Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0016202

Physical Location & Seq

Genomic Coordinates Reverse (-)

15534897 .. 15536412

Gene Structure 1516 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47837

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGATTTCCGGGTACGTTCGGCACCAAAGGCCTAATGAGTATTTGGAGTTGTATAGGATGATGCAGAGGCGAGAGAGTTCAAAGTCTAATAAGTTCACTGTGTCTAGCGTTCTTGCTGCTTCAGCGGCCATTCAGAGTCTGAGAATGGGGAGGGAGATTCATGGTTATATAACGCGAACTGGGTTGGACTCGGATGAGGTGGTTTGGAGTGCCTTGTCGGATATGTATGGGAAATGTGGGAGTATAGAGGAAGCTAGGTGTGTTTTTGATAAGATGGTGAATCGAGAAGTTGTGACATGGACGGCGATGATTGGGAGATACTTTGAGGATGGGAAGAAGGACGAGGGACTTGCCTTGTTTTCGGAGTTGATGAAATCCGGGATTAGACCAAATGAGTTCACGTTTGCAGGGGTTTTGAATGCCTGTGCTGATCATGCTACTGAGAACCTAGGCAAGCAGGTACATGGATACATGACACGGATAGGATTCGACCCCTTTTCATTTGCAGCAAGTGCCCTTGTTCATATGTATTCCAAGTGTGGAAACACTGCTAATGCGAATAAGGTGTTTAAAGGGATGCCTAGTCCAGATTTGGTTTCATGGACTTCCCTTATTGTTGGATATGCTCGGAATGGTCAAGCTGACGAAGCTCTTCAGTTGTTTGAGTCACTACTTAAATCAGGTACTAGGCCTGATCACGTAACATTTGTAGGTGTTCTTTCAGCTTGTACTCATGCTGGATTAGTCGATAGAGGACTTGAGTATTTCCATTCTATTAAGGTAAAACATGGGTTAAAACATACTGCGGACCATTATACATGTGTAGTTGATCTGTTAGCCCGAGCTGGCCGATTTGAAGAAGCCGGGAATATTATAAGTGAAATGGCCATGAAGCCTAGTAAGTTCTCCTGGGCCTCCTTAATTGGTGGTGGTAGAATTCATGGAAACGTCGAGCTGGCAAAGCGAGCTGTAGAGGCATTGTTTGAGATAGAACCTGAGAATCCTGCTAGTTATGTTACTCTGGCCAACATTTACGCTACCACTGGAATGTGGAGTACAGTAACAATGGTTAGAAAAAAAATGGATGAAAGTGGGATAATAAAGAAACCAGGTCTGAGTTGGATTGAGATCAAGAGAGAGATGCATGTTTTCTTAGTTGGGGAACAGTCTCACCCCAGATACAATGAAATAGATCACTTTTTGAGTGAAATTTCGAAGAGGATGAAAGAAGAAGGGTATGTTCCTGACACGAACTTTGTGCTGCATGATGTTGAGGAGGAGCAGAAAGAGCAGAACCTCTTGTACCACAGTGAGAAGCTTGCAGTTGCATTCGGCATTGTTTCTACTCCACCAGGAACTGCAATCAAGGTTTTTAAGAATTTAAGAACATGTGTAGATTGTCATAATGCAATTAAATTTATTTCCAAGATTTCTAACAGAAATATAATAGTGCGGGATTCAAATCGATTCCATTGTTTTGAGGATGGGAAGTGTTCATGTCTCGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

504

Amino Acids

56.61

Weight (kDa)

7.29

Isoelectric Point (pI)

