FvH4_1g13730

Cupin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0012303
Physical Location & Seq
Reverse (-)
7567420 .. 7570593
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g13730.t3

Sequence Viewer

Length: 1908 bp
ATGTCTAACAGAGATTCAAATCCACCGTTCTCACTTACTCTGTTCATTGTCTTCTTCTTGCTTTTGTTACCTGCCTCCTCTTCTTCTGCCAAGTCTTTGAAATATGATGAGGAGGATTCTTCCGGTTCTGGTTCCGGGTACTTGGTGAGGAGAGATCAGAGGAGGGCGTTGGTTCAGACAGAGTACGGTGATATCTCGTCTATCGATGTTACCGATGGACGGAGAGGGCCGTATCATGTCCAGTTCATCACCATGGAACCCAACTCGCTGTTCCTTCCGGTGCTTCTCCATGCAGACATGGTGTTCTATGTCCACACAGGGAGTGGAACCTTGAATTGGGCTCATGGAGAGGATGATCAAATCAACAAGGTTTCTATAAAGAAAGGTGATATTCATAGACTGCGCCCAGGCTCTCTCTTCTTTATACAGAGTGATTTACAGACTGAGCGTCACAAACTAAGAATTAATGCAATCTTTGCAAATACTGAGGAAGACGTATATGATCCAACAATAGGAGCGTACTCCAGTGTTAGGGACCTGGTGCGAGGTTTCGACACCAAAATCCTTCGGTCAGCTTTTCAGGTTTCTGAGGAAGTGATCCAGTCCATAACAAATTCAACAGACCACTCAGCCATTGTCCATGCAGTGCCCCCAACGAAGAAAGAAACCTTTTGGGATTTGGAAGCTCGGTTCTTGAAAACGTTTATAGGAGCCAGTTACGATGGCACGGCATTAAACAAGAAGAAGGATAAGAAGCATAAGAAGAAAGACAAATCAAAAACATATAATATTTTTGATACTGACCCAGATTTCAGGAATTGTAATGGTTGGAGCACTACCGTGAATGAGAGAAACTCACCTTTATTGACTGGATCAAACATTGGCCTTTTCATGGTGAACTTGACGAAGGGTTCAATGATGGGGCCTCATTGGAATCCAAGGGCAACTGAGATCTCAGTGGTGTTACATGGGGAAGGAATGGTCAGGGTGGTTTGTTCTAGCACAGCAAAGAGATCAGAGTGCAGAAATTTGAGGTTTCGGGTTAAGGAAGGAGATGTTTTTGCTGTACCCATGTTCCATCCAATGGCGCAGATGTCATATAACAACGACTCATTGGTGTTTATGGGGTTCAGCACCACAACTAGGAGAAATTATCCTCAGTTTTTGGCGGGAAAATACTCGGTTCTCCAAACTTTGAACAGACAGATCTTGGCGGTGTCTTTGAATGTTACCAACACCACAGTCGATCAGCTTTTGGCTGCACAGGTAGAATCAATCATACTCGATTGTACTTCTTGTGCTGAAGAAGAGGAGAAAATAATGCTGGAAGAGATTGAAAAGGAAAGGGAGGAAGAGGAGGCTAGGAAGAGAGAGGAACAGAGGAAGAGAGAAGAGGAGCAGAGACAGAGAGAGGAGGAAGAAGCGAGAAAGAGAGAAAAGGAAGAAGAGAAGAGGAAGAGAGAAGAGGAGGAGGAAGAGAGGAGGAGAGAAGAACAGGAGGAAGAAGAGAGGAGGCAGAGAGAAGAGGAGGAAGAAGAGAGGAGAAAGAGAGAAGGAGAGGAAGAACAAGAGAGGGAGAGGCAACAGGAAGAAGAACAAGAAAGGAAGAGGAGAGAAGAACAAGAGAGGCAGAGGCAACAGGAGGAAGAAGAAAGGAGGAGAGAAGAAGCAGCAGCAGCAGCACGAAGGGAGCAAGAAGAAGAAGCAGCAAGAGCCCGGGAGGAACAAGAAGAGGCTAGGAGACAACAACAAGAAGAGTACAGTAGAAGAAGAGAGGAAGAGGCCCAAACAGAGCAAGAAGAGGCTAGGCGACAACAAGAGGAAATAGAAAGAAGAACTAGACCAGAGGAGCAAGAAACAGAAGGTGACCAAGGTTTTGATGGTGAAGCGGGAAGAAGAGAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0043207 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0098542
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cupin_1

