Rroxscaffold_2G00140750

Cupin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0012303
Physical Location & Seq
Forward (+)
79053823 .. 79056993
3171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00140750.1

Sequence Viewer

Length: 1914 bp
ATGTCTGACAACGATTCAAATCCACCGTTTTCACTTACTCTGTTCATCTTATTCTTCTTTCTTTCACTACCTGCCTTCTCTTCCTCTTTGAAGTCTTTGAAAAATGAGGAGGATTTTTCCAGTAGTGATGCCGGGTATCTGGTGAGGAGAGCTCAGAGGAGGGCGTTGGTTCAGACAGAGTACGGAGAAATCTCGTCCATTAATGTCACCGATGGACGGAGAGGGCCTTACCATGTCCAGTTCATCACCATGGAACCCAACTCGCTGTTCCTTCCGGTGCTGCTACACTCTGACATGGTCTTCTATGTCCACACAGGGAGTGGGAGGTTGAATTGGGCTCATGGAAAGGATGATCAAATCAACGAGGTTCCTTTAAAGCAAGGTGATATCCATAGACTCCGCCCAGGCTCTGTCTTCTTTGTACAGAGTGATTTACAGACCGAGCGTCAGAAACTTAGAATTAATGCAATCTTTGCAAATAGCGATGATGACGACCCAACAATAGGAGCATACTCCAGTGTTAGGGACCTGGTCCGAGGCTTCGACACCAAAATCCTTCGGTCAGCTTTTCAGGTTTCTGAGGATGTGATCGAGTCGATAACAAATTCAACAGACCAATCAGCCATTATCCATGCAGTGCCAACGAAGAAAGAAACCTTTTGGGATTTGGAAGCTCGGTTCTTGAAAACCTTTATAGGAGCCAGTTATGATGGCATGGCATTAAACAAGAAGAAGCATAAGAAGAAAGAAAAATCAAAAACATATAATATTTTTGATGAGGACCCAGATTTCAAGAATTGTAACGGTTGGAGCCTCACCGTGAATGAGAGAAACTCGCCTTCATTGACTGGATCAAACATTGGTCTTTTCATGGTGAACTTGACGAAGGGTTCAATGATGGGGCCTCATTGGAATCCAAGGGCAACTGAGATCGCAGTTGTGTTACAGGGGCAAGGAATGGTCAGGGTGGTTTGTGCTAGCACAGCAAAGAGATCAGAGTGCAGAAATTTGACGTTTAGGGTTCATGAAGGAGATGTATTTGCTGTACCTATGTTCCATCCAATGGCTCAGATGTCATATAATAATGACTCATTTGTGTTTATGGGGTTCAGCACGACAACAAGGAGAAATTATCCTCAATTTTTGGCTGGTAAATACTCGGTTCTCCAAACTTTGAACAGACAGGTCTTGGCAGTTTCTTTGAATGTTACCAACACCACAATCGATCAGCTTTTGGCTGCACAAACAGAATCAATCATACTCGACTGTACTTCTTGCGCTGAAAAAGAGGAGAAAGTAATGTTGGAAGAAATTGAAAAGGAAAGGGAGGAAGAGGAGGCTAAGAAGAGAGAGGAACAGAGGAAGAGAGAAGAGGAGCAAAGGAAGAGAGAGGAGGAGCAGAGACAGAGAGAGGAGGAGGAAGAGAGAAAGAGAGAGGAGAGGAGGAAGCGAGAAGAGGAGCAAAGGGAGAGAGAGGAGAAGAAGAGACAGAGAGAGAAGGAGGAAGCGAGAAAGAGAGAAGAGGAAGAAGAGAGGAGGAAGAGAGAAGAGGAGGAAGAAGAAGAGAGGAGGAAGAGAGAAGAGGAGGAAGAAGAAGAGAGGAGAAGGAGAGAAGAAGAAAAAAGAGAGGAGGAAGAACAAGAGAGGGAGAGGCAACAGGAAGAAGAAGGAGAAGCAGCAGAAAGGGAGCAAGAAGAGGCTAGGAGGCAAGAGGAAGAAGCAGAGAGTGAGAAAGAAGACACCAGGAGGCAACAACAAGAGGAGTATAGTAAAAGAAAAGAGAAAGAGGCCCAAACAGAGCAAGAGGAGGCTAGGAAACAACAAGAGGAAATAGAAGGAAGAACCAGACCGAAGGAGCAAGAGACGGAAGGTGACCAACGTTTTGACGGTGAAGGGGGAAGAAGAGAAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0043207 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0098542
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cupin_1

