Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0016202

Physical Location & Seq

Genomic Coordinates Reverse (-)

15004603 .. 15014973

Gene Structure 10371 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017288

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGAAATTGTTGAATGAGACGATCTCAAAGTTCTTTCCTCTACTATCCTTCAACAGAACCCGCTCATTTTCTTCTCAAACAAACTTAAATAAACCGTTAACTCAAAAATCTTTCTTCAAATCAAACACCAAAGACGGCCTGGTAAGCCGTTTATGCCAAGACGGGAAATTTACACAAGCCATAGACATTCTTTGCAACCAAAACCGCTTAGCCGCAGCAGTTCAGTTACTCAACCACATTGTTAGACCCTCTACTTCTCTATACTCGACCCTCTTACAGCATTGTCTTGAACACCGTGCTCTTGATCAGGCCAAATTGGTCCATTCCCACACAAGAGTCTCCGGTTTCGAGCCAGGGCTGTTCCTTTGTAACCGTTTCATTTATTTGTACGCAAAATGTGGGAGTCTTTTGGATGCCCAGAAGGTGTTTGATGAAATGCCTGAGAGGGATTTGTGTTCTTGGAATACTATGATTTCTGGGTATGCCAAAGTGGGGAAGATCGGTGAAGCTAGGAAACTGTTTGATGAAATGCCTCAAAGAGATAATTTTTCTTGGACGGCGATGATTTCCGGGTACGTTCGGCACGAAAGGCCTAATGAGGCTTTGGAGTTGTATAGGATGATGCAGAGACGAGAGAGTTCAAAGTCTAATAAGTTCACTGTGTCTAGCGTTCTTGCTGCTTCAGCAGCCATTCAGAGTTTGAGAACGGGGAAGGAGATTCATGGTTATATAATGCGAACTGGGTTGGACTCGGATGAGGTGGTTTGGAGTGCCTTGTCGGATATGTATGGGAAATGTAGGAGTATAGAGGAAGCTAGGTGTGTTTTTGATAAGATGGTGAATCGAGATGTTGTGACCTGGACGGCGATGATTGGGAGATACTTTGAGGATGGGAAGAAGGACGAGGGACTTGCCTTGTTTTCGGAGTTGATGAAATCCGGGATTAGACCTAATGAGTTCACGTTTGCAGGGGTTTTGAATGCCTGTGCTGATCATGCTACTGAGAACCTAGGCAAGCAGGTACATGGATACATGACACGGATAGGATTCGACCCCTTTTCATTTGCAGCAAGTGCCCTTGTTCATATGTATTCAAAGTGTGGAAACACTGCTAATGCGAATAAGGTGTTGAAAGGGATGCCCAGTCCAGATTTGGTTTCGTGGACTTCCCTCATTGTTGGATATGCTCAGAATGGTCAAGCTGAGGAAGCTCTTCAGTTGTTTGAGTCACTACTTAAATCAGTTACTCGGCCTGATCATGTAACATTTGTAGGTGTTCTTTCAGCTTGTACTCATGCTGGATTAGTCGAGAAAGGACTTGAGTATTTCCATTCTATTAAGGCAAAGCATGGGTTAAAACATACTGCGGACCACTATGCATGCGTAGTTGATTTGTTAGCCCGAGCTGGCCGATTTGAAGAAGCCGAGAATATTATAAGTGAAATGCCCATGAAGCGTAATCACTTTTTGAGTGAAATTTCTAAGAGGATGAAAGAAGAAGGGTATGTTCCTGACACGAACTTTGTGTTGCATGATGTTGAGGAGGAGCAGAAAGAGCAGAACCTCTCGTACCACAGTGAGAAGCTTGCAGTTGCATTCGGCATTGTTTCTACTCCACCAGGAACTCCAATCAAGGTTTTTAAGAATTTAAGAACATGTGTAGATTGTCATAATGCAATTAAATTTATTTCCAAGATTTCTAACAGAAAAATAGTAGTGCGAGATTCAAATCGATTCCATTGGTTTGAGGATGGGAAGTGTTCATGTCTCGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

594

Amino Acids

67.06

Weight (kDa)

8.62

Isoelectric Point (pI)