Protein Analysis

636

Amino Acids

74.51

Weight (kDa)

5.18

Isoelectric Point (pI)

90.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cupin_1 PF00190 262 - 415 6.7e-38 Cupin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012303)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36700
fragaria_vesca FvH4_1g13730 FvH4_1g13730 FvH4_1g13730
malus_domestica MD02G1152000.v1.1 MD15G1266400.v1.1
prunus_persica Prupe.7G151000_v2.0.a1 Prupe.7G151000_v2.0.a1
pyrus_communis pycom02g11940
rosa_chinensis RchiOBHm_Chr2g0102141
rosa_laevigata RLG00000017133
rosa_roxburghii Rroxscaffold_2G00140750
rosa_rugosa Rorug02G0104600 Rorug02G0104700
rosa_samantha Rh2AG153100 Rh2BG159000 Rh2CG158300 Rh2DG158700
rosa_wichuraiana Rw2G011950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 79
AccB7I CCANNNNNTGG 1 cut(s) 1084
AciI CCGC 3 cut(s) 1169, 1214, 1889
AclI AACGTT 1 cut(s) 701
AclWI GGATC 3 cut(s) 497, 592, 880
AcsI RAATTY 2 cut(s) 613, 1027
AcuI CTGAAG 1 cut(s) 1323
AfaI GTAC 6 cut(s) 140, 185, 521, 1068, 1291, 1760
AfiI CCNNNNNNNGG 7 cut(s) 219, 336, 512, 531, 892, 1084, 1143
AgsI TTSAA 9 cut(s) 18, 100, 334, 618, 697, 915, 1198, 1225, 1337
AhdI GACNNNNNGTC 1 cut(s) 447
AjnI CCWGG 2 cut(s) 406, 537
AjuI GAANNNNNNNTTGG 4 cut(s) 254, 286, 319, 351
AleI CACNNNNGTG 1 cut(s) 839
AloI GAACNNNNNNTCC 2 cut(s) 674, 706
AluBI AGCT 3 cut(s) 575, 686, 1252
AluI AGCT 3 cut(s) 575, 686, 1252
Alw21I GWGCWC 1 cut(s) 836
Alw26I GTCTC 2 cut(s) 1396, 1735
AlwI GGATC 3 cut(s) 497, 592, 880
Ama87I CYCGRG 1 cut(s) 1716
AoxI GGCC 4 cut(s) 227, 883, 923, 1782
ApeKI GCWGC 6 cut(s) 1259, 1670, 1673, 1676, 1679, 1706
ApoI RAATTY 2 cut(s) 613, 1027
ArsI GACNNNNNNTTYG 2 cut(s) 1859, 1891
AseI ATTAAT 1 cut(s) 465
AspLEI GCGC 2 cut(s) 405, 1090
AspS9I GGNCC 4 cut(s) 227, 535, 923, 1783
AsuC2I CCSGG 3 cut(s) 136, 1717, 1718
AsuHPI GGTGA 8 cut(s) 157, 200, 241, 398, 849, 907, 1877, 1895
AvaI CYCGRG 1 cut(s) 1716
AvaII GGWCC 1 cut(s) 535
BaeGI GKGCMC 1 cut(s) 651
BanII GRGCYC 2 cut(s) 343, 1717
BbsI GAAGAC 2 cut(s) 43, 498
Bbv12I GWGCWC 1 cut(s) 836
BbvI GCAGC 6 cut(s) 1246, 1682, 1685, 1688, 1691, 1718
BccI CCATC 5 cut(s) 209, 716, 913, 1086, 1874
BceAI ACGGC 2 cut(s) 214, 744
BciT130I CCWGG 2 cut(s) 408, 539
BclI TGATCA 1 cut(s) 355
BcnI CCSGG 3 cut(s) 136, 1717, 1718
BcoDI GTCTC 2 cut(s) 1396, 1735
BfaI CTAG 6 cut(s) 999, 1143, 1362, 1737, 1806, 1839
