut(s) 668
AccB7I CCANNNNNTGG 1 cut(s) 838
AccII CGCG 3 cut(s) 69, 165, 390
AciI CCGC 9 cut(s) 27, 35, 67, 160, 163, 293, 374, 726, 836
AclWI GGATC 3 cut(s) 656, 669, 746
AcoI YGGCCR 1 cut(s) 443
AcsI RAATTY 1 cut(s) 604
AcuI CTGAAG 1 cut(s) 692
AfaI GTAC 4 cut(s) 485, 670, 908, 974
AfiI CCNNNNNNNGG 9 cut(s) 36, 91, 364, 462, 628, 758, 838, 892, 916
AflIII ACRYGT 1 cut(s) 318
AgsI TTSAA 2 cut(s) 749, 817
AjiI CACGTC 1 cut(s) 735
AjnI CCWGG 3 cut(s) 716, 831, 1007
AluBI AGCT 8 cut(s) 60, 247, 307, 496, 517, 764, 890, 1003
AluI AGCT 8 cut(s) 60, 247, 307, 496, 517, 764, 890, 1003
Alw26I GTCTC 2 cut(s) 272, 777
AlwI GGATC 3 cut(s) 656, 669, 746
Ama87I CYCGRG 2 cut(s) 436, 455
AoxI GGCC 8 cut(s) 3, 93, 157, 192, 443, 537, 711, 1065
ApeKI GCWGC 1 cut(s) 685
ApoI RAATTY 1 cut(s) 604
ArsI GACNNNNNNTTYG 1 cut(s) 1070
Asp718I GGTACC 1 cut(s) 668
AspLEI GCGC 4 cut(s) 84, 167, 390, 423
AspS9I GGNCC 5 cut(s) 4, 586, 631, 691, 994
AsuC2I CCSGG 2 cut(s) 416, 666
AsuHPI GGTGA 5 cut(s) 613, 733, 784, 821, 853
AsuNHI GCTAGC 1 cut(s) 1003
AvaI CYCGRG 2 cut(s) 436, 455
AvaII GGWCC 4 cut(s) 586, 631, 691, 994
AxyI CCTNAGG 1 cut(s) 87
BamHI GGATCC 1 cut(s) 661
BanI GGYRCC 1 cut(s) 668
BbsI GAAGAC 1 cut(s) 50
BbvI GCAGC 1 cut(s) 672
BccI CCATC 1 cut(s) 493
BceAI ACGGC 2 cut(s) 247, 739
BcgI CGANNNNNNTGC 1 cut(s) 1070
BciT130I CCWGG 3 cut(s) 718, 833, 1009
BclI TGATCA 2 cut(s) 226, 826
BcnI CCSGG 2 cut(s) 416, 666
BcoDI GTCTC 2 cut(s) 272, 777
BfaI CTAG 1 cut(s) 1004
BfmI CTRYAG 2 cut(s) 686, 1037
BfoI RGCGCY 1 cut(s) 85
BfuAI ACCTGC 1 cut(s) 849
BisI GCNGC 4 cut(s) 160, 163, 293, 686
BlsI GCNGC 4 cut(s) 161, 164, 294, 687
Bme1390I CCNGG 5 cut(s) 416, 666, 718, 833, 1009
Bme18I GGWCC 4 cut(s) 586, 631, 691, 994
BmeT110I CYCGRG 2 cut(s) 436, 455
BmgBI CACGTC 1 cut(s) 735
BmgT120I GGNCC 5 cut(s) 4, 586, 631, 691, 994
BmiI GGNNCC 4 cut(s) 6, 663, 670, 951
BmrFI CCNGG 5 cut(s) 416, 666, 718, 833, 1009
BmrI ACTGGG 1 cut(s) 214
BmsI GCATC 1 cut(s) 243
BmtI GCTAGC 1 cut(s) 1007
BmuI ACTGGG 1 cut(s) 214
BpiI GAAGAC 1 cut(s) 50
BpmI CTGGAG 1 cut(s) 965
Bpu10I CCTNAGC 1 cut(s) 891
BpuEI CTTGAG 2 cut(s) 1019, 1082
BpuMI CCSGG 2 cut(s) 416, 666
BsaI GGTCTC 1 cut(s) 777
BsaJI CCNNGG 4 cut(s) 456, 540, 717, 787
BsaWI WCCGGW 1 cut(s) 323
