Rorug02G0104600

phosphatase 2c

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0011198
Physical Location & Seq
Reverse (-)
8930799 .. 8935902
5104 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0104600.1

Sequence Viewer

Length: 2292 bp
ATGGCTTCTTTTTGTTCTGCTTGGAGAAGAAGCAGTCTTCTTTTCATGTTGCTTTGTGTTCTTGTTGCTCAGATTAGCACTTGTTTTTCATCCAAGGTGTATGTGGTTTATATGGGAAGCAAAAATGGTGAAGACCCAGATGAGATTCTGGCGCAAAACCATCAAATACTTGCTTCTGTTCACACAGGAAGCATAGAGGAAGCTCAAGCATCTCACATTCATAGTTACCGACATGGTTTTAAAGGCTTTGCTGCCAGGTTGACTGATCAGCAAGCTTTCCAAATTTCAAAGATGCCTGGAGTTGTTTCGGTTTTTCCCAACTCGAAAAGGAGTTTGCACACCACTCATTCTTGGGATTTCATGGGTCTTTTGGGTGAACAGACCTTGGAGGTTTCCGGCTTTAACATCAAGAATCAAGTAAATGTCATTGTCGGTTTCATTGATACTGGAATTTGGCCTGAATCTCCAAGTTTTAATGATGACAAAATGCCTCCAGTGCCAGCTAGATGGAAGGGGGTTTGTCAATCAGGAGAGGCATTCAATGCTTCAACTTGCAACAGAAAAGTGATTGGGGCTAGATACTATAAGTCCGGTTATGAAGCCGAGGAAGATTCAGCGGACACAGTGGCATTCAGTTCTCCAAGGGACAGTGCCGGTCATGGCAGCCACACAGCCTCTATAGCTGCTGGTCGTTATGTGTCAAACATGACTTATAAGGGATTGGCATCTGGAGGAGCTAGAGGAGGTGCACCAATGGCTAGGATTGCAGTATACAAAACTTGTTGGGACACTGGTTGTTATGACGTAGACTTACTAGCAGCTTTTGATGATGCAATTAGAGATGGGGTTCACATTCTGTCTCTGTCTCTCGGGCCTGATGCTCCTCAGGGAGACTATTTTATTGATGCCATTTCTGTGGGGTCATTCCATGCTGCTAGGCATGGAATTTTAGTGGTTGCTTCTGCTGGAAATGAAGGAAACCCGGGTTCTGTAACAAATCTCGCCCCATGGATGATTACTGTTGCTGCAAGTTCAACGGATAGGGATTTCACTTCTGATATCGTTCTTGGAAATGGTGTTAATGTCACGGGTGAAAGCCTCAGTGTCTTTGGAATGAAAGCCTCAGCAAGCATCATTTCCGCCTCTGAAGCCTTTGCAGGGTACTTCACTCCATATCAATCCAGTTATTGTTTAGAAAGTTCCTTGAACAAGACCAAGGCCAGAGGGAAGGTTCTGGTCTGTCGTCATGCTGAGAGTTCAACAGAGTCGAAGCTTGCAAAAAGTGTTGTAGTTAAAGAAGCTGGTGGTGTCGGGATGGTTCTTATCGATGAGGCAGATATGGATGTTGCCGTCCCATTTGTTATCCCTTCAGCAATCATTAGACGGAGGATAGGAAAACATCTTCTATCTTACATTAATCGCACACGCCAACCAATGTCGAGAATTCTCCCTGCAAAGACTACACTGGGATTGAAACCTGCACCTCATGTTACAGCATTTTCTGCAAAAGGTCCCAATGCTTTGACCCCAGAAATTTTGAAGCCTGATATCACAGCTCCTGGACTGAACATTCTTGCATCTTGGTCTCCAGCAGTAGCTGGTAAGCAGTTCAACATTTTTTCTGGTACATCCATGGCTTGCCCGCATGTAACAGGAATTGCCGCCTTGATAAAAGCCGTTCATCCTTCATGGTCCCCAGCAGCTATTAGATCGGCAATCATGACTACTGCTACTCTTCTGGACAAGAAGCACAAGCCAATTACAGTGGACCCTGAAGGCAAAAAGGGTAATGCATTTGATTATGGCTCAGGCTTCCTGAACCCAACAAGAGCACTTGATCCAGGTCTTATCTTTGACGCACAGCCAGCAGATTATGTATCATTCCTTTGTTCAGTTGGATATGATGAGAAGTCATTGCATCAAATCACACTAGACAACAGTACATGTGCTCAGTCATTCAGAACAGCATCTGACCTTAACTATCCATCTATCACTGTACCAAATCTCGAAGGGAACATCTCAGTAACTAGAACAGTGACCAACGTCGGGAAGCCAAAGAATATCTATAAAGCTGCTGTGTCCTCACCCAAAGGAATCAATGTTACTGTTATCCCAAATCGACTAGTCTTCACCAGCCTCGGTCAGAAGCTAAGCTTTACTGTGAATTTCAAGGTGGTTGCTCCATCGAAGGGATATACATTTGGGTTCTTGTCATGGATGAGTGGAAGATCGAGGGTTACCAGTCCTCTCGTTGTCCAAGTTGCGCATTCAAACTCAGGGCTGATGAGATAA

Protein Analysis

763

Amino Acids

81.54

Weight (kDa)

8.97

Isoelectric Point (pI)

38.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 33 - 113 2.6e-19 Peptidase inhibitor I9
Peptidase_S8 PF00082 141 - 601 4e-47 Subtilase family
fn3_6 PF17766 658 - 752 2.3e-30 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011198)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66720 AT5G66720
fragaria_vesca FvH4_1g13720 FvH4_1g13720
malus_domestica MD02G1151900.v1.1 MD15G1266300.v1.1
prunus_persica Prupe.7G151100_v2.0.a1
pyrus_communis pycom02g11930 pycom15g23180
rosa_chinensis RchiOBHm_Chr2g0102131
rosa_laevigata RLG00000017132
rosa_multiflora Rmu_co8315037.1_g000001 Rmu_sc0000157.1_g000039
rosa_roxburghii Rroxscaffold_2G00140760
rosa_rugosa Rorug02G0104600
rosa_samantha Rh2AG153000 Rh2BG158900 Rh2CG158200 Rh2DG158600
rosa_wichuraiana Rw2G011940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 714
Acc16I TGCGCA 1 cut(s) 2265
Acc36I ACCTGC 1 cut(s) 1486
AccI GTMKAC 2 cut(s) 771, 807
AciI CCGC 4 cut(s) 617, 1140, 1643, 1662
AclWI GGATC 1 cut(s) 1832
AcsI RAATTY 6 cut(s) 282, 450, 945, 1443, 1533, 2164
AcuI CTGAAG 3 cut(s) 1167, 1353, 1794
AfaI GTAC 4 cut(s) 1163, 1627, 1942, 1998
AfiI CCNNNNNNNGG 3 cut(s) 1158, 2046, 2189
AflIII ACRYGT 1 cut(s) 1943
AhlI ACTAGT 1 cut(s) 2122
AjnI CCWGG 4 cut(s) 254, 295, 1558, 1840
Alw21I GWGCWC 3 cut(s) 751, 1834, 1951
Alw26I GTCTC 4 cut(s) 864, 870, 885, 1590
Alw44I GTGCAC 1 cut(s) 747
AlwI GGATC 1 cut(s) 1832
AlwNI CAGNNNCTG 3 cut(s) 1559, 1598, 1970
Ama87I CYCGRG 2 cut(s) 869, 982