BfuAI ACCTGC 1 cut(s) 79
BglII AGATCT 2 cut(s) 951, 1206
BisI GCNGC 6 cut(s) 1260, 1671, 1674, 1677, 1680, 1707
BlsI GCNGC 6 cut(s) 1261, 1672, 1675, 1678, 1681, 1708
Bme1390I CCNGG 5 cut(s) 136, 408, 539, 1717, 1718
Bme18I GGWCC 1 cut(s) 535
BmeRI GACNNNNNGTC 1 cut(s) 447
BmeT110I CYCGRG 1 cut(s) 1716
BmgT120I GGNCC 4 cut(s) 227, 535, 923, 1783
BmiI GGNNCC 6 cut(s) 133, 258, 328, 536, 712, 924
BmrFI CCNGG 5 cut(s) 136, 408, 539, 1717, 1718
BpiI GAAGAC 2 cut(s) 43, 498
BplI GAGNNNNNCTC 2 cut(s) 839, 871
BpmI CTGGAG 1 cut(s) 508
BpuMI CCSGG 3 cut(s) 136, 1717, 1718
Bsa29I ATCGAT 1 cut(s) 204
BsaBI GATNNNNATC 1 cut(s) 18
BsaJI CCNNGG 5 cut(s) 252, 406, 938, 1716, 1870
BsaWI WCCGGW 2 cut(s) 122, 277
Bsc4I CCNNNNNNNGG 7 cut(s) 219, 336, 512, 531, 892, 1084, 1143
Bse1I ACTGG 5 cut(s) 241, 525, 601, 714, 874
Bse8I GATNNNNATC 1 cut(s) 18
BseBI CCWGG 2 cut(s) 408, 539
BseCI ATCGAT 1 cut(s) 204
BseDI CCNNGG 5 cut(s) 252, 406, 938, 1716, 1870
BseGI GGATG 2 cut(s) 358, 1078
BseJI GATNNNNATC 1 cut(s) 18
BseLI CCNNNNNNNGG 7 cut(s) 219, 336, 512, 531, 892, 1084, 1143
BseMII CTCAG 7 cut(s) 435, 477, 579, 642, 939, 969, 1172
BseNI ACTGG 5 cut(s) 241, 525, 601, 714, 874
BseSI GKGCMC 1 cut(s) 651
BseXI GCAGC 6 cut(s) 1246, 1682, 1685, 1688, 1691, 1718
BsgI GTGCAG 2 cut(s) 1042, 1245
BshFI GGCC 4 cut(s) 229, 885, 925, 1784
BshVI ATCGAT 1 cut(s) 204
BsiHKAI GWGCWC 1 cut(s) 836
BsiHKCI CYCGRG 1 cut(s) 1716
BsiSI CCGG 4 cut(s) 123, 135, 278, 1717
BslFI GGGAC 1 cut(s) 548
BslI CCNNNNNNNGG 7 cut(s) 219, 336, 512, 531, 892, 1084, 1143
BsmAI GTCTC 2 cut(s) 1396, 1735
BsmFI GGGAC 1 cut(s) 548
BsnI GGCC 4 cut(s) 229, 885, 925, 1784
BsoBI CYCGRG 1 cut(s) 1716
Bsp1286I GDGCHC 4 cut(s) 343, 651, 836, 1717
Bsp143I GATC 9 cut(s) 154, 355, 502, 597, 872, 951, 1013, 1206, 1246
Bsp19I CCATGG 1 cut(s) 252
BspACI CCGC 3 cut(s) 1169, 1214, 1889
BspANI GGCC 4 cut(s) 229, 885, 925, 1784
BspCNI CTCAG 7 cut(s) 436, 478, 580, 641, 940, 968, 1171
BspDI ATCGAT 1 cut(s) 204
BspLI GGNNCC 6 cut(s) 133, 258, 328, 536, 712, 924
BspMI ACCTGC 1 cut(s) 79
BspPI GGATC 3 cut(s) 497, 592, 880
BsrI ACTGG 5 cut(s) 241, 525, 601, 714, 874
BssECI CCNNGG 5 cut(s) 252, 406, 938, 1716, 1870
BssMI GATC 9 cut(s) 154, 355, 502, 597, 872, 951, 1013, 1206, 1246
BssT1I CCWWGG 3 cut(s) 252, 938, 1870
Bst2UI CCWGG 2 cut(s) 408, 539
Bst4CI ACNGT 5 cut(s) 27, 188, 841, 1243, 1763
