Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0016202

Physical Location & Seq

Genomic Coordinates Reverse (-)

8520277 .. 8522475

Gene Structure 2199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g15080.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGAAATTGTTGAATGGGAAAATCTCCAAGTCCTTCCCTCCATTAAGCAATAAATCTTTCTTCAAATCAAACACTAAACACGGCCTGATCACCCGTCTATGCAAAGACAGGAAATTCAAAGAAGCCATACGCATTCTCTGTAACCAACACCGCTTACCCGAAGCAGTTCAGTTACTCACCCACATTGTCACACCCTCGTCTTCCCTATACTCCACCCTCATACACCATTGTCTTCAACACCGTGCTCTTGATCAGGCCAAACTTGTCCATTCCCACACAGAACTCTCCGGCTTCGACCCCGGCGTGTTCATTTCCAACCGTTTCATTGACTTGTACGCTAAATGCGGCAGTCTCGTGGATGCCCAGAAAGTGTTTGATGAAATGCCCGAGAGGGATTTGTGTTCTTGGAACACTATGATTTCCGGGTATGCGAAACTGGGGAAGCTTGGTGACGCTAGTAAGCTGTTTGATGAAATGCCTCAGAGAGATAATTTCTCCTGGACGGCGATGATTTCCGGGTACGTGCGGCACAAAAGGCCTGATGAGGCTTTGGAGTTGTATAGGGTGATGCAGAAAGAAGAGAGTTCGAAGTCTAGTAAGTTCACTGTGTCTAGCGTTCTTGCTGCTTCTGCAGCTGTTCAGAGTTTGAGAATGGGGAAGGAGATTCATGGTTATATAATGCGGACTGGGTTGGATTTGGATGAGGTGGTTTGGAGTGCGTTGTCGGATATGTATGGGAAATGTGGGAGTATAGAGGAAGCTAGGCGTGTGTTCGATAAGATGGTGAATCGAGATGTTGTGACATGGACTGCGATGATGGGGAGATACTTTGAGGATGGGAAGAGGGAAGAGGGACTAGCATTGTTTTTGGAGCTGATGAGAACCGGGATTAGGCCTAATGAGTTCAAGTTTGCGGGGGTTTTGAATGCCTGCGCTGATCATGCTATTGAGAATCTGGGGAAGCAGGTACATGGATACATGACACGGATAGGATTTGACCTCTTTTCGTTTGCAGCAAGTGCCCTTGTTCATATGTATTCAAAATGTGGAAACACTGCTCACGCGTATATGGTGTTTAGAGGGATGCCTAGTCCAGATTTGGTTTCGTGGACTTCCCTCATTGTTGGATATGCTCAGAATGGTCAAGCTGACAAAGCTCTTCAGTTGTTTGAGTCACTACTTAAGTCTGGTACTCGGCCTGATCACGTAACATTTGTTGGTGTTCTTTCAGCTTGTACTCTTGATTTGCTAGCCCGAGCTGGCCGGTTTGAAGAAGCCGAGGATATTATAAGTGAAATGCCTATGAAGCCTAGTAAGTTCTTGTGGGCCTCCTTAATTGGGGGTTGCAGAATTCATGGAAACGTGAAGCTGGCAAAGCAAGCTGCAGAGGCTTTGTTTGTGATAGAACCCGAGAATCTTGCTACTTATGTTACTCTGGCCAACATTTACGCTACTGCTGGTATGTGGAGTGAAGTAACAAATGTTAGAAAGAAAATGGATGAAAGTGGGATAACAAAGAAACCAGGTCTGAGTTGGATTGAGATCAAGAGAGAGATGCATGTTTTCATAGTTGGAGATCAGTCTCACCCCAGATACAATGAAATAGATCACTTCTTGAGTGAACTTTCAAAGAGGATGAAAGAAGAAGGGTATGTTCCTGACACAAAGTTTGTGCTACATGATGTTGAGGAGGAGCAGAAAGAGCAGAACCTCTCCTACCACAGCGAGAAGCTTGCAGTTGCATTCGGCATTATTTCTACTCCATCAGGGACTCCAATCAAGAAAGAGAATACTGAAGTTAAGAATCTTTTTCTTTGTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

