Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0016202

Physical Location & Seq

Genomic Coordinates Reverse (-)

24327282 .. 24329360

Gene Structure 2079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1276800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGAAATCCTTGAATCTAAAAGTTTCCAGGCATTTTTCTCTGCTATTATTTAACAGAACCCATTCATCATCTTCTCAAACTTCCCAACTAAATAAACCCCAAATTCAGAAAACCTTCTTCAAATCCAACACCAAAGACGCCCTCATAAGCCGCTTATGCAATGACGGAAAATTCAAAGAAGCCATCGACATCCTCTGCCACCAAAGGCGCTTATCAGAAGCAGTTCAGTTGCTCCACCACATAGACAAACCCTCTGCTTCCATATACTCCACCCTCTTGCAGCTTTGTCTTCACCAACGAGCTCTTGCGCAGGGCAAATTGGTCCACGCCCACACCAGAGCCTCCGGGTTCGTGCCCGGGATGTTCATTTGTAACCGTCTTATTGACATGTATGCGAAATGCGGGAGCATTGTGGATGCCCAGATGGTGTTTGATGAAATGCCTGAGAGGGATTTGTGTTCTTGGAATACTATGATTTCTGGGTATGCGAAAGTGGGGCAGCTTGCTGAAGCTAGGAAACTGTTTGATGAAATGCCTCAGAGAGATAATTTTTCTTGGACTGCGGTGATATCAGGATATGTTCGTCACGATAAACCAAAAGATGCTTTGTGGTTGTATAGGATGATGCAGAGGAGCGAGAATTCTAAATCTAATAAGTTCACGGTGTCTAGCGTTCTTGCTGCTTCAGCAGCCATTCAGAGTTTGAGAATGGGGAAGGAGATTCATGGTTATATAATGCGAACTGGGCTGGACTCAGATGAGGTGGTTTGGAGTGCCTTATCGGATATGTATGGGAAATGTGGGAGTATAGAGGAAGCTAGGCGCATTTTTGATAAGATGGTGAATCGAGATATTGTTACATGGACAGCAATGATTGATAGATACTTTGAGGATGGGAGGAAGGAAGAGGGATTTTCTCTGTTCTCGGAGTTGATGAAGTCCGGCATTAGACCGAACGAGTTCACCTTTGCAGGGGTTTTGAATGCCTGCGCTCAGCATGCTGCTGAGAACTTGGGCAAGCAGGTTCACGGGTACATGACGCGGATTGGATTTGACCCCTTGTCTTTTGCAGCAAGTGCACTTGTTCATATGTATTCAAAGTGTGGAAACATTGAGAATGCGAATAAGGTGTTTAATGAGATGCCCTGCCCAGATGTGGTTTCATGGACTTCCCTGATTGCTGGACATGCTCAGAATGGTCAACCTAATGAGGCCCTTCAGTTGTTTAAGTTACTACTTGATTCAGGTACTAAGCCTGATCACATTACCTTTGTAGGTGTTCTTTCCGCATGTACTCATGCTGGTTTAGTTGATAAGGGACTTGAATACTTCCATTCAATTAAGGCAAAACATGGGTTAACGCATACCGCGGACCACTATTCCTGTGTAGTTGATTTATTGGCCCGAGCAGGTCGATTTGAAGAAGCTAAGAATATTATTAATGAAATGCCAATGAAACCAGATAAGTACTTGTGGGCTTCCTTAATCGGTGGCTGCAGAATTCATGGAAACCTCACACTCGCAAAGCGAGCTGCAGATGCGTTGTTTGAGATAGAACCTGAGAATCCAACTACTTATATTACTCTGGCCAACATTTATGCTACTGCTGGTATGTGGGGTGAAGTAACAGAGGTCAGAAAGATGATGGATAAAAGAGGGCTGATAAAGAAACCAGGTTTGAGTTGGATCGAGATCAAGAGAGAGGTGCATGTTTTCTTAGTGGGAGATACGTCTCACCCGAGATATGATGAAATAGATCACTATTTGCATGAGCTTTCGAAGAGGATGAAGGAAGAAGGGTATGTCCCCGACACGAATTTTGTGCTGCATGATGTTGAAGAGGAGCAGAAAGAGCAGAACCTCTCCTACCACGGTGAAAAGCTCGCCGTTGCGTTTGGCATTATTTCTACTCCGCCGGGAACACCGATCAAGGTTTTTAAGAACTTAAGAACATGTGTAGATTGTCATACTGCGATTAAGTTTGTTTCTAAGATTGCTAACAGAAAAATTATAGTCCGGGATTCAAATCGGTTCCATTGTTTTGAGGGCGGGATCTGTTCATGTCGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

