FvH4_1g14410

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0017221
Physical Location & Seq
Reverse (-)
8044304 .. 8046433
2130 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g14410.t1

Sequence Viewer

Length: 1968 bp
ATGTACTTCCCCCTCAAGCATCCAACCGTTATTTCCCGCCTCTTTCCCTCTCACTCTTTCCACACCCACAATTTCAAGACCCCAATTCACCAAACCCTTCACCACCTCCTAGAGCAATGCTCCTCCATGACCCACCTCAAACAGCTCCACGCCCAAATCATCCTCCACCGCCTCACCTCCGAAAACCTCACCGTCGGAAAGCTCATCTCCTTCTGCTCCGTCTCCGCCGCCGGAGACCTCCGTTACGCTCAGCTCGTGTTCGACCAAGTCCACGAACCCAACAAATATATGTACAATAGTCTCATTAGAGGTTACTCAAATAGCAATGACACATTCAAAGCTATGTCATTGTATTACCATATGATAAATTCCGGGCTTTCGCCTAACGAGTTTACGCTGCCCTTTGTTCTTAAGGTTTGCGCAGCGAAAACGGCGTATTGGGAAGGCGTGGCGGTTCAATGCCAGGCTGTTAAGCTCGGAATTGGGTGTCAAGTTTGTGTGCAAAATGGGCTGATCAATGTGTATAGTGTTTGTGGGTTGGTGCATTGTGCTCGGAATGTGTTTGATGAAATGTCTGAGAGGAGTTTGGTGTCGTGGAATTCGATGATCGGTGGGTATTCCGGAGTTGGTTGTTGGAAGGAAGCTTTCGGGTTGTTTAGGGAGATGAGAGGTTTCGGCGTTGAGCCTGATAAGTATACATTGGTTAACTTGCTTTCGGTTTGTTCACAGAGTTGTGATTTGGATTTGGGGAGATATTTGCATCATTTTGTGGTGGTTAGTGGGATGGTGGTAGATCATATTTTGAGAAATGCTTTGCTTGATATGTATGGGAAGTGTGGGCATTTGGCTTCAGCTGAGATGGTTTTCAATCAAATGGGTTGCAAAAATGTGGTTTCTTGGACGTCGATGGTTAGGGCGTATGCTAAACATGGGTGCATTGATGTTGCGGGGAAGTTTTTCGATCAGATGCCGCTGAAAAATGTTGTTTCTTGGAATTCGCTGATTTCTTGTTATGTTCGAGAAGGCCAGTGCAGGGAAGCTCTGGATCTCTTCCAGAAAATGCTCGATTCTGGCGTGGCGCCTGATGAGGCTACCCTGGTTTTCATTCTCTCAGCCTGTAGTCAAGTAGGTGATTTGGTCATTGGAAAGGAAGCCCATGATCACATAAGCAAGAGCAATATAGCACTCACTGTAACTCTTTATAACTCCCTTATAGACATGTATGCAAAATGTGGTGCTGTTCGAACTGCCATGGATATCTTTACTCAGATACCAGAAAAGAATTTAGTATCATGGAACATTATTATCAGCGCCCTTGCGTTGCACGGTTATGGATCAGAAGCAATTAGGATATTCGAGCAGATGCAAGAAGGTGGAATCTGGCCGGATGAGATCACCTTCATTGGATTGCTTTCTGCTTGTAGTCACAGTGGTCTTCTTGACTTGGGGAGATTTTTCTTTGAAAGAATGAAGTCTGTTTACAGAATTTCTCCTGAAATTGAGCACTATGCTTGCTTGGTTGATCTGCTGGGAAGACGTGGGTGCTTAGAAGAAGCAATTACGCTGATGAGAGGAATGCCAATGAAGCCTGATATTGTTGTTTGGGGTGCTATGCTTGGTGCTTGTCGCATCCACGGCAATGTAGATTTAGCCAAGCTAATTTTGAAACAGCTGTTGGAGTTGGAGCTACATGGTTCTGGGCTTTACGTGCTTCTTGCAAACATATTTGGAGAAGCTCACAGATGGGAAGATGTCAAGAATATCAGGAAACTAATAAAAGACGGTGGAGTCATAAAGAATAGAGCTGTGAGCTCCATTGAAATTGATGGTTGTGTTTATGAGTTTATGGTTGATGACAATAGACATGCACTTTCAAGCAGTATATACTCCATACTCGATCAATTGACTGATCATTTGAAGTCTCTTAGGTACAATCCTACTGCATTGTTTGATATAGAGGAACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