BstAPI GCANNNNNTGC 1 cut(s) 476
BstDEI CTNAG 8 cut(s) 444, 458, 486, 588, 628, 948, 955, 1158
BstDSI CCRYGG 1 cut(s) 252
BstEII GGTNACC 1 cut(s) 1865
BstF5I GGATG 2 cut(s) 358, 1078
BstHHI GCGC 2 cut(s) 405, 1090
BstKTI GATC 9 cut(s) 157, 358, 505, 600, 875, 954, 1016, 1209, 1249
BstMAI GTCTC 2 cut(s) 1396, 1735
BstMBI GATC 9 cut(s) 154, 355, 502, 597, 872, 951, 1013, 1206, 1246
BstMWI GCNNNNNNNGC 4 cut(s) 476, 1676, 1679, 1712
BstNI CCWGG 2 cut(s) 408, 539
BstPI GGTNACC 1 cut(s) 1865
BstSCI CCNGG 5 cut(s) 134, 406, 537, 1715, 1716
BstSLI GKGCMC 1 cut(s) 651
BstV1I GCAGC 6 cut(s) 1246, 1682, 1685, 1688, 1691, 1718
BstV2I GAAGAC 2 cut(s) 43, 498
BstX2I RGATCY 2 cut(s) 951, 1206
BstYI RGATCY 2 cut(s) 951, 1206
Bsu15I ATCGAT 1 cut(s) 204
BsuRI GGCC 4 cut(s) 229, 885, 925, 1784
BsuTUI ATCGAT 1 cut(s) 204
BtgI CCRYGG 1 cut(s) 252
BtsCI GGATG 2 cut(s) 358, 1078
BtsI GCAGTG 1 cut(s) 651
BtsIMutI CAGTG 3 cut(s) 532, 651, 963
BveI ACCTGC 1 cut(s) 79
CfoI GCGC 2 cut(s) 405, 1090
Cfr13I GGNCC 4 cut(s) 227, 535, 923, 1783
Cfr9I CCCGGG 1 cut(s) 1716
ClaI ATCGAT 1 cut(s) 204
CseI GACGC 1 cut(s) 437
CsiI ACCWGGT 1 cut(s) 537
Csp6I GTAC 6 cut(s) 139, 184, 520, 1067, 1290, 1759
CviAII CATG 9 cut(s) 236, 253, 290, 298, 344, 641, 892, 968, 1072
CviQI GTAC 6 cut(s) 139, 184, 520, 1067, 1290, 1759
DdeI CTNAG 8 cut(s) 444, 458, 486, 588, 628, 948, 955, 1158
DpnI GATC 9 cut(s) 156, 357, 504, 599, 874, 953, 1015, 1208, 1248
DpnII GATC 9 cut(s) 154, 355, 502, 597, 872, 951, 1013, 1206, 1246
DriI GACNNNNNGTC 1 cut(s) 447
Eam1105I GACNNNNNGTC 1 cut(s) 447
Eco130I CCWWGG 3 cut(s) 252, 938, 1870
Eco24I GRGCYC 2 cut(s) 343, 1717
Eco32I GATATC 1 cut(s) 193
Eco47I GGWCC 1 cut(s) 535
Eco57I CTGAAG 1 cut(s) 1323
Eco88I CYCGRG 1 cut(s) 1716
Eco91I GGTNACC 1 cut(s) 1865
EcoO109I RGGNCCY 2 cut(s) 535, 923
EcoO65I GGTNACC 1 cut(s) 1865
EcoRII CCWGG 2 cut(s) 406, 537
EcoRV GATATC 1 cut(s) 193
EcoT14I CCWWGG 3 cut(s) 252, 938, 1870
EcoT38I GRGCYC 2 cut(s) 343, 1717
ErhI CCWWGG 3 cut(s) 252, 938, 1870
FaeI CATG 9 cut(s) 239, 256, 293, 301, 347, 644, 895, 971, 1075
FaqI GGGAC 1 cut(s) 548
FatI CATG 9 cut(s) 235, 252, 289, 297, 343, 640, 891, 967, 1071
FauI CCCGC 2 cut(s) 1162, 1882
FbaI TGATCA 1 cut(s) 355
Fnu4HI GCNGC 6 cut(s) 1260, 1671, 1674, 1677, 1680, 1707
FokI GGATG 2 cut(s) 365, 1065
FriOI GRGCYC 2 cut(s) 343, 1717