37.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	96 - 143	5.6e-11	PPR repeat family
PPR_long	PF17177	116 - 260	3.4e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	195 - 222	9.6e-06	PPR repeat
PPR_2	PF13041	196 - 243	4e-11	PPR repeat family
PPR	PF01535	199 - 228	2e-07	PPR repeat
E_motif	PF20431	314 - 376	1.7e-21	E motif
DYW_deaminase	PF14432	412 - 504	3.6e-41	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37170
fragaria_vesca	FvH4_1g15050 FvH4_1g15080
malus_domestica	MD15G1276800.v1.1
prunus_persica	Prupe.7G139900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0104091 RchiOBHm_Chr2g0104101
rosa_laevigata	RLG00000017288 RLG00000017299
rosa_multiflora	Rmu_ssc0000257.1_g000009
rosa_rugosa	Rorug02G0119400
rosa_samantha	Rh2BG176100 Rh2CG174500 Rh2CG174700
rosa_wichuraiana	Rw2G013220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	875
Acc36I	ACCTGC	1 cut(s)	448
AccB1I	GGYRCC	1 cut(s)	21
AccII	CGCG	1 cut(s)	175
AciI	CCGC	3 cut(s)	125, 806, 1453
AcoI	YGGCCR	4 cut(s)	126, 847, 885, 1023
AcsI	RAATTY	4 cut(s)	936, 1209, 1378, 1415
AcuI	CTGAAG	2 cut(s)	105, 638
AfaI	GTAC	6 cut(s)	14, 462, 685, 730, 1057, 1304
AflIII	ACRYGT	2 cut(s)	818, 1388
AgsI	TTSAA	4 cut(s)	81, 418, 857, 1461
AjnI	CCWGG	3 cut(s)	908, 1108, 1351
AluBI	AGCT	8 cut(s)	254, 641, 650, 725, 845, 955, 968, 1318
AluI	AGCT	8 cut(s)	254, 641, 650, 725, 845, 955, 968, 1318
Alw26I	GTCTC	2 cut(s)	1173, 1505
AlwNI	CAGNNNCTG	2 cut(s)	139, 1358
Ama87I	CYCGRG	1 cut(s)	840
AoxI	GGCC	7 cut(s)	29, 126, 689, 847, 885, 912, 1023
ApeKI	GCWGC	3 cut(s)	116, 506, 1261
ApoI	RAATTY	4 cut(s)	936, 1209, 1378, 1415
ArsI	GACNNNNNNTTYG	2 cut(s)	1238, 1270
Asp700I	GAANNNNTTC	1 cut(s)	651
AspA2I	CCTAGG	1 cut(s)	448
AspS9I	GGNCC	2 cut(s)	808, 912
AsuC2I	CCSGG	3 cut(s)	10, 379, 865
AsuHPI	GGTGA	2 cut(s)	289, 1163
AsuII	TTCGAA	1 cut(s)	1214
AvaI	CYCGRG	1 cut(s)	840
AvaII	GGWCC	1 cut(s)	808
AvrII	CCTAGG	1 cut(s)	448
BaeGI	GKGCMC	1 cut(s)	517
BalI	TGGCCA	2 cut(s)	887, 1025
BanI	GGYRCC	1 cut(s)	21
BbvI	GCAGC	3 cut(s)	103, 518, 1248
BccI	CCATC	3 cut(s)	268, 323, 1478
BceAI	ACGGC	1 cut(s)	318
BcgI	CGANNNNNNTGC	4 cut(s)	332, 366, 1240, 1274
BciT130I	CCWGG	3 cut(s)	910, 1110, 1353
BciVI	GTATCC	1 cut(s)	461
BclI	TGATCA	2 cut(s)	430, 694
BcnI	CCSGG	3 cut(s)	10, 379, 865
BcoDI	GTCTC	2 cut(s)	1173, 1505