608

Amino Acids

68.35

Weight (kDa)

8.31

Isoelectric Point (pI)

37.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	131 - 159	1.3e-07	PPR repeat
PPR_2	PF13041	132 - 162	2.8e-07	PPR repeat family
PPR	PF01535	135 - 162	1.5e-08	PPR repeat
PPR_2	PF13041	163 - 207	1.6e-06	PPR repeat family
PPR	PF01535	165 - 193	5.7e-08	PPR repeat
PPR_2	PF13041	264 - 312	4.9e-07	PPR repeat family
PPR_2	PF13041	365 - 412	1.4e-10	PPR repeat family
PPR	PF01535	368 - 397	7.5e-07	PPR repeat
E_motif	PF20431	452 - 514	3.5e-19	E motif
DYW_deaminase	PF14432	550 - 606	3.6e-13	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37170
fragaria_vesca	FvH4_1g15050 FvH4_1g15080
malus_domestica	MD15G1276800.v1.1
prunus_persica	Prupe.7G139900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0104091 RchiOBHm_Chr2g0104101
rosa_laevigata	RLG00000017288 RLG00000017299
rosa_multiflora	Rmu_ssc0000257.1_g000009
rosa_rugosa	Rorug02G0119400
rosa_samantha	Rh2BG176100 Rh2CG174500 Rh2CG174700
rosa_wichuraiana	Rw2G013220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1289
Acc36I	ACCTGC	1 cut(s)	955
AccII	CGCG	1 cut(s)	1064
AciI	CCGC	5 cut(s)	151, 345, 526, 682, 914
AcoI	YGGCCR	2 cut(s)	1261, 1437
AcsI	RAATTY	2 cut(s)	113, 1350
AcuI	CTGAAG	2 cut(s)	1145, 1815
AfaI	GTAC	5 cut(s)	335, 521, 969, 1192, 1237
AfiI	CCNNNNNNNGG	2 cut(s)	891, 1338
AflII	CTTAAG	1 cut(s)	1181
AflIII	ACRYGT	1 cut(s)	1062
AgsI	TTSAA	9 cut(s)	13, 64, 118, 236, 907, 925, 1041, 1271, 1629
AjnI	CCWGG	2 cut(s)	497, 1522
Alw21I	GWGCWC	1 cut(s)	247
Alw26I	GTCTC	2 cut(s)	356, 1587
Ama87I	CYCGRG	3 cut(s)	386, 1254, 1409
AoxI	GGCC	8 cut(s)	82, 255, 536, 893, 1196, 1261, 1326, 1437
ApeKI	GCWGC	4 cut(s)	623, 632, 1013, 1382
ApoI	RAATTY	2 cut(s)	113, 1350
ArsI	GACNNNNNNTTYG	2 cut(s)	1652, 1684
Asp700I	GAANNNNTTC	1 cut(s)	165
AspLEI	GCGC	1 cut(s)	935
AspS9I	GGNCC	1 cut(s)	1326
AsuC2I	CCSGG	4 cut(s)	300, 424, 517, 886
AsuHPI	GGTGA	6 cut(s)	82, 169, 461, 577, 796, 1577
AsuII	TTCGAA	1 cut(s)	587
AsuNHI	GCTAGC	1 cut(s)	1249
