Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0016202

Physical Location & Seq

Genomic Coordinates Reverse (-)

15527905 .. 15530028

Gene Structure 2124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47836

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGAAATTCTTAAATGAGAAAATCTCAAAGTCCTTTCCTCTACCATTCTTCAACAGAACCCACTCATTTTCTTCACAAACAAACTTAAACAAACCTTTAACCCATAAATCTTTCTTCAAATCAAACACCAAAGACGGCCTGGTTAGCCGTTTATGCAAAGACGGGAAATTTACACAAGCCATAGACATTCTTTGCGACCAAAACCGCTTAGCCGAAGCAGTTCAATTACTCAGCCACATTGTTAGACCCTCTACTTCTCTATACTCGACCCTCTTACAGCATTGTCTTCAGCACCGTGCTCTTGATCAGGCCAAATTGGTCCATTCCCACACAAGAGTCTCCGGTTTCGAGCCGGGGCTTTTCCTTTGTAACCGTTTCATTGATTTGTACGCAAAATGTGGGAGTCTTTTGGACGCCCAGAAGGTGTTTGAGGAAATGCCTGAGAGGGATTTGTGTTCTTGGAATACTATGATTTCTGGGTATGCCAAAGTGCGGAAGATCGGTGAAGCTAGGAAACTGTTTGATGAAATGCCTCAAAGAGATAATTTTTCTTGGACGGCGATGATTTCCGGGTACGTTCGGCACCAAAGGCCTAATGAGGCTTTGGAGTTGTATAGGACGATGCAGAGACGAGAGTGTTCAAAGTCTAACAAGTTCACTGTGTCTAGCGTTCTTGCTGCTTCAGCAGCTATTCACAGTTTGAGAATGGGGAAGGAGATTCATGGTTATATAACGCGAACTGGGTTGGACTCGGATGAGGTGGTTTGGACTGCCTTGTCGGATATGTATGGGAAATGTGGGAGTATAGAGGAAGCTAGGCGCATTTTCGATAAGATGGTGAATCGAGATGTTGTGACATGGACGGCGATGATTGGGAGATACTTTGAGGATGGGAAGAAGGACGAGGGACTTGCCTTGTTTTCGGAGTTGATGAAATCCGGGATTAGACCTAATGAGTTCACGTTTGCAGGGGTTTTGAATGCCTGTGCTGATCATGCTACTGAGAACCTAGGCAAGCAGGTACAAGGATACATGACACGGATAGGATTCGATCCCTTTTCGTTTGCAGCAAGTGCCCTTGTTCATATGTATTCAAAGTGTGGAAACACTGCTAATGCGAATAAGGTGTTGAAAGGGATGCCCGGTCCAGATTTGGTTTCATGGACTTCCCTCATTGTTGGATATGCTCAGAGTGGTCAAGCTGAGGAGGCTCTTCAGTTGTTTGAGTCACTACTTAAATCAGGTACTCGGCCTGATCACGTAACATTTGTAGGTGTTCTTTCAGCTTGTACTCATGCTGGATTAGTCGATAAAGGACTTGAGTATTTCTATTCTATTAAGGCAAAACATGGGTTAAAACATACTGCGGACCACTATGCATGCGTAGTTGATTTGTTAGCCCGAGCTGGCCGATTTGATGAAGCCGAGAATATTATAAGTGAAATGCCCATGAAGCCTAGTAAGTTCTTATGGGCCTCCTTAATTGGTGGTTGTAGAATTCATGGAAACGTCAAGCTGGCAAAGCGAGCTGCAGAGGCATTGTTTGAGATAGAACCTGAGAATCCTGCTACTTATGTTACTCTGGCCAACATTTACGCTACCGCTGGCATGTGGAGTGAAGTAACAAAGGTTAGAAAGGAAATGGATGAAAGTGGGATAATAAAGAAACCAGGTCTGAGTTGGATTGAGATCAAGAGAGAGATGCATGTTTTCTTAGTTGGAGATCAGTCTCACCCCAGATACAATGAAATAGATCACTTTTTGAGTGAAATTTCGAAGAGGATGAAAGAAGAAGGGTATGTTCCTGACACGAACTTTGTGCTGCATGATGTTGAGGAGGAGCAGAAAGAGCAGAACCTCTCGTACCACAGTGAGAAGCTTGCAGTTGCATTCGGCATTGTTTCTACTCCACCAGGAACTGCAATCAAGGTTTTTAAGAATTTAAGAACATGTGTAGATTGTCATAATGCAATTAAATTTATTTCCAAGATTTCTAACAGAAAAATAGTAGTGCGGGATTCAAATCGATTCCATTGGTTTGAGGATGGGAAGTGTTCATGTCTCGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