AoxI GGCC 3 cut(s) 455, 872, 1218
ApaLI GTGCAC 1 cut(s) 747
ApeKI GCWGC 8 cut(s) 251, 663, 683, 818, 932, 1025, 1700, 2072
ApoI RAATTY 6 cut(s) 282, 450, 945, 1443, 1533, 2164
AseI ATTAAT 1 cut(s) 1416
AspLEI GCGC 2 cut(s) 154, 2266
AspS9I GGNCC 4 cut(s) 872, 1511, 1692, 1768
AsuC2I CCSGG 2 cut(s) 983, 984
AsuHPI GGTGA 5 cut(s) 140, 386, 1103, 2076, 2122
AvaI CYCGRG 2 cut(s) 869, 982
AvaII GGWCC 3 cut(s) 1511, 1692, 1768
AxyI CCTNAGG 1 cut(s) 885
BaeGI GKGCMC 1 cut(s) 751
BbsI GAAGAC 3 cut(s) 29, 138, 2119
Bbv12I GWGCWC 3 cut(s) 751, 1834, 1951
BbvCI CCTCAGC 1 cut(s) 1123
BbvI GCAGC 8 cut(s) 238, 670, 675, 830, 919, 1012, 1712, 2059
BccI CCATC 6 cut(s) 168, 501, 836, 1309, 1993, 2191
BceAI ACGGC 2 cut(s) 1334, 1661
BciT130I CCWGG 4 cut(s) 256, 297, 1560, 1842
BclI TGATCA 1 cut(s) 265
BcnI CCSGG 2 cut(s) 983, 984
BcoDI GTCTC 4 cut(s) 864, 870, 885, 1590
BcuI ACTAGT 1 cut(s) 2122
BfaI CTAG 9 cut(s) 504, 576, 738, 759, 815, 936, 1931, 2028, 2123
BfmI CTRYAG 1 cut(s) 678
BfuAI ACCTGC 1 cut(s) 1486
BisI GCNGC 9 cut(s) 252, 664, 684, 819, 933, 1026, 1662, 1701, 2073
BlpI GCTNAGC 1 cut(s) 2150
BlsI GCNGC 9 cut(s) 253, 665, 685, 820, 934, 1027, 1663, 1702, 2074
Bme1390I CCNGG 6 cut(s) 256, 297, 983, 984, 1560, 1842
Bme18I GGWCC 3 cut(s) 1511, 1692, 1768
BmeT110I CYCGRG 2 cut(s) 869, 982
BmgT120I GGNCC 4 cut(s) 872, 1511, 1692, 1768
BmiI GGNNCC 3 cut(s) 1513, 1694, 1770
BmrFI CCNGG 6 cut(s) 256, 297, 983, 984, 1560, 1842
BmrI ACTGGG 1 cut(s) 1475
BmuI ACTGGG 1 cut(s) 1475
BoxI GACNNNNGTC 1 cut(s) 2042
BpiI GAAGAC 3 cut(s) 29, 138, 2119
BpmI CTGGAG 4 cut(s) 318, 477, 750, 1572
Bpu10I CCTNAGC 2 cut(s) 1123, 1807
Bpu1102I GCTNAGC 1 cut(s) 2150
BpuEI CTTGAG 1 cut(s) 189
BpuMI CCSGG 2 cut(s) 983, 984
Bsa29I ATCGAT 1 cut(s) 1326
BsaBI GATNNNNATC 1 cut(s) 724
BsaI GGTCTC 1 cut(s) 1590
BsaJI CCNNGG 9 cut(s) 93, 384, 603, 641, 982, 1007, 1215, 1632, 2137
BsaWI WCCGGW 1 cut(s) 590
Bsc4I CCNNNNNNNGG 3 cut(s) 1158, 2046, 2189
Bse118I RCCGGY 1 cut(s) 653
Bse1I ACTGG 6 cut(s) 451, 494, 796, 1182, 1470, 2241
Bse21I CCTNAGG 1 cut(s) 885