BsaXI ACNNNNNCTCC 4 cut(s) 360, 390, 753, 783
Bsc4I CCNNNNNNNGG 9 cut(s) 36, 91, 364, 462, 628, 758, 838, 892, 916
Bse1I ACTGG 2 cut(s) 209, 1073
Bse21I CCTNAGG 1 cut(s) 87
Bse3DI GCAATG 2 cut(s) 118, 811
BseBI CCWGG 3 cut(s) 718, 833, 1009
BseDI CCNNGG 4 cut(s) 456, 540, 717, 787
BseLI CCNNNNNNNGG 9 cut(s) 36, 91, 364, 462, 628, 758, 838, 892, 916
BseMI GCAATG 2 cut(s) 118, 811
BseMII CTCAG 4 cut(s) 159, 791, 905, 957
BseNI ACTGG 2 cut(s) 209, 1073
BseRI GAGGAG 1 cut(s) 962
BseXI GCAGC 1 cut(s) 672
BseYI CCCAGC 2 cut(s) 624, 886
BsgI GTGCAG 1 cut(s) 398
Bsh1236I CGCG 3 cut(s) 69, 165, 390
BshFI GGCC 8 cut(s) 5, 95, 159, 194, 445, 539, 713, 1067
BshNI GGYRCC 1 cut(s) 668
BsiHKCI CYCGRG 2 cut(s) 436, 455
BsiSI CCGG 7 cut(s) 138, 296, 324, 416, 446, 629, 666
BslFI GGGAC 1 cut(s) 734
BslI CCNNNNNNNGG 9 cut(s) 36, 91, 364, 462, 628, 758, 838, 892, 916
BsmAI GTCTC 2 cut(s) 272, 777
BsmBI CGTCTC 1 cut(s) 272
BsmFI GGGAC 1 cut(s) 734
BsmI GAATGC 1 cut(s) 826
BsnI GGCC 8 cut(s) 5, 95, 159, 194, 445, 539, 713, 1067
Bso31I GGTCTC 1 cut(s) 777
BsoBI CYCGRG 2 cut(s) 436, 455
Bsp1407I TGTACA 1 cut(s) 972
Bsp143I GATC 5 cut(s) 123, 226, 661, 738, 826
Bsp19I CCATGG 2 cut(s) 540, 787
BspACI CCGC 9 cut(s) 27, 35, 67, 160, 163, 293, 374, 726, 836
BspANI GGCC 8 cut(s) 5, 95, 159, 194, 445, 539, 713, 1067
BspCNI CTCAG 4 cut(s) 160, 792, 904, 958
BspFNI CGCG 3 cut(s) 69, 165, 390
BspLI GGNNCC 4 cut(s) 6, 663, 670, 951
BspMAI CTGCAG 2 cut(s) 690, 1041
BspMI ACCTGC 1 cut(s) 849
BspOI GCTAGC 1 cut(s) 1007
BspPI GGATC 3 cut(s) 656, 669, 746
BspT107I GGYRCC 1 cut(s) 668
BspTNI GGTCTC 1 cut(s) 777
BsrDI GCAATG 2 cut(s) 118, 811
BsrGI TGTACA 1 cut(s) 972
BsrI ACTGG 2 cut(s) 209, 1073
BssECI CCNNGG 4 cut(s) 456, 540, 717, 787
BssMI GATC 5 cut(s) 123, 226, 661, 738, 826
BssT1I CCWWGG 2 cut(s) 540, 787
Bst2UI CCWGG 3 cut(s) 718, 833, 1009
Bst4CI ACNGT 4 cut(s) 428, 488, 745, 919
Bst6I CTCTTC 1 cut(s) 141
BstAUI TGTACA 1 cut(s) 972
BstC8I GCNNGC 5 cut(s) 196, 511, 515, 1005, 1023
BstDEI CTNAG 5 cut(s) 87, 168, 800, 891, 966
BstDSI CCRYGG 2 cut(s) 540, 787
BstENI CCTNNNNNAGG 1 cut(s) 756
BstFNI CGCG 3 cut(s) 69, 165, 390
BstH2I RGCGCY 1 cut(s) 85
BstHHI GCGC 4 cut(s) 84, 167, 390, 423
BstKTI GATC 5 cut(s) 126, 229, 664, 741, 829
BstMAI GTCTC 2 cut(s) 272, 777