656

Amino Acids

73.38

Weight (kDa)

6.47

Isoelectric Point (pI)

36.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 93 - 141 8.2e-08 PPR repeat family
PPR_2 PF13041 195 - 241 1.1e-10 PPR repeat family
PPR PF01535 197 - 227 2.7e-08 PPR repeat
PPR_2 PF13041 326 - 374 3.9e-13 PPR repeat family
PPR PF01535 329 - 359 4.8e-10 PPR repeat
PPR_2 PF13041 428 - 475 6e-10 PPR repeat family
PPR PF01535 430 - 460 2.5e-06 PPR repeat
E_motif PF20431 545 - 607 1.4e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017221)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14410
malus_domestica MD02G1157600.v1.1
prunus_persica Prupe.7G146100_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0103131
rosa_laevigata RLG00000017212
rosa_multiflora Rmu_sc0000388.1_g000006
rosa_roxburghii Rroxscaffold_2G00139900
rosa_rugosa Rorug02G0112000
rosa_samantha Rh2AG160800 Rh2BG167500 Rh2CG167800 Rh2DG166400
rosa_wichuraiana Rw2G012590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1203
AasI GACNNNNNNGTC 1 cut(s) 1787
AatII GACGTC 1 cut(s) 905
Acc16I TGCGCA 1 cut(s) 421
AccB1I GGYRCC 1 cut(s) 1078
AccI GTMKAC 1 cut(s) 695
AccIII TCCGGA 1 cut(s) 620
AciI CCGC 7 cut(s) 37, 169, 225, 228, 452, 947, 971
AclWI GGATC 2 cut(s) 1053, 1342
AcoI YGGCCR 1 cut(s) 1382
AcsI RAATTY 5 cut(s) 367, 598, 994, 1282, 1485
AcuI CTGAAG 1 cut(s) 834
AcyI GRCGYC 2 cut(s) 902, 1079
AfaI GTAC 3 cut(s) 5, 293, 1931
AfiI CCNNNNNNNGG 1 cut(s) 1033
AflII CTTAAG 1 cut(s) 410
AflIII ACRYGT 1 cut(s) 1218
AgsI TTSAA 9 cut(s) 76, 337, 458, 868, 1463, 1666, 1820, 1875, 1918
AjiI CACGTC 1 cut(s) 1538
AjnI CCWGG 2 cut(s) 462, 1095
AjuI GAANNNNNNNTTGG 4 cut(s) 16, 48, 1658, 1690
Alw21I GWGCWC 3 cut(s) 553, 1506, 1814
Alw26I GTCTC 4 cut(s) 226, 228, 305, 1926
AlwI GGATC 2 cut(s) 1053, 1342
Aor13HI TCCGGA 1 cut(s) 620
AoxI GGCC 2 cut(s) 1024, 1382
ApeKI GCWGC 2 cut(s) 397, 422