Bse3DI GCAATG 1 cut(s) 1913
Bse8I GATNNNNATC 1 cut(s) 724
BseBI CCWGG 4 cut(s) 256, 297, 1560, 1842
BseCI ATCGAT 1 cut(s) 1326
BseDI CCNNGG 9 cut(s) 93, 384, 603, 641, 982, 1007, 1215, 1632, 2137
BseGI GGATG 7 cut(s) 89, 1017, 1320, 1348, 1628, 1681, 2223
BseJI GATNNNNATC 1 cut(s) 724
BseLI CCNNNNNNNGG 3 cut(s) 1158, 2046, 2189
BseMI GCAATG 1 cut(s) 1913
BseMII CTCAG 9 cut(s) 83, 899, 1114, 1137, 1242, 1821, 1964, 2034, 2289
BseNI ACTGG 6 cut(s) 451, 494, 796, 1182, 1470, 2241
BseRI GAGGAG 3 cut(s) 747, 756, 873
BseSI GKGCMC 1 cut(s) 751
BseXI GCAGC 8 cut(s) 238, 670, 675, 830, 919, 1012, 1712, 2059
BseYI CCCAGC 1 cut(s) 1696
BsgI GTGCAG 1 cut(s) 1464
BshFI GGCC 3 cut(s) 457, 874, 1220
BshVI ATCGAT 1 cut(s) 1326
BsiHKAI GWGCWC 3 cut(s) 751, 1834, 1951
BsiHKCI CYCGRG 2 cut(s) 869, 982
BsiSI CCGG 4 cut(s) 396, 591, 654, 983
BslFI GGGAC 5 cut(s) 659, 800, 1337, 1497, 1678
BslI CCNNNNNNNGG 3 cut(s) 1158, 2046, 2189
BsmAI GTCTC 4 cut(s) 864, 870, 885, 1590
BsmFI GGGAC 5 cut(s) 659, 800, 1337, 1497, 1678
BsmI GAATGC 3 cut(s) 536, 629, 2266
BsnI GGCC 3 cut(s) 457, 874, 1220
Bso31I GGTCTC 1 cut(s) 1590
BsoBI CYCGRG 2 cut(s) 869, 982
Bsp1286I GDGCHC 3 cut(s) 751, 1834, 1951
Bsp143I GATC 4 cut(s) 265, 1709, 1837, 2228
Bsp1720I GCTNAGC 1 cut(s) 2150
Bsp19I CCATGG 2 cut(s) 1007, 1632
BspACI CCGC 4 cut(s) 617, 1140, 1643, 1662
BspANI GGCC 3 cut(s) 457, 874, 1220
BspCNI CTCAG 9 cut(s) 82, 898, 1113, 1136, 1243, 1820, 1963, 2033, 2288
BspDI ATCGAT 1 cut(s) 1326
BspHI TCATGA 1 cut(s) 1719
BspLI GGNNCC 3 cut(s) 1513, 1694, 1770
BspMI ACCTGC 1 cut(s) 1486
BspPI GGATC 1 cut(s) 1832
BspTNI GGTCTC 1 cut(s) 1590
BsrDI GCAATG 1 cut(s) 1913
BsrFI RCCGGY 1 cut(s) 653
BsrI ACTGG 6 cut(s) 451, 494, 796, 1182, 1470, 2241
BssAI RCCGGY 1 cut(s) 653
BssECI CCNNGG 9 cut(s) 93, 384, 603, 641, 982, 1007, 1215, 1632, 2137
BssMI GATC 4 cut(s) 265, 1709, 1837, 2228
BssNAI GTATAC 1 cut(s) 772
BssT1I CCWWGG 6 cut(s) 93, 384, 641, 1007, 1215, 1632
Bst1107I GTATAC 1 cut(s) 772
Bst2UI CCWGG 4 cut(s) 256, 297, 1560, 1842