AvaI	CYCGRG	3 cut(s)	386, 1254, 1409
BaeGI	GKGCMC	1 cut(s)	1024
BalI	TGGCCA	1 cut(s)	1439
BauI	CACGAG	1 cut(s)	353
BbsI	GAAGAC	2 cut(s)	192, 224
Bbv12I	GWGCWC	1 cut(s)	247
BbvI	GCAGC	4 cut(s)	610, 644, 1025, 1369
BccI	CCATC	4 cut(s)	775, 811, 830, 1771
BceAI	ACGGC	2 cut(s)	97, 519
BcgI	CGANNNNNNTGC	4 cut(s)	1400, 1434, 1715, 1749
BciT130I	CCWGG	2 cut(s)	499, 1524
BciVI	GTATCC	1 cut(s)	968
BclI	TGATCA	4 cut(s)	87, 250, 937, 1201
BcnI	CCSGG	4 cut(s)	300, 424, 517, 886
BcoDI	GTCTC	2 cut(s)	356, 1587
BfaI	CTAG	8 cut(s)	456, 594, 612, 762, 857, 1089, 1250, 1311
BfmI	CTRYAG	2 cut(s)	630, 1383
BfrI	CTTAAG	1 cut(s)	1181
BfuAI	ACCTGC	1 cut(s)	955
BfuI	GTATCC	1 cut(s)	968
BisI	GCNGC	6 cut(s)	346, 527, 624, 633, 1014, 1383
BlsI	GCNGC	6 cut(s)	347, 528, 625, 634, 1015, 1384
Bme1390I	CCNGG	6 cut(s)	300, 424, 499, 517, 886, 1524
BmeT110I	CYCGRG	3 cut(s)	386, 1254, 1409
BmgT120I	GGNCC	1 cut(s)	1326
BmrFI	CCNGG	6 cut(s)	300, 424, 499, 517, 886, 1524
BmrI	ACTGGG	2 cut(s)	446, 696
BmsI	GCATC	4 cut(s)	349, 558, 1074, 1545
BmtI	GCTAGC	1 cut(s)	1253
BmuI	ACTGGG	2 cut(s)	446, 696
BpiI	GAAGAC	2 cut(s)	192, 224
Bpu14I	TTCGAA	1 cut(s)	587
BpuEI	CTTGAG	1 cut(s)	1636
BpuMI	CCSGG	4 cut(s)	300, 424, 517, 886
BsaAI	YACGTR	2 cut(s)	523, 1207
BsaBI	GATNNNNATC	1 cut(s)	1541
BsaJI	CCNNGG	2 cut(s)	298, 1278
Bsc4I	CCNNNNNNNGG	2 cut(s)	891, 1338
Bse118I	RCCGGY	1 cut(s)	1263
Bse1I	ACTGG	2 cut(s)	441, 691
Bse8I	GATNNNNATC	1 cut(s)	1541
BseBI	CCWGG	2 cut(s)	499, 1524
BseDI	CCNNGG	2 cut(s)	298, 1278
BseGI	GGATG	6 cut(s)	364, 706, 841, 1089, 1504, 1641
BseJI	GATNNNNATC	1 cut(s)	1541
BseLI	CCNNNNNNNGG	2 cut(s)	891, 1338
BseMII	CTCAG	3 cut(s)	494, 1148, 1520
BseNI	ACTGG	2 cut(s)	441, 691
BseRI	GAGGAG	2 cut(s)	1703, 1706
BseSI	GKGCMC	1 cut(s)	1024
BseXI	GCAGC	4 cut(s)	610, 644, 1025, 1369
Bsh1236I	CGCG	1 cut(s)	1064
BshFI	GGCC	8 cut(s)	84, 257, 538, 895, 1198, 1263, 1328, 1439
BsiHKAI	GWGCWC	1 cut(s)	247
BsiHKCI	CYCGRG	3 cut(s)	386, 1254, 1409
BsiSI	CCGG	6 cut(s)	288, 300, 423, 516, 885, 1264
BslFI	GGGAC	2 cut(s)	867, 1783
BslI	CCNNNNNNNGG	2 cut(s)	891, 1338
BsmAI	GTCTC	2 cut(s)	356, 1587
