pycom02g10320

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0010899
Physical Location & Seq
Reverse (-)
7187743 .. 7189830
2088 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g10320.2

Sequence Viewer

Length: 1038 bp
ATGAATGTAGGTGACTCCACGAGCCATGAGGTAGTTGTAGCAAACCTAACCATAGATATATATTCACCCTTTAAATCTCAATATATATACACCTCATCCTACCCACAATTTTCAAGCACTGATCACATTTTTTCTCTCACCAAAACAAACACAAAACGTATTTCGTTTGAGCCAATACCAAGTAGACAGAACCAACAAATTCGACACCAAAATATGGCTCCTGCTACTACGCTCACATCCATAGCGCATGAGAAAACCCTGCAACAAAAATTTGTCCGAGACGAAGACGAGCGTCCAAAGGTTGCCTACAACGACTTCAGCAACGAAATTCCGATCATCTCGCTTGCCGGGATCGATGAGGTGGAAGGCCGCCGGGCCGAGATTTGCAAGAAGATTGTAGCGGCTTGTGAGGACTGGGGTGTTTTCCAGATTGTTGACCATGGGGTTGATGCCGAGCTCATATCGGAAATGACCGGTCTCGCTAGAGAGTTCTTTGCTTTGCCATCGGAGGAGAAGCTCCGCTTCGACATGTCCGGTGGCAAAAAGGGTGGCTTCATCGTGTCCAGTCATTTACAGGGAGAAGCTGTGCAAGATTGGCGTGAAATTGTGACCTACTTTTCATATCCGATTCGTCACCGGGACTATTCGAGGTGGCCAGACAAGCCTGAGGCCTGGAGGGAGGTGACAAAGAAGTACAGTGACGAGTTGATGGGGCTGGCATGCAAGCTCCTGGGGGTTTTATCAGAAGCCATGGGGTTGGATACAGAGGCATTGACAAAGGCATGTGTGGACATGGACCAAAAAGTCGTCGTGAATTTCTACCCAAAATGCCCTCAGCCCGACCTAACCCTTGGCCTCAAGCGCCATACCGACCCGGGCACAATTACCCTTCTGCTTCAAGACCAAGTTGGGGGCCTCCAGGCTACTCGGGATGATGGGAAAACGTGGATCGACCGTTCAACCAGTGGAAGGAGCTTTTGTGGTCAATCTTGGAGATCATGGTCATTTTCTGAGCAATGGGAGGTTCAAGAATGCTGA

Protein Analysis

346

Amino Acids

39.17

Weight (kDa)

5.39

Isoelectric Point (pI)