691

Amino Acids

78.05

Weight (kDa)

8.57

Isoelectric Point (pI)

37.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	149 - 177	7.6e-06	PPR repeat
PPR_2	PF13041	150 - 180	3.9e-07	PPR repeat family
PPR	PF01535	153 - 180	5.9e-08	PPR repeat
PPR_2	PF13041	181 - 225	3.8e-08	PPR repeat family
PPR	PF01535	183 - 213	3.8e-07	PPR repeat
PPR_2	PF13041	282 - 330	1.6e-11	PPR repeat family
PPR_2	PF13041	383 - 430	1.9e-10	PPR repeat family
PPR	PF01535	386 - 415	9.9e-07	PPR repeat
E_motif	PF20431	501 - 563	1.2e-21	E motif
DYW_deaminase	PF14432	599 - 691	4.5e-41	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37170
fragaria_vesca	FvH4_1g15050 FvH4_1g15080
malus_domestica	MD15G1276800.v1.1
prunus_persica	Prupe.7G139900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0104091 RchiOBHm_Chr2g0104101
rosa_laevigata	RLG00000017288 RLG00000017299
rosa_multiflora	Rmu_ssc0000257.1_g000009
rosa_rugosa	Rorug02G0119400
rosa_samantha	Rh2BG176100 Rh2CG174500 Rh2CG174700
rosa_wichuraiana	Rw2G013220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1436
AasI	GACNNNNNNGTC	1 cut(s)	775
Acc36I	ACCTGC	1 cut(s)	1009
AccB1I	GGYRCC	1 cut(s)	582
AccII	CGCG	1 cut(s)	736
AciI	CCGC	5 cut(s)	205, 493, 1367, 1602, 2014
AclWI	GGATC	1 cut(s)	1046
AcoI	YGGCCR	2 cut(s)	1408, 1584
AcsI	RAATTY	6 cut(s)	5, 167, 1497, 1770, 1939, 1976
AcuI	CTGAAG	3 cut(s)	272, 666, 1199
AcyI	GRCGYC	1 cut(s)	414
AfaI	GTAC	6 cut(s)	389, 575, 1023, 1246, 1291, 1865
AfiI	CCNNNNNNNGG	1 cut(s)	492
AflIII	ACRYGT	1 cut(s)	1949
AgsI	TTSAA	8 cut(s)	52, 118, 224, 642, 979, 1095, 1132, 2022
AjnI	CCWGG	3 cut(s)	138, 1669, 1912
AluBI	AGCT	9 cut(s)	509, 689, 815, 1202, 1286, 1406, 1516, 1529, 1879
AluI	AGCT	9 cut(s)	509, 689, 815, 1202, 1286, 1406, 1516, 1529, 1879
Alw21I	GWGCWC	1 cut(s)	301
Alw26I	GTCTC	4 cut(s)	343, 622, 1734, 2066
AlwI	GGATC	1 cut(s)	1046
AlwNI	CAGNNNCTG	1 cut(s)	1919
Ama87I	CYCGRG	1 cut(s)	1401
AoxI	GGCC	7 cut(s)	136, 309, 590, 1250, 1408, 1473, 1584
ApeKI	GCWGC	5 cut(s)	677, 686, 1067, 1529, 1822
ApoI	RAATTY	6 cut(s)	5, 167, 1497, 1770, 1939, 1976