ApoI RAATTY 5 cut(s) 367, 598, 994, 1282, 1485
ArsI GACNNNNNNTTYG 2 cut(s) 1897, 1929
Asp700I GAANNNNTTC 1 cut(s) 956
AspLEI GCGC 3 cut(s) 422, 1081, 1313
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 6 cut(s) 80, 92, 166, 181, 1142, 1387
AsuII TTCGAA 1 cut(s) 1243
BanI GGYRCC 1 cut(s) 1078
BanII GRGCYC 1 cut(s) 1814
BarI GAAGNNNNNNTAC 2 cut(s) 1463, 1495
BauI CACGAG 1 cut(s) 254
BbsI GAAGAC 2 cut(s) 1427, 1540
Bbv12I GWGCWC 3 cut(s) 553, 1506, 1814
BbvI GCAGC 2 cut(s) 384, 434
BccI CCATC 5 cut(s) 778, 853, 901, 1737, 1820
BceAI ACGGC 2 cut(s) 447, 1651
BcgI CGANNNNNNTGC 2 cut(s) 533, 567
BciT130I CCWGG 2 cut(s) 464, 1097
BclI TGATCA 3 cut(s) 513, 1159, 1909
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 4 cut(s) 226, 228, 305, 1926
BfaI CTAG 1 cut(s) 110
BfmI CTRYAG 2 cut(s) 1117, 1964
BfoI RGCGCY 2 cut(s) 1082, 1314
BfrI CTTAAG 1 cut(s) 410
BisI GCNGC 4 cut(s) 228, 398, 423, 971
BlpI GCTNAGC 1 cut(s) 249
BlsI GCNGC 4 cut(s) 229, 399, 424, 972
Bme1390I CCNGG 3 cut(s) 373, 464, 1097
BmgBI CACGTC 1 cut(s) 1538
BmiI GGNNCC 1 cut(s) 1080
BmrFI CCNGG 3 cut(s) 373, 464, 1097
BmsI GCATC 5 cut(s) 28, 769, 957, 1353, 1638
BpiI GAAGAC 2 cut(s) 1427, 1540
BplI GAGNNNNNCTC 2 cut(s) 104, 136
Bpu1102I GCTNAGC 1 cut(s) 249
Bpu14I TTCGAA 1 cut(s) 1243
BpuMI CCSGG 1 cut(s) 373
BsaAI YACGTR 1 cut(s) 1708
BsaHI GRCGYC 2 cut(s) 902, 1079
BsaI GGTCTC 1 cut(s) 228
BsaJI CCNNGG 3 cut(s) 1095, 1251, 1633
BsaWI WCCGGW 1 cut(s) 620
Bsc4I CCNNNNNNNGG 1 cut(s) 1033
Bse1I ACTGG 1 cut(s) 1027
Bse3DI GCAATG 3 cut(s) 122, 331, 1645
BseAI TCCGGA 1 cut(s) 620
BseBI CCWGG 2 cut(s) 464, 1097
BseDI CCNNGG 3 cut(s) 1095, 1251, 1633
BseGI GGATG 5 cut(s) 19, 159, 789, 1393, 1629
BseLI CCNNNNNNNGG 1 cut(s) 1033
BseMI GCAATG 3 cut(s) 122, 331, 1645
BseMII CTCAG 5 cut(s) 263, 567, 846, 1125, 1280
BseNI ACTGG 1 cut(s) 1027
BseRI GAGGAG 2 cut(s) 112, 595
BseXI GCAGC 2 cut(s) 384, 434
BseYI CCCAGC 1 cut(s) 1528
BsgI GTGCAG 1 cut(s) 1051
BshFI GGCC 2 cut(s) 1026, 1384
BshNI GGYRCC 1 cut(s) 1078
BsiHKAI GWGCWC 3 cut(s) 553, 1506, 1814
BsiSI CCGG 4 cut(s) 231, 372, 621, 1385