47.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010899)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51240 AT3G51240
fragaria_vesca FvH4_1g11810
malus_domestica MD02G1132200.v1.1 MD15G1246200.v1.1
prunus_persica Prupe.7G168300_v2.0.a1 Prupe.7G168300_v2.0.a1
pyrus_communis pycom02g10320 pycom15g21590
rosa_chinensis RchiOBHm_Chr2g0099421
rosa_laevigata RLG00000016880
rosa_multiflora Rmu_co8440373.1_g000001 Rmu_sc0002487.1_g000013
rosa_roxburghii Rroxscaffold_2G00143090
rosa_rugosa Rorug02G0079600
rosa_samantha Rh2AG129400 Rh2BG132300 Rh2CG133200 Rh2DG133500
rosa_wichuraiana Rw2G009960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 803
AccB7I CCANNNNNTGG 1 cut(s) 214
AccI GTMKAC 1 cut(s) 184
AciI CCGC 3 cut(s) 370, 401, 520
AclWI GGATC 2 cut(s) 359, 956
AcoI YGGCCR 1 cut(s) 653
AcsI RAATTY 4 cut(s) 198, 269, 327, 814
AcuI CTGAAG 1 cut(s) 301
AfaI GTAC 1 cut(s) 695
AfiI CCNNNNNNNGG 3 cut(s) 214, 910, 969
AflIII ACRYGT 1 cut(s) 528
AgeI ACCGGT 1 cut(s) 473
AgsI TTSAA 4 cut(s) 114, 899, 960, 1028
AjnI CCWGG 3 cut(s) 671, 729, 918
AloI GAACNNNNNNTCC 2 cut(s) 940, 972
AluBI AGCT 5 cut(s) 457, 517, 584, 727, 975
AluI AGCT 5 cut(s) 457, 517, 584, 727, 975
Alw21I GWGCWC 1 cut(s) 459
Alw26I GTCTC 2 cut(s) 273, 482
AlwI GGATC 2 cut(s) 359, 956
Ama87I CYCGRG 2 cut(s) 874, 927
AoxI GGCC 6 cut(s) 367, 375, 653, 669, 853, 913
ApoI RAATTY 4 cut(s) 198, 269, 327, 814
AsiGI ACCGGT 1 cut(s) 473
AspLEI GCGC 2 cut(s) 247, 864
AspS9I GGNCC 3 cut(s) 375, 796, 913
AsuC2I CCSGG 5 cut(s) 349, 374, 638, 875, 876
AsuHPI GGTGA 5 cut(s) 23, 57, 130, 626, 694
AvaI CYCGRG 2 cut(s) 874, 927
AvaII GGWCC 1 cut(s) 796
AxyI CCTNAGG 1 cut(s) 666
BaeGI GKGCMC 1 cut(s) 881
BalI TGGCCA 1 cut(s) 655
BanII GRGCYC 1 cut(s) 459
BauI CACGAG 1 cut(s) 19
BbsI GAAGAC 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 459
BbvCI CCTCAGC 1 cut(s) 834
BccI CCATC 3 cut(s) 511, 703, 929
BciT130I CCWGG 3 cut(s) 673, 731, 920
BciVI GTATCC 1 cut(s) 754
BclI TGATCA 1 cut(s) 121
BcnI CCSGG 5 cut(s) 349, 374, 638, 875, 876
BcoDI GTCTC 2 cut(s) 273, 482
BfaI CTAG 1 cut(s) 483
BfoI RGCGCY 1 cut(s) 865
BfuI GTATCC 1 cut(s) 754
BisI GCNGC 2 cut(s) 370, 402
BlsI GCNGC 2 cut(s) 371, 403
Bme1390I CCNGG 8 cut(s) 349, 374, 638, 673, 731, 875, 876, 920
Bme18I GGWCC 1 cut(s) 796
