FvH4_1g16340

Filament-like plant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0007037
Physical Location & Seq
Reverse (-)
9404137 .. 9410077
5941 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g16340.t4

Sequence Viewer

Length: 3153 bp
ATGGACAAGGCGTGGCTATGGAGGAAGAAATCCACAGAGAAGCTGCCCATTGTTGCTGACAAAGTCAACGGTTCATCAAGAGGAAATGAAGAAGAGATGGAGGCAATGCTTAATGAGAAGGCAGAGCTAGAGAAAGATCTGAAAGCTTTAAGTGATAAGCTGGCTTCTGCTCTCTCTGATTGTAAGAATAAAGATGAACTGGTGAAGAAACATGCCAACATGGCACAGGAAGCTGTTCACGGCTGGGAGAATTTAGAAGCTGAAGCAGGGTTTCTAAAGCAAGAATTGGATAAATCTTTGCAACTCAGAGACGCTGCTGAAGAAAGAATAGCTCAATTGGATGGAGCCCTCAAGGAGTGCATGCAGCAGCTACGATATGTTCGAGATGAACAAGAGCAAAGGGTTCATGATGCTGTGATGAAGACAACAAGGGAATTCGAGAAATCTCAGATGGTGTTGGAAGAGAAGCTAACAGAGACCAGTAAAAGGCTTTCTAAAATAGGTGCTGAAAATACCCATCTAAGTAAGGCTCTTTCAGTGAAGGAAAAGTTGACTGAAGATTTAAGAAGACAAATGAGTCAGATGGAAACAGATTTGAATGCACTTATGGCCAGAGTAGAGTCCAGAGAGAAAGATAATGCTTCTTTGACATATGAGGTTCGAGTGCTTGAGAAAGAGCTTGAGATCAGGAATGAGGAGAGAGAATTCAATCGTCGGACTGCTGATGCAGCACATAAGCAACATCTTGAGGGTGCAAAAAAAATCGCAAAGTTAGAATCAGAATGTCAGAGGTTGCGTGTCCTGGTCAGGAAGCGATTGCCAGGTCCTGCTGCCTTGGCTAAAATGAAAAATGAAGTTGAAATGCTTGGAAGGGATTCGGTTGACATGAGGAGGAGAAGTTTGAGCCCAAATGGTTTAAGGTATGACTCGACTGCTGACAAGTTTCCTGAGGCTCCCACTAAAAAGATCAATTTTCTAACTGAGCAGTTATGCGCTATGGAAGAAGAAAATGCGATTCTCAAGGAAGCACTCAATAAGAAGATGAATGAGTTACAGTTTTCCAAAAACATGTATAACCGTGCAGCCTCCAAATTATCACAAGTTGAAACAGCGGTCGGAGAATCCCCACGAGGCACTCTTATGCAACATGAACTCTCTGTAGCATCTATGTCTGATATTGGTAGCGATGATAAGGCTAGTTGTGCCGAATCATGGGCTTCTGCTTTGATTACAGAACTGGAGCATTTTAGAAATGAAAAGCAAAAAGGCTCGCCGACATGCAAAACTGTTGGAGCTTCAGACATAAATCTGATGGATGATTTTGTTGAAATGGAAAAACTAGCAGTGGTCTCTGCTGATAAAGTAAGTGTTGGTTCTTATGCTTCCTCACCAGCTAATACATTTGCTGGCCATTTTGAAAATCAGTTTTCCTTGGAACTAGGGGGTAGCGATGTAGTTCCTTTATCTGACAGCGAGTCAGGCTTCAGTTTGTCAAACAGGGAGTCCAACCGTATTCTGGATGGCAAAGCTCCTCATTGGCTCCAGGATATAGTGAAATTGGTGTTAGAGCACAGCCGTGTTGCACGAAGAAGCCCTGAACAAATACTAGAGGATATAAGAATGGCTTTGGCAACTACAACTAATCCTTCTTCTGCTAAAAGCTGCATCTCATGGAAAGACTCAAATCAGTGTGCAGTAACTGATTCACCCAATGGAGCAAGTGATGAGCAGTTACAACCAGATCTTAGGAAATCAATATGCAAAATAATTGAGCTTATCGAAGGAATCAGTGTGCCGTCTCCAGATTATAACACAGATGCCAGACACAAGAATTCAGAAACACAGGCAGGCTACATGGTTCGTGTTTTCCAATGGAAATCTTCTGAACTTGGGACTCTTCTACAACAATTTGTTCATGCTTGTTACAATCTATTAAATGGGAAGGCTGGCCTTGATAGATTTGCTGAAGAACTAACTACGGCCCTGGACTGGATTTTGAACCACTGCTTTTCACTTCAAGATGTTTCAAGCATGAAGGATGCAATTAAGAAGCAATTTGATTGGGATGATACACGAAGTGAAAGCGAAGCAGAAGTTGTTGGATTGGTTGGTCACTATTCAGATACAGATAAATTTCGAGTTCCCAGAGAACACACATCATTAAGGCCTATGGCTGCTTCTTCAAATGGTCATAGCAGCCAAATAGAAGAGCTGCAGTTCAATTTGGTCAAAGAAAACAGAAAGTTAAAGGACGATCTTGTGAATACAGAATCTGGCAAAAATGAGTTGGAAGGCAGACTTCAGTCAGCCAATGATAAGAGTGAATCCCTGATCAATGAGCTTAAGGAATCCGAGAAAATTATTGCCAGCTTGCAAGAAGAGTTAAAAAGTTTAAGAGAGTCGAAGAGTATGATTGAGGATCAACTCAAAACTCAAAAGACTATGAACGAAGATCTTGACACGCAGCTCAGAGTGGCCAGAGTTGACTTGAGTGAAGCTCATCAGAAGTTTTCATCTCTAGAAGATGAACTTGAGAACAAATACAACTGCTGTGAAGAATTGGAAGCTTCATGCGTTGACCTGCAGCTTCAGCTTGAAAGCAGTTTGAAGAAGAAAAGCCCTGGCTCCAGTCATAATCAAGAGGAAACGCAAGACAAAACTGAATGGGAGATAACAGCTGCTTCAGAAAAATTGGCAGAATGCCAAGAGACTATACTTAACCTCGGGAAGCAGTTAAAGGCAATGGCTGCACCAAGAGAAGCAGCCCTTTTTGACAAGGTCATCACTGATCCCGCTAATGTAAATACCACAACAGCCATAGCCACAGTCCCTACCTCAAACAAGACCATGAGCCGCAGGTCCTCTCTCCTTGATAAAATGCTTGCAGAAGATGGCACTACCACCAAAGATTCTACATCTCCAAAGACAAAAGAAGTTGACGATAATTCCACTTCCACATTCGGTCCCAAGAAGGTAGTAGAGCCCCTCGAGAATATTCTCAATTTAAAAGTTAAATACCAGGATGAGGATGCTACAACTGGTTCATTTGCTCTGGTGCCTAGCAAGAAACGAAATGGGAGTTTATGGAGAAAGCTAATCTGGAGAAGGAAGAAAAGTAGCAGCAAGAAAGCACCCCTTCCGATCACCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FPP

Protein Analysis

1051

Amino Acids

117.97

Weight (kDa)

5.55

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPP PF05911 32 - 890 9.5e-290 Filament-like plant protein, long coiled-coil
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1809
AasI GACNNNNNNGTC 1 cut(s) 576
Acc36I ACCTGC 2 cut(s) 2589, 2847
AccB1I GGYRCC 1 cut(s) 3055
AciI CCGC 3 cut(s) 1112, 2793, 2854
AclWI GGATC 2 cut(s) 2427, 2783
AcoI YGGCCR 3 cut(s) 609, 1408, 2475
AcsI RAATTY 5 cut(s) 250, 434, 704, 1831, 2132
AcuI CTGAAG 9 cut(s) 282, 339, 576, 1281, 1468, 1986, 2285, 2573, 2667
AdeI CACNNNGTG 1 cut(s) 2078
AfiI CCNNNNNNNGG 5 cut(s) 486, 1212, 1516, 1989, 3025
AflII CTTAAG 1 cut(s) 2342
AflIII ACRYGT 1 cut(s) 1068
AhdI GACNNNNNGTC 1 cut(s) 1474
AjnI CCWGG 6 cut(s) 801, 820, 1542, 1983, 2620, 3018
AleI CACNNNNGTG 1 cut(s) 1575
Alw21I GWGCWC 1 cut(s) 1572
Alw26I GTCTC 5 cut(s) 303, 470, 1354, 1803, 2702
AlwI GGATC 2 cut(s) 2427, 2783
AlwNI CAGNNNCTG 3 cut(s) 827, 1700, 2273
Ama87I CYCGRG 2 cut(s) 2723, 2987