693

Amino Acids

78.19

Weight (kDa)

8.48

Isoelectric Point (pI)

35.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	150 - 178	1.7e-07	PPR repeat
PPR_2	PF13041	151 - 181	7.1e-08	PPR repeat family
PPR	PF01535	154 - 181	1.1e-08	PPR repeat
PPR	PF01535	184 - 212	3.2e-06	PPR repeat
PPR_2	PF13041	283 - 331	2.7e-12	PPR repeat family
PPR_2	PF13041	384 - 431	6.8e-11	PPR repeat family
PPR	PF01535	387 - 416	2.6e-06	PPR repeat
E_motif	PF20431	502 - 564	6.4e-19	E motif
DYW_deaminase	PF14432	600 - 692	8.1e-40	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37170
fragaria_vesca	FvH4_1g15050 FvH4_1g15080
malus_domestica	MD15G1276800.v1.1
prunus_persica	Prupe.7G139900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0104091 RchiOBHm_Chr2g0104101
rosa_laevigata	RLG00000017288 RLG00000017299
rosa_multiflora	Rmu_ssc0000257.1_g000009
rosa_rugosa	Rorug02G0119400
rosa_samantha	Rh2BG176100 Rh2CG174500 Rh2CG174700
rosa_wichuraiana	Rw2G013220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	309
Acc36I	ACCTGC	2 cut(s)	1012, 1400
AccII	CGCG	2 cut(s)	1042, 1370
AciI	CCGC	9 cut(s)	151, 402, 563, 1042, 1287, 1368, 1370, 1913, 2049
AclWI	GGATC	2 cut(s)	1694, 2060
AcoI	YGGCCR	1 cut(s)	1587
AcsI	RAATTY	5 cut(s)	102, 170, 640, 1500, 1816
AcuI	CTGAAG	3 cut(s)	528, 669, 1202
AcyI	GRCGYC	1 cut(s)	138
AfaI	GTAC	4 cut(s)	1034, 1249, 1294, 1469
AfiI	CCNNNNNNNGG	2 cut(s)	972, 1156
AflII	CTTAAG	1 cut(s)	1945
AflIII	ACRYGT	2 cut(s)	387, 1952
AhdI	GACNNNNNGTC	1 cut(s)	1060
AjnI	CCWGG	2 cut(s)	26, 1672
AluBI	AGCT	9 cut(s)	283, 302, 502, 512, 818, 1427, 1532, 1774, 1882
AluI	AGCT	9 cut(s)	283, 302, 502, 512, 818, 1427, 1532, 1774, 1882
Alw21I	GWGCWC	2 cut(s)	304, 1081
Alw26I	GTCTC	1 cut(s)	1737
Alw44I	GTGCAC	1 cut(s)	1077
AlwI	GGATC	2 cut(s)	1694, 2060
Ama87I	CYCGRG	3 cut(s)	356, 1404, 1738
AoxI	GGCC	3 cut(s)	1212, 1401, 1587
ApaLI	GTGCAC	1 cut(s)	1077
ApeKI	GCWGC	9 cut(s)	280, 499, 680, 689, 1001, 1070, 1494, 1532, 1825
ApoI	RAATTY	5 cut(s)	102, 170, 640, 1500, 1816