ArsI	GACNNNNNNTTYG	2 cut(s)	1799, 1831
Asp700I	GAANNNNTTC	1 cut(s)	219
AspA2I	CCTAGG	1 cut(s)	1009
AspLEI	GCGC	1 cut(s)	822
AspS9I	GGNCC	4 cut(s)	319, 1145, 1369, 1473
AsuC2I	CCSGG	4 cut(s)	354, 571, 940, 1143
AsuHPI	GGTGA	3 cut(s)	515, 850, 1724
AsuII	TTCGAA	1 cut(s)	1775
AvaI	CYCGRG	1 cut(s)	1401
AvaII	GGWCC	3 cut(s)	319, 1145, 1369
AvrII	CCTAGG	1 cut(s)	1009
BaeGI	GKGCMC	1 cut(s)	1078
BalI	TGGCCA	1 cut(s)	1586
BanI	GGYRCC	1 cut(s)	582
BbsI	GAAGAC	1 cut(s)	278
Bbv12I	GWGCWC	1 cut(s)	301
BbvCI	CCTCAGC	1 cut(s)	1203
BbvI	GCAGC	5 cut(s)	664, 698, 1079, 1516, 1809
BccI	CCATC	3 cut(s)	829, 884, 2039
BceAI	ACGGC	4 cut(s)	132, 151, 573, 879
BcgI	CGANNNNNNTGC	4 cut(s)	893, 927, 1801, 1835
BciT130I	CCWGG	3 cut(s)	140, 1671, 1914
BciVI	GTATCC	1 cut(s)	1022
BclI	TGATCA	3 cut(s)	304, 991, 1255
BcnI	CCSGG	4 cut(s)	354, 571, 940, 1143
BcoDI	GTCTC	4 cut(s)	343, 622, 1734, 2066
BfaI	CTAG	5 cut(s)	510, 666, 816, 1010, 1458
BfmI	CTRYAG	1 cut(s)	1530
BfuAI	ACCTGC	1 cut(s)	1009
BfuI	GTATCC	1 cut(s)	1022
BisI	GCNGC	5 cut(s)	678, 687, 1068, 1530, 1823
BlnI	CCTAGG	1 cut(s)	1009
BlpI	GCTNAGC	1 cut(s)	208
BlsI	GCNGC	5 cut(s)	679, 688, 1069, 1531, 1824
Bme1390I	CCNGG	7 cut(s)	140, 354, 571, 940, 1143, 1671, 1914
Bme18I	GGWCC	3 cut(s)	319, 1145, 1369
BmeT110I	CYCGRG	1 cut(s)	1401
BmgT120I	GGNCC	4 cut(s)	319, 1145, 1369, 1473
BmiI	GGNNCC	1 cut(s)	584
BmrFI	CCNGG	7 cut(s)	140, 354, 571, 940, 1143, 1671, 1914
BmrI	ACTGGG	1 cut(s)	750
BmsI	GCATC	3 cut(s)	612, 1128, 1692
BmuI	ACTGGG	1 cut(s)	750
BpiI	GAAGAC	1 cut(s)	278
BplI	GAGNNNNNCTC	2 cut(s)	8, 40
Bpu10I	CCTNAGC	1 cut(s)	1203
Bpu1102I	GCTNAGC	1 cut(s)	208
Bpu14I	TTCGAA	1 cut(s)	1775
BpuEI	CTTGAG	1 cut(s)	1340
BpuMI	CCSGG	4 cut(s)	354, 571, 940, 1143
Bsa29I	ATCGAT	1 cut(s)	2026
BsaAI	YACGTR	1 cut(s)	1261
BsaBI	GATNNNNATC	2 cut(s)	1688, 2022
BsaHI	GRCGYC	1 cut(s)	414
BsaJI	CCNNGG	2 cut(s)	353, 1009
BsaWI	WCCGGW	1 cut(s)	341
Bsc4I	CCNNNNNNNGG	1 cut(s)	492
Bse1I	ACTGG	1 cut(s)	745
Bse8I	GATNNNNATC	2 cut(s)	1688, 2022
BseBI	CCWGG	3 cut(s)	140, 1671, 1914
BseCI	ATCGAT	1 cut(s)	2026
BseDI	CCNNGG	2 cut(s)	353, 1009
BseGI	GGATG	6 cut(s)	760, 895, 1143, 1651, 1788, 2050
BseJI	GATNNNNATC	2 cut(s)	1688, 2022
BseLI	CCNNNNNNNGG	1 cut(s)	492