BmeT110I CYCGRG 2 cut(s) 874, 927
BmgT120I GGNCC 3 cut(s) 375, 796, 913
BmiI GGNNCC 2 cut(s) 219, 914
BmrFI CCNGG 8 cut(s) 349, 374, 638, 673, 731, 875, 876, 920
BmrI ACTGGG 1 cut(s) 424
BmsI GCATC 1 cut(s) 439
BmuI ACTGGG 1 cut(s) 424
BoxI GACNNNNGTC 1 cut(s) 291
BpiI GAAGAC 1 cut(s) 291
BpmI CTGGAG 2 cut(s) 694, 902
Bpu10I CCTNAGC 1 cut(s) 834
BpuEI CTTGAG 1 cut(s) 842
BpuMI CCSGG 5 cut(s) 349, 374, 638, 875, 876
Bsa29I ATCGAT 1 cut(s) 354
BsaI GGTCTC 1 cut(s) 482
BsaJI CCNNGG 5 cut(s) 439, 730, 750, 850, 874
BsaWI WCCGGW 2 cut(s) 473, 533
BsaXI ACNNNNNCTCC 4 cut(s) 570, 600, 964, 994
Bsc4I CCNNNNNNNGG 3 cut(s) 214, 910, 969
Bse118I RCCGGY 1 cut(s) 473
Bse1I ACTGG 3 cut(s) 419, 564, 963
Bse21I CCTNAGG 1 cut(s) 666
Bse3DI GCAATG 1 cut(s) 1022
BseBI CCWGG 3 cut(s) 673, 731, 920
BseCI ATCGAT 1 cut(s) 354
BseDI CCNNGG 5 cut(s) 439, 730, 750, 850, 874
BseGI GGATG 3 cut(s) 95, 236, 937
BseLI CCNNNNNNNGG 3 cut(s) 214, 910, 969
BseMI GCAATG 1 cut(s) 1022
BseMII CTCAG 3 cut(s) 657, 848, 1002
BseNI ACTGG 3 cut(s) 419, 564, 963
BseRI GAGGAG 1 cut(s) 524
BseSI GKGCMC 1 cut(s) 881
Bsh1285I CGRYCG 1 cut(s) 955
BshFI GGCC 6 cut(s) 369, 377, 655, 671, 855, 915
BshTI ACCGGT 1 cut(s) 473
BshVI ATCGAT 1 cut(s) 354
BsiEI CGRYCG 1 cut(s) 955
BsiHKAI GWGCWC 1 cut(s) 459
BsiHKCI CYCGRG 2 cut(s) 874, 927
BsiSI CCGG 6 cut(s) 348, 373, 474, 534, 637, 875
BslFI GGGAC 1 cut(s) 653
BslI CCNNNNNNNGG 3 cut(s) 214, 910, 969
BsmAI GTCTC 2 cut(s) 273, 482
BsmBI CGTCTC 1 cut(s) 273
BsmFI GGGAC 1 cut(s) 653
BsmI GAATGC 1 cut(s) 1037
BsnI GGCC 6 cut(s) 369, 377, 655, 671, 855, 915
Bso31I GGTCTC 1 cut(s) 482
BsoBI CYCGRG 2 cut(s) 874, 927
Bsp1286I GDGCHC 2 cut(s) 459, 881
Bsp143I GATC 5 cut(s) 121, 333, 351, 948, 995
Bsp19I CCATGG 2 cut(s) 439, 750
BspACI CCGC 3 cut(s) 370, 401, 520
BspANI GGCC 6 cut(s) 369, 377, 655, 671, 855, 915
BspCNI CTCAG 3 cut(s) 658, 847, 1003
BspDI ATCGAT 1 cut(s) 354
BspLI GGNNCC 2 cut(s) 219, 914
BspPI GGATC 2 cut(s) 359, 956
BspTNI GGTCTC 1 cut(s) 482
BsrDI GCAATG 1 cut(s) 1022
BsrFI RCCGGY 1 cut(s) 473
BsrI ACTGG 3 cut(s) 419, 564, 963
BssAI RCCGGY 1 cut(s) 473
BssECI CCNNGG 5 cut(s) 439, 730, 750, 850, 874
BssMI GATC 5 cut(s) 121, 333, 351, 948, 995
BssSI CACGAG 1 cut(s) 19
BssT1I CCWWGG 3 cut(s) 439, 750, 850