BsmFI	GGGAC	2 cut(s)	867, 1783
BsmI	GAATGC	3 cut(s)	132, 931, 1742
BsnI	GGCC	8 cut(s)	84, 257, 538, 895, 1198, 1263, 1328, 1439
BsoBI	CYCGRG	3 cut(s)	386, 1254, 1409
Bsp119I	TTCGAA	1 cut(s)	587
Bsp1286I	GDGCHC	2 cut(s)	247, 1024
Bsp143I	GATC	7 cut(s)	87, 250, 937, 1201, 1542, 1576, 1606
BspACI	CCGC	5 cut(s)	151, 345, 526, 682, 914
BspANI	GGCC	8 cut(s)	84, 257, 538, 895, 1198, 1263, 1328, 1439
BspCNI	CTCAG	3 cut(s)	493, 1147, 1521
BspFNI	CGCG	1 cut(s)	1064
BspMAI	CTGCAG	2 cut(s)	634, 1387
BspMI	ACCTGC	1 cut(s)	955
BspOI	GCTAGC	1 cut(s)	1253
BspQI	GCTCTTC	1 cut(s)	1164
BspT104I	TTCGAA	1 cut(s)	587
BspTI	CTTAAG	1 cut(s)	1181
BsrFI	RCCGGY	1 cut(s)	1263
BsrI	ACTGG	2 cut(s)	441, 691
BssAI	RCCGGY	1 cut(s)	1263
BssECI	CCNNGG	2 cut(s)	298, 1278
BssMI	GATC	7 cut(s)	87, 250, 937, 1201, 1542, 1576, 1606
BssSI	CACGAG	1 cut(s)	353
Bst2BI	CACGAG	1 cut(s)	353
Bst2UI	CCWGG	2 cut(s)	499, 1524
Bst4CI	ACNGT	3 cut(s)	242, 320, 607
Bst6I	CTCTTC	4 cut(s)	573, 836, 843, 1164
BstAFI	CTTAAG	1 cut(s)	1181
BstAPI	GCANNNNNTGC	1 cut(s)	1019
BstBAI	YACGTR	2 cut(s)	523, 1207
BstBI	TTCGAA	1 cut(s)	587
BstC8I	GCNNGC	6 cut(s)	931, 1251, 1261, 1371, 1380, 1734
BstDEI	CTNAG	3 cut(s)	480, 1134, 1529
BstF5I	GGATG	6 cut(s)	364, 706, 841, 1089, 1504, 1641
BstFNI	CGCG	1 cut(s)	1064
BstHHI	GCGC	1 cut(s)	935
BstKTI	GATC	7 cut(s)	90, 253, 940, 1204, 1545, 1579, 1609
BstMAI	GTCTC	2 cut(s)	356, 1587
BstMBI	GATC	7 cut(s)	87, 250, 937, 1201, 1542, 1576, 1606
BstNI	CCWGG	2 cut(s)	499, 1524
BstNSI	RCATGY	1 cut(s)	1562
BstSCI	CCNGG	6 cut(s)	298, 422, 497, 515, 884, 1522
BstSFI	CTRYAG	2 cut(s)	630, 1383
BstSLI	GKGCMC	1 cut(s)	1024
BstUI	CGCG	1 cut(s)	1064
BstV1I	GCAGC	4 cut(s)	610, 644, 1025, 1369
BstV2I	GAAGAC	2 cut(s)	192, 224
BsuI	GTATCC	1 cut(s)	968
BsuRI	GGCC	8 cut(s)	84, 257, 538, 895, 1198, 1263, 1328, 1439
BtgZI	GCGATG	2 cut(s)	521, 827
BtsCI	GGATG	6 cut(s)	364, 706, 841, 1089, 1504, 1641
BtsI	GCAGTG	1 cut(s)	1053
BtsIMutI	CAGTG	2 cut(s)	603, 1053
BveI	ACCTGC	1 cut(s)	955
Cac8I	GCNNGC	6 cut(s)	931, 1251, 1261, 1371, 1380, 1734
CfoI	GCGC	1 cut(s)	935
Cfr10I	RCCGGY	1 cut(s)	1263