ArsI	GACNNNNNNTTYG	2 cut(s)	1802, 1834
AseI	ATTAAT	1 cut(s)	1440
Asp700I	GAANNNNTTC	4 cut(s)	61, 113, 222, 959
AspLEI	GCGC	4 cut(s)	210, 310, 825, 992
AspS9I	GGNCC	4 cut(s)	322, 1213, 1372, 1402
AsuC2I	CCSGG	5 cut(s)	346, 357, 358, 1917, 2018
AsuHPI	GGTGA	7 cut(s)	284, 577, 853, 955, 1631, 1727, 1886
AsuII	TTCGAA	1 cut(s)	1778
AvaI	CYCGRG	3 cut(s)	356, 1404, 1738
AvaII	GGWCC	2 cut(s)	322, 1372
BaeGI	GKGCMC	2 cut(s)	357, 1081
BalI	TGGCCA	1 cut(s)	1589
BanII	GRGCYC	1 cut(s)	304
BbsI	GAAGAC	1 cut(s)	281
Bbv12I	GWGCWC	2 cut(s)	304, 1081
BbvI	GCAGC	9 cut(s)	292, 511, 667, 701, 988, 1082, 1481, 1519, 1812
BccI	CCATC	5 cut(s)	191, 418, 832, 887, 1639
BceAI	ACGGC	1 cut(s)	1871
BcgI	CGANNNNNNTGC	2 cut(s)	1804, 1838
BciT130I	CCWGG	2 cut(s)	28, 1674
BclI	TGATCA	1 cut(s)	1258
BcnI	CCSGG	5 cut(s)	346, 357, 358, 1917, 2018
BcoDI	GTCTC	1 cut(s)	1737
BfaI	CTAG	3 cut(s)	513, 669, 819
BfmI	CTRYAG	2 cut(s)	1495, 1533
BfoI	RGCGCY	1 cut(s)	211
BfrI	CTTAAG	1 cut(s)	1945
BfuAI	ACCTGC	2 cut(s)	1012, 1400
BlpI	GCTNAGC	1 cut(s)	993
BmcAI	AGTACT	1 cut(s)	1469
Bme1390I	CCNGG	7 cut(s)	28, 346, 357, 358, 1674, 1917, 2018
Bme18I	GGWCC	2 cut(s)	322, 1372
BmeRI	GACNNNNNGTC	1 cut(s)	1060
BmeT110I	CYCGRG	3 cut(s)	356, 1404, 1738
BmgT120I	GGNCC	4 cut(s)	322, 1213, 1372, 1402
BmiI	GGNNCC	1 cut(s)	2033
BmrFI	CCNGG	7 cut(s)	28, 346, 357, 358, 1674, 1917, 2018
BmrI	ACTGGG	1 cut(s)	753
BmsI	GCATC	5 cut(s)	406, 592, 615, 1131, 1528
BmuI	ACTGGG	1 cut(s)	753
BpiI	GAAGAC	1 cut(s)	281
Bpu1102I	GCTNAGC	1 cut(s)	993
Bpu14I	TTCGAA	1 cut(s)	1778
BpuMI	CCSGG	5 cut(s)	346, 357, 358, 1917, 2018
BsaBI	GATNNNNATC	2 cut(s)	1691, 2025
BsaHI	GRCGYC	1 cut(s)	138
BsaJI	CCNNGG	3 cut(s)	356, 1368, 1870
Bsc4I	CCNNNNNNNGG	2 cut(s)	972, 1156
Bse1I	ACTGG	1 cut(s)	748
Bse3DI	GCAATG	2 cut(s)	166, 876
Bse8I	GATNNNNATC	2 cut(s)	1691, 2025
BseBI	CCWGG	2 cut(s)	28, 1674
BseDI	CCNNGG	3 cut(s)	356, 1368, 1870
BseGI	GGATG	6 cut(s)	189, 366, 421, 627, 898, 1791
BseJI	GATNNNNATC	2 cut(s)	1691, 2025
BseLI	CCNNNNNNNGG	2 cut(s)	972, 1156
BseMI	GCAATG	2 cut(s)	166, 876
BseMII	CTCAG	7 cut(s)	435, 551, 768, 996, 1007, 1205, 1551
BseNI	ACTGG	1 cut(s)	748
BseRI	GAGGAG	2 cut(s)	646, 1856
BseSI	GKGCMC	2 cut(s)	357, 1081