BseMII	CTCAG	7 cut(s)	244, 432, 993, 1194, 1202, 1548, 1667
BseNI	ACTGG	1 cut(s)	745
BseRI	GAGGAG	3 cut(s)	1220, 1850, 1853
BseSI	GKGCMC	1 cut(s)	1078
BseXI	GCAGC	5 cut(s)	664, 698, 1079, 1516, 1809
Bsh1236I	CGCG	1 cut(s)	736
BshFI	GGCC	7 cut(s)	138, 311, 592, 1252, 1410, 1475, 1586
BshNI	GGYRCC	1 cut(s)	582
BshVI	ATCGAT	1 cut(s)	2026
BsiHKAI	GWGCWC	1 cut(s)	301
BsiHKCI	CYCGRG	1 cut(s)	1401
BsiSI	CCGG	5 cut(s)	342, 353, 570, 939, 1143
BslFI	GGGAC	1 cut(s)	921
BslI	CCNNNNNNNGG	1 cut(s)	492
BsmAI	GTCTC	4 cut(s)	343, 622, 1734, 2066
BsmBI	CGTCTC	1 cut(s)	622
BsmFI	GGGAC	1 cut(s)	921
BsmI	GAATGC	2 cut(s)	985, 1889
BsnI	GGCC	7 cut(s)	138, 311, 592, 1252, 1410, 1475, 1586
BsoBI	CYCGRG	1 cut(s)	1401
Bsp119I	TTCGAA	1 cut(s)	1775
Bsp1286I	GDGCHC	2 cut(s)	301, 1078
Bsp143I	GATC	8 cut(s)	304, 498, 991, 1051, 1255, 1689, 1723, 1753
Bsp1720I	GCTNAGC	1 cut(s)	208
BspACI	CCGC	5 cut(s)	205, 493, 1367, 1602, 2014
BspANI	GGCC	7 cut(s)	138, 311, 592, 1252, 1410, 1475, 1586
BspCNI	CTCAG	7 cut(s)	243, 433, 994, 1195, 1201, 1549, 1668
BspDI	ATCGAT	1 cut(s)	2026
BspFNI	CGCG	1 cut(s)	736
BspLI	GGNNCC	1 cut(s)	584
BspMAI	CTGCAG	1 cut(s)	1534
BspMI	ACCTGC	1 cut(s)	1009
BspPI	GGATC	1 cut(s)	1046
BspQI	GCTCTTC	1 cut(s)	1218
BspT104I	TTCGAA	1 cut(s)	1775
BspT107I	GGYRCC	1 cut(s)	582
BsrI	ACTGG	1 cut(s)	745
BssECI	CCNNGG	2 cut(s)	353, 1009
BssMI	GATC	8 cut(s)	304, 498, 991, 1051, 1255, 1689, 1723, 1753
BssNI	GRCGYC	1 cut(s)	414
BssT1I	CCWWGG	1 cut(s)	1009
Bst2UI	CCWGG	3 cut(s)	140, 1671, 1914
Bst4CI	ACNGT	6 cut(s)	296, 374, 519, 661, 698, 1871
Bst6I	CTCTTC	2 cut(s)	1218, 1772
BstACI	GRCGYC	1 cut(s)	414
BstAPI	GCANNNNNTGC	1 cut(s)	1073
BstBAI	YACGTR	1 cut(s)	1261
BstBI	TTCGAA	1 cut(s)	1775
BstC8I	GCNNGC	7 cut(s)	1016, 1381, 1408, 1518, 1527, 1606, 1881
BstDEI	CTNAG	9 cut(s)	208, 230, 441, 1002, 1188, 1203, 1557, 1676, 1714
BstF5I	GGATG	6 cut(s)	760, 895, 1143, 1651, 1788, 2050
BstFNI	CGCG	1 cut(s)	736
BstHHI	GCGC	1 cut(s)	822
BstKTI	GATC	8 cut(s)	307, 501, 994, 1054, 1258, 1692, 1726, 1756
BstMAI	GTCTC	4 cut(s)	343, 622, 1734, 2066
BstMBI	GATC	8 cut(s)	304, 498, 991, 1051, 1255, 1689, 1723, 1753
BstNI	CCWGG	3 cut(s)	140, 1671, 1914
BstNSI	RCATGY	4 cut(s)	1383, 1612, 1709, 1953