AoxI GGCC 6 cut(s) 609, 1408, 1948, 1980, 2165, 2475
ApoI RAATTY 5 cut(s) 250, 434, 704, 1831, 2132
ArsI GACNNNNNNTTYG 2 cut(s) 1487, 1519
Asp700I GAANNNNTTC 2 cut(s) 234, 874
AspLEI GCGC 1 cut(s) 995
AspS9I GGNCC 4 cut(s) 824, 1981, 2859, 2963
AsuHPI GGTGA 4 cut(s) 214, 1380, 1698, 3136
AvaI CYCGRG 2 cut(s) 2723, 2987
AvaII GGWCC 3 cut(s) 824, 2859, 2963
AxyI CCTNAGG 1 cut(s) 948
BalI TGGCCA 3 cut(s) 611, 1410, 2477
BanI GGYRCC 1 cut(s) 3055
BanII GRGCYC 3 cut(s) 349, 908, 2985
BauI CACGAG 1 cut(s) 1128
BbsI GAAGAC 2 cut(s) 428, 574
Bbv12I GWGCWC 1 cut(s) 1572
BccI CCATC 8 cut(s) 91, 335, 445, 525, 577, 1306, 1514, 2885
BceAI ACGGC 4 cut(s) 256, 1560, 1780, 1995
BciT130I CCWGG 6 cut(s) 803, 822, 1544, 1985, 2622, 3020
BclI TGATCA 1 cut(s) 2331
BcoDI GTCTC 5 cut(s) 303, 470, 1354, 1803, 2702
BfaI CTAG 7 cut(s) 128, 1197, 1340, 1439, 1607, 2519, 3060
BfmI CTRYAG 3 cut(s) 1158, 2213, 2582
BfrI CTTAAG 1 cut(s) 2342
BfuAI ACCTGC 2 cut(s) 2589, 2847
BglI GCCNNNNNGGC 1 cut(s) 221
BglII AGATCT 3 cut(s) 136, 1741, 2452
Bme1390I CCNGG 6 cut(s) 803, 822, 1544, 1985, 2622, 3020
Bme18I GGWCC 3 cut(s) 824, 2859, 2963
BmeRI GACNNNNNGTC 1 cut(s) 1474
BmeT110I CYCGRG 2 cut(s) 2723, 2987
BmgT120I GGNCC 4 cut(s) 824, 1981, 2859, 2963
BmiI GGNNCC 6 cut(s) 346, 954, 1541, 2626, 2965, 3057
BmrFI CCNGG 6 cut(s) 803, 822, 1544, 1985, 2622, 3020
BmsI GCATC 7 cut(s) 400, 715, 1172, 1674, 1807, 2029, 3019
BoxI GACNNNNGTC 1 cut(s) 2302
BpiI GAAGAC 2 cut(s) 428, 574
BplI GAGNNNNNCTC 2 cut(s) 2482, 2514
BpmI CTGGAG 5 cut(s) 1259, 1526, 1785, 2611, 3121
BpuEI CTTGAG 7 cut(s) 335, 689, 701, 767, 1004, 2509, 2552
BsaI GGTCTC 2 cut(s) 470, 1354
BsaJI CCNNGG 5 cut(s) 834, 1431, 1983, 2620, 2722
BsaXI ACNNNNNCTCC 2 cut(s) 883, 913
Bsc4I CCNNNNNNNGG 5 cut(s) 486, 1212, 1516, 1989, 3025
Bse1I ACTGG 6 cut(s) 204, 480, 1242, 1994, 2628, 3043
Bse21I CCTNAGG 1 cut(s) 948
Bse3DI GCAATG 2 cut(s) 111, 2748
BseBI CCWGG 6 cut(s) 803, 822, 1544, 1985, 2622, 3020
BseDI CCNNGG 5 cut(s) 834, 1431, 1983, 2620, 2722
BseGI GGATG 7 cut(s) 346, 1321, 1525, 2044, 2071, 3028, 3034
BseLI CCNNNNNNNGG 5 cut(s) 486, 1212, 1516, 1989, 3025
BseMI GCAATG 2 cut(s) 111, 2748
BseMII CTCAG 5 cut(s) 319, 461, 939, 972, 2482