BfaI	CTAG	7 cut(s)	105, 255, 449, 582, 687, 897, 1008
BfmI	CTRYAG	1 cut(s)	969
BfuAI	ACCTGC	1 cut(s)	448
BfuI	GTATCC	1 cut(s)	461
BisI	GCNGC	4 cut(s)	117, 126, 507, 1262
BlnI	CCTAGG	1 cut(s)	448
BlsI	GCNGC	4 cut(s)	118, 127, 508, 1263
Bme1390I	CCNGG	6 cut(s)	10, 379, 865, 910, 1110, 1353
Bme18I	GGWCC	1 cut(s)	808
BmeT110I	CYCGRG	1 cut(s)	840
BmgT120I	GGNCC	2 cut(s)	808, 912
BmiI	GGNNCC	1 cut(s)	23
BmrFI	CCNGG	6 cut(s)	10, 379, 865, 910, 1110, 1353
BmrI	ACTGGG	1 cut(s)	189
BmsI	GCATC	3 cut(s)	51, 567, 1131
BmuI	ACTGGG	1 cut(s)	189
Bpu14I	TTCGAA	1 cut(s)	1214
BpuEI	CTTGAG	1 cut(s)	779
BpuMI	CCSGG	3 cut(s)	10, 379, 865
Bsa29I	ATCGAT	1 cut(s)	1465
BsaAI	YACGTR	1 cut(s)	700
BsaBI	GATNNNNATC	2 cut(s)	1127, 1461
BsaJI	CCNNGG	2 cut(s)	448, 909
Bse1I	ACTGG	2 cut(s)	184, 1048
Bse8I	GATNNNNATC	2 cut(s)	1127, 1461
BseBI	CCWGG	3 cut(s)	910, 1110, 1353
BseCI	ATCGAT	1 cut(s)	1465
BseDI	CCNNGG	2 cut(s)	448, 909
BseGI	GGATG	7 cut(s)	63, 199, 334, 582, 1090, 1227, 1489
BseJI	GATNNNNATC	2 cut(s)	1127, 1461
BseMII	CTCAG	4 cut(s)	131, 432, 987, 1106
BseNI	ACTGG	2 cut(s)	184, 1048
BseRI	GAGGAG	2 cut(s)	1289, 1292
BseSI	GKGCMC	1 cut(s)	517
BseXI	GCAGC	3 cut(s)	103, 518, 1248
Bsh1236I	CGCG	1 cut(s)	175
BshFI	GGCC	7 cut(s)	31, 128, 691, 849, 887, 914, 1025
BshNI	GGYRCC	1 cut(s)	21
BshVI	ATCGAT	1 cut(s)	1465
BsiHKCI	CYCGRG	1 cut(s)	840
BsiSI	CCGG	3 cut(s)	9, 378, 864
BslFI	GGGAC	1 cut(s)	360
BsmAI	GTCTC	2 cut(s)	1173, 1505
BsmFI	GGGAC	1 cut(s)	360
BsmI	GAATGC	2 cut(s)	424, 1328
BsnI	GGCC	7 cut(s)	31, 128, 691, 849, 887, 914, 1025
BsoBI	CYCGRG	1 cut(s)	840
Bsp119I	TTCGAA	1 cut(s)	1214
Bsp1286I	GDGCHC	1 cut(s)	517
Bsp143I	GATC	5 cut(s)	430, 694, 829, 1128, 1192
BspACI	CCGC	3 cut(s)	125, 806, 1453
BspANI	GGCC	7 cut(s)	31, 128, 691, 849, 887, 914, 1025
BspCNI	CTCAG	4 cut(s)	132, 433, 988, 1107
BspDI	ATCGAT	1 cut(s)	1465
BspFNI	CGCG	1 cut(s)	175
BspLI	GGNNCC	1 cut(s)	23
BspMI	ACCTGC	1 cut(s)	448
BspQI	GCTCTTC	1 cut(s)	657
BspT104I	TTCGAA	1 cut(s)	1214
BspT107I	GGYRCC	1 cut(s)	21
BsrI	ACTGG	2 cut(s)	184, 1048
BssECI	CCNNGG	2 cut(s)	448, 909
BssMI	GATC	5 cut(s)	430, 694, 829, 1128, 1192
BssT1I	CCWWGG	1 cut(s)	448
Bst2UI	CCWGG	3 cut(s)	910, 1110, 1353
Bst4CI	ACNGT	4 cut(s)	100, 1060, 1167, 1310
Bst6I	CTCTTC	2 cut(s)	657, 1211
BstAPI	GCANNNNNTGC	1 cut(s)	512