BseXI	GCAGC	9 cut(s)	292, 511, 667, 701, 988, 1082, 1481, 1519, 1812
Bsh1236I	CGCG	2 cut(s)	1042, 1370
BshFI	GGCC	3 cut(s)	1214, 1403, 1589
BsiHKAI	GWGCWC	2 cut(s)	304, 1081
BsiHKCI	CYCGRG	3 cut(s)	356, 1404, 1738
BsiSI	CCGG	5 cut(s)	345, 357, 942, 1916, 2017
BslFI	GGGAC	2 cut(s)	1332, 1790
BslI	CCNNNNNNNGG	2 cut(s)	972, 1156
BsmAI	GTCTC	1 cut(s)	1737
BsmBI	CGTCTC	1 cut(s)	1737
BsmFI	GGGAC	2 cut(s)	1332, 1790
BsmI	GAATGC	2 cut(s)	988, 1123
BsnI	GGCC	3 cut(s)	1214, 1403, 1589
BsoBI	CYCGRG	3 cut(s)	356, 1404, 1738
Bsp119I	TTCGAA	1 cut(s)	1778
Bsp1286I	GDGCHC	3 cut(s)	304, 357, 1081
Bsp143I	GATC	6 cut(s)	1258, 1686, 1692, 1756, 1926, 2052
Bsp1720I	GCTNAGC	1 cut(s)	993
BspACI	CCGC	9 cut(s)	151, 402, 563, 1042, 1287, 1368, 1370, 1913, 2049
BspANI	GGCC	3 cut(s)	1214, 1403, 1589
BspCNI	CTCAG	7 cut(s)	436, 550, 767, 997, 1006, 1204, 1552
BspFNI	CGCG	2 cut(s)	1042, 1370
BspLI	GGNNCC	1 cut(s)	2033
BspMAI	CTGCAG	2 cut(s)	1499, 1537
BspMI	ACCTGC	2 cut(s)	1012, 1400
BspPI	GGATC	2 cut(s)	1694, 2060
BspT104I	TTCGAA	1 cut(s)	1778
BspTI	CTTAAG	1 cut(s)	1945
BsrDI	GCAATG	2 cut(s)	166, 876
BsrI	ACTGG	1 cut(s)	748
BssECI	CCNNGG	3 cut(s)	356, 1368, 1870
BssMI	GATC	6 cut(s)	1258, 1686, 1692, 1756, 1926, 2052
BssNI	GRCGYC	1 cut(s)	138
Bst2UI	CCWGG	2 cut(s)	28, 1674
Bst4CI	ACNGT	4 cut(s)	377, 522, 664, 1874
Bst6I	CTCTTC	3 cut(s)	900, 1775, 1833
BstACI	GRCGYC	1 cut(s)	138
BstAFI	CTTAAG	1 cut(s)	1945
BstAPI	GCANNNNNTGC	1 cut(s)	1076
BstBI	TTCGAA	1 cut(s)	1778
BstC8I	GCNNGC	6 cut(s)	504, 988, 999, 1019, 1530, 1884
BstDSI	CCRYGG	2 cut(s)	1368, 1870
BstF5I	GGATG	6 cut(s)	189, 366, 421, 627, 898, 1791
BstFNI	CGCG	2 cut(s)	1042, 1370
BstH2I	RGCGCY	1 cut(s)	211
BstHHI	GCGC	4 cut(s)	210, 310, 825, 992
BstKTI	GATC	6 cut(s)	1261, 1689, 1695, 1759, 1929, 2055
BstMAI	GTCTC	1 cut(s)	1737
BstMBI	GATC	6 cut(s)	1258, 1686, 1692, 1756, 1926, 2052
BstNI	CCWGG	2 cut(s)	28, 1674
BstNSI	RCATGY	6 cut(s)	391, 1001, 1190, 1293, 1712, 1956
BstSCI	CCNGG	7 cut(s)	26, 344, 355, 356, 1672, 1915, 2016
BstSFI	CTRYAG	2 cut(s)	1495, 1533
BstSLI	GKGCMC	2 cut(s)	357, 1081
BstUI	CGCG	2 cut(s)	1042, 1370
BstV1I	GCAGC	9 cut(s)	292, 511, 667, 701, 988, 1082, 1481, 1519, 1812
BstV2I	GAAGAC	1 cut(s)	281
BstX2I	RGATCY	1 cut(s)	2052