Protein Analysis

637

Amino Acids

75.05

Weight (kDa)

5.16

Isoelectric Point (pI)

86.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cupin_1 PF00190 255 - 408 6.5e-38 Cupin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012303)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36700
fragaria_vesca FvH4_1g13730 FvH4_1g13730 FvH4_1g13730
malus_domestica MD02G1152000.v1.1 MD15G1266400.v1.1
prunus_persica Prupe.7G151000_v2.0.a1 Prupe.7G151000_v2.0.a1
pyrus_communis pycom02g11940
rosa_chinensis RchiOBHm_Chr2g0102141
rosa_laevigata RLG00000017133
rosa_roxburghii Rroxscaffold_2G00140750
rosa_rugosa Rorug02G0104600 Rorug02G0104700
rosa_samantha Rh2AG153100 Rh2BG159000 Rh2CG158300 Rh2DG158700
rosa_wichuraiana Rw2G011950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 79
AccB7I CCANNNNNTGG 1 cut(s) 1063
AciI CCGC 1 cut(s) 400
AclI AACGTT 1 cut(s) 1879
AclWI GGATC 1 cut(s) 859
AcsI RAATTY 3 cut(s) 604, 1006, 1908
AfaI GTAC 4 cut(s) 182, 423, 1047, 1270
AfiI CCNNNNNNNGG 4 cut(s) 216, 503, 522, 1063
AhdI GACNNNNNGTC 1 cut(s) 444
AjnI CCWGG 3 cut(s) 403, 528, 1742
AjuI GAANNNNNNNTTGG 4 cut(s) 251, 283, 1286, 1318
AloI GAACNNNNNNTCC 2 cut(s) 662, 694
AluBI AGCT 4 cut(s) 152, 566, 674, 1231
AluI AGCT 4 cut(s) 152, 566, 674, 1231
Alw21I GWGCWC 1 cut(s) 154
Alw26I GTCTC 3 cut(s) 1396, 1480, 1856
AlwI GGATC 1 cut(s) 859
AlwNI CAGNNNCTG 1 cut(s) 410
AoxI GGCC 3 cut(s) 224, 902, 1788
ApeKI GCWGC 3 cut(s) 280, 1238, 1676
ApoI RAATTY 3 cut(s) 604, 1006, 1908
ArsI GACNNNNNNTTYG 2 cut(s) 1865, 1897
AseI ATTAAT 2 cut(s) 201, 462
AspLEI GCGC 1 cut(s) 1280
AspS9I GGNCC 6 cut(s) 224, 526, 532, 781, 902, 1789
AsuC2I CCSGG 1 cut(s) 133
AsuHPI GGTGA 8 cut(s) 154, 199, 238, 395, 808, 886, 1883, 1901
AsuNHI GCTAGC 1 cut(s) 977
AvaII GGWCC 3 cut(s) 526, 532, 781
BanII GRGCYC 2 cut(s) 154, 340
BbsI GAAGAC 3 cut(s) 292, 406, 1743
Bbv12I GWGCWC 1 cut(s) 154
BbvI GCAGC 3 cut(s) 267, 1225, 1688
BccI CCATC 4 cut(s) 206, 704, 892, 1065
BciT130I CCWGG 3 cut(s) 405, 530, 1744
BclI TGATCA 1 cut(s) 352
BcnI CCSGG 1 cut(s) 133
BcoDI GTCTC 3 cut(s) 1396, 1480, 1856
BfaI CTAG 3 cut(s) 978, 1701, 1812
BfuAI ACCTGC 1 cut(s) 79
BisI GCNGC 3 cut(s) 281, 1239, 1677
BlsI GCNGC 3 cut(s) 282, 1240, 1678