34.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	149 - 177	1.6e-07	PPR repeat
PPR_2	PF13041	150 - 180	7.3e-08	PPR repeat family
PPR	PF01535	153 - 180	5.7e-09	PPR repeat
PPR_2	PF13041	181 - 225	4.1e-07	PPR repeat family
PPR	PF01535	183 - 211	6.3e-08	PPR repeat
PPR_2	PF13041	282 - 330	1.3e-11	PPR repeat family
PPR_2	PF13041	383 - 430	3.1e-09	PPR repeat family
PPR	PF01535	386 - 413	1.6e-06	PPR repeat
DYW_deaminase	PF14432	501 - 593	3.3e-41	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37170
fragaria_vesca	FvH4_1g15050 FvH4_1g15080
malus_domestica	MD15G1276800.v1.1
prunus_persica	Prupe.7G139900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0104091 RchiOBHm_Chr2g0104101
rosa_laevigata	RLG00000017288 RLG00000017299
rosa_multiflora	Rmu_ssc0000257.1_g000009
rosa_rugosa	Rorug02G0119400
rosa_samantha	Rh2BG176100 Rh2CG174500 Rh2CG174700
rosa_wichuraiana	Rw2G013220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1436
Acc36I	ACCTGC	1 cut(s)	1009
AccBSI	CCGCTC	1 cut(s)	63
AciI	CCGC	4 cut(s)	61, 205, 213, 1367
AcoI	YGGCCR	1 cut(s)	1408
AcsI	RAATTY	4 cut(s)	167, 1476, 1645, 1682
AcuI	CTGAAG	2 cut(s)	666, 1199
AfaI	GTAC	5 cut(s)	389, 575, 1023, 1291, 1571
AfiI	CCNNNNNNNGG	1 cut(s)	492
AflIII	ACRYGT	1 cut(s)	1655
AjnI	CCWGG	4 cut(s)	138, 352, 857, 1618
AluBI	AGCT	7 cut(s)	509, 815, 1202, 1211, 1286, 1406, 1585
AluI	AGCT	7 cut(s)	509, 815, 1202, 1211, 1286, 1406, 1585
Alw21I	GWGCWC	1 cut(s)	301
Alw26I	GTCTC	4 cut(s)	11, 343, 622, 1772
Ama87I	CYCGRG	1 cut(s)	1401
AoxI	GGCC	5 cut(s)	136, 309, 590, 1250, 1408
ApeKI	GCWGC	4 cut(s)	215, 677, 686, 1067
ApoI	RAATTY	4 cut(s)	167, 1476, 1645, 1682
ArsI	GACNNNNNNTTYG	2 cut(s)	1505, 1537
Asp700I	GAANNNNTTC	1 cut(s)	1212
AspA2I	CCTAGG	1 cut(s)	1009
AspS9I	GGNCC	2 cut(s)	319, 1369
AsuC2I	CCSGG	2 cut(s)	571, 940
AsuHPI	GGTGA	2 cut(s)	515, 850
AvaI	CYCGRG	1 cut(s)	1401
AvaII	GGWCC	2 cut(s)	319, 1369
AvrII	CCTAGG	1 cut(s)	1009
BaeGI	GKGCMC	1 cut(s)	1078
Bbv12I	GWGCWC	1 cut(s)	301
BbvCI	CCTCAGC	1 cut(s)	1203
BbvI	GCAGC	4 cut(s)	227, 664, 698, 1079
BccI	CCATC	3 cut(s)	829, 884, 1745
BceAI	ACGGC	4 cut(s)	132, 151, 573, 879
BcgI	CGANNNNNNTGC	2 cut(s)	893, 927
BciT130I	CCWGG	4 cut(s)	140, 354, 859, 1620