Bst4CI ACNGT 9 cut(s) 625, 650, 1021, 1765, 1940, 1996, 2035, 2107, 2161
Bst6I CTCTTC 1 cut(s) 1740
BstAPI GCANNNNNTGC 2 cut(s) 542, 1502
BstC8I GCNNGC 7 cut(s) 273, 501, 1129, 1275, 1639, 1643, 1866
BstDSI CCRYGG 2 cut(s) 1007, 1632
BstEII GGTNACC 1 cut(s) 2236
BstF5I GGATG 7 cut(s) 89, 1017, 1320, 1348, 1628, 1681, 2223
BstHHI GCGC 2 cut(s) 154, 2266
BstKTI GATC 4 cut(s) 268, 1712, 1840, 2231
BstMAI GTCTC 4 cut(s) 864, 870, 885, 1590
BstMBI GATC 4 cut(s) 265, 1709, 1837, 2228
BstMWI GCNNNNNNNGC 8 cut(s) 496, 542, 680, 755, 764, 1148, 1502, 1865
BstNI CCWGG 4 cut(s) 256, 297, 1560, 1842
BstNSI RCATGY 2 cut(s) 1649, 1947
BstPAI GACNNNNGTC 1 cut(s) 2042
BstPI GGTNACC 1 cut(s) 2236
BstSCI CCNGG 6 cut(s) 254, 295, 981, 982, 1558, 1840
BstSFI CTRYAG 1 cut(s) 678
BstSLI GKGCMC 1 cut(s) 751
BstV1I GCAGC 8 cut(s) 238, 670, 675, 830, 919, 1012, 1712, 2059
BstV2I GAAGAC 3 cut(s) 29, 138, 2119
BstXI CCANNNNNNTGG 2 cut(s) 507, 916
BstZ17I GTATAC 1 cut(s) 772
Bsu15I ATCGAT 1 cut(s) 1326
Bsu36I CCTNAGG 1 cut(s) 885
BsuRI GGCC 3 cut(s) 457, 874, 1220
BsuTUI ATCGAT 1 cut(s) 1326
BtgI CCRYGG 2 cut(s) 1007, 1632
BtsCI GGATG 7 cut(s) 89, 1017, 1320, 1348, 1628, 1681, 2223
BtsIMutI CAGTG 9 cut(s) 501, 630, 655, 789, 1108, 1463, 1770, 1992, 2040
BveI ACCTGC 1 cut(s) 1486
Cac8I GCNNGC 7 cut(s) 273, 501, 1129, 1275, 1639, 1643, 1866
CaiI CAGNNNCTG 3 cut(s) 1559, 1598, 1970
CciI TCATGA 1 cut(s) 1719
CfoI GCGC 2 cut(s) 154, 2266
Cfr10I RCCGGY 1 cut(s) 653
Cfr13I GGNCC 4 cut(s) 872, 1511, 1692, 1768
Cfr9I CCCGGG 1 cut(s) 982
ClaI ATCGAT 1 cut(s) 1326
CseI GACGC 1 cut(s) 1865
Csp6I GTAC 4 cut(s) 1162, 1626, 1941, 1997
CspCI CAANNNNNGTGG 2 cut(s) 1746, 1781
CviQI GTAC 4 cut(s) 1162, 1626, 1941, 1997
DpnI GATC 4 cut(s) 267, 1711, 1839, 2230
DpnII GATC 4 cut(s) 265, 1709, 1837, 2228
DraI TTTAAA 1 cut(s) 241
Eam1104I CTCTTC 1 cut(s) 1740
EarI CTCTTC 1 cut(s) 1740
EciI GGCGGA 1 cut(s) 1129
Eco130I CCWWGG 6 cut(s) 93, 384, 641, 1007, 1215, 1632
Eco31I GGTCTC 1 cut(s) 1590
Eco32I GATATC 2 cut(s) 1060, 1549
Eco47I GGWCC 3 cut(s) 1511, 1692, 1768
Eco57I CTGAAG 3 cut(s) 1167, 1353, 1794