BseNI ACTGG 6 cut(s) 204, 480, 1242, 1994, 2628, 3043
BseRI GAGGAG 4 cut(s) 710, 904, 907, 1521
BseYI CCCAGC 1 cut(s) 243
BsgI GTGCAG 3 cut(s) 1101, 1713, 2733
Bsh1285I CGRYCG 1 cut(s) 1116
BshFI GGCC 6 cut(s) 611, 1410, 1950, 1982, 2167, 2477
BshNI GGYRCC 1 cut(s) 3055
BsiEI CGRYCG 1 cut(s) 1116
BsiHKAI GWGCWC 1 cut(s) 1572
BsiHKCI CYCGRG 2 cut(s) 2723, 2987
BslFI GGGAC 3 cut(s) 1906, 2813, 2949
BslI CCNNNNNNNGG 5 cut(s) 486, 1212, 1516, 1989, 3025
BsmAI GTCTC 5 cut(s) 303, 470, 1354, 1803, 2702
BsmBI CGTCTC 2 cut(s) 303, 1803
BsmFI GGGAC 3 cut(s) 1906, 2813, 2949
BsmI GAATGC 2 cut(s) 604, 2705
BsnI GGCC 6 cut(s) 611, 1410, 1950, 1982, 2167, 2477
Bso31I GGTCTC 2 cut(s) 470, 1354
BsoBI CYCGRG 2 cut(s) 2723, 2987
Bsp1286I GDGCHC 4 cut(s) 349, 908, 1572, 2985
BspACI CCGC 3 cut(s) 1112, 2793, 2854
BspANI GGCC 6 cut(s) 611, 1410, 1950, 1982, 2167, 2477
BspCNI CTCAG 5 cut(s) 318, 460, 940, 973, 2481
BspHI TCATGA 2 cut(s) 406, 3149
BspLI GGNNCC 6 cut(s) 346, 954, 1541, 2626, 2965, 3057
BspMAI CTGCAG 2 cut(s) 2217, 2586
BspMI ACCTGC 2 cut(s) 2589, 2847
BspPI GGATC 2 cut(s) 2427, 2783
BspQI GCTCTTC 1 cut(s) 2202
BspT107I GGYRCC 1 cut(s) 3055
BspTI CTTAAG 1 cut(s) 2342
BspTNI GGTCTC 2 cut(s) 470, 1354
BsrDI GCAATG 2 cut(s) 111, 2748
BsrI ACTGG 6 cut(s) 204, 480, 1242, 1994, 2628, 3043
BssECI CCNNGG 5 cut(s) 834, 1431, 1983, 2620, 2722
BssSI CACGAG 1 cut(s) 1128
BssT1I CCWWGG 2 cut(s) 834, 1431
Bst2BI CACGAG 1 cut(s) 1128
Bst2UI CCWGG 6 cut(s) 803, 822, 1544, 1985, 2622, 3020
Bst4CI ACNGT 6 cut(s) 71, 1056, 1079, 1288, 1511, 2827
Bst6I CTCTTC 6 cut(s) 87, 456, 1902, 2202, 2373, 2399
BstAFI CTTAAG 1 cut(s) 2342
BstAPI GCANNNNNTGC 1 cut(s) 2747
BstC8I GCNNGC 9 cut(s) 162, 362, 1271, 1408, 1849, 1948, 2368, 2372, 2883
BstDEI CTNAG 7 cut(s) 305, 447, 521, 948, 981, 1745, 2468
BstF5I GGATG 7 cut(s) 346, 1321, 1525, 2044, 2071, 3028, 3034
BstHHI GCGC 1 cut(s) 995
BstMAI GTCTC 5 cut(s) 303, 470, 1354, 1803, 2702
BstMCI CGRYCG 1 cut(s) 1116
BstMWI GCNNNNNNNGC 9 cut(s) 221, 230, 608, 728, 836, 1202, 1479, 2590, 2747
BstNI CCWGG 6 cut(s) 803, 822, 1544, 1985, 2622, 3020
BstNSI RCATGY 4 cut(s) 215, 364, 1072, 1281
BstPAI GACNNNNGTC 1 cut(s) 2302
BstSCI CCNGG 6 cut(s) 801, 820, 1542, 1983, 2620, 3018