BstSCI	CCNGG	7 cut(s)	138, 352, 569, 938, 1141, 1669, 1912
BstSFI	CTRYAG	1 cut(s)	1530
BstSLI	GKGCMC	1 cut(s)	1078
BstUI	CGCG	1 cut(s)	736
BstV1I	GCAGC	5 cut(s)	664, 698, 1079, 1516, 1809
BstV2I	GAAGAC	1 cut(s)	278
Bsu15I	ATCGAT	1 cut(s)	2026
BsuI	GTATCC	1 cut(s)	1022
BsuRI	GGCC	7 cut(s)	138, 311, 592, 1252, 1410, 1475, 1586
BsuTUI	ATCGAT	1 cut(s)	2026
BtgZI	GCGATG	2 cut(s)	575, 881
BtsCI	GGATG	6 cut(s)	760, 895, 1143, 1651, 1788, 2050
BtsI	GCAGTG	1 cut(s)	1107
BtsIMutI	CAGTG	3 cut(s)	657, 1107, 1876
BveI	ACCTGC	1 cut(s)	1009
Cac8I	GCNNGC	7 cut(s)	1016, 1381, 1408, 1518, 1527, 1606, 1881
CaiI	CAGNNNCTG	1 cut(s)	1919
CfoI	GCGC	1 cut(s)	822
Cfr13I	GGNCC	4 cut(s)	319, 1145, 1369, 1473
ClaI	ATCGAT	1 cut(s)	2026
CseI	GACGC	1 cut(s)	422
CsiI	ACCWGGT	1 cut(s)	1669
Csp6I	GTAC	6 cut(s)	388, 574, 1022, 1245, 1290, 1864
CviQI	GTAC	6 cut(s)	388, 574, 1022, 1245, 1290, 1864
DdeI	CTNAG	9 cut(s)	208, 230, 441, 1002, 1188, 1203, 1557, 1676, 1714
DpnI	GATC	8 cut(s)	306, 500, 993, 1053, 1257, 1691, 1725, 1755
DpnII	GATC	8 cut(s)	304, 498, 991, 1051, 1255, 1689, 1723, 1753
DrdI	GACNNNNNNGTC	1 cut(s)	775
DseDI	GACNNNNNNGTC	1 cut(s)	775
EaeI	YGGCCR	2 cut(s)	1408, 1584
Eam1104I	CTCTTC	2 cut(s)	1218, 1772
EarI	CTCTTC	2 cut(s)	1218, 1772
Eco130I	CCWWGG	1 cut(s)	1009
Eco147I	AGGCCT	1 cut(s)	592
Eco47I	GGWCC	3 cut(s)	319, 1145, 1369
Eco57I	CTGAAG	3 cut(s)	272, 666, 1199
Eco88I	CYCGRG	1 cut(s)	1401
EcoRI	GAATTC	1 cut(s)	1497
EcoRII	CCWGG	3 cut(s)	138, 1669, 1912
EcoT14I	CCWWGG	1 cut(s)	1009
EcoT22I	ATGCAT	2 cut(s)	1381, 1707
ErhI	CCWWGG	1 cut(s)	1009
Esp3I	CGTCTC	1 cut(s)	622
FaqI	GGGAC	1 cut(s)	921
FauI	CCCGC	1 cut(s)	2007
FauNDI	CATATG	1 cut(s)	1086
FbaI	TGATCA	3 cut(s)	304, 991, 1255
Fnu4HI	GCNGC	5 cut(s)	678, 687, 1068, 1530, 1823
FokI	GGATG	6 cut(s)	767, 902, 1150, 1658, 1795, 2057
Fsp4HI	GCNGC	5 cut(s)	678, 687, 1068, 1530, 1823
FspBI	CTAG	5 cut(s)	510, 666, 816, 1010, 1458
GlaI	GCGC	1 cut(s)	821
GluI	GCNGC	5 cut(s)	678, 687, 1068, 1530, 1823
HaeIII	GGCC	7 cut(s)	138, 311, 592, 1252, 1410, 1475, 1586
HapII	CCGG	5 cut(s)	342, 353, 570, 939, 1143
HgaI	GACGC	1 cut(s)	422
HhaI	GCGC	1 cut(s)	822
Hin1I	GRCGYC	1 cut(s)	414
Hin6I	GCGC	1 cut(s)	820
HinP1I	GCGC	1 cut(s)	820
HindIII	AAGCTT	1 cut(s)	1877