Cfr13I	GGNCC	1 cut(s)	1326
CseI	GACGC	1 cut(s)	461
CsiI	ACCWGGT	1 cut(s)	1522
Csp6I	GTAC	5 cut(s)	334, 520, 968, 1191, 1236
CviAII	CATG	8 cut(s)	668, 804, 941, 971, 979, 1355, 1559, 1679
CviQI	GTAC	5 cut(s)	334, 520, 968, 1191, 1236
DdeI	CTNAG	3 cut(s)	480, 1134, 1529
DpnI	GATC	7 cut(s)	89, 252, 939, 1203, 1544, 1578, 1608
DpnII	GATC	7 cut(s)	87, 250, 937, 1201, 1542, 1576, 1606
EaeI	YGGCCR	2 cut(s)	1261, 1437
Eam1104I	CTCTTC	4 cut(s)	573, 836, 843, 1164
EarI	CTCTTC	4 cut(s)	573, 836, 843, 1164
Eco147I	AGGCCT	2 cut(s)	538, 895
Eco57I	CTGAAG	2 cut(s)	1145, 1815
Eco88I	CYCGRG	3 cut(s)	386, 1254, 1409
EcoRI	GAATTC	1 cut(s)	1350
EcoRII	CCWGG	2 cut(s)	497, 1522
EcoT22I	ATGCAT	1 cut(s)	1560
FaeI	CATG	8 cut(s)	671, 807, 944, 974, 982, 1358, 1562, 1682
FaqI	GGGAC	2 cut(s)	867, 1783
FatI	CATG	8 cut(s)	667, 803, 940, 970, 978, 1354, 1558, 1678
FauI	CCCGC	1 cut(s)	907
FauNDI	CATATG	1 cut(s)	1032
FbaI	TGATCA	4 cut(s)	87, 250, 937, 1201
Fnu4HI	GCNGC	6 cut(s)	346, 527, 624, 633, 1014, 1383
FokI	GGATG	6 cut(s)	371, 713, 848, 1096, 1511, 1648
Fsp4HI	GCNGC	6 cut(s)	346, 527, 624, 633, 1014, 1383
FspBI	CTAG	8 cut(s)	456, 594, 612, 762, 857, 1089, 1250, 1311
GlaI	GCGC	1 cut(s)	934
GluI	GCNGC	6 cut(s)	346, 527, 624, 633, 1014, 1383
HaeIII	GGCC	8 cut(s)	84, 257, 538, 895, 1198, 1263, 1328, 1439
HapII	CCGG	6 cut(s)	288, 300, 423, 516, 885, 1264
HgaI	GACGC	1 cut(s)	461
HhaI	GCGC	1 cut(s)	935
Hin1II	CATG	8 cut(s)	671, 807, 944, 974, 982, 1358, 1562, 1682
Hin6I	GCGC	1 cut(s)	933
HinP1I	GCGC	1 cut(s)	933
HindIII	AAGCTT	2 cut(s)	443, 1730
HinfI	GANTC	7 cut(s)	664, 787, 952, 1172, 1414, 1771, 1804
HpaII	CCGG	6 cut(s)	288, 300, 423, 516, 885, 1264
HphI	GGTGA	6 cut(s)	82, 169, 461, 577, 796, 1577
Hpy166II	GTNNAC	3 cut(s)	603, 1110, 1622
Hpy188I	TCNGA	5 cut(s)	483, 642, 727, 1137, 1530
Hpy188III	TCNNGA	8 cut(s)	248, 791, 1094, 1241, 1546, 1615, 1658, 1780
Hpy8I	GTNNAC	3 cut(s)	603, 1110, 1622
HpyAV	CCTTC	3 cut(s)	43, 652, 1640
HpyCH4III	ACNGT	3 cut(s)	242, 320, 607
HpyCH4IV	ACGT	3 cut(s)	522, 1206, 1362
HpyCH4V	TGCA	9 cut(s)	102, 571, 632, 1013, 1347, 1385, 1558, 1736, 1742