BstSFI CTRYAG 3 cut(s) 1158, 2213, 2582
BstV2I GAAGAC 2 cut(s) 428, 574
BstX2I RGATCY 3 cut(s) 136, 1741, 2452
BstYI RGATCY 3 cut(s) 136, 1741, 2452
Bsu36I CCTNAGG 1 cut(s) 948
BsuRI GGCC 6 cut(s) 611, 1410, 1950, 1982, 2167, 2477
BtgZI GCGATG 2 cut(s) 1200, 1464
BtsCI GGATG 7 cut(s) 346, 1321, 1525, 2044, 2071, 3028, 3034
BtsI GCAGTG 2 cut(s) 1350, 2002
BtsIMutI CAGTG 6 cut(s) 543, 1350, 1694, 1795, 2002, 2784
BveI ACCTGC 2 cut(s) 2589, 2847
Cac8I GCNNGC 9 cut(s) 162, 362, 1271, 1408, 1849, 1948, 2368, 2372, 2883
CaiI CAGNNNCTG 3 cut(s) 827, 1700, 2273
CciI TCATGA 2 cut(s) 406, 3149
CfoI GCGC 1 cut(s) 995
Cfr13I GGNCC 4 cut(s) 824, 1981, 2859, 2963
CseI GACGC 1 cut(s) 320
DdeI CTNAG 7 cut(s) 305, 447, 521, 948, 981, 1745, 2468
DraI TTTAAA 1 cut(s) 3006
DraIII CACNNNGTG 1 cut(s) 2078
DrdI GACNNNNNNGTC 1 cut(s) 576
DriI GACNNNNNGTC 1 cut(s) 1474
DseDI GACNNNNNNGTC 1 cut(s) 576
EaeI YGGCCR 3 cut(s) 609, 1408, 2475
Eam1104I CTCTTC 6 cut(s) 87, 456, 1902, 2202, 2373, 2399
Eam1105I GACNNNNNGTC 1 cut(s) 1474
EarI CTCTTC 6 cut(s) 87, 456, 1902, 2202, 2373, 2399
Eco130I CCWWGG 2 cut(s) 834, 1431
Eco147I AGGCCT 1 cut(s) 2167
Eco24I GRGCYC 3 cut(s) 349, 908, 2985
Eco31I GGTCTC 2 cut(s) 470, 1354
Eco47I GGWCC 3 cut(s) 824, 2859, 2963
Eco57I CTGAAG 9 cut(s) 282, 339, 576, 1281, 1468, 1986, 2285, 2573, 2667
Eco81I CCTNAGG 1 cut(s) 948
Eco88I CYCGRG 2 cut(s) 2723, 2987
EcoO109I RGGNCCY 2 cut(s) 824, 2859
EcoRI GAATTC 3 cut(s) 434, 704, 1831
EcoRII CCWGG 6 cut(s) 801, 820, 1542, 1983, 2620, 3018
EcoT14I CCWWGG 2 cut(s) 834, 1431
EcoT38I GRGCYC 3 cut(s) 349, 908, 2985
ErhI CCWWGG 2 cut(s) 834, 1431
Esp3I CGTCTC 2 cut(s) 303, 1803
FaqI GGGAC 3 cut(s) 1906, 2813, 2949
FauI CCCGC 1 cut(s) 2800
FauNDI CATATG 1 cut(s) 652
FbaI TGATCA 1 cut(s) 2331
FokI GGATG 7 cut(s) 353, 1328, 1532, 2051, 2078, 3035, 3041
FriOI GRGCYC 3 cut(s) 349, 908, 2985
FspBI CTAG 7 cut(s) 128, 1197, 1340, 1439, 1607, 2519, 3060
GlaI GCGC 1 cut(s) 994
GsaI CCCAGC 1 cut(s) 247
GsuI CTGGAG 5 cut(s) 1259, 1526, 1785, 2611, 3121
HaeIII GGCC 6 cut(s) 611, 1410, 1950, 1982, 2167, 2477
HgaI GACGC 1 cut(s) 320
HhaI GCGC 1 cut(s) 995
Hin6I GCGC 1 cut(s) 993
HinP1I GCGC 1 cut(s) 993
HincII GTYRAC 6 cut(s) 67, 552, 883, 2485, 2578, 2938