Fsp4HI GCNGC 6 cut(s) 1260, 1671, 1674, 1677, 1680, 1707
FspBI CTAG 6 cut(s) 999, 1143, 1362, 1737, 1806, 1839
GlaI GCGC 2 cut(s) 404, 1089
GluI GCNGC 6 cut(s) 1260, 1671, 1674, 1677, 1680, 1707
GsuI CTGGAG 1 cut(s) 508
HaeIII GGCC 4 cut(s) 229, 885, 925, 1784
HapII CCGG 4 cut(s) 123, 135, 278, 1717
HgaI GACGC 1 cut(s) 437
HhaI GCGC 2 cut(s) 405, 1090
Hin1II CATG 9 cut(s) 239, 256, 293, 301, 347, 644, 895, 971, 1075
Hin6I GCGC 2 cut(s) 403, 1088
HinP1I GCGC 2 cut(s) 403, 1088
HinfI GANTC 5 cut(s) 14, 116, 934, 1109, 1271
HpaII CCGG 4 cut(s) 123, 135, 278, 1717
HphI GGTGA 8 cut(s) 157, 200, 241, 398, 849, 907, 1877, 1895
Hpy166II GTNNAC 2 cut(s) 313, 898
Hpy188I TCNGA 4 cut(s) 159, 177, 589, 1018
Hpy188III TCNNGA 2 cut(s) 694, 814
Hpy8I GTNNAC 2 cut(s) 313, 898
HpyAV CCTTC 9 cut(s) 284, 575, 739, 901, 968, 1043, 1547, 1680, 1856
HpyCH4III ACNGT 5 cut(s) 27, 188, 841, 1243, 1763
HpyCH4IV ACGT 2 cut(s) 495, 701
HpyCH4V TGCA 6 cut(s) 293, 470, 479, 644, 1023, 1262
HpyF10VI GCNNNNNNNGC 4 cut(s) 476, 1676, 1679, 1712
HpyF3I CTNAG 8 cut(s) 444, 458, 486, 588, 628, 948, 955, 1158
HpySE526I ACGT 2 cut(s) 495, 701
Hsp92II CATG 9 cut(s) 239, 256, 293, 301, 347, 644, 895, 971, 1075
HspAI GCGC 2 cut(s) 403, 1088
Ksp22I TGATCA 1 cut(s) 355
Kzo9I GATC 9 cut(s) 154, 355, 502, 597, 872, 951, 1013, 1206, 1246
LmnI GCTCC 6 cut(s) 515, 710, 831, 1396, 1690, 1849
Lsp1109I GCAGC 6 cut(s) 1246, 1682, 1685, 1688, 1691, 1718
MabI ACCWGGT 1 cut(s) 537
MaeI CTAG 6 cut(s) 999, 1143, 1362, 1737, 1806, 1839
MaeII ACGT 2 cut(s) 495, 701
MaeIII GTNAC 7 cut(s) 66, 208, 449, 716, 963, 1228, 1865
MalI GATC 9 cut(s) 156, 357, 504, 599, 874, 953, 1015, 1208, 1248
MboI GATC 9 cut(s) 154, 355, 502, 597, 872, 951, 1013, 1206, 1246
MflI RGATCY 2 cut(s) 951, 1206
MhlI GDGCHC 4 cut(s) 343, 651, 836, 1717
MluCI AATT 6 cut(s) 334, 462, 613, 817, 1027, 1150
MlyI GAGTC 1 cut(s) 1103
MmeI TCCRAC 2 cut(s) 530, 809
MseI TTAA 3 cut(s) 465, 734, 1044
MslI CAYNNNNRTG 2 cut(s) 251, 839
MspI CCGG 4 cut(s) 123, 135, 278, 1717
MspR9I CCNGG 5 cut(s) 136, 408, 539, 1717, 1718
MvaI CCWGG 2 cut(s) 408, 539
MwoI GCNNNNNNNGC 4 cut(s) 476, 1676, 1679, 1712
NciI CCSGG 3 cut(s) 136, 1717, 1718
NcoI CCATGG 1 cut(s) 252
NdeII GATC 9 cut(s) 154, 355, 502, 597, 872, 951, 1013, 1206, 1246
NlaIII CATG 9 cut(s) 239, 256, 293, 301, 347, 644, 895, 971, 1075
NlaIV GGNNCC 6 cut(s) 133, 258, 328, 536, 712, 924