BstMBI GATC 5 cut(s) 123, 226, 661, 738, 826
BstMWI GCNNNNNNNGC 6 cut(s) 66, 385, 451, 896, 1009, 1018
BstNI CCWGG 3 cut(s) 718, 833, 1009
BstNSI RCATGY 4 cut(s) 322, 513, 576, 1025
BstSCI CCNGG 5 cut(s) 414, 664, 716, 831, 1007
BstSFI CTRYAG 2 cut(s) 686, 1037
BstUI CGCG 3 cut(s) 69, 165, 390
BstV1I GCAGC 1 cut(s) 672
BstV2I GAAGAC 1 cut(s) 50
BstX2I RGATCY 1 cut(s) 661
BstXI CCANNNNNNTGG 2 cut(s) 701, 1075
BstYI RGATCY 1 cut(s) 661
Bsu36I CCTNAGG 1 cut(s) 87
BsuRI GGCC 8 cut(s) 5, 95, 159, 194, 445, 539, 713, 1067
BtgI CCRYGG 2 cut(s) 540, 787
BtrI CACGTC 1 cut(s) 735
BtsIMutI CAGTG 4 cut(s) 493, 911, 963, 1080
BveI ACCTGC 1 cut(s) 849
Cac8I GCNNGC 5 cut(s) 196, 511, 515, 1005, 1023
CfoI GCGC 4 cut(s) 84, 167, 390, 423
Cfr13I GGNCC 5 cut(s) 4, 586, 631, 691, 994
Csp6I GTAC 4 cut(s) 484, 669, 907, 973
CspCI CAANNNNNGTGG 2 cut(s) 319, 354
CviAII CATG 7 cut(s) 319, 510, 541, 573, 583, 788, 1022
CviQI GTAC 4 cut(s) 484, 669, 907, 973
DdeI CTNAG 5 cut(s) 87, 168, 800, 891, 966
DpnI GATC 5 cut(s) 125, 228, 663, 740, 828
DpnII GATC 5 cut(s) 123, 226, 661, 738, 826
EaeI YGGCCR 1 cut(s) 443
Eam1104I CTCTTC 1 cut(s) 141
EarI CTCTTC 1 cut(s) 141
EciI GGCGGA 1 cut(s) 741
Eco130I CCWWGG 2 cut(s) 540, 787
Eco147I AGGCCT 1 cut(s) 194
Eco31I GGTCTC 1 cut(s) 777
Eco32I GATATC 1 cut(s) 1084
Eco47I GGWCC 4 cut(s) 586, 631, 691, 994
Eco57I CTGAAG 1 cut(s) 692
Eco81I CCTNAGG 1 cut(s) 87
Eco88I CYCGRG 2 cut(s) 436, 455
EcoNI CCTNNNNNAGG 1 cut(s) 756
EcoO109I RGGNCCY 1 cut(s) 994
EcoRII CCWGG 3 cut(s) 716, 831, 1007
EcoRV GATATC 1 cut(s) 1084
EcoT14I CCWWGG 2 cut(s) 540, 787
ErhI CCWWGG 2 cut(s) 540, 787
Esp3I CGTCTC 1 cut(s) 272
FaeI CATG 7 cut(s) 322, 513, 544, 576, 586, 791, 1025
FalI AAGNNNNNCTT 2 cut(s) 326, 358
FaqI GGGAC 1 cut(s) 734
FatI CATG 7 cut(s) 318, 509, 540, 572, 582, 787, 1021
FauI CCCGC 1 cut(s) 28
FbaI TGATCA 2 cut(s) 226, 826
Fnu4HI GCNGC 4 cut(s) 160, 163, 293, 686
Fsp4HI GCNGC 4 cut(s) 160, 163, 293, 686
FspBI CTAG 1 cut(s) 1004
GlaI GCGC 4 cut(s) 83, 166, 389, 422
GluI GCNGC 4 cut(s) 160, 163, 293, 686
GsaI CCCAGC 2 cut(s) 628, 890
GsuI CTGGAG 1 cut(s) 965
HaeII RGCGCY 1 cut(s) 85
HaeIII GGCC 8 cut(s) 5, 95, 159, 194, 445, 539, 713, 1067
HapII CCGG 7 cut(s) 138, 296, 324, 416, 446, 629, 666
HhaI GCGC 4 cut(s) 84, 167, 390, 423