Eco81I CCTNAGG 1 cut(s) 885
Eco88I CYCGRG 2 cut(s) 869, 982
Eco91I GGTNACC 1 cut(s) 2236
EcoO109I RGGNCCY 1 cut(s) 1511
EcoO65I GGTNACC 1 cut(s) 2236
EcoRI GAATTC 1 cut(s) 1443
EcoRII CCWGG 4 cut(s) 254, 295, 1558, 1840
EcoRV GATATC 2 cut(s) 1060, 1549
EcoT14I CCWWGG 6 cut(s) 93, 384, 641, 1007, 1215, 1632
EcoT22I ATGCAT 1 cut(s) 1795
ErhI CCWWGG 6 cut(s) 93, 384, 641, 1007, 1215, 1632
FalI AAGNNNNNCTT 2 cut(s) 2138, 2170
FaqI GGGAC 5 cut(s) 659, 800, 1337, 1497, 1678
FauI CCCGC 1 cut(s) 1650
FbaI TGATCA 1 cut(s) 265
FblI GTMKAC 2 cut(s) 771, 807
Fnu4HI GCNGC 9 cut(s) 252, 664, 684, 819, 933, 1026, 1662, 1701, 2073
FokI GGATG 7 cut(s) 76, 1024, 1327, 1355, 1615, 1668, 2230
Fsp4HI GCNGC 9 cut(s) 252, 664, 684, 819, 933, 1026, 1662, 1701, 2073
FspBI CTAG 9 cut(s) 504, 576, 738, 759, 815, 936, 1931, 2028, 2123
FspI TGCGCA 1 cut(s) 2265
GlaI GCGC 2 cut(s) 153, 2265
GluI GCNGC 9 cut(s) 252, 664, 684, 819, 933, 1026, 1662, 1701, 2073
GsaI CCCAGC 1 cut(s) 1700
GsuI CTGGAG 4 cut(s) 318, 477, 750, 1572
HaeIII GGCC 3 cut(s) 457, 874, 1220
HapII CCGG 4 cut(s) 396, 591, 654, 983
HgaI GACGC 1 cut(s) 1865
HhaI GCGC 2 cut(s) 154, 2266
Hin6I GCGC 2 cut(s) 152, 2264
HinP1I GCGC 2 cut(s) 152, 2264
HincII GTYRAC 1 cut(s) 261
HindII GTYRAC 1 cut(s) 261
HindIII AAGCTT 3 cut(s) 273, 1271, 2152
HinfI GANTC 6 cut(s) 145, 412, 461, 611, 1265, 2094
HpaII CCGG 4 cut(s) 396, 591, 654, 983
HphI GGTGA 5 cut(s) 140, 386, 1103, 2076, 2122
Hpy166II GTNNAC 8 cut(s) 181, 261, 377, 749, 772, 808, 850, 1768
Hpy188I TCNGA 6 cut(s) 72, 1057, 1147, 1961, 1972, 2145
Hpy8I GTNNAC 8 cut(s) 181, 261, 377, 749, 772, 808, 850, 1768
Hpy99I CGWCG 1 cut(s) 2048
HpyAV CCTTC 8 cut(s) 505, 968, 1222, 1377, 1695, 1769, 2003, 2182
HpyCH4III ACNGT 9 cut(s) 625, 650, 1021, 1765, 1940, 1996, 2035, 2107, 2161
HpyCH4IV ACGT 2 cut(s) 804, 2043
HpyF10VI GCNNNNNNNGC 8 cut(s) 496, 542, 680, 755, 764, 1148, 1502, 1865
HpySE526I ACGT 2 cut(s) 804, 2043
HspAI GCGC 2 cut(s) 152, 2264
Ksp22I TGATCA 1 cut(s) 265
Kzo9I GATC 4 cut(s) 265, 1709, 1837, 2228