BciVI	GTATCC	1 cut(s)	1022
BclI	TGATCA	3 cut(s)	304, 991, 1255
BcnI	CCSGG	2 cut(s)	571, 940
BcoDI	GTCTC	4 cut(s)	11, 343, 622, 1772
BfaI	CTAG	4 cut(s)	510, 666, 816, 1010
BfuAI	ACCTGC	1 cut(s)	1009
BfuI	GTATCC	1 cut(s)	1022
BisI	GCNGC	5 cut(s)	213, 216, 678, 687, 1068
BlnI	CCTAGG	1 cut(s)	1009
BlpI	GCTNAGC	1 cut(s)	208
BlsI	GCNGC	5 cut(s)	214, 217, 679, 688, 1069
Bme1390I	CCNGG	6 cut(s)	140, 354, 571, 859, 940, 1620
Bme18I	GGWCC	2 cut(s)	319, 1369
BmeT110I	CYCGRG	1 cut(s)	1401
BmgT120I	GGNCC	2 cut(s)	319, 1369
BmrFI	CCNGG	6 cut(s)	140, 354, 571, 859, 940, 1620
BmrI	ACTGGG	2 cut(s)	750, 1137
BmsI	GCATC	3 cut(s)	403, 612, 1128
BmuI	ACTGGG	2 cut(s)	750, 1137
BplI	GAGNNNNNCTC	2 cut(s)	8, 40
Bpu10I	CCTNAGC	1 cut(s)	1203
Bpu1102I	GCTNAGC	1 cut(s)	208
BpuEI	CTTGAG	1 cut(s)	1340
BpuMI	CCSGG	2 cut(s)	571, 940
Bsa29I	ATCGAT	1 cut(s)	1732
BsaBI	GATNNNNATC	1 cut(s)	1728
BsaJI	CCNNGG	2 cut(s)	353, 1009
BsaWI	WCCGGW	1 cut(s)	341
Bsc4I	CCNNNNNNNGG	1 cut(s)	492
Bse1I	ACTGG	2 cut(s)	745, 1143
Bse8I	GATNNNNATC	1 cut(s)	1728
BseBI	CCWGG	4 cut(s)	140, 354, 859, 1620
BseCI	ATCGAT	1 cut(s)	1732
BseDI	CCNNGG	2 cut(s)	353, 1009
BseGI	GGATG	7 cut(s)	418, 624, 760, 895, 1143, 1494, 1756
BseJI	GATNNNNATC	1 cut(s)	1728
BseLI	CCNNNNNNNGG	1 cut(s)	492
BseMII	CTCAG	4 cut(s)	432, 993, 1194, 1202
BseNI	ACTGG	2 cut(s)	745, 1143
BseRI	GAGGAG	2 cut(s)	1556, 1559
BseSI	GKGCMC	1 cut(s)	1078
BseXI	GCAGC	4 cut(s)	227, 664, 698, 1079
BshFI	GGCC	5 cut(s)	138, 311, 592, 1252, 1410
BshVI	ATCGAT	1 cut(s)	1732
BsiHKAI	GWGCWC	1 cut(s)	301
BsiHKCI	CYCGRG	1 cut(s)	1401
BsiSI	CCGG	3 cut(s)	342, 570, 939
BslFI	GGGAC	1 cut(s)	921
BslI	CCNNNNNNNGG	1 cut(s)	492
BsmAI	GTCTC	4 cut(s)	11, 343, 622, 1772
BsmBI	CGTCTC	2 cut(s)	11, 622
BsmFI	GGGAC	1 cut(s)	921
BsmI	GAATGC	2 cut(s)	985, 1595
BsnI	GGCC	5 cut(s)	138, 311, 592, 1252, 1410
BsoBI	CYCGRG	1 cut(s)	1401
Bsp1286I	GDGCHC	2 cut(s)	301, 1078
Bsp143I	GATC	5 cut(s)	21, 304, 498, 991, 1255
Bsp1720I	GCTNAGC	1 cut(s)	208
BspACI	CCGC	4 cut(s)	61, 205, 213, 1367
BspANI	GGCC	5 cut(s)	138, 311, 592, 1252, 1410
BspCNI	CTCAG	4 cut(s)	433, 994, 1195, 1201
BspDI	ATCGAT	1 cut(s)	1732
BspMI	ACCTGC	1 cut(s)	1009
BspQI	GCTCTTC	1 cut(s)	1218
BsrBI	CCGCTC	1 cut(s)	63
BsrI	ACTGG	2 cut(s)	745, 1143