BslI CCNNNNNNNGG 1 cut(s) 1033
BsmAI GTCTC 4 cut(s) 226, 228, 305, 1926
BsmBI CGTCTC 1 cut(s) 226
BsmI GAATGC 1 cut(s) 1581
BsnI GGCC 2 cut(s) 1026, 1384
Bso31I GGTCTC 1 cut(s) 228
Bsp119I TTCGAA 1 cut(s) 1243
Bsp1286I GDGCHC 3 cut(s) 553, 1506, 1814
Bsp13I TCCGGA 1 cut(s) 620
Bsp1407I TGTACA 1 cut(s) 291
Bsp1720I GCTNAGC 1 cut(s) 249
Bsp19I CCATGG 1 cut(s) 1251
BspACI CCGC 7 cut(s) 37, 169, 225, 228, 452, 947, 971
BspANI GGCC 2 cut(s) 1026, 1384
BspCNI CTCAG 5 cut(s) 262, 568, 847, 1124, 1279
BspEI TCCGGA 1 cut(s) 620
BspLI GGNNCC 1 cut(s) 1080
BspPI GGATC 2 cut(s) 1053, 1342
BspT104I TTCGAA 1 cut(s) 1243
BspT107I GGYRCC 1 cut(s) 1078
BspTI CTTAAG 1 cut(s) 410
BspTNI GGTCTC 1 cut(s) 228
BsrDI GCAATG 3 cut(s) 122, 331, 1645
BsrGI TGTACA 1 cut(s) 291
BsrI ACTGG 1 cut(s) 1027
BssECI CCNNGG 3 cut(s) 1095, 1251, 1633
BssNAI GTATAC 1 cut(s) 696
BssNI GRCGYC 2 cut(s) 902, 1079
BssSI CACGAG 1 cut(s) 254
BssT1I CCWWGG 1 cut(s) 1251
Bst1107I GTATAC 1 cut(s) 696
Bst2BI CACGAG 1 cut(s) 254
Bst2UI CCWGG 2 cut(s) 464, 1097
Bst4CI ACNGT 7 cut(s) 28, 193, 1192, 1328, 1430, 1784, 1965
Bst6I CTCTTC 1 cut(s) 1055
BstACI GRCGYC 2 cut(s) 902, 1079
BstAFI CTTAAG 1 cut(s) 410
BstAUI TGTACA 1 cut(s) 291
BstBAI YACGTR 1 cut(s) 1708
BstBI TTCGAA 1 cut(s) 1243
BstC8I GCNNGC 1 cut(s) 1513
BstDEI CTNAG 7 cut(s) 249, 576, 855, 1111, 1266, 1546, 1925
BstDSI CCRYGG 2 cut(s) 1251, 1633
BstF5I GGATG 5 cut(s) 19, 159, 789, 1393, 1629
BstH2I RGCGCY 2 cut(s) 1082, 1314
BstHHI GCGC 3 cut(s) 422, 1081, 1313
BstMAI GTCTC 4 cut(s) 226, 228, 305, 1926
BstMWI GCNNNNNNNGC 5 cut(s) 431, 508, 1585, 1635, 1708
BstNI CCWGG 2 cut(s) 464, 1097
BstNSI RCATGY 2 cut(s) 1222, 1868
BstSCI CCNGG 3 cut(s) 371, 462, 1095
BstSFI CTRYAG 2 cut(s) 1117, 1964
BstV1I GCAGC 2 cut(s) 384, 434
BstV2I GAAGAC 2 cut(s) 1427, 1540
BstX2I RGATCY 1 cut(s) 1045
BstYI RGATCY 1 cut(s) 1045
BstZ17I GTATAC 1 cut(s) 696
BsuRI GGCC 2 cut(s) 1026, 1384
BtgI CCRYGG 2 cut(s) 1251, 1633
BtrI CACGTC 1 cut(s) 1538
BtsCI GGATG 5 cut(s) 19, 159, 789, 1393, 1629
BtsIMutI CAGTG 3 cut(s) 1034, 1188, 1435
Cac8I GCNNGC 1 cut(s) 1513