LmnI GCTCC 4 cut(s) 734, 886, 1561, 2185
Lsp1109I GCAGC 8 cut(s) 238, 670, 675, 830, 919, 1012, 1712, 2059
MaeI CTAG 9 cut(s) 504, 576, 738, 759, 815, 936, 1931, 2028, 2123
MaeII ACGT 2 cut(s) 804, 2043
MaeIII GTNAC 9 cut(s) 224, 991, 1084, 1489, 1648, 2023, 2035, 2101, 2236
MalI GATC 4 cut(s) 267, 1711, 1839, 2230
MboI GATC 4 cut(s) 265, 1709, 1837, 2228
MboII GAAGA 8 cut(s) 29, 39, 143, 620, 1394, 1727, 2119, 2238
MhlI GDGCHC 3 cut(s) 751, 1834, 1951
MluCI AATT 9 cut(s) 282, 450, 834, 945, 1443, 1533, 1656, 1758, 2164
MlyI GAGTC 1 cut(s) 1274
MmeI TCCRAC 1 cut(s) 1876
Mph1103I ATGCAT 1 cut(s) 1795
MseI TTAA 7 cut(s) 240, 402, 474, 1080, 1293, 1416, 1977
MslI CAYNNNNRTG 1 cut(s) 914
MspA1I CMGCKG 1 cut(s) 617
MspI CCGG 4 cut(s) 396, 591, 654, 983
MspR9I CCNGG 6 cut(s) 256, 297, 983, 984, 1560, 1842
Mva1269I GAATGC 3 cut(s) 536, 629, 2266
MvaI CCWGG 4 cut(s) 256, 297, 1560, 1842
MwoI GCNNNNNNNGC 8 cut(s) 496, 542, 680, 755, 764, 1148, 1502, 1865
NciI CCSGG 2 cut(s) 983, 984
NcoI CCATGG 2 cut(s) 1007, 1632
NdeII GATC 4 cut(s) 265, 1709, 1837, 2228
NlaIV GGNNCC 3 cut(s) 1513, 1694, 1770
NmeAIII GCCGAG 1 cut(s) 628
NmuCI GTSAC 2 cut(s) 1084, 2035
NsbI TGCGCA 1 cut(s) 2265
NsiI ATGCAT 1 cut(s) 1795
NspI RCATGY 2 cut(s) 1649, 1947
PagI TCATGA 1 cut(s) 1719
PciI ACATGT 1 cut(s) 1943
PctI GAATGC 3 cut(s) 536, 629, 2266
PfeI GAWTC 5 cut(s) 145, 412, 461, 611, 2094
PfoI TCCNGGA 1 cut(s) 1558
PkrI GCNGC 9 cut(s) 253, 665, 685, 820, 934, 1027, 1663, 1702, 2074
PleI GAGTC 1 cut(s) 1273
PpsI GAGTC 1 cut(s) 1273
PpuMI RGGWCCY 1 cut(s) 1511
PscI ACATGT 1 cut(s) 1943
PshAI GACNNNNGTC 1 cut(s) 2042
PshBI ATTAAT 1 cut(s) 1416
PsiI TTATAA 1 cut(s) 714
Psp5II RGGWCCY 1 cut(s) 1511
Psp6I CCWGG 4 cut(s) 254, 295, 1558, 1840
PspEI GGTNACC 1 cut(s) 2236
PspFI CCCAGC 1 cut(s) 1696
PspGI CCWGG 4 cut(s) 254, 295, 1558, 1840
PspN4I GGNNCC 3 cut(s) 1513, 1694, 1770
PspPI GGNCC 4 cut(s) 872, 1511, 1692, 1768
PspPPI RGGWCCY 1 cut(s) 1511
PstNI CAGNNNCTG 3 cut(s) 1559, 1598, 1970
RsaI GTAC 4 cut(s) 1163, 1627, 1942, 1998
RsaNI GTAC 4 cut(s) 1162, 1626, 1941, 1997