Bme1390I CCNGG 4 cut(s) 133, 405, 530, 1744
Bme18I GGWCC 3 cut(s) 526, 532, 781
BmeRI GACNNNNNGTC 1 cut(s) 444
BmgT120I GGNCC 6 cut(s) 224, 526, 532, 781, 902, 1789
BmiI GGNNCC 7 cut(s) 255, 369, 527, 700, 783, 812, 903
BmrFI CCNGG 4 cut(s) 133, 405, 530, 1744
BmsI GCATC 1 cut(s) 118
BmtI GCTAGC 1 cut(s) 981
BpiI GAAGAC 3 cut(s) 292, 406, 1743
BplI GAGNNNNNCTC 4 cut(s) 136, 168, 818, 850
BpmI CTGGAG 1 cut(s) 499
BpuMI CCSGG 1 cut(s) 133
Bsa29I ATCGAT 1 cut(s) 1224
BsaBI GATNNNNATC 1 cut(s) 18
BsaJI CCNNGG 4 cut(s) 249, 403, 535, 917
BsaWI WCCGGW 1 cut(s) 274
Bsc4I CCNNNNNNNGG 4 cut(s) 216, 503, 522, 1063
Bse1I ACTGG 5 cut(s) 120, 238, 516, 702, 853
Bse8I GATNNNNATC 1 cut(s) 18
BseBI CCWGG 3 cut(s) 405, 530, 1744
BseCI ATCGAT 1 cut(s) 1224
BseDI CCNNGG 4 cut(s) 249, 403, 535, 917
BseGI GGATG 3 cut(s) 355, 589, 1057
BseJI GATNNNNATC 1 cut(s) 18
BseLI CCNNNNNNNGG 4 cut(s) 216, 503, 522, 1063
BseMII CTCAG 4 cut(s) 167, 570, 918, 1082
BseNI ACTGG 5 cut(s) 120, 238, 516, 702, 853
BseXI GCAGC 3 cut(s) 267, 1225, 1688
BsgI GTGCAG 2 cut(s) 1021, 1224
BshFI GGCC 3 cut(s) 226, 904, 1790
BshVI ATCGAT 1 cut(s) 1224
BsiHKAI GWGCWC 1 cut(s) 154
BsiSI CCGG 2 cut(s) 132, 275
BslFI GGGAC 1 cut(s) 539
BslI CCNNNNNNNGG 4 cut(s) 216, 503, 522, 1063
BsmAI GTCTC 3 cut(s) 1396, 1480, 1856
BsmBI CGTCTC 1 cut(s) 1856
BsmFI GGGAC 1 cut(s) 539
BsnI GGCC 3 cut(s) 226, 904, 1790
Bsp1286I GDGCHC 2 cut(s) 154, 340
Bsp1407I TGTACA 1 cut(s) 421
Bsp143I GATC 6 cut(s) 352, 588, 851, 930, 992, 1225
Bsp19I CCATGG 1 cut(s) 249
BspACI CCGC 1 cut(s) 400
BspANI GGCC 3 cut(s) 226, 904, 1790
BspCNI CTCAG 4 cut(s) 166, 571, 919, 1081
BspDI ATCGAT 1 cut(s) 1224
BspHI TCATGA 1 cut(s) 1024
BspLI GGNNCC 7 cut(s) 255, 369, 527, 700, 783, 812, 903
BspMI ACCTGC 1 cut(s) 79
BspOI GCTAGC 1 cut(s) 981
BspPI GGATC 1 cut(s) 859
BsrGI TGTACA 1 cut(s) 421
BsrI ACTGG 5 cut(s) 120, 238, 516, 702, 853
BssECI CCNNGG 4 cut(s) 249, 403, 535, 917
BssMI GATC 6 cut(s) 352, 588, 851, 930, 992, 1225
BssT1I CCWWGG 2 cut(s) 249, 917
Bst2UI CCWGG 3 cut(s) 405, 530, 1744
Bst4CI ACNGT 5 cut(s) 27, 806, 820, 1268, 1889
BstAPI GCANNNNNTGC 1 cut(s) 473
BstAUI TGTACA 1 cut(s) 421
BstC8I GCNNGC 1 cut(s) 979
BstDEI CTNAG 6 cut(s) 153, 455, 579, 927, 1068, 1341
BstDSI CCRYGG 1 cut(s) 249