HpyF3I	CTNAG	3 cut(s)	480, 1134, 1529
HpySE526I	ACGT	3 cut(s)	522, 1206, 1362
Hsp92II	CATG	8 cut(s)	671, 807, 944, 974, 982, 1358, 1562, 1682
HspAI	GCGC	1 cut(s)	933
Ksp22I	TGATCA	4 cut(s)	87, 250, 937, 1201
Kzo9I	GATC	7 cut(s)	87, 250, 937, 1201, 1542, 1576, 1606
LguI	GCTCTTC	1 cut(s)	1164
LmnI	GCTCC	2 cut(s)	871, 1693
Lsp1109I	GCAGC	4 cut(s)	610, 644, 1025, 1369
LweI	GCATC	4 cut(s)	349, 558, 1074, 1545
MabI	ACCWGGT	1 cut(s)	1522
MaeI	CTAG	8 cut(s)	456, 594, 612, 762, 857, 1089, 1250, 1311
MaeII	ACGT	3 cut(s)	522, 1206, 1362
MaeIII	GTNAC	9 cut(s)	140, 171, 187, 449, 799, 1173, 1207, 1429, 1474
MalI	GATC	7 cut(s)	89, 252, 939, 1203, 1544, 1578, 1608
MboI	GATC	7 cut(s)	87, 250, 937, 1201, 1542, 1576, 1606
MboII	GAAGA	9 cut(s)	52, 192, 224, 590, 853, 860, 1151, 1283, 1655
MhlI	GDGCHC	2 cut(s)	247, 1024
MlsI	TGGCCA	1 cut(s)	1439
MluCI	AATT	5 cut(s)	5, 113, 490, 1335, 1350
MluI	ACGCGT	1 cut(s)	1062
MluNI	TGGCCA	1 cut(s)	1439
MlyI	GAGTC	2 cut(s)	1181, 1765
MmeI	TCCRAC	6 cut(s)	339, 672, 705, 1105, 1514, 1552
Mox20I	TGGCCA	1 cut(s)	1439
Mph1103I	ATGCAT	1 cut(s)	1560
MroXI	GAANNNNTTC	1 cut(s)	165
MscI	TGGCCA	1 cut(s)	1439
MseI	TTAA	4 cut(s)	44, 1182, 1334, 1800
Msp20I	TGGCCA	1 cut(s)	1439
MspA1I	CMGCKG	1 cut(s)	635
MspCI	CTTAAG	1 cut(s)	1181
MspI	CCGG	6 cut(s)	288, 300, 423, 516, 885, 1264
MspR9I	CCNGG	6 cut(s)	300, 424, 499, 517, 886, 1524
Mva1269I	GAATGC	3 cut(s)	132, 931, 1742
MvaI	CCWGG	2 cut(s)	499, 1524
MvnI	CGCG	1 cut(s)	1064
NciI	CCSGG	4 cut(s)	300, 424, 517, 886
NdeI	CATATG	1 cut(s)	1032
NdeII	GATC	7 cut(s)	87, 250, 937, 1201, 1542, 1576, 1606
NheI	GCTAGC	1 cut(s)	1249
NlaIII	CATG	8 cut(s)	671, 807, 944, 974, 982, 1358, 1562, 1682
NmeAIII	GCCGAG	2 cut(s)	1174, 1303
NmuCI	GTSAC	4 cut(s)	187, 449, 799, 1173
NsiI	ATGCAT	1 cut(s)	1560
NspI	RCATGY	1 cut(s)	1562
NspV	TTCGAA	1 cut(s)	587
PceI	AGGCCT	2 cut(s)	538, 895
PciSI	GCTCTTC	1 cut(s)	1164
PcsI	WCGNNNNNNNCGW	1 cut(s)	300
PctI	GAATGC	3 cut(s)	132, 931, 1742
PdmI	GAANNNNTTC	1 cut(s)	165
PfeI	GAWTC	5 cut(s)	664, 787, 952, 1414, 1804
PfoI	TCCNGGA	1 cut(s)	497