HpaII	CCGG	5 cut(s)	342, 353, 570, 939, 1143
HphI	GGTGA	3 cut(s)	515, 850, 1724
Hpy166II	GTNNAC	2 cut(s)	657, 960
Hpy188I	TCNGA	5 cut(s)	754, 781, 925, 1191, 1677
Hpy188III	TCNNGA	6 cut(s)	302, 845, 1148, 1693, 1805, 2063
Hpy8I	GTNNAC	2 cut(s)	657, 960
HpyAV	CCTTC	4 cut(s)	415, 706, 892, 1787
HpyCH4III	ACNGT	6 cut(s)	296, 374, 519, 661, 698, 1871
HpyCH4IV	ACGT	4 cut(s)	576, 962, 1260, 1509
HpyF3I	CTNAG	9 cut(s)	208, 230, 441, 1002, 1188, 1203, 1557, 1676, 1714
HpySE526I	ACGT	4 cut(s)	576, 962, 1260, 1509
Hsp92I	GRCGYC	1 cut(s)	414
HspAI	GCGC	1 cut(s)	820
Ksp22I	TGATCA	3 cut(s)	304, 991, 1255
Kzo9I	GATC	8 cut(s)	304, 498, 991, 1051, 1255, 1689, 1723, 1753
LguI	GCTCTTC	1 cut(s)	1218
LmnI	GCTCC	1 cut(s)	1840
Lsp1109I	GCAGC	5 cut(s)	664, 698, 1079, 1516, 1809
LweI	GCATC	3 cut(s)	612, 1128, 1692
MabI	ACCWGGT	1 cut(s)	1669
MaeI	CTAG	5 cut(s)	510, 666, 816, 1010, 1458
MaeII	ACGT	4 cut(s)	576, 962, 1260, 1509
MaeIII	GTNAC	6 cut(s)	368, 853, 1227, 1261, 1576, 1621
MalI	GATC	8 cut(s)	306, 500, 993, 1053, 1257, 1691, 1725, 1755
MboI	GATC	8 cut(s)	304, 498, 991, 1051, 1255, 1689, 1723, 1753
MboII	GAAGA	9 cut(s)	40, 63, 106, 278, 508, 907, 1205, 1789, 1802
MhlI	GDGCHC	2 cut(s)	301, 1078
MlsI	TGGCCA	1 cut(s)	1586
MluNI	TGGCCA	1 cut(s)	1586
MlyI	GAGTC	4 cut(s)	345, 412, 743, 1235
MmeI	TCCRAC	5 cut(s)	726, 759, 1159, 1661, 1699
Mox20I	TGGCCA	1 cut(s)	1586
Mph1103I	ATGCAT	2 cut(s)	1381, 1707
MroXI	GAANNNNTTC	1 cut(s)	219
MscI	TGGCCA	1 cut(s)	1586
Msp20I	TGGCCA	1 cut(s)	1586
MspA1I	CMGCKG	1 cut(s)	1604
MspI	CCGG	5 cut(s)	342, 353, 570, 939, 1143
MspR9I	CCNGG	7 cut(s)	140, 354, 571, 940, 1143, 1671, 1914
Mva1269I	GAATGC	2 cut(s)	985, 1889
MvaI	CCWGG	3 cut(s)	140, 1671, 1914
MvnI	CGCG	1 cut(s)	736
NciI	CCSGG	4 cut(s)	354, 571, 940, 1143
NdeI	CATATG	1 cut(s)	1086
NdeII	GATC	8 cut(s)	304, 498, 991, 1051, 1255, 1689, 1723, 1753
NlaIV	GGNNCC	1 cut(s)	584
NmeAIII	GCCGAG	2 cut(s)	1228, 1450
NmuCI	GTSAC	2 cut(s)	853, 1227
NsiI	ATGCAT	2 cut(s)	1381, 1707
NspI	RCATGY	4 cut(s)	1383, 1612, 1709, 1953
NspV	TTCGAA	1 cut(s)	1775
PaeI	GCATGC	1 cut(s)	1383
PceI	AGGCCT	1 cut(s)	592
PciI	ACATGT	1 cut(s)	1949
PciSI	GCTCTTC	1 cut(s)	1218
PctI	GAATGC	2 cut(s)	985, 1889
PdmI	GAANNNNTTC	1 cut(s)	219
PfeI	GAWTC	6 cut(s)	718, 841, 1047, 1561, 2018, 2028