BssECI	CCNNGG	2 cut(s)	353, 1009
BssMI	GATC	5 cut(s)	21, 304, 498, 991, 1255
BssT1I	CCWWGG	1 cut(s)	1009
Bst2UI	CCWGG	4 cut(s)	140, 354, 859, 1620
Bst4CI	ACNGT	6 cut(s)	96, 296, 374, 519, 661, 1577
Bst6I	CTCTTC	1 cut(s)	1218
BstAPI	GCANNNNNTGC	1 cut(s)	1073
BstC8I	GCNNGC	4 cut(s)	1016, 1381, 1408, 1587
BstDEI	CTNAG	6 cut(s)	208, 441, 1002, 1188, 1203, 1482
BstF5I	GGATG	7 cut(s)	418, 624, 760, 895, 1143, 1494, 1756
BstKTI	GATC	5 cut(s)	24, 307, 501, 994, 1258
BstMAI	GTCTC	4 cut(s)	11, 343, 622, 1772
BstMBI	GATC	5 cut(s)	21, 304, 498, 991, 1255
BstNI	CCWGG	4 cut(s)	140, 354, 859, 1620
BstNSI	RCATGY	2 cut(s)	1383, 1659
BstSCI	CCNGG	6 cut(s)	138, 352, 569, 857, 938, 1618
BstSLI	GKGCMC	1 cut(s)	1078
BstV1I	GCAGC	4 cut(s)	227, 664, 698, 1079
Bsu15I	ATCGAT	1 cut(s)	1732
BsuI	GTATCC	1 cut(s)	1022
BsuRI	GGCC	5 cut(s)	138, 311, 592, 1252, 1410
BsuTUI	ATCGAT	1 cut(s)	1732
BtgZI	GCGATG	2 cut(s)	575, 881
BtsCI	GGATG	7 cut(s)	418, 624, 760, 895, 1143, 1494, 1756
BtsI	GCAGTG	1 cut(s)	1107
BtsIMutI	CAGTG	3 cut(s)	657, 1107, 1582
BveI	ACCTGC	1 cut(s)	1009
Cac8I	GCNNGC	4 cut(s)	1016, 1381, 1408, 1587
Cfr13I	GGNCC	2 cut(s)	319, 1369
ClaI	ATCGAT	1 cut(s)	1732
Csp6I	GTAC	5 cut(s)	388, 574, 1022, 1290, 1570
CviQI	GTAC	5 cut(s)	388, 574, 1022, 1290, 1570
DdeI	CTNAG	6 cut(s)	208, 441, 1002, 1188, 1203, 1482
DpnI	GATC	5 cut(s)	23, 306, 500, 993, 1257
DpnII	GATC	5 cut(s)	21, 304, 498, 991, 1255
EaeI	YGGCCR	1 cut(s)	1408
Eam1104I	CTCTTC	1 cut(s)	1218
EarI	CTCTTC	1 cut(s)	1218
Eco130I	CCWWGG	1 cut(s)	1009
Eco147I	AGGCCT	1 cut(s)	592
Eco47I	GGWCC	2 cut(s)	319, 1369
Eco57I	CTGAAG	2 cut(s)	666, 1199
Eco88I	CYCGRG	1 cut(s)	1401
EcoRII	CCWGG	4 cut(s)	138, 352, 857, 1618
EcoT14I	CCWWGG	1 cut(s)	1009
EcoT22I	ATGCAT	1 cut(s)	1381
ErhI	CCWWGG	1 cut(s)	1009
Esp3I	CGTCTC	2 cut(s)	11, 622
FaqI	GGGAC	1 cut(s)	921
FauI	CCCGC	1 cut(s)	68
FauNDI	CATATG	1 cut(s)	1086
FbaI	TGATCA	3 cut(s)	304, 991, 1255
Fnu4HI	GCNGC	5 cut(s)	213, 216, 678, 687, 1068
FokI	GGATG	7 cut(s)	425, 631, 767, 902, 1150, 1501, 1763
Fsp4HI	GCNGC	5 cut(s)	213, 216, 678, 687, 1068
FspBI	CTAG	4 cut(s)	510, 666, 816, 1010
GluI	GCNGC	5 cut(s)	213, 216, 678, 687, 1068
HaeIII	GGCC	5 cut(s)	138, 311, 592, 1252, 1410