CfoI GCGC 3 cut(s) 422, 1081, 1313
Csp6I GTAC 3 cut(s) 4, 292, 1930
CviAII CATG 8 cut(s) 127, 929, 1157, 1219, 1252, 1293, 1691, 1865
CviQI GTAC 3 cut(s) 4, 292, 1930
DdeI CTNAG 7 cut(s) 249, 576, 855, 1111, 1266, 1546, 1925
DinI GGCGCC 1 cut(s) 1080
DrdI GACNNNNNNGTC 1 cut(s) 1787
DseDI GACNNNNNNGTC 1 cut(s) 1787
EaeI YGGCCR 1 cut(s) 1382
Eam1104I CTCTTC 1 cut(s) 1055
EarI CTCTTC 1 cut(s) 1055
EciI GGCGGA 1 cut(s) 214
Ecl136II GAGCTC 1 cut(s) 1812
Eco130I CCWWGG 1 cut(s) 1251
Eco24I GRGCYC 1 cut(s) 1814
Eco31I GGTCTC 1 cut(s) 228
Eco32I GATATC 1 cut(s) 1258
Eco53kI GAGCTC 1 cut(s) 1812
Eco57I CTGAAG 1 cut(s) 834
EcoICRI GAGCTC 1 cut(s) 1812
EcoRI GAATTC 2 cut(s) 598, 994
EcoRII CCWGG 2 cut(s) 462, 1095
EcoRV GATATC 1 cut(s) 1258
EcoT14I CCWWGG 1 cut(s) 1251
EcoT38I GRGCYC 1 cut(s) 1814
EgeI GGCGCC 1 cut(s) 1080
EheI GGCGCC 1 cut(s) 1080
ErhI CCWWGG 1 cut(s) 1251
Esp3I CGTCTC 1 cut(s) 226
FaeI CATG 8 cut(s) 130, 932, 1160, 1222, 1255, 1296, 1694, 1868
FatI CATG 8 cut(s) 126, 928, 1156, 1218, 1251, 1292, 1690, 1864
FauI CCCGC 2 cut(s) 44, 940
FauNDI CATATG 1 cut(s) 360
FbaI TGATCA 3 cut(s) 513, 1159, 1909
FblI GTMKAC 1 cut(s) 695
Fnu4HI GCNGC 4 cut(s) 228, 398, 423, 971
FokI GGATG 5 cut(s) 6, 146, 796, 1400, 1616
FriOI GRGCYC 1 cut(s) 1814
Fsp4HI GCNGC 4 cut(s) 228, 398, 423, 971
FspBI CTAG 1 cut(s) 110
FspI TGCGCA 1 cut(s) 421
GlaI GCGC 3 cut(s) 421, 1080, 1312
GluI GCNGC 4 cut(s) 228, 398, 423, 971
GsaI CCCAGC 1 cut(s) 1532
HaeII RGCGCY 2 cut(s) 1082, 1314
HaeIII GGCC 2 cut(s) 1026, 1384
HapII CCGG 4 cut(s) 231, 372, 621, 1385
HhaI GCGC 3 cut(s) 422, 1081, 1313
Hin1I GRCGYC 2 cut(s) 902, 1079
Hin1II CATG 8 cut(s) 130, 932, 1160, 1222, 1255, 1296, 1694, 1868
Hin6I GCGC 3 cut(s) 420, 1079, 1311
HinP1I GCGC 3 cut(s) 420, 1079, 1311
HincII GTYRAC 1 cut(s) 706
HindII GTYRAC 1 cut(s) 706
HindIII AAGCTT 1 cut(s) 642
HinfI GANTC 3 cut(s) 1067, 1377, 1788
HpaI GTTAAC 1 cut(s) 706
HpaII CCGG 4 cut(s) 231, 372, 621, 1385
HphI GGTGA 6 cut(s) 80, 92, 166, 181, 1142, 1387
Hpy166II GTNNAC 6 cut(s) 271, 393, 696, 706, 725, 1480