BstYI	RGATCY	1 cut(s)	2052
BsuRI	GGCC	3 cut(s)	1214, 1403, 1589
BtgI	CCRYGG	2 cut(s)	1368, 1870
BtsCI	GGATG	6 cut(s)	189, 366, 421, 627, 898, 1791
BveI	ACCTGC	2 cut(s)	1012, 1400
Cac8I	GCNNGC	6 cut(s)	504, 988, 999, 1019, 1530, 1884
CfoI	GCGC	4 cut(s)	210, 310, 825, 992
Cfr13I	GGNCC	4 cut(s)	322, 1213, 1372, 1402
Cfr42I	CCGCGG	1 cut(s)	1371
Cfr9I	CCCGGG	1 cut(s)	356
CseI	GACGC	2 cut(s)	146, 1048
CsiI	ACCWGGT	1 cut(s)	1672
Csp6I	GTAC	4 cut(s)	1033, 1248, 1293, 1468
CviQI	GTAC	4 cut(s)	1033, 1248, 1293, 1468
DpnI	GATC	6 cut(s)	1260, 1688, 1694, 1758, 1928, 2054
DpnII	GATC	6 cut(s)	1258, 1686, 1692, 1756, 1926, 2052
DriI	GACNNNNNGTC	1 cut(s)	1060
EaeI	YGGCCR	1 cut(s)	1587
Eam1104I	CTCTTC	3 cut(s)	900, 1775, 1833
Eam1105I	GACNNNNNGTC	1 cut(s)	1060
EarI	CTCTTC	3 cut(s)	900, 1775, 1833
EciI	GGCGGA	1 cut(s)	1902
Ecl136II	GAGCTC	1 cut(s)	302
Eco24I	GRGCYC	1 cut(s)	304
Eco32I	GATATC	1 cut(s)	570
Eco47I	GGWCC	2 cut(s)	322, 1372
Eco53kI	GAGCTC	1 cut(s)	302
Eco57I	CTGAAG	3 cut(s)	528, 669, 1202
Eco88I	CYCGRG	3 cut(s)	356, 1404, 1738
EcoICRI	GAGCTC	1 cut(s)	302
EcoO109I	RGGNCCY	1 cut(s)	1213
EcoRI	GAATTC	2 cut(s)	640, 1500
EcoRII	CCWGG	2 cut(s)	26, 1672
EcoRV	GATATC	1 cut(s)	570
EcoT38I	GRGCYC	1 cut(s)	304
Esp3I	CGTCTC	1 cut(s)	1737
FaqI	GGGAC	2 cut(s)	1332, 1790
FauI	CCCGC	2 cut(s)	395, 2042
FauNDI	CATATG	1 cut(s)	1089
FbaI	TGATCA	1 cut(s)	1258
FokI	GGATG	6 cut(s)	176, 373, 428, 634, 905, 1798
FriOI	GRGCYC	1 cut(s)	304
FspBI	CTAG	3 cut(s)	513, 669, 819
FspI	TGCGCA	1 cut(s)	309
GlaI	GCGC	4 cut(s)	209, 309, 824, 991
HaeII	RGCGCY	1 cut(s)	211
HaeIII	GGCC	3 cut(s)	1214, 1403, 1589
HapII	CCGG	5 cut(s)	345, 357, 942, 1916, 2017
HgaI	GACGC	2 cut(s)	146, 1048
HhaI	GCGC	4 cut(s)	210, 310, 825, 992
Hin1I	GRCGYC	1 cut(s)	138
Hin6I	GCGC	4 cut(s)	208, 308, 823, 990
HinP1I	GCGC	4 cut(s)	208, 308, 823, 990
HincII	GTYRAC	2 cut(s)	1202, 1359
HindII	GTYRAC	2 cut(s)	1202, 1359
HinfI	GANTC	7 cut(s)	13, 721, 752, 844, 1241, 1564, 2021
HpaI	GTTAAC	1 cut(s)	1359
HpaII	CCGG	5 cut(s)	345, 357, 942, 1916, 2017
HphI	GGTGA	7 cut(s)	284, 577, 853, 955, 1631, 1727, 1886
Hpy166II	GTNNAC	7 cut(s)	325, 660, 963, 1027, 1079, 1202, 1359
Hpy188I	TCNGA	9 cut(s)	108, 217, 540, 699, 757, 784, 928, 1194, 1637