HindII GTYRAC 6 cut(s) 67, 552, 883, 2485, 2578, 2938
HindIII AAGCTT 2 cut(s) 144, 2565
HphI GGTGA 4 cut(s) 214, 1380, 1698, 3136
Hpy166II GTNNAC 7 cut(s) 67, 238, 552, 883, 2485, 2578, 2938
Hpy8I GTNNAC 7 cut(s) 67, 238, 552, 883, 2485, 2578, 2938
Hpy99I CGWCG 1 cut(s) 717
HpyCH4III ACNGT 6 cut(s) 71, 1056, 1079, 1288, 1511, 2827
HpyF10VI GCNNNNNNNGC 9 cut(s) 221, 230, 608, 728, 836, 1202, 1479, 2590, 2747
HpyF3I CTNAG 7 cut(s) 305, 447, 521, 948, 981, 1745, 2468
HspAI GCGC 1 cut(s) 993
Ksp22I TGATCA 1 cut(s) 2331
LguI GCTCTTC 1 cut(s) 2202
LmnI GCTCC 8 cut(s) 344, 958, 1240, 1292, 1534, 1545, 1715, 2630
LweI GCATC 7 cut(s) 400, 715, 1172, 1674, 1807, 2029, 3019
MaeI CTAG 7 cut(s) 128, 1197, 1340, 1439, 1607, 2519, 3060
MaeIII GTNAC 5 cut(s) 1050, 1696, 1731, 1922, 2111
MfeI CAATTG 1 cut(s) 335
MflI RGATCY 3 cut(s) 136, 1741, 2452
MhlI GDGCHC 4 cut(s) 349, 908, 1572, 2985
MlsI TGGCCA 3 cut(s) 611, 1410, 2477
MluNI TGGCCA 3 cut(s) 611, 1410, 2477
MlyI GAGTC 8 cut(s) 586, 629, 920, 1484, 1511, 1673, 1888, 2408
MmeI TCCRAC 7 cut(s) 438, 695, 1096, 1270, 1530, 2080, 2268
Mox20I TGGCCA 3 cut(s) 611, 1410, 2477
MroXI GAANNNNTTC 2 cut(s) 234, 874
MscI TGGCCA 3 cut(s) 611, 1410, 2477
MslI CAYNNNNRTG 2 cut(s) 1139, 1575
Msp20I TGGCCA 3 cut(s) 611, 1410, 2477
MspA1I CMGCKG 2 cut(s) 1112, 2678
MspCI CTTAAG 1 cut(s) 2342
MspR9I CCNGG 6 cut(s) 803, 822, 1544, 1985, 2622, 3020
MunI CAATTG 1 cut(s) 335
Mva1269I GAATGC 2 cut(s) 604, 2705
MvaI CCWGG 6 cut(s) 803, 822, 1544, 1985, 2622, 3020
MwoI GCNNNNNNNGC 9 cut(s) 221, 230, 608, 728, 836, 1202, 1479, 2590, 2747
NdeI CATATG 1 cut(s) 652
NlaIV GGNNCC 6 cut(s) 346, 954, 1541, 2626, 2965, 3057
NmuCI GTSAC 1 cut(s) 2111
NspI RCATGY 4 cut(s) 215, 364, 1072, 1281
OliI CACNNNNGTG 1 cut(s) 1575
PaeI GCATGC 1 cut(s) 364
PaeR7I CTCGAG 1 cut(s) 2987
PagI TCATGA 2 cut(s) 406, 3149
PceI AGGCCT 1 cut(s) 2167
PciI ACATGT 1 cut(s) 1068
PciSI GCTCTTC 1 cut(s) 2202
PcsI WCGNNNNNNNCGW 1 cut(s) 379
PctI GAATGC 2 cut(s) 604, 2705
PdmI GAANNNNTTC 2 cut(s) 234, 874
PflFI GACNNNGTC 2 cut(s) 62, 2777
PfoI TCCNGGA 1 cut(s) 1542
PleI GAGTC 8 cut(s) 585, 628, 920, 1483, 1510, 1673, 1888, 2407
PpsI GAGTC 8 cut(s) 585, 628, 920, 1483, 1510, 1673, 1888, 2407
PpuMI RGGWCCY 2 cut(s) 824, 2859