BstEII GGTNACC 1 cut(s) 1871
BstF5I GGATG 3 cut(s) 355, 589, 1057
BstHHI GCGC 1 cut(s) 1280
BstKTI GATC 6 cut(s) 355, 591, 854, 933, 995, 1228
BstMAI GTCTC 3 cut(s) 1396, 1480, 1856
BstMBI GATC 6 cut(s) 352, 588, 851, 930, 992, 1225
BstMWI GCNNNNNNNGC 2 cut(s) 473, 983
BstNI CCWGG 3 cut(s) 405, 530, 1744
BstPI GGTNACC 1 cut(s) 1871
BstSCI CCNGG 4 cut(s) 131, 403, 528, 1742
BstV1I GCAGC 3 cut(s) 267, 1225, 1688
BstV2I GAAGAC 3 cut(s) 292, 406, 1743
Bsu15I ATCGAT 1 cut(s) 1224
BsuRI GGCC 3 cut(s) 226, 904, 1790
BsuTUI ATCGAT 1 cut(s) 1224
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 1 cut(s) 498
BtsCI GGATG 3 cut(s) 355, 589, 1057
BtsI GCAGTG 1 cut(s) 642
BtsIMutI CAGTG 2 cut(s) 523, 642
BveI ACCTGC 1 cut(s) 79
Cac8I GCNNGC 1 cut(s) 979
CaiI CAGNNNCTG 1 cut(s) 410
CciI TCATGA 1 cut(s) 1024
CfoI GCGC 1 cut(s) 1280
Cfr13I GGNCC 6 cut(s) 224, 526, 532, 781, 902, 1789
ClaI ATCGAT 1 cut(s) 1224
CseI GACGC 1 cut(s) 434
CsiI ACCWGGT 1 cut(s) 528
Csp6I GTAC 4 cut(s) 181, 422, 1046, 1269
CviAII CATG 8 cut(s) 233, 250, 295, 341, 632, 715, 871, 1025
CviQI GTAC 4 cut(s) 181, 422, 1046, 1269
DdeI CTNAG 6 cut(s) 153, 455, 579, 927, 1068, 1341
DpnI GATC 6 cut(s) 354, 590, 853, 932, 994, 1227
DpnII GATC 6 cut(s) 352, 588, 851, 930, 992, 1225
DraI TTTAAA 1 cut(s) 375
DriI GACNNNNNGTC 1 cut(s) 444
Eam1105I GACNNNNNGTC 1 cut(s) 444
EciI GGCGGA 1 cut(s) 389
Ecl136II GAGCTC 1 cut(s) 152
Eco130I CCWWGG 2 cut(s) 249, 917
Eco24I GRGCYC 2 cut(s) 154, 340
Eco32I GATATC 1 cut(s) 388
Eco47I GGWCC 3 cut(s) 526, 532, 781
Eco53kI GAGCTC 1 cut(s) 152
Eco91I GGTNACC 1 cut(s) 1871
EcoICRI GAGCTC 1 cut(s) 152
EcoO109I RGGNCCY 4 cut(s) 224, 526, 781, 902
EcoO65I GGTNACC 1 cut(s) 1871
EcoRII CCWGG 3 cut(s) 403, 528, 1742
EcoRV GATATC 1 cut(s) 388
EcoT14I CCWWGG 2 cut(s) 249, 917
EcoT38I GRGCYC 2 cut(s) 154, 340
ErhI CCWWGG 2 cut(s) 249, 917
Esp3I CGTCTC 1 cut(s) 1856
FaeI CATG 8 cut(s) 236, 253, 298, 344, 635, 718, 874, 1028
FaqI GGGAC 1 cut(s) 539
FatI CATG 8 cut(s) 232, 249, 294, 340, 631, 714, 870, 1024
FbaI TGATCA 1 cut(s) 352
Fnu4HI GCNGC 3 cut(s) 281, 1239, 1677
FokI GGATG 3 cut(s) 362, 596, 1044
FriOI GRGCYC 2 cut(s) 154, 340
Fsp4HI GCNGC 3 cut(s) 281, 1239, 1677
FspBI CTAG 3 cut(s) 978, 1701, 1812