Bst2BI CACGAG 1 cut(s) 19
Bst2UI CCWGG 3 cut(s) 673, 731, 920
Bst4CI ACNGT 2 cut(s) 698, 956
BstC8I GCNNGC 4 cut(s) 345, 717, 721, 725
BstDEI CTNAG 3 cut(s) 666, 834, 1011
BstDSI CCRYGG 2 cut(s) 439, 750
BstF5I GGATG 3 cut(s) 95, 236, 937
BstH2I RGCGCY 1 cut(s) 865
BstHHI GCGC 2 cut(s) 247, 864
BstKTI GATC 5 cut(s) 124, 336, 354, 951, 998
BstMAI GTCTC 2 cut(s) 273, 482
BstMBI GATC 5 cut(s) 121, 333, 351, 948, 995
BstMCI CGRYCG 1 cut(s) 955
BstMWI GCNNNNNNNGC 3 cut(s) 595, 661, 861
BstNI CCWGG 3 cut(s) 673, 731, 920
BstNSI RCATGY 3 cut(s) 532, 723, 786
BstPAI GACNNNNGTC 1 cut(s) 291
BstSCI CCNGG 8 cut(s) 347, 372, 636, 671, 729, 873, 874, 918
BstSLI GKGCMC 1 cut(s) 881
BstV2I GAAGAC 1 cut(s) 291
BstXI CCANNNNNNTGG 1 cut(s) 757
Bsu15I ATCGAT 1 cut(s) 354
Bsu36I CCTNAGG 1 cut(s) 666
BsuI GTATCC 1 cut(s) 754
BsuRI GGCC 6 cut(s) 369, 377, 655, 671, 855, 915
BsuTUI ATCGAT 1 cut(s) 354
BtgI CCRYGG 2 cut(s) 439, 750
BtsCI GGATG 3 cut(s) 95, 236, 937
BtsIMutI CAGTG 3 cut(s) 117, 703, 970
Cac8I GCNNGC 4 cut(s) 345, 717, 721, 725
CfoI GCGC 2 cut(s) 247, 864
Cfr10I RCCGGY 1 cut(s) 473
Cfr13I GGNCC 3 cut(s) 375, 796, 913
Cfr9I CCCGGG 1 cut(s) 874
ClaI ATCGAT 1 cut(s) 354
CseI GACGC 1 cut(s) 281
Csp6I GTAC 1 cut(s) 694
CspAI ACCGGT 1 cut(s) 473
CspCI CAANNNNNGTGG 2 cut(s) 529, 564
CviAII CATG 9 cut(s) 26, 248, 440, 529, 720, 751, 783, 793, 999
CviQI GTAC 1 cut(s) 694
DdeI CTNAG 3 cut(s) 666, 834, 1011
DpnI GATC 5 cut(s) 123, 335, 353, 950, 997
DpnII GATC 5 cut(s) 121, 333, 351, 948, 995
DraI TTTAAA 1 cut(s) 73
DrdI GACNNNNNNGTC 1 cut(s) 803
DseDI GACNNNNNNGTC 1 cut(s) 803
EaeI YGGCCR 1 cut(s) 653
Ecl136II GAGCTC 1 cut(s) 457
Eco130I CCWWGG 3 cut(s) 439, 750, 850
Eco147I AGGCCT 1 cut(s) 671
Eco24I GRGCYC 1 cut(s) 459
Eco31I GGTCTC 1 cut(s) 482
Eco47I GGWCC 1 cut(s) 796
Eco53kI GAGCTC 1 cut(s) 457
Eco57I CTGAAG 1 cut(s) 301
Eco81I CCTNAGG 1 cut(s) 666
Eco88I CYCGRG 2 cut(s) 874, 927
EcoICRI GAGCTC 1 cut(s) 457
EcoO109I RGGNCCY 1 cut(s) 913
EcoRII CCWGG 3 cut(s) 671, 729, 918
EcoT14I CCWWGG 3 cut(s) 439, 750, 850
EcoT38I GRGCYC 1 cut(s) 459
ErhI CCWWGG 3 cut(s) 439, 750, 850
Esp3I CGTCTC 1 cut(s) 273
FaeI CATG 9 cut(s) 29, 251, 443, 532, 723, 754, 786, 796, 1002
FalI AAGNNNNNCTT 4 cut(s) 506, 538, 536, 568
FaqI GGGAC 1 cut(s) 653