PscI ACATGT 1 cut(s) 1068
PshAI GACNNNNGTC 1 cut(s) 2302
PsiI TTATAA 1 cut(s) 1809
Psp5II RGGWCCY 2 cut(s) 824, 2859
Psp6I CCWGG 6 cut(s) 801, 820, 1542, 1983, 2620, 3018
PspFI CCCAGC 1 cut(s) 243
PspGI CCWGG 6 cut(s) 801, 820, 1542, 1983, 2620, 3018
PspN4I GGNNCC 6 cut(s) 346, 954, 1541, 2626, 2965, 3057
PspPI GGNCC 4 cut(s) 824, 1981, 2859, 2963
PspPPI RGGWCCY 2 cut(s) 824, 2859
PstI CTGCAG 2 cut(s) 2217, 2586
PstNI CAGNNNCTG 3 cut(s) 827, 1700, 2273
PsuI RGATCY 3 cut(s) 136, 1741, 2452
PsyI GACNNNGTC 2 cut(s) 62, 2777
PvuII CAGCTG 1 cut(s) 2678
RseI CAYNNNNRTG 2 cut(s) 1139, 1575
SapI GCTCTTC 1 cut(s) 2202
Sau96I GGNCC 4 cut(s) 824, 1981, 2859, 2963
SchI GAGTC 8 cut(s) 586, 629, 920, 1484, 1511, 1673, 1888, 2408
ScrFI CCNGG 6 cut(s) 803, 822, 1544, 1985, 2622, 3020
SduI GDGCHC 4 cut(s) 349, 908, 1572, 2985
SfaNI GCATC 7 cut(s) 400, 715, 1172, 1674, 1807, 2029, 3019
SfcI CTRYAG 3 cut(s) 1158, 2213, 2582
Sfr274I CTCGAG 1 cut(s) 2987
SinI GGWCC 3 cut(s) 824, 2859, 2963
SlaI CTCGAG 1 cut(s) 2987
SmiMI CAYNNNNRTG 2 cut(s) 1139, 1575
SmlI CTYRAG 9 cut(s) 350, 668, 680, 746, 1019, 2342, 2488, 2531, 2987
SmoI CTYRAG 9 cut(s) 350, 668, 680, 746, 1019, 2342, 2488, 2531, 2987
SphI GCATGC 1 cut(s) 364
SseBI AGGCCT 1 cut(s) 2167
SsiI CCGC 3 cut(s) 1112, 2793, 2854
SspI AATATT 1 cut(s) 2995
SspMI CTAG 7 cut(s) 128, 1197, 1340, 1439, 1607, 2519, 3060
StuI AGGCCT 1 cut(s) 2167
StyD4I CCNGG 6 cut(s) 801, 820, 1542, 1983, 2620, 3018
StyI CCWWGG 2 cut(s) 834, 1431
TaaI ACNGT 6 cut(s) 71, 1056, 1079, 1288, 1511, 2827
TaqI TCGA 8 cut(s) 382, 438, 661, 929, 1779, 2137, 2402, 2988
TaqII GACCGA 1 cut(s) 2951
TauI GCSGC 1 cut(s) 2856
TscAI CASTG 6 cut(s) 543, 1350, 1694, 1795, 2009, 2791
TseFI GTSAC 1 cut(s) 2111
Tsp45I GTSAC 1 cut(s) 2111
TspRI CASTG 6 cut(s) 543, 1350, 1694, 1795, 2009, 2791
Tth111I GACNNNGTC 2 cut(s) 62, 2777
Vha464I CTTAAG 1 cut(s) 2342
VpaK11BI GGWCC 3 cut(s) 824, 2859, 2963
XapI RAATTY 5 cut(s) 250, 434, 704, 1831, 2132
XbaI TCTAGA 1 cut(s) 2518
XceI RCATGY 4 cut(s) 215, 364, 1072, 1281
XcmI CCANNNNNNNNNTGG 1 cut(s) 1513
XhoI CTCGAG 1 cut(s) 2987
XmnI GAANNNNTTC 2 cut(s) 234, 874
XspI CTAG 7 cut(s) 128, 1197, 1340, 1439, 1607, 2519, 3060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.