RseI CAYNNNNRTG 1 cut(s) 914
SaqAI TTAA 7 cut(s) 240, 402, 474, 1080, 1293, 1416, 1977
SatI GCNGC 9 cut(s) 252, 664, 684, 819, 933, 1026, 1662, 1701, 2073
Sau3AI GATC 4 cut(s) 265, 1709, 1837, 2228
Sau96I GGNCC 4 cut(s) 872, 1511, 1692, 1768
SchI GAGTC 1 cut(s) 1274
ScrFI CCNGG 6 cut(s) 256, 297, 983, 984, 1560, 1842
SduI GDGCHC 3 cut(s) 751, 1834, 1951
SfcI CTRYAG 1 cut(s) 678
SinI GGWCC 3 cut(s) 1511, 1692, 1768
SmaI CCCGGG 1 cut(s) 984
SmiMI CAYNNNNRTG 1 cut(s) 914
SmlI CTYRAG 1 cut(s) 204
SmoI CTYRAG 1 cut(s) 204
SpeI ACTAGT 1 cut(s) 2122
Sse9I AATT 9 cut(s) 282, 450, 834, 945, 1443, 1533, 1656, 1758, 2164
SsiI CCGC 4 cut(s) 617, 1140, 1643, 1662
SspMI CTAG 9 cut(s) 504, 576, 738, 759, 815, 936, 1931, 2028, 2123
StyD4I CCNGG 6 cut(s) 254, 295, 981, 982, 1558, 1840
StyI CCWWGG 6 cut(s) 93, 384, 641, 1007, 1215, 1632
TaaI ACNGT 9 cut(s) 625, 650, 1021, 1765, 1940, 1996, 2035, 2107, 2161
TaiI ACGT 2 cut(s) 807, 2046
TaqI TCGA 8 cut(s) 323, 1268, 1326, 1439, 2007, 2119, 2186, 2231
TaqII GACCGA 1 cut(s) 2129
TasI AATT 9 cut(s) 282, 450, 834, 945, 1443, 1533, 1656, 1758, 2164
TatI WGTACW 1 cut(s) 1940
TauI GCSGC 1 cut(s) 1664
TfiI GAWTC 5 cut(s) 145, 412, 461, 611, 2094
Tru1I TTAA 7 cut(s) 240, 402, 474, 1080, 1293, 1416, 1977
Tru9I TTAA 7 cut(s) 240, 402, 474, 1080, 1293, 1416, 1977
TscAI CASTG 9 cut(s) 501, 630, 655, 796, 1108, 1470, 1770, 1999, 2040
TseFI GTSAC 2 cut(s) 1084, 2035
TseI GCWGC 8 cut(s) 251, 663, 683, 818, 932, 1025, 1700, 2072
Tsp45I GTSAC 2 cut(s) 1084, 2035
TspGWI ACGGA 2 cut(s) 1052, 1399
TspMI CCCGGG 1 cut(s) 982
TspRI CASTG 9 cut(s) 501, 630, 655, 796, 1108, 1470, 1770, 1999, 2040
VneI GTGCAC 1 cut(s) 747
VpaK11BI GGWCC 3 cut(s) 1511, 1692, 1768
VspI ATTAAT 1 cut(s) 1416
XapI RAATTY 6 cut(s) 282, 450, 945, 1443, 1533, 2164
XceI RCATGY 2 cut(s) 1649, 1947
XcmI CCANNNNNNNNNTGG 1 cut(s) 100
XmaI CCCGGG 1 cut(s) 982
XmiI GTMKAC 2 cut(s) 771, 807
XspI CTAG 9 cut(s) 504, 576, 738, 759, 815, 936, 1931, 2028, 2123
Zsp2I ATGCAT 1 cut(s) 1795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.