GlaI GCGC 1 cut(s) 1279
GluI GCNGC 3 cut(s) 281, 1239, 1677
GsuI CTGGAG 1 cut(s) 499
HaeIII GGCC 3 cut(s) 226, 904, 1790
HapII CCGG 2 cut(s) 132, 275
HgaI GACGC 1 cut(s) 434
HhaI GCGC 1 cut(s) 1280
Hin1II CATG 8 cut(s) 236, 253, 298, 344, 635, 718, 874, 1028
Hin6I GCGC 1 cut(s) 1278
HinP1I GCGC 1 cut(s) 1278
HinfI GANTC 6 cut(s) 14, 396, 593, 913, 1088, 1250
HpaII CCGG 2 cut(s) 132, 275
HphI GGTGA 8 cut(s) 154, 199, 238, 395, 808, 886, 1883, 1901
Hpy166II GTNNAC 2 cut(s) 310, 877
Hpy188I TCNGA 9 cut(s) 7, 156, 174, 292, 450, 536, 580, 997, 1071
Hpy188III TCNNGA 3 cut(s) 682, 793, 1025
Hpy8I GTNNAC 2 cut(s) 310, 877
HpyCH4III ACNGT 5 cut(s) 27, 806, 820, 1268, 1889
HpyCH4IV ACGT 2 cut(s) 1013, 1879
HpyCH4V TGCA 5 cut(s) 467, 476, 635, 1002, 1241
HpyF10VI GCNNNNNNNGC 2 cut(s) 473, 983
HpyF3I CTNAG 6 cut(s) 153, 455, 579, 927, 1068, 1341
HpySE526I ACGT 2 cut(s) 1013, 1879
Hsp92II CATG 8 cut(s) 236, 253, 298, 344, 635, 718, 874, 1028
HspAI GCGC 1 cut(s) 1278
Ksp22I TGATCA 1 cut(s) 352
Kzo9I GATC 6 cut(s) 352, 588, 851, 930, 992, 1225
LmnI GCTCC 8 cut(s) 506, 698, 810, 1375, 1396, 1459, 1687, 1855
Lsp1109I GCAGC 3 cut(s) 267, 1225, 1688
LweI GCATC 1 cut(s) 118
MabI ACCWGGT 1 cut(s) 528
MaeI CTAG 3 cut(s) 978, 1701, 1812
MaeII ACGT 2 cut(s) 1013, 1879
MaeIII GTNAC 5 cut(s) 205, 800, 942, 1207, 1871
MalI GATC 6 cut(s) 354, 590, 853, 932, 994, 1227
MboI GATC 6 cut(s) 352, 588, 851, 930, 992, 1225
MhlI GDGCHC 2 cut(s) 154, 340
MluCI AATT 9 cut(s) 331, 459, 604, 796, 1006, 1129, 1139, 1311, 1908
MlyI GAGTC 3 cut(s) 390, 602, 1082
MmeI TCCRAC 2 cut(s) 788, 1284
MseI TTAA 4 cut(s) 201, 374, 462, 722
MslI CAYNNNNRTG 1 cut(s) 248
MspI CCGG 2 cut(s) 132, 275
MspR9I CCNGG 4 cut(s) 133, 405, 530, 1744
MvaI CCWGG 3 cut(s) 405, 530, 1744
MwoI GCNNNNNNNGC 2 cut(s) 473, 983
NciI CCSGG 1 cut(s) 133
NcoI CCATGG 1 cut(s) 249
NdeII GATC 6 cut(s) 352, 588, 851, 930, 992, 1225
NheI GCTAGC 1 cut(s) 977
NlaIII CATG 8 cut(s) 236, 253, 298, 344, 635, 718, 874, 1028
NlaIV GGNNCC 7 cut(s) 255, 369, 527, 700, 783, 812, 903
NmuCI GTSAC 2 cut(s) 205, 1871
PagI TCATGA 1 cut(s) 1024
PfeI GAWTC 3 cut(s) 14, 913, 1250
PflFI GACNNNGTC 2 cut(s) 296, 530
PflMI CCANNNNNTGG 1 cut(s) 1063
PkrI GCNGC 3 cut(s) 282, 1240, 1678