HapII	CCGG	3 cut(s)	342, 570, 939
HincII	GTYRAC	1 cut(s)	99
HindII	GTYRAC	1 cut(s)	99
HindIII	AAGCTT	1 cut(s)	1583
HinfI	GANTC	9 cut(s)	336, 403, 718, 749, 841, 1047, 1226, 1724, 1734
HpaI	GTTAAC	1 cut(s)	99
HpaII	CCGG	3 cut(s)	342, 570, 939
HphI	GGTGA	2 cut(s)	515, 850
Hpy166II	GTNNAC	4 cut(s)	99, 657, 960, 1164
Hpy188I	TCNGA	5 cut(s)	696, 754, 781, 925, 1191
Hpy188III	TCNNGA	7 cut(s)	287, 302, 845, 1148, 1309, 1511, 1769
Hpy8I	GTNNAC	4 cut(s)	99, 657, 960, 1164
HpyAV	CCTTC	5 cut(s)	58, 415, 706, 892, 1493
HpyCH4III	ACNGT	6 cut(s)	96, 296, 374, 519, 661, 1577
HpyCH4IV	ACGT	2 cut(s)	576, 962
HpyCH4V	TGCA	9 cut(s)	195, 625, 968, 1067, 1379, 1531, 1589, 1595, 1676
HpyF3I	CTNAG	6 cut(s)	208, 441, 1002, 1188, 1203, 1482
HpySE526I	ACGT	2 cut(s)	576, 962
Ksp22I	TGATCA	3 cut(s)	304, 991, 1255
KspAI	GTTAAC	1 cut(s)	99
Kzo9I	GATC	5 cut(s)	21, 304, 498, 991, 1255
LguI	GCTCTTC	1 cut(s)	1218
LmnI	GCTCC	1 cut(s)	1546
Lsp1109I	GCAGC	4 cut(s)	227, 664, 698, 1079
LweI	GCATC	3 cut(s)	403, 612, 1128
MaeI	CTAG	4 cut(s)	510, 666, 816, 1010
MaeII	ACGT	2 cut(s)	576, 962
MaeIII	GTNAC	6 cut(s)	225, 368, 853, 1227, 1243, 1261
MalI	GATC	5 cut(s)	23, 306, 500, 993, 1257
MbiI	CCGCTC	1 cut(s)	63
MboI	GATC	5 cut(s)	21, 304, 498, 991, 1255
MboII	GAAGA	7 cut(s)	63, 106, 508, 907, 1205, 1430, 1508
MhlI	GDGCHC	2 cut(s)	301, 1078
MluCI	AATT	8 cut(s)	5, 167, 314, 544, 1476, 1645, 1677, 1682
MlyI	GAGTC	4 cut(s)	345, 412, 743, 1235
MmeI	TCCRAC	3 cut(s)	726, 759, 1159
Mph1103I	ATGCAT	1 cut(s)	1381
MroXI	GAANNNNTTC	1 cut(s)	1212
MseI	TTAA	8 cut(s)	86, 98, 1236, 1338, 1355, 1641, 1649, 1680
MspI	CCGG	3 cut(s)	342, 570, 939
MspR9I	CCNGG	6 cut(s)	140, 354, 571, 859, 940, 1620
Mva1269I	GAATGC	2 cut(s)	985, 1595
MvaI	CCWGG	4 cut(s)	140, 354, 859, 1620
NciI	CCSGG	2 cut(s)	571, 940
NdeI	CATATG	1 cut(s)	1086
NdeII	GATC	5 cut(s)	21, 304, 498, 991, 1255
NmeAIII	GCCGAG	2 cut(s)	1228, 1450
NmuCI	GTSAC	2 cut(s)	853, 1227
NsiI	ATGCAT	1 cut(s)	1381
NspI	RCATGY	2 cut(s)	1383, 1659
PaeI	GCATGC	1 cut(s)	1383
PceI	AGGCCT	1 cut(s)	592
PciI	ACATGT	1 cut(s)	1655
PciSI	GCTCTTC	1 cut(s)	1218
PcsI	WCGNNNNNNNCGW	1 cut(s)	582
PctI	GAATGC	2 cut(s)	985, 1595
PdmI	GAANNNNTTC	1 cut(s)	1212
PfeI	GAWTC	5 cut(s)	718, 841, 1047, 1724, 1734