FatI CATG 9 cut(s) 25, 247, 439, 528, 719, 750, 782, 792, 998
FbaI TGATCA 1 cut(s) 121
FblI GTMKAC 1 cut(s) 184
Fnu4HI GCNGC 2 cut(s) 370, 402
FokI GGATG 3 cut(s) 82, 223, 944
FriOI GRGCYC 1 cut(s) 459
Fsp4HI GCNGC 2 cut(s) 370, 402
FspBI CTAG 1 cut(s) 483
GlaI GCGC 2 cut(s) 246, 863
GluI GCNGC 2 cut(s) 370, 402
GsuI CTGGAG 2 cut(s) 694, 902
HaeII RGCGCY 1 cut(s) 865
HaeIII GGCC 6 cut(s) 369, 377, 655, 671, 855, 915
HapII CCGG 6 cut(s) 348, 373, 474, 534, 637, 875
HgaI GACGC 1 cut(s) 281
HhaI GCGC 2 cut(s) 247, 864
Hin1II CATG 9 cut(s) 29, 251, 443, 532, 723, 754, 786, 796, 1002
Hin6I GCGC 2 cut(s) 245, 862
HinP1I GCGC 2 cut(s) 245, 862
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HinfI GANTC 2 cut(s) 14, 628
HpaII CCGG 6 cut(s) 348, 373, 474, 534, 637, 875
HphI GGTGA 5 cut(s) 23, 57, 130, 626, 694
Hpy166II GTNNAC 3 cut(s) 185, 436, 790
Hpy188I TCNGA 7 cut(s) 278, 333, 466, 508, 627, 745, 1012
Hpy188III TCNNGA 5 cut(s) 427, 811, 899, 929, 1028
Hpy8I GTNNAC 3 cut(s) 185, 436, 790
Hpy99I CGWCG 1 cut(s) 812
HpyAV CCTTC 3 cut(s) 359, 899, 963
HpyCH4III ACNGT 2 cut(s) 698, 956
HpyCH4IV ACGT 2 cut(s) 157, 944
HpyCH4V TGCA 4 cut(s) 262, 387, 589, 723
HpyF10VI GCNNNNNNNGC 3 cut(s) 595, 661, 861
HpyF3I CTNAG 3 cut(s) 666, 834, 1011
HpySE526I ACGT 2 cut(s) 157, 944
Hsp92II CATG 9 cut(s) 29, 251, 443, 532, 723, 754, 786, 796, 1002
HspAI GCGC 2 cut(s) 245, 862
Ksp22I TGATCA 1 cut(s) 121
Kzo9I GATC 5 cut(s) 121, 333, 351, 948, 995
LmnI GCTCC 4 cut(s) 223, 522, 732, 972
LweI GCATC 1 cut(s) 439
MaeI CTAG 1 cut(s) 483
MaeII ACGT 2 cut(s) 157, 944
MaeIII GTNAC 5 cut(s) 11, 607, 632, 682, 698
MalI GATC 5 cut(s) 123, 335, 353, 950, 997
MboI GATC 5 cut(s) 121, 333, 351, 948, 995
MboII GAAGA 2 cut(s) 296, 403
MhlI GDGCHC 2 cut(s) 459, 881
MlsI TGGCCA 1 cut(s) 655
MluCI AATT 7 cut(s) 107, 198, 269, 327, 603, 814, 882
MluNI TGGCCA 1 cut(s) 655
MlyI GAGTC 1 cut(s) 8
MmeI TCCRAC 1 cut(s) 738
Mox20I TGGCCA 1 cut(s) 655
MscI TGGCCA 1 cut(s) 655
MseI TTAA 1 cut(s) 72
Msp20I TGGCCA 1 cut(s) 655
MspI CCGG 6 cut(s) 348, 373, 474, 534, 637, 875
MspR9I CCNGG 8 cut(s) 349, 374, 638, 673, 731, 875, 876, 920
Mva1269I GAATGC 1 cut(s) 1037
MvaI CCWGG 3 cut(s) 673, 731, 920
MwoI GCNNNNNNNGC 3 cut(s) 595, 661, 861
NciI CCSGG 5 cut(s) 349, 374, 638, 875, 876
NcoI CCATGG 2 cut(s) 439, 750