PfoI	TCCNGGA	1 cut(s)	938
PkrI	GCNGC	5 cut(s)	679, 688, 1069, 1531, 1824
PleI	GAGTC	4 cut(s)	344, 411, 743, 1234
PpsI	GAGTC	4 cut(s)	344, 411, 743, 1234
Ppu21I	YACGTR	1 cut(s)	1261
PscI	ACATGT	1 cut(s)	1949
PsiI	TTATAA	1 cut(s)	1436
Psp6I	CCWGG	3 cut(s)	138, 1669, 1912
PspGI	CCWGG	3 cut(s)	138, 1669, 1912
PspN4I	GGNNCC	1 cut(s)	584
PspPI	GGNCC	4 cut(s)	319, 1145, 1369, 1473
PsrI	GAACNNNNNNTAC	2 cut(s)	1847, 1879
PstI	CTGCAG	1 cut(s)	1534
PstNI	CAGNNNCTG	1 cut(s)	1919
RsaI	GTAC	6 cut(s)	389, 575, 1023, 1246, 1291, 1865
RsaNI	GTAC	6 cut(s)	388, 574, 1022, 1245, 1290, 1864
SapI	GCTCTTC	1 cut(s)	1218
SatI	GCNGC	5 cut(s)	678, 687, 1068, 1530, 1823
Sau3AI	GATC	8 cut(s)	304, 498, 991, 1051, 1255, 1689, 1723, 1753
Sau96I	GGNCC	4 cut(s)	319, 1145, 1369, 1473
SchI	GAGTC	4 cut(s)	345, 412, 743, 1235
ScrFI	CCNGG	7 cut(s)	140, 354, 571, 940, 1143, 1671, 1914
SduI	GDGCHC	2 cut(s)	301, 1078
SexAI	ACCWGGT	1 cut(s)	1669
SfaNI	GCATC	3 cut(s)	612, 1128, 1692
SfcI	CTRYAG	1 cut(s)	1530
SfuI	TTCGAA	1 cut(s)	1775
SinI	GGWCC	3 cut(s)	319, 1145, 1369
SmlI	CTYRAG	1 cut(s)	1319
SmoI	CTYRAG	1 cut(s)	1319
SphI	GCATGC	1 cut(s)	1383
SseBI	AGGCCT	1 cut(s)	592
SsiI	CCGC	5 cut(s)	205, 493, 1367, 1602, 2014
SspI	AATATT	1 cut(s)	1432
SspMI	CTAG	5 cut(s)	510, 666, 816, 1010, 1458
StuI	AGGCCT	1 cut(s)	592
StyD4I	CCNGG	7 cut(s)	138, 352, 569, 938, 1141, 1669, 1912
StyI	CCWWGG	1 cut(s)	1009
TaaI	ACNGT	6 cut(s)	296, 374, 519, 661, 698, 1871
TaiI	ACGT	4 cut(s)	579, 965, 1263, 1512
TaqI	TCGA	9 cut(s)	266, 348, 828, 844, 1050, 1308, 1775, 2026, 2064
TatI	WGTACW	1 cut(s)	1289
TfiI	GAWTC	6 cut(s)	718, 841, 1047, 1561, 2018, 2028
TscAI	CASTG	3 cut(s)	664, 1114, 1876
TseFI	GTSAC	2 cut(s)	853, 1227
TseI	GCWGC	5 cut(s)	677, 686, 1067, 1529, 1822
Tsp45I	GTSAC	2 cut(s)	853, 1227
TspGWI	ACGGA	1 cut(s)	1054
TspRI	CASTG	3 cut(s)	664, 1114, 1876
VpaK11BI	GGWCC	3 cut(s)	319, 1145, 1369
XapI	RAATTY	6 cut(s)	5, 167, 1497, 1770, 1939, 1976
XceI	RCATGY	4 cut(s)	1383, 1612, 1709, 1953
XcmI	CCANNNNNNNNNTGG	2 cut(s)	136, 1677
XmaJI	CCTAGG	1 cut(s)	1009
XmnI	GAANNNNTTC	1 cut(s)	219
XspI	CTAG	5 cut(s)	510, 666, 816, 1010, 1458
Zsp2I	ATGCAT	2 cut(s)	1381, 1707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.