Hpy188III	TCNNGA	6 cut(s)	573, 587, 848, 1690, 1696, 2066
Hpy8I	GTNNAC	7 cut(s)	325, 660, 963, 1027, 1079, 1202, 1359
HpyAV	CCTTC	6 cut(s)	124, 709, 895, 1226, 1783, 1790
HpyCH4III	ACNGT	4 cut(s)	377, 522, 664, 1874
HpyCH4IV	ACGT	1 cut(s)	1730
HpySE526I	ACGT	1 cut(s)	1730
Hsp92I	GRCGYC	1 cut(s)	138
HspAI	GCGC	4 cut(s)	208, 308, 823, 990
Ksp22I	TGATCA	1 cut(s)	1258
KspAI	GTTAAC	1 cut(s)	1359
KspI	CCGCGG	1 cut(s)	1371
Kzo9I	GATC	6 cut(s)	1258, 1686, 1692, 1756, 1926, 2052
LmnI	GCTCC	4 cut(s)	237, 405, 633, 1843
Lsp1109I	GCAGC	9 cut(s)	292, 511, 667, 701, 988, 1082, 1481, 1519, 1812
LweI	GCATC	5 cut(s)	406, 592, 615, 1131, 1528
MabI	ACCWGGT	1 cut(s)	1672
MaeI	CTAG	3 cut(s)	513, 669, 819
MaeII	ACGT	1 cut(s)	1730
MaeIII	GTNAC	5 cut(s)	371, 584, 856, 1230, 1624
MalI	GATC	6 cut(s)	1260, 1688, 1694, 1758, 1928, 2054
MboI	GATC	6 cut(s)	1258, 1686, 1692, 1756, 1926, 2052
MboII	GAAGA	8 cut(s)	63, 109, 281, 917, 1433, 1792, 1805, 1850
MflI	RGATCY	1 cut(s)	2052
MhlI	GDGCHC	3 cut(s)	304, 357, 1081
MlsI	TGGCCA	1 cut(s)	1589
MluCI	AATT	9 cut(s)	102, 170, 317, 547, 640, 1338, 1500, 1816, 2007
MluNI	TGGCCA	1 cut(s)	1589
MlyI	GAGTC	1 cut(s)	746
MmeI	TCCRAC	3 cut(s)	150, 1592, 1664
Mox20I	TGGCCA	1 cut(s)	1589
MroXI	GAANNNNTTC	4 cut(s)	61, 113, 222, 959
MscI	TGGCCA	1 cut(s)	1589
Msp20I	TGGCCA	1 cut(s)	1589
MspA1I	CMGCKG	1 cut(s)	1370
MspCI	CTTAAG	1 cut(s)	1945
MspI	CCGG	5 cut(s)	345, 357, 942, 1916, 2017
MspR9I	CCNGG	7 cut(s)	28, 346, 357, 358, 1674, 1917, 2018
Mva1269I	GAATGC	2 cut(s)	988, 1123
MvaI	CCWGG	2 cut(s)	28, 1674
MvnI	CGCG	2 cut(s)	1042, 1370
NciI	CCSGG	5 cut(s)	346, 357, 358, 1917, 2018
NdeI	CATATG	1 cut(s)	1089
NdeII	GATC	6 cut(s)	1258, 1686, 1692, 1756, 1926, 2052
NlaIV	GGNNCC	1 cut(s)	2033
NmuCI	GTSAC	1 cut(s)	584
NsbI	TGCGCA	1 cut(s)	309
NspI	RCATGY	6 cut(s)	391, 1001, 1190, 1293, 1712, 1956
NspV	TTCGAA	1 cut(s)	1778
PaeI	GCATGC	1 cut(s)	1001
PciI	ACATGT	2 cut(s)	387, 1952
PcsI	WCGNNNNNNNCGW	1 cut(s)	1736
PctI	GAATGC	2 cut(s)	988, 1123
PdmI	GAANNNNTTC	4 cut(s)	61, 113, 222, 959
PfeI	GAWTC	6 cut(s)	13, 721, 844, 1241, 1564, 2021
PfoI	TCCNGGA	1 cut(s)	2016
PleI	GAGTC	1 cut(s)	746
PpsI	GAGTC	1 cut(s)	746
PscI	ACATGT	2 cut(s)	387, 1952
PshBI	ATTAAT	1 cut(s)	1440