NdeII GATC 5 cut(s) 121, 333, 351, 948, 995
NlaIII CATG 9 cut(s) 29, 251, 443, 532, 723, 754, 786, 796, 1002
NlaIV GGNNCC 2 cut(s) 219, 914
NmeAIII GCCGAG 2 cut(s) 403, 478
NmuCI GTSAC 5 cut(s) 11, 607, 632, 682, 698
NspI RCATGY 3 cut(s) 532, 723, 786
PaeI GCATGC 1 cut(s) 723
PceI AGGCCT 1 cut(s) 671
PciI ACATGT 1 cut(s) 528
PctI GAATGC 1 cut(s) 1037
PfeI GAWTC 1 cut(s) 628
PflMI CCANNNNNTGG 1 cut(s) 214
PinAI ACCGGT 1 cut(s) 473
PkrI GCNGC 2 cut(s) 371, 403
PleI GAGTC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 8
PscI ACATGT 1 cut(s) 528
PshAI GACNNNNGTC 1 cut(s) 291
Psp124BI GAGCTC 1 cut(s) 459
Psp6I CCWGG 3 cut(s) 671, 729, 918
PspGI CCWGG 3 cut(s) 671, 729, 918
PspN4I GGNNCC 2 cut(s) 219, 914
PspPI GGNCC 3 cut(s) 375, 796, 913
RsaI GTAC 1 cut(s) 695
RsaNI GTAC 1 cut(s) 694
SacI GAGCTC 1 cut(s) 459
SaqAI TTAA 1 cut(s) 72
SatI GCNGC 2 cut(s) 370, 402
Sau3AI GATC 5 cut(s) 121, 333, 351, 948, 995
Sau96I GGNCC 3 cut(s) 375, 796, 913
SchI GAGTC 1 cut(s) 8
ScrFI CCNGG 8 cut(s) 349, 374, 638, 673, 731, 875, 876, 920
SduI GDGCHC 2 cut(s) 459, 881
SfaNI GCATC 1 cut(s) 439
SinI GGWCC 1 cut(s) 796
SmaI CCCGGG 1 cut(s) 876
SmlI CTYRAG 1 cut(s) 857
SmoI CTYRAG 1 cut(s) 857
SphI GCATGC 1 cut(s) 723
Sse9I AATT 7 cut(s) 107, 198, 269, 327, 603, 814, 882
SseBI AGGCCT 1 cut(s) 671
SsiI CCGC 3 cut(s) 370, 401, 520
SspMI CTAG 1 cut(s) 483
SstI GAGCTC 1 cut(s) 459
StuI AGGCCT 1 cut(s) 671
StyD4I CCNGG 8 cut(s) 347, 372, 636, 671, 729, 873, 874, 918
StyI CCWWGG 3 cut(s) 439, 750, 850
TaaI ACNGT 2 cut(s) 698, 956
TaiI ACGT 2 cut(s) 160, 947
TaqI TCGA 5 cut(s) 202, 354, 525, 647, 951
TasI AATT 7 cut(s) 107, 198, 269, 327, 603, 814, 882
TatI WGTACW 1 cut(s) 693
TauI GCSGC 2 cut(s) 372, 404
TfiI GAWTC 1 cut(s) 628
Tru1I TTAA 1 cut(s) 72
Tru9I TTAA 1 cut(s) 72
TscAI CASTG 3 cut(s) 124, 703, 970
TseFI GTSAC 5 cut(s) 11, 607, 632, 682, 698
Tsp45I GTSAC 5 cut(s) 11, 607, 632, 682, 698
TspDTI ATGAA 3 cut(s) 17, 544, 609
TspMI CCCGGG 1 cut(s) 874
TspRI CASTG 3 cut(s) 124, 703, 970
Van91I CCANNNNNTGG 1 cut(s) 214
VpaK11BI GGWCC 1 cut(s) 796
XapI RAATTY 4 cut(s) 198, 269, 327, 814
XceI RCATGY 3 cut(s) 532, 723, 786
XmaI CCCGGG 1 cut(s) 874
XmiI GTMKAC 1 cut(s) 184
XspI CTAG 1 cut(s) 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.