PleI GAGTC 3 cut(s) 390, 601, 1082
PpsI GAGTC 3 cut(s) 390, 601, 1082
PpuMI RGGWCCY 2 cut(s) 526, 781
PshBI ATTAAT 2 cut(s) 201, 462
Psp124BI GAGCTC 1 cut(s) 154
Psp1406I AACGTT 1 cut(s) 1879
Psp5II RGGWCCY 2 cut(s) 526, 781
Psp6I CCWGG 3 cut(s) 403, 528, 1742
PspEI GGTNACC 1 cut(s) 1871
PspGI CCWGG 3 cut(s) 403, 528, 1742
PspN4I GGNNCC 7 cut(s) 255, 369, 527, 700, 783, 812, 903
PspPI GGNCC 6 cut(s) 224, 526, 532, 781, 902, 1789
PspPPI RGGWCCY 2 cut(s) 526, 781
PstNI CAGNNNCTG 1 cut(s) 410
PsyI GACNNNGTC 2 cut(s) 296, 530
RsaI GTAC 4 cut(s) 182, 423, 1047, 1270
RsaNI GTAC 4 cut(s) 181, 422, 1046, 1269
RseI CAYNNNNRTG 1 cut(s) 248
SacI GAGCTC 1 cut(s) 154
SaqAI TTAA 4 cut(s) 201, 374, 462, 722
SatI GCNGC 3 cut(s) 281, 1239, 1677
Sau3AI GATC 6 cut(s) 352, 588, 851, 930, 992, 1225
Sau96I GGNCC 6 cut(s) 224, 526, 532, 781, 902, 1789
SchI GAGTC 3 cut(s) 390, 602, 1082
ScrFI CCNGG 4 cut(s) 133, 405, 530, 1744
SduI GDGCHC 2 cut(s) 154, 340
SexAI ACCWGGT 1 cut(s) 528
SfaNI GCATC 1 cut(s) 118
SinI GGWCC 3 cut(s) 526, 532, 781
SmiMI CAYNNNNRTG 1 cut(s) 248
Sse9I AATT 9 cut(s) 331, 459, 604, 796, 1006, 1129, 1139, 1311, 1908
SsiI CCGC 1 cut(s) 400
SspI AATATT 1 cut(s) 769
SspMI CTAG 3 cut(s) 978, 1701, 1812
SstI GAGCTC 1 cut(s) 154
StyD4I CCNGG 4 cut(s) 131, 403, 528, 1742
StyI CCWWGG 2 cut(s) 249, 917
TaaI ACNGT 5 cut(s) 27, 806, 820, 1268, 1889
TaiI ACGT 2 cut(s) 1016, 1882
TaqI TCGA 5 cut(s) 543, 591, 596, 1224, 1263
TaqII GACCGA 3 cut(s) 455, 549, 1864
TasI AATT 9 cut(s) 331, 459, 604, 796, 1006, 1129, 1139, 1311, 1908
TatI WGTACW 2 cut(s) 421, 1268
TfiI GAWTC 3 cut(s) 14, 913, 1250
Tru1I TTAA 4 cut(s) 201, 374, 462, 722
Tru9I TTAA 4 cut(s) 201, 374, 462, 722
TscAI CASTG 2 cut(s) 523, 642
TseFI GTSAC 2 cut(s) 205, 1871
TseI GCWGC 3 cut(s) 280, 1238, 1676
Tsp45I GTSAC 2 cut(s) 205, 1871
TspDTI ATGAA 6 cut(s) 34, 232, 831, 859, 1013, 1041
TspGWI ACGGA 3 cut(s) 198, 232, 1880
TspRI CASTG 2 cut(s) 523, 642
Tth111I GACNNNGTC 2 cut(s) 296, 530
Van91I CCANNNNNTGG 1 cut(s) 1063
VpaK11BI GGWCC 3 cut(s) 526, 532, 781
VspI ATTAAT 2 cut(s) 201, 462
XapI RAATTY 3 cut(s) 604, 1006, 1908
XcmI CCANNNNNNNNNTGG 1 cut(s) 317
XspI CTAG 3 cut(s) 978, 1701, 1812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.