Hpy188I TCNGA 8 cut(s) 181, 197, 479, 555, 577, 966, 1269, 1339
Hpy188III TCNNGA 9 cut(s) 76, 621, 1019, 1043, 1054, 1439, 1493, 1756, 1765
Hpy8I GTNNAC 6 cut(s) 271, 393, 696, 706, 725, 1480
Hpy99I CGWCG 2 cut(s) 197, 907
HpyAV CCTTC 7 cut(s) 107, 220, 437, 631, 1016, 1364, 1408
HpyCH4III ACNGT 7 cut(s) 28, 193, 1192, 1328, 1430, 1784, 1965
HpyCH4IV ACGT 3 cut(s) 902, 1537, 1707
HpyF10VI GCNNNNNNNGC 5 cut(s) 431, 508, 1585, 1635, 1708
HpyF3I CTNAG 7 cut(s) 249, 576, 855, 1111, 1266, 1546, 1925
HpySE526I ACGT 3 cut(s) 902, 1537, 1707
Hsp92I GRCGYC 2 cut(s) 902, 1079
Hsp92II CATG 8 cut(s) 130, 932, 1160, 1222, 1255, 1296, 1694, 1868
HspAI GCGC 3 cut(s) 420, 1079, 1311
KasI GGCGCC 1 cut(s) 1078
Kpn2I TCCGGA 1 cut(s) 620
Ksp22I TGATCA 3 cut(s) 513, 1159, 1909
KspAI GTTAAC 1 cut(s) 706
LmnI GCTCC 5 cut(s) 125, 150, 221, 1684, 1817
Lsp1109I GCAGC 2 cut(s) 384, 434
LweI GCATC 5 cut(s) 28, 769, 957, 1353, 1638
MaeI CTAG 1 cut(s) 110
MaeII ACGT 3 cut(s) 902, 1537, 1707
MaeIII GTNAC 4 cut(s) 242, 311, 1192, 1424
MboII GAAGA 5 cut(s) 1042, 1427, 1545, 1562, 1760
MfeI CAATTG 1 cut(s) 1901
MflI RGATCY 1 cut(s) 1045
MhlI GDGCHC 3 cut(s) 553, 1506, 1814
Mly113I GGCGCC 1 cut(s) 1079
MlyI GAGTC 1 cut(s) 1797
MmeI TCCRAC 5 cut(s) 47, 175, 614, 1656, 1662
MroI TCCGGA 1 cut(s) 620
MroXI GAANNNNTTC 1 cut(s) 956
MseI TTAA 3 cut(s) 411, 471, 705
MslI CAYNNNNRTG 2 cut(s) 1329, 1638
MspA1I CMGCKG 3 cut(s) 854, 973, 1672
MspCI CTTAAG 1 cut(s) 410
MspI CCGG 4 cut(s) 231, 372, 621, 1385
MspR9I CCNGG 3 cut(s) 373, 464, 1097
MunI CAATTG 1 cut(s) 1901
Mva1269I GAATGC 1 cut(s) 1581
MvaI CCWGG 2 cut(s) 464, 1097
MwoI GCNNNNNNNGC 5 cut(s) 431, 508, 1585, 1635, 1708
NarI GGCGCC 1 cut(s) 1079
NciI CCSGG 1 cut(s) 373
NcoI CCATGG 1 cut(s) 1251
NdeI CATATG 1 cut(s) 360
NlaIII CATG 8 cut(s) 130, 932, 1160, 1222, 1255, 1296, 1694, 1868
NlaIV GGNNCC 1 cut(s) 1080
NmuCI GTSAC 1 cut(s) 1424
NsbI TGCGCA 1 cut(s) 421
NspI RCATGY 2 cut(s) 1222, 1868
NspV TTCGAA 1 cut(s) 1243
PciI ACATGT 1 cut(s) 1218
PcsI WCGNNNNNNNCGW 3 cut(s) 252, 599, 1071
PctI GAATGC 1 cut(s) 1581