Hin1II CATG 7 cut(s) 322, 513, 544, 576, 586, 791, 1025
Hin6I GCGC 4 cut(s) 82, 165, 388, 421
HinP1I GCGC 4 cut(s) 82, 165, 388, 421
HinfI GANTC 4 cut(s) 262, 645, 775, 1043
HpaII CCGG 7 cut(s) 138, 296, 324, 416, 446, 629, 666
HphI GGTGA 5 cut(s) 613, 733, 784, 821, 853
Hpy166II GTNNAC 5 cut(s) 580, 704, 844, 907, 1078
Hpy188I TCNGA 8 cut(s) 24, 123, 256, 535, 644, 801, 923, 1048
Hpy188III TCNNGA 5 cut(s) 217, 817, 880, 893, 944
Hpy8I GTNNAC 5 cut(s) 580, 704, 844, 907, 1078
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 5 cut(s) 149, 547, 562, 752, 920
HpyCH4III ACNGT 4 cut(s) 428, 488, 745, 919
HpyCH4IV ACGT 1 cut(s) 734
HpyCH4V TGCA 6 cut(s) 177, 379, 513, 688, 1025, 1039
HpyF10VI GCNNNNNNNGC 6 cut(s) 66, 385, 451, 896, 1009, 1018
HpyF3I CTNAG 5 cut(s) 87, 168, 800, 891, 966
HpySE526I ACGT 1 cut(s) 734
Hsp92II CATG 7 cut(s) 322, 513, 544, 576, 586, 791, 1025
HspAI GCGC 4 cut(s) 82, 165, 388, 421
KpnI GGTACC 1 cut(s) 672
Ksp22I TGATCA 2 cut(s) 226, 826
Kzo9I GATC 5 cut(s) 123, 226, 661, 738, 826
LmnI GCTCC 4 cut(s) 312, 761, 949, 1030
Lsp1109I GCAGC 1 cut(s) 672
LweI GCATC 1 cut(s) 243
MaeI CTAG 1 cut(s) 1004
MaeII ACGT 1 cut(s) 734
MaeIII GTNAC 4 cut(s) 397, 428, 472, 488
MalI GATC 5 cut(s) 125, 228, 663, 740, 828
MboI GATC 5 cut(s) 123, 226, 661, 738, 826
MboII GAAGA 7 cut(s) 55, 86, 158, 193, 274, 991, 994
MflI RGATCY 1 cut(s) 661
MluCI AATT 3 cut(s) 104, 604, 939
MlyI GAGTC 2 cut(s) 256, 639
MmeI TCCRAC 1 cut(s) 76
MseI TTAA 1 cut(s) 1093
MslI CAYNNNNRTG 1 cut(s) 968
MspI CCGG 7 cut(s) 138, 296, 324, 416, 446, 629, 666
MspR9I CCNGG 5 cut(s) 416, 666, 718, 833, 1009
Mva1269I GAATGC 1 cut(s) 826
MvaI CCWGG 3 cut(s) 718, 833, 1009
MvnI CGCG 3 cut(s) 69, 165, 390
MwoI GCNNNNNNNGC 6 cut(s) 66, 385, 451, 896, 1009, 1018
NciI CCSGG 2 cut(s) 416, 666
NcoI CCATGG 2 cut(s) 540, 787
NdeII GATC 5 cut(s) 123, 226, 661, 738, 826
NheI GCTAGC 1 cut(s) 1003
NlaIII CATG 7 cut(s) 322, 513, 544, 576, 586, 791, 1025
NlaIV GGNNCC 4 cut(s) 6, 663, 670, 951
NmuCI GTSAC 4 cut(s) 397, 428, 472, 488
NspI RCATGY 4 cut(s) 322, 513, 576, 1025
PaeI GCATGC 2 cut(s) 513, 1025
PaeR7I CTCGAG 1 cut(s) 436
PceI AGGCCT 1 cut(s) 194
PciI ACATGT 1 cut(s) 318
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PctI GAATGC 1 cut(s) 826
PfeI GAWTC 2 cut(s) 775, 1043