PkrI	GCNGC	6 cut(s)	347, 528, 625, 634, 1015, 1384
PleI	GAGTC	2 cut(s)	1180, 1765
PpsI	GAGTC	2 cut(s)	1180, 1765
Ppu21I	YACGTR	2 cut(s)	523, 1207
PsiI	TTATAA	1 cut(s)	1289
Psp6I	CCWGG	2 cut(s)	497, 1522
PspGI	CCWGG	2 cut(s)	497, 1522
PspPI	GGNCC	1 cut(s)	1326
PsrI	GAACNNNNNNTAC	2 cut(s)	1700, 1732
PstI	CTGCAG	2 cut(s)	634, 1387
PvuII	CAGCTG	1 cut(s)	635
RsaI	GTAC	5 cut(s)	335, 521, 969, 1192, 1237
RsaNI	GTAC	5 cut(s)	334, 520, 968, 1191, 1236
SapI	GCTCTTC	1 cut(s)	1164
SaqAI	TTAA	4 cut(s)	44, 1182, 1334, 1800
SatI	GCNGC	6 cut(s)	346, 527, 624, 633, 1014, 1383
Sau3AI	GATC	7 cut(s)	87, 250, 937, 1201, 1542, 1576, 1606
Sau96I	GGNCC	1 cut(s)	1326
SchI	GAGTC	2 cut(s)	1181, 1765
ScrFI	CCNGG	6 cut(s)	300, 424, 499, 517, 886, 1524
SduI	GDGCHC	2 cut(s)	247, 1024
SexAI	ACCWGGT	1 cut(s)	1522
SfaNI	GCATC	4 cut(s)	349, 558, 1074, 1545
SfcI	CTRYAG	2 cut(s)	630, 1383
SfuI	TTCGAA	1 cut(s)	587
SmlI	CTYRAG	2 cut(s)	1181, 1615
SmoI	CTYRAG	2 cut(s)	1181, 1615
Sse9I	AATT	5 cut(s)	5, 113, 490, 1335, 1350
SseBI	AGGCCT	2 cut(s)	538, 895
SsiI	CCGC	5 cut(s)	151, 345, 526, 682, 914
SspMI	CTAG	8 cut(s)	456, 594, 612, 762, 857, 1089, 1250, 1311
StuI	AGGCCT	2 cut(s)	538, 895
StyD4I	CCNGG	6 cut(s)	298, 422, 497, 515, 884, 1522
TaaI	ACNGT	3 cut(s)	242, 320, 607
TaiI	ACGT	3 cut(s)	525, 1209, 1365
TaqI	TCGA	4 cut(s)	294, 587, 774, 790
TasI	AATT	5 cut(s)	5, 113, 490, 1335, 1350
TatI	WGTACW	1 cut(s)	1235
TauI	GCSGC	2 cut(s)	348, 529
TfiI	GAWTC	5 cut(s)	664, 787, 952, 1414, 1804
Tru1I	TTAA	4 cut(s)	44, 1182, 1334, 1800
Tru9I	TTAA	4 cut(s)	44, 1182, 1334, 1800
TscAI	CASTG	2 cut(s)	610, 1060
TseFI	GTSAC	4 cut(s)	187, 449, 799, 1173
TseI	GCWGC	4 cut(s)	623, 632, 1013, 1382
Tsp45I	GTSAC	4 cut(s)	187, 449, 799, 1173
TspGWI	ACGGA	1 cut(s)	1000
TspRI	CASTG	2 cut(s)	610, 1060
Vha464I	CTTAAG	1 cut(s)	1181
XapI	RAATTY	2 cut(s)	113, 1350
XceI	RCATGY	1 cut(s)	1562
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1530
XmnI	GAANNNNTTC	1 cut(s)	165
XspI	CTAG	8 cut(s)	456, 594, 612, 762, 857, 1089, 1250, 1311
Zsp2I	ATGCAT	1 cut(s)	1560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.