NmuCI GTSAC 2 cut(s) 449, 1865
OliI CACNNNNGTG 1 cut(s) 839
PcsI WCGNNNNNNNCGW 1 cut(s) 210
PfeI GAWTC 4 cut(s) 14, 116, 934, 1271
PflMI CCANNNNNTGG 1 cut(s) 1084
PkrI GCNGC 6 cut(s) 1261, 1672, 1675, 1678, 1681, 1708
PleI GAGTC 1 cut(s) 1103
PpsI GAGTC 1 cut(s) 1103
PpuMI RGGWCCY 1 cut(s) 535
PshBI ATTAAT 1 cut(s) 465
Psp1406I AACGTT 1 cut(s) 701
Psp5II RGGWCCY 1 cut(s) 535
Psp6I CCWGG 2 cut(s) 406, 537
PspEI GGTNACC 1 cut(s) 1865
PspGI CCWGG 2 cut(s) 406, 537
PspN4I GGNNCC 6 cut(s) 133, 258, 328, 536, 712, 924
PspPI GGNCC 4 cut(s) 227, 535, 923, 1783
PspPPI RGGWCCY 1 cut(s) 535
PsuI RGATCY 2 cut(s) 951, 1206
RsaI GTAC 6 cut(s) 140, 185, 521, 1068, 1291, 1760
RsaNI GTAC 6 cut(s) 139, 184, 520, 1067, 1290, 1759
RseI CAYNNNNRTG 2 cut(s) 251, 839
SaqAI TTAA 3 cut(s) 465, 734, 1044
SatI GCNGC 6 cut(s) 1260, 1671, 1674, 1677, 1680, 1707
Sau3AI GATC 9 cut(s) 154, 355, 502, 597, 872, 951, 1013, 1206, 1246
Sau96I GGNCC 4 cut(s) 227, 535, 923, 1783
SchI GAGTC 1 cut(s) 1103
ScrFI CCNGG 5 cut(s) 136, 408, 539, 1717, 1718
SduI GDGCHC 4 cut(s) 343, 651, 836, 1717
SexAI ACCWGGT 1 cut(s) 537
SinI GGWCC 1 cut(s) 535
SmaI CCCGGG 1 cut(s) 1718
SmiMI CAYNNNNRTG 2 cut(s) 251, 839
Sse9I AATT 6 cut(s) 334, 462, 613, 817, 1027, 1150
SsiI CCGC 3 cut(s) 1169, 1214, 1889
SspI AATATT 1 cut(s) 790
SspMI CTAG 6 cut(s) 999, 1143, 1362, 1737, 1806, 1839
StyD4I CCNGG 5 cut(s) 134, 406, 537, 1715, 1716
StyI CCWWGG 3 cut(s) 252, 938, 1870
TaaI ACNGT 5 cut(s) 27, 188, 841, 1243, 1763
TaiI ACGT 2 cut(s) 498, 704
TaqI TCGA 4 cut(s) 204, 552, 1245, 1284
TaqII GACCGA 1 cut(s) 558
TasI AATT 6 cut(s) 334, 462, 613, 817, 1027, 1150
TatI WGTACW 2 cut(s) 1289, 1758
TfiI GAWTC 4 cut(s) 14, 116, 934, 1271
Tru1I TTAA 3 cut(s) 465, 734, 1044
Tru9I TTAA 3 cut(s) 465, 734, 1044
TscAI CASTG 3 cut(s) 532, 651, 963
TseFI GTSAC 2 cut(s) 449, 1865
TseI GCWGC 6 cut(s) 1259, 1670, 1673, 1676, 1679, 1706
Tsp45I GTSAC 2 cut(s) 449, 1865
TspDTI ATGAA 4 cut(s) 34, 235, 383, 880
TspGWI ACGGA 1 cut(s) 235
TspMI CCCGGG 1 cut(s) 1716
TspRI CASTG 3 cut(s) 532, 651, 963
Van91I CCANNNNNTGG 1 cut(s) 1084
VpaK11BI GGWCC 1 cut(s) 535
VspI ATTAAT 1 cut(s) 465
XapI RAATTY 2 cut(s) 613, 1027
XcmI CCANNNNNNNNNTGG 2 cut(s) 320, 1877
XmaI CCCGGG 1 cut(s) 1716
XspI CTAG 6 cut(s) 999, 1143, 1362, 1737, 1806, 1839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.