BstBAI	YACGTR	1 cut(s)	700
BstBI	TTCGAA	1 cut(s)	1214
BstC8I	GCNNGC	5 cut(s)	455, 847, 957, 966, 1320
BstDEI	CTNAG	5 cut(s)	140, 441, 996, 1115, 1153
BstF5I	GGATG	7 cut(s)	63, 199, 334, 582, 1090, 1227, 1489
BstFNI	CGCG	1 cut(s)	175
BstKTI	GATC	5 cut(s)	433, 697, 832, 1131, 1195
BstMAI	GTCTC	2 cut(s)	1173, 1505
BstMBI	GATC	5 cut(s)	430, 694, 829, 1128, 1192
BstNI	CCWGG	3 cut(s)	910, 1110, 1353
BstNSI	RCATGY	3 cut(s)	822, 1148, 1392
BstSCI	CCNGG	6 cut(s)	8, 377, 863, 908, 1108, 1351
BstSFI	CTRYAG	1 cut(s)	969
BstSLI	GKGCMC	1 cut(s)	517
BstUI	CGCG	1 cut(s)	175
BstV1I	GCAGC	3 cut(s)	103, 518, 1248
Bsu15I	ATCGAT	1 cut(s)	1465
BsuI	GTATCC	1 cut(s)	461
BsuRI	GGCC	7 cut(s)	31, 128, 691, 849, 887, 914, 1025
BsuTUI	ATCGAT	1 cut(s)	1465
BtgZI	GCGATG	1 cut(s)	320
BtsCI	GGATG	7 cut(s)	63, 199, 334, 582, 1090, 1227, 1489
BtsI	GCAGTG	1 cut(s)	546
BtsIMutI	CAGTG	4 cut(s)	96, 546, 1041, 1315
BveI	ACCTGC	1 cut(s)	448
Cac8I	GCNNGC	5 cut(s)	455, 847, 957, 966, 1320
CaiI	CAGNNNCTG	2 cut(s)	139, 1358
Cfr13I	GGNCC	2 cut(s)	808, 912
ClaI	ATCGAT	1 cut(s)	1465
CsiI	ACCWGGT	1 cut(s)	1108
Csp6I	GTAC	6 cut(s)	13, 461, 684, 729, 1056, 1303
CviQI	GTAC	6 cut(s)	13, 461, 684, 729, 1056, 1303
DdeI	CTNAG	5 cut(s)	140, 441, 996, 1115, 1153
DpnI	GATC	5 cut(s)	432, 696, 831, 1130, 1194
DpnII	GATC	5 cut(s)	430, 694, 829, 1128, 1192
DraI	TTTAAA	1 cut(s)	571
EaeI	YGGCCR	4 cut(s)	126, 847, 885, 1023
Eam1104I	CTCTTC	2 cut(s)	657, 1211
EarI	CTCTTC	2 cut(s)	657, 1211
Eco130I	CCWWGG	1 cut(s)	448
Eco147I	AGGCCT	2 cut(s)	31, 691
Eco47I	GGWCC	1 cut(s)	808
Eco57I	CTGAAG	2 cut(s)	105, 638
Eco88I	CYCGRG	1 cut(s)	840
EcoRI	GAATTC	1 cut(s)	936
EcoRII	CCWGG	3 cut(s)	908, 1108, 1351
EcoT14I	CCWWGG	1 cut(s)	448
EcoT22I	ATGCAT	1 cut(s)	1146
ErhI	CCWWGG	1 cut(s)	448
FaqI	GGGAC	1 cut(s)	360
FauI	CCCGC	1 cut(s)	1446
FauNDI	CATATG	1 cut(s)	525
FbaI	TGATCA	2 cut(s)	430, 694
Fnu4HI	GCNGC	4 cut(s)	117, 126, 507, 1262
FokI	GGATG	7 cut(s)	70, 206, 341, 589, 1097, 1234, 1496
Fsp4HI	GCNGC	4 cut(s)	117, 126, 507, 1262
FspBI	CTAG	7 cut(s)	105, 255, 449, 582, 687, 897, 1008
GluI	GCNGC	4 cut(s)	117, 126, 507, 1262
HaeIII	GGCC	7 cut(s)	31, 128, 691, 849, 887, 914, 1025
HapII	CCGG	3 cut(s)	9, 378, 864
HindIII	AAGCTT	1 cut(s)	1316
HinfI	GANTC	9 cut(s)	136, 157, 188, 280, 486, 665, 1000, 1457, 1467