PdmI GAANNNNTTC 1 cut(s) 956
PfeI GAWTC 2 cut(s) 1067, 1377
PflFI GACNNNGTC 1 cut(s) 266
PkrI GCNGC 4 cut(s) 229, 399, 424, 972
PleI GAGTC 1 cut(s) 1796
PluTI GGCGCC 1 cut(s) 1082
PpsI GAGTC 1 cut(s) 1796
Ppu21I YACGTR 1 cut(s) 1708
PscI ACATGT 1 cut(s) 1218
PsiI TTATAA 1 cut(s) 1203
Psp124BI GAGCTC 1 cut(s) 1814
Psp6I CCWGG 2 cut(s) 462, 1095
PspFI CCCAGC 1 cut(s) 1528
PspGI CCWGG 2 cut(s) 462, 1095
PspN4I GGNNCC 1 cut(s) 1080
PsuI RGATCY 1 cut(s) 1045
PsyI GACNNNGTC 1 cut(s) 266
PvuII CAGCTG 2 cut(s) 854, 1672
RsaI GTAC 3 cut(s) 5, 293, 1931
RsaNI GTAC 3 cut(s) 4, 292, 1930
RseI CAYNNNNRTG 2 cut(s) 1329, 1638
SacI GAGCTC 1 cut(s) 1814
SaqAI TTAA 3 cut(s) 411, 471, 705
SatI GCNGC 4 cut(s) 228, 398, 423, 971
SchI GAGTC 1 cut(s) 1797
ScrFI CCNGG 3 cut(s) 373, 464, 1097
SduI GDGCHC 3 cut(s) 553, 1506, 1814
SfaNI GCATC 5 cut(s) 28, 769, 957, 1353, 1638
SfcI CTRYAG 2 cut(s) 1117, 1964
SfoI GGCGCC 1 cut(s) 1080
SfuI TTCGAA 1 cut(s) 1243
SmiMI CAYNNNNRTG 2 cut(s) 1329, 1638
SmlI CTYRAG 2 cut(s) 14, 410
SmoI CTYRAG 2 cut(s) 14, 410
SsiI CCGC 7 cut(s) 37, 169, 225, 228, 452, 947, 971
SspDI GGCGCC 1 cut(s) 1078
SspMI CTAG 1 cut(s) 110
SstI GAGCTC 1 cut(s) 1814
StyD4I CCNGG 3 cut(s) 371, 462, 1095
StyI CCWWGG 1 cut(s) 1251
TaaI ACNGT 7 cut(s) 28, 193, 1192, 1328, 1430, 1784, 1965
TaiI ACGT 3 cut(s) 905, 1540, 1710
TaqI TCGA 9 cut(s) 261, 602, 905, 960, 1018, 1065, 1243, 1356, 1896
TatI WGTACW 2 cut(s) 3, 291
TauI GCSGC 2 cut(s) 230, 973
TfiI GAWTC 2 cut(s) 1067, 1377
Tru1I TTAA 3 cut(s) 411, 471, 705
Tru9I TTAA 3 cut(s) 411, 471, 705
TscAI CASTG 3 cut(s) 1034, 1195, 1435
TseFI GTSAC 1 cut(s) 1424
TseI GCWGC 2 cut(s) 397, 422
Tsp45I GTSAC 1 cut(s) 1424
TspDTI ATGAA 5 cut(s) 582, 1093, 1390, 1484, 1598
TspGWI ACGGA 2 cut(s) 208, 230
TspRI CASTG 3 cut(s) 1034, 1195, 1435
Tth111I GACNNNGTC 1 cut(s) 266
Vha464I CTTAAG 1 cut(s) 410
XapI RAATTY 5 cut(s) 367, 598, 994, 1282, 1485
XceI RCATGY 2 cut(s) 1222, 1868
XmiI GTMKAC 1 cut(s) 695
XmnI GAANNNNTTC 1 cut(s) 956
XspI CTAG 1 cut(s) 110
ZraI GACGTC 1 cut(s) 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.