PfoI	TCCNGGA	1 cut(s)	938
PkrI	GCNGC	5 cut(s)	214, 217, 679, 688, 1069
PleI	GAGTC	4 cut(s)	344, 411, 743, 1234
PpsI	GAGTC	4 cut(s)	344, 411, 743, 1234
PscI	ACATGT	1 cut(s)	1655
PsiI	TTATAA	1 cut(s)	1436
Psp6I	CCWGG	4 cut(s)	138, 352, 857, 1618
PspGI	CCWGG	4 cut(s)	138, 352, 857, 1618
PspPI	GGNCC	2 cut(s)	319, 1369
PsrI	GAACNNNNNNTAC	2 cut(s)	1553, 1585
RsaI	GTAC	5 cut(s)	389, 575, 1023, 1291, 1571
RsaNI	GTAC	5 cut(s)	388, 574, 1022, 1290, 1570
SapI	GCTCTTC	1 cut(s)	1218
SaqAI	TTAA	8 cut(s)	86, 98, 1236, 1338, 1355, 1641, 1649, 1680
SatI	GCNGC	5 cut(s)	213, 216, 678, 687, 1068
Sau3AI	GATC	5 cut(s)	21, 304, 498, 991, 1255
Sau96I	GGNCC	2 cut(s)	319, 1369
SchI	GAGTC	4 cut(s)	345, 412, 743, 1235
ScrFI	CCNGG	6 cut(s)	140, 354, 571, 859, 940, 1620
SduI	GDGCHC	2 cut(s)	301, 1078
SfaNI	GCATC	3 cut(s)	403, 612, 1128
SinI	GGWCC	2 cut(s)	319, 1369
SmlI	CTYRAG	1 cut(s)	1319
SmoI	CTYRAG	1 cut(s)	1319
SphI	GCATGC	1 cut(s)	1383
Sse9I	AATT	8 cut(s)	5, 167, 314, 544, 1476, 1645, 1677, 1682
SseBI	AGGCCT	1 cut(s)	592
SsiI	CCGC	4 cut(s)	61, 205, 213, 1367
SspI	AATATT	1 cut(s)	1432
SspMI	CTAG	4 cut(s)	510, 666, 816, 1010
StuI	AGGCCT	1 cut(s)	592
StyD4I	CCNGG	6 cut(s)	138, 352, 569, 857, 938, 1618
StyI	CCWWGG	1 cut(s)	1009
TaaI	ACNGT	6 cut(s)	96, 296, 374, 519, 661, 1577
TaiI	ACGT	2 cut(s)	579, 965
TaqI	TCGA	7 cut(s)	266, 348, 844, 1050, 1308, 1732, 1770
TasI	AATT	8 cut(s)	5, 167, 314, 544, 1476, 1645, 1677, 1682
TatI	WGTACW	1 cut(s)	1289
TauI	GCSGC	1 cut(s)	215
TfiI	GAWTC	5 cut(s)	718, 841, 1047, 1724, 1734
Tru1I	TTAA	8 cut(s)	86, 98, 1236, 1338, 1355, 1641, 1649, 1680
Tru9I	TTAA	8 cut(s)	86, 98, 1236, 1338, 1355, 1641, 1649, 1680
TscAI	CASTG	3 cut(s)	664, 1114, 1582
TseFI	GTSAC	2 cut(s)	853, 1227
TseI	GCWGC	4 cut(s)	215, 677, 686, 1067
Tsp45I	GTSAC	2 cut(s)	853, 1227
TspGWI	ACGGA	1 cut(s)	1054
TspRI	CASTG	3 cut(s)	664, 1114, 1582
VpaK11BI	GGWCC	2 cut(s)	319, 1369
XapI	RAATTY	4 cut(s)	167, 1476, 1645, 1682
XceI	RCATGY	2 cut(s)	1383, 1659
XcmI	CCANNNNNNNNNTGG	2 cut(s)	136, 1150
XmaJI	CCTAGG	1 cut(s)	1009
XmnI	GAANNNNTTC	1 cut(s)	1212
XspI	CTAG	4 cut(s)	510, 666, 816, 1010
Zsp2I	ATGCAT	1 cut(s)	1381

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.