Psp124BI	GAGCTC	1 cut(s)	304
Psp6I	CCWGG	2 cut(s)	26, 1672
PspGI	CCWGG	2 cut(s)	26, 1672
PspN4I	GGNNCC	1 cut(s)	2033
PspPI	GGNCC	4 cut(s)	322, 1213, 1372, 1402
PsrI	GAACNNNNNNTAC	2 cut(s)	1850, 1882
PstI	CTGCAG	2 cut(s)	1499, 1537
PsuI	RGATCY	1 cut(s)	2052
RsaI	GTAC	4 cut(s)	1034, 1249, 1294, 1469
RsaNI	GTAC	4 cut(s)	1033, 1248, 1293, 1468
SacI	GAGCTC	1 cut(s)	304
SacII	CCGCGG	1 cut(s)	1371
Sau3AI	GATC	6 cut(s)	1258, 1686, 1692, 1756, 1926, 2052
Sau96I	GGNCC	4 cut(s)	322, 1213, 1372, 1402
ScaI	AGTACT	1 cut(s)	1469
SchI	GAGTC	1 cut(s)	746
ScrFI	CCNGG	7 cut(s)	28, 346, 357, 358, 1674, 1917, 2018
SduI	GDGCHC	3 cut(s)	304, 357, 1081
SexAI	ACCWGGT	1 cut(s)	1672
SfaNI	GCATC	5 cut(s)	406, 592, 615, 1131, 1528
SfcI	CTRYAG	2 cut(s)	1495, 1533
Sfr303I	CCGCGG	1 cut(s)	1371
SfuI	TTCGAA	1 cut(s)	1778
SgrBI	CCGCGG	1 cut(s)	1371
SinI	GGWCC	2 cut(s)	322, 1372
SmaI	CCCGGG	1 cut(s)	358
SmlI	CTYRAG	1 cut(s)	1945
SmoI	CTYRAG	1 cut(s)	1945
SphI	GCATGC	1 cut(s)	1001
Sse9I	AATT	9 cut(s)	102, 170, 317, 547, 640, 1338, 1500, 1816, 2007
SsiI	CCGC	9 cut(s)	151, 402, 563, 1042, 1287, 1368, 1370, 1913, 2049
SspI	AATATT	1 cut(s)	1435
SspMI	CTAG	3 cut(s)	513, 669, 819
SstI	GAGCTC	1 cut(s)	304
StyD4I	CCNGG	7 cut(s)	26, 344, 355, 356, 1672, 1915, 2016
TaaI	ACNGT	4 cut(s)	377, 522, 664, 1874
TaiI	ACGT	1 cut(s)	1733
TaqI	TCGA	6 cut(s)	186, 847, 1414, 1689, 1778, 2065
TaqII	GACCGA	1 cut(s)	967
TasI	AATT	9 cut(s)	102, 170, 317, 547, 640, 1338, 1500, 1816, 2007
TatI	WGTACW	2 cut(s)	1292, 1467
TauI	GCSGC	1 cut(s)	153
TfiI	GAWTC	6 cut(s)	13, 721, 844, 1241, 1564, 2021
TseFI	GTSAC	1 cut(s)	584
TseI	GCWGC	9 cut(s)	280, 499, 680, 689, 1001, 1070, 1494, 1532, 1825
Tsp45I	GTSAC	1 cut(s)	584
TspGWI	ACGGA	1 cut(s)	180
TspMI	CCCGGG	1 cut(s)	356
Vha464I	CTTAAG	1 cut(s)	1945
VneI	GTGCAC	1 cut(s)	1077
VpaK11BI	GGWCC	2 cut(s)	322, 1372
VspI	ATTAAT	1 cut(s)	1440
XapI	RAATTY	5 cut(s)	102, 170, 640, 1500, 1816
XceI	RCATGY	6 cut(s)	391, 1001, 1190, 1293, 1712, 1956
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1680
XmaI	CCCGGG	1 cut(s)	356
XmnI	GAANNNNTTC	4 cut(s)	61, 113, 222, 959
XspI	CTAG	3 cut(s)	513, 669, 819
ZrmI	AGTACT	1 cut(s)	1469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.