HpaII	CCGG	3 cut(s)	9, 378, 864
HphI	GGTGA	2 cut(s)	289, 1163
Hpy166II	GTNNAC	2 cut(s)	96, 399
Hpy188I	TCNGA	7 cut(s)	135, 141, 193, 220, 364, 630, 1116
Hpy188III	TCNNGA	5 cut(s)	284, 587, 1132, 1244, 1502
Hpy8I	GTNNAC	2 cut(s)	96, 399
Hpy99I	CGWCG	1 cut(s)	953
HpyAV	CCTTC	2 cut(s)	331, 1226
HpyCH4III	ACNGT	4 cut(s)	100, 1060, 1167, 1310
HpyCH4IV	ACGT	4 cut(s)	15, 401, 699, 948
HpyCH4V	TGCA	9 cut(s)	64, 407, 506, 1144, 1264, 1322, 1328, 1361, 1409
HpyF3I	CTNAG	5 cut(s)	140, 441, 996, 1115, 1153
HpySE526I	ACGT	4 cut(s)	15, 401, 699, 948
Ksp22I	TGATCA	2 cut(s)	430, 694
Kzo9I	GATC	5 cut(s)	430, 694, 829, 1128, 1192
LguI	GCTCTTC	1 cut(s)	657
LmnI	GCTCC	1 cut(s)	1279
Lsp1109I	GCAGC	3 cut(s)	103, 518, 1248
LweI	GCATC	3 cut(s)	51, 567, 1131
MabI	ACCWGGT	1 cut(s)	1108
MaeI	CTAG	7 cut(s)	105, 255, 449, 582, 687, 897, 1008
MaeII	ACGT	4 cut(s)	15, 401, 699, 948
MaeIII	GTNAC	5 cut(s)	292, 666, 700, 1015, 1060
MalI	GATC	5 cut(s)	432, 696, 831, 1130, 1194
MboI	GATC	5 cut(s)	430, 694, 829, 1128, 1192
MboII	GAAGA	5 cut(s)	346, 644, 869, 1228, 1241
MhlI	GDGCHC	1 cut(s)	517
MlsI	TGGCCA	2 cut(s)	887, 1025
MluCI	AATT	6 cut(s)	921, 936, 1209, 1378, 1410, 1415
MluNI	TGGCCA	2 cut(s)	887, 1025
MlyI	GAGTC	3 cut(s)	145, 182, 674
MmeI	TCCRAC	4 cut(s)	165, 198, 598, 1100
Mox20I	TGGCCA	2 cut(s)	887, 1025
Mph1103I	ATGCAT	1 cut(s)	1146
MroXI	GAANNNNTTC	1 cut(s)	651
MscI	TGGCCA	2 cut(s)	887, 1025
MseI	TTAA	8 cut(s)	570, 675, 777, 794, 920, 1374, 1382, 1413
MslI	CAYNNNNRTG	1 cut(s)	1046
Msp20I	TGGCCA	2 cut(s)	887, 1025
MspA1I	CMGCKG	1 cut(s)	125
MspI	CCGG	3 cut(s)	9, 378, 864
MspR9I	CCNGG	6 cut(s)	10, 379, 865, 910, 1110, 1353
Mva1269I	GAATGC	2 cut(s)	424, 1328
MvaI	CCWGG	3 cut(s)	910, 1110, 1353
MvnI	CGCG	1 cut(s)	175
NciI	CCSGG	3 cut(s)	10, 379, 865
NdeI	CATATG	1 cut(s)	525
NdeII	GATC	5 cut(s)	430, 694, 829, 1128, 1192
NlaIV	GGNNCC	1 cut(s)	23
NmuCI	GTSAC	2 cut(s)	292, 666
NsiI	ATGCAT	1 cut(s)	1146
NspI	RCATGY	3 cut(s)	822, 1148, 1392
NspV	TTCGAA	1 cut(s)	1214
PceI	AGGCCT	2 cut(s)	31, 691
PciI	ACATGT	2 cut(s)	818, 1388
PciSI	GCTCTTC	1 cut(s)	657
PctI	GAATGC	2 cut(s)	424, 1328
PdmI	GAANNNNTTC	1 cut(s)	651
PfeI	GAWTC	6 cut(s)	157, 280, 486, 1000, 1457, 1467
PfoI	TCCNGGA	1 cut(s)	377
PkrI	GCNGC	4 cut(s)	118, 127, 508, 1263
PleI	GAGTC	3 cut(s)	144, 182, 673