PflFI GACNNNGTC 1 cut(s) 695
PflMI CCANNNNNTGG 1 cut(s) 838
PkrI GCNGC 4 cut(s) 161, 164, 294, 687
PleI GAGTC 2 cut(s) 256, 639
PpsI GAGTC 2 cut(s) 256, 639
PpuMI RGGWCCY 1 cut(s) 994
PscI ACATGT 1 cut(s) 318
Psp5II RGGWCCY 1 cut(s) 994
Psp6I CCWGG 3 cut(s) 716, 831, 1007
PspFI CCCAGC 2 cut(s) 624, 886
PspGI CCWGG 3 cut(s) 716, 831, 1007
PspN4I GGNNCC 4 cut(s) 6, 663, 670, 951
PspPI GGNCC 5 cut(s) 4, 586, 631, 691, 994
PspPPI RGGWCCY 1 cut(s) 994
PspXI VCTCGAGB 1 cut(s) 436
PstI CTGCAG 2 cut(s) 690, 1041
PsuI RGATCY 1 cut(s) 661
PsyI GACNNNGTC 1 cut(s) 695
RsaI GTAC 4 cut(s) 485, 670, 908, 974
RsaNI GTAC 4 cut(s) 484, 669, 907, 973
RseI CAYNNNNRTG 1 cut(s) 968
SaqAI TTAA 1 cut(s) 1093
SatI GCNGC 4 cut(s) 160, 163, 293, 686
Sau3AI GATC 5 cut(s) 123, 226, 661, 738, 826
Sau96I GGNCC 5 cut(s) 4, 586, 631, 691, 994
SchI GAGTC 2 cut(s) 256, 639
ScrFI CCNGG 5 cut(s) 416, 666, 718, 833, 1009
SfaNI GCATC 1 cut(s) 243
SfcI CTRYAG 2 cut(s) 686, 1037
Sfr274I CTCGAG 1 cut(s) 436
SinI GGWCC 4 cut(s) 586, 631, 691, 994
SlaI CTCGAG 1 cut(s) 436
SmiMI CAYNNNNRTG 1 cut(s) 968
SmlI CTYRAG 3 cut(s) 436, 998, 1061
SmoI CTYRAG 3 cut(s) 436, 998, 1061
SphI GCATGC 2 cut(s) 513, 1025
Sse9I AATT 3 cut(s) 104, 604, 939
SseBI AGGCCT 1 cut(s) 194
SsiI CCGC 9 cut(s) 27, 35, 67, 160, 163, 293, 374, 726, 836
SspMI CTAG 1 cut(s) 1004
StuI AGGCCT 1 cut(s) 194
StyD4I CCNGG 5 cut(s) 414, 664, 716, 831, 1007
StyI CCWWGG 2 cut(s) 540, 787
TaaI ACNGT 4 cut(s) 428, 488, 745, 919
TaiI ACGT 1 cut(s) 737
TaqI TCGA 4 cut(s) 153, 237, 315, 437
TasI AATT 3 cut(s) 104, 604, 939
TatI WGTACW 2 cut(s) 483, 972
TauI GCSGC 3 cut(s) 162, 165, 295
TfiI GAWTC 2 cut(s) 775, 1043
Tru1I TTAA 1 cut(s) 1093
Tru9I TTAA 1 cut(s) 1093
TscAI CASTG 4 cut(s) 493, 918, 970, 1080
TseFI GTSAC 4 cut(s) 397, 428, 472, 488
TseI GCWGC 1 cut(s) 685
Tsp45I GTSAC 4 cut(s) 397, 428, 472, 488
TspDTI ATGAA 1 cut(s) 334
TspGWI ACGGA 2 cut(s) 299, 674
TspRI CASTG 4 cut(s) 493, 918, 970, 1080
Tth111I GACNNNGTC 1 cut(s) 695
Van91I CCANNNNNTGG 1 cut(s) 838
VpaK11BI GGWCC 4 cut(s) 586, 631, 691, 994
XagI CCTNNNNNAGG 1 cut(s) 756
XapI RAATTY 1 cut(s) 604
XceI RCATGY 4 cut(s) 322, 513, 576, 1025
XhoI CTCGAG 1 cut(s) 436
XspI CTAG 1 cut(s) 1004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.