PpsI	GAGTC	3 cut(s)	144, 182, 673
Ppu21I	YACGTR	1 cut(s)	700
PscI	ACATGT	2 cut(s)	818, 1388
PsiI	TTATAA	1 cut(s)	875
Psp6I	CCWGG	3 cut(s)	908, 1108, 1351
PspGI	CCWGG	3 cut(s)	908, 1108, 1351
PspN4I	GGNNCC	1 cut(s)	23
PspPI	GGNCC	2 cut(s)	808, 912
PsrI	GAACNNNNNNTAC	2 cut(s)	1286, 1318
PstNI	CAGNNNCTG	2 cut(s)	139, 1358
RsaI	GTAC	6 cut(s)	14, 462, 685, 730, 1057, 1304
RsaNI	GTAC	6 cut(s)	13, 461, 684, 729, 1056, 1303
RseI	CAYNNNNRTG	1 cut(s)	1046
SapI	GCTCTTC	1 cut(s)	657
SaqAI	TTAA	8 cut(s)	570, 675, 777, 794, 920, 1374, 1382, 1413
SatI	GCNGC	4 cut(s)	117, 126, 507, 1262
Sau3AI	GATC	5 cut(s)	430, 694, 829, 1128, 1192
Sau96I	GGNCC	2 cut(s)	808, 912
SchI	GAGTC	3 cut(s)	145, 182, 674
ScrFI	CCNGG	6 cut(s)	10, 379, 865, 910, 1110, 1353
SduI	GDGCHC	1 cut(s)	517
SexAI	ACCWGGT	1 cut(s)	1108
SfaNI	GCATC	3 cut(s)	51, 567, 1131
SfcI	CTRYAG	1 cut(s)	969
SfuI	TTCGAA	1 cut(s)	1214
SinI	GGWCC	1 cut(s)	808
SmiMI	CAYNNNNRTG	1 cut(s)	1046
SmlI	CTYRAG	1 cut(s)	758
SmoI	CTYRAG	1 cut(s)	758
Sse9I	AATT	6 cut(s)	921, 936, 1209, 1378, 1410, 1415
SseBI	AGGCCT	2 cut(s)	31, 691
SsiI	CCGC	3 cut(s)	125, 806, 1453
SspI	AATATT	1 cut(s)	871
SspMI	CTAG	7 cut(s)	105, 255, 449, 582, 687, 897, 1008
StuI	AGGCCT	2 cut(s)	31, 691
StyD4I	CCNGG	6 cut(s)	8, 377, 863, 908, 1108, 1351
StyI	CCWWGG	1 cut(s)	448
TaaI	ACNGT	4 cut(s)	100, 1060, 1167, 1310
TaiI	ACGT	4 cut(s)	18, 404, 702, 951
TaqI	TCGA	7 cut(s)	283, 489, 747, 951, 1214, 1465, 1503
TasI	AATT	6 cut(s)	921, 936, 1209, 1378, 1410, 1415
TatI	WGTACW	2 cut(s)	728, 1055
TauI	GCSGC	1 cut(s)	128
TfiI	GAWTC	6 cut(s)	157, 280, 486, 1000, 1457, 1467
Tru1I	TTAA	8 cut(s)	570, 675, 777, 794, 920, 1374, 1382, 1413
Tru9I	TTAA	8 cut(s)	570, 675, 777, 794, 920, 1374, 1382, 1413
TscAI	CASTG	4 cut(s)	103, 553, 1048, 1315
TseFI	GTSAC	2 cut(s)	292, 666
TseI	GCWGC	3 cut(s)	116, 506, 1261
Tsp45I	GTSAC	2 cut(s)	292, 666
TspGWI	ACGGA	1 cut(s)	493
TspRI	CASTG	4 cut(s)	103, 553, 1048, 1315
VpaK11BI	GGWCC	1 cut(s)	808
XapI	RAATTY	4 cut(s)	936, 1209, 1378, 1415
XceI	RCATGY	3 cut(s)	822, 1148, 1392
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1116
XmaJI	CCTAGG	1 cut(s)	448
XmnI	GAANNNNTTC	1 cut(s)	651
XspI	CTAG	7 cut(s)	105, 255, 449, 582, 687, 897, 1008
Zsp2I	ATGCAT	1 cut(s)	1146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.