RchiOBHm_Chr2g0106201

Filament-like plant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0007037
Physical Location & Seq
Reverse (-)
17607857 .. 17613511
5655 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48030

Sequence Viewer

Length: 3147 bp
ATGGATAAGGCGTGGCTATGGAGGAAGAAATCTACAGAGAAGCTGCCCATTGTTGCTGACAAAGTCAACGGTTCGTCAAAAGGAAATGAAGAAGAGATGGAGGCAATTCTTAATGAGAAGGCAGAGCTAGAGAAAGATTTGAAAGCTTTAAGTGATAAGCTGGCTTCAGCTCTCTCTGATTGTAAGAATAAAGATGAACTTGTGAAGAAACATGCCAACATGGCACAGGAAGCTGTTCAAGGCTGGGAGAAGGTAGAAGCAGAAGCAGGGTTTCTGAAGCAAGAATTAGATAAATCTTTGCAACTCAGAGATGCCGGTGAAGAAAGAATATCTCAATTGGATGGAGCTCTCAAGGAGTGCATGCAGCAGCTACGATATGTTCGAGATGAACAACAGCAAAGGGTTCATGATGCTGTGATGAAGACAACAAGGGAATTTGAGAAATCCCAGATGGTATTGGAAGAGAAGCTAGCAGAGACCAGTAAAAGGCTTTCTAAAATAGGTGCTGAAAACACCCATCTTAGCAAGGCTCTTTCAGTGAAGGAAAAGTTGACTGAAGATTTAAGAAAACAATTGAGTCAGATGGAAGCTGATTTGAATGCACTTATGGCTAGATTAGAGTCCACTGAGAAAGACAATGCTTCTTTGACATATGAGGTTCGAGTGCTTGAGAAAGAACTTGATATCAGGAATGAGGAGAGAGAATTTAATCGTCGGACTGCTGATGCATCACACAAGCAACACCTTGAGGGTGCAAAAAAAATTGCAAAGTTAGAATCAGAATGTCAGAGGTTGCGTCTCCTGGTCAGGAAGCGGTTGCCAGGTCCTGCTGCCTTGGTTAAAATGAAAAATGAAGTTGAAATGCTCGGAAGAGATTCTGTTGACATGAGGAGGAGAAGTTTGAGCCCAAATGGTTTAAGGTATGACTCTACTGCTGATAAATTTCCTGAGGCTCCCACCAAAAGGATCAATTTTCTAACCGAGCAGTTATGTGCTATGGAAGAAGAAAATGCAATTCTCAAGGAAGCACTCAATAAGAAGATGAATGAGTTACAGTTTTCCAAAAACATGTATAACCGTGCAGCCTCCAAATTATCACAAGTTGAAACAGCGGTTGGAGAATCCCCAAGAGGTACTCTTATGCCACATGAACCCTCTGTAGCATCTATGTCTGATATTGGTAGCGATGATAAGGCTAGTTGTGCAGAATCATGGGCTTCTGCTTTGATTACAGAACTGGAGCATTTTAGAAATGAAAAGCAAAAAGGCTTGCCGGCGTGCAAAACTGTTGGAGCTTCAGACATAAATCTGATGGATGACTTCGTTGAAATGGAAAAACTAGCAGTGGTCTCTGCTGATAAAGTAAGTGTTGGTTCTTATGCTTCCTCACCAGCTAATACATTTGCTGGCCATTTGGAAAATCAGTATTCCTCGGAACTAGGGGGTAGCGATATAGTTCCTGTATCTGACAGTGAGTCAGGCTTCAGTTTGTCAAACCGGGAGACCAGCCGTATTGTTGACGTCAAAGCTCCTCATTGGCTCCAGGATATAGTGAAATTGGTGTTAGAGCACAGCCGTGTTGCAGGAAGAAGCCCTGAACAAATACAAGAGGATATAAGAATAGCTTTGGCAACTACAACCAATCCTTCTTCTGCTAAAAGCTGCATCTCATGGAAAAGCTCAAATCAGTGTCCAGTAACTGATTCAACCAATGGAGTAAGTGATCAGCAGTTACAACCAGATCTTAAGAAATCAATATGCAAAATAATTGAGCTTATTGAAGGAATCAGTTTGCCATCTCCAGATTATAACACAGACGCCAGATACAAGAATTCAGAAACACAGGCAGGCTACATGGTTCGTGTTTTCCAGTGGAAAACTTCTGAACTTGGCACTCTTCTACAACAATTTGTTCATGCTTGTTATAATCTGTTAAATGGAAAGGCTGGTCTTGATAAATTTGCTGAAGAACTAACTACGGCTTTGGACTGGATTTTGAACCACTGCTTTTCACTTCAAGATGTTTCAAGCATGAAGGATGCAATTAAGAAGCAATTTGATTGGGATGATACACGAAGTGAAAGCGAGGCAGAAGTTGGAATGGTTGGTCACTATTCAGATGCAGACAAATTTCGAGTTCTCAGAGCACACACATCATTTAGGCCTATGGCTCCTTCTTCAAATGGCCATGGCAGTCAAATAGAAGAGTTGCAGTCCAATTTGGTCCAAGAAAACCAAAAGTTAAAGGATGAACTTGCGAATACAGAATCTGGCAAAAAAGAGTTGGAAGGCAGACTTCAGTCAGCCTGTGATAAGAGTGAATTCCTGATCAATCAGCTTAAGGAATCCGAGAAAATTATTGCCAGCTTGCAAGAAGAGTTACAAAGTTTAAGAGACTCGAAGAGTTTGATGGAGGATCAACTCAAAACTCAAAAGACAATGAATGAAGATCTTGACACGCAGCTCACAGTGACCAGAGTTGAATTGAGTGAAACTCATCAGAAGTTTTCATCTCTAGAAGATGAGCTCGAGAACAAATACAACTGCTGTGAAGAATTGGAAGCTTCATGCGTTGACCTGCAGCTTCAGCTCGAAAGTATGAAGACGAAAAGCCCTGACTCCAATCTTAACCAGGAGGAAAGGCAAGACCAAACTGAATGGGAGATAACAGCTGCTTCAGAAAAGTTGGCAGAATGCCAAGAGACTATACTTAACCTTGGGAAGCAGTTGAAGGCGATGGCTGCACCAAGAGAAGCAGCCCTTTTTGACAAGGTCATTGCTGATCCCACTGATGTAAATACCACAACAACCATAGCCACTGGCGCTACCTCAAACAAGACCATGAGCCGCCGGTCCTCTCTACTTGATCAAATGCTAGCAGAAGATGGCACTACGACCAAAGATTTTATATCTCCCAAGACAAAAGAAGTTGACAATAATTTCACCTCCACATTTGGTCCCAAGAGGGTAGTAGAGCCCCTCGAGAATATCCTCAATTTAAATGTGAAGCACCAGGATGAGAATGCTGCTACTGGTTCATTTGCTCTGGTGCCTAGCAAGAAACGAAGTGGGAGTTTATGGAGGAAGCTACTCTGGAGACGCACAAAAAGTAGCAGCAAGAAAGCACCCCTTCCGATCGCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FPP

Protein Analysis

1048

Amino Acids

117.52

Weight (kDa)

5.4

Isoelectric Point (pI)

51.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPP PF05911 64 - 920 3e-290 Filament-like plant protein, long coiled-coil
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1809, 1926
AatII GACGTC 1 cut(s) 1524
Acc36I ACCTGC 1 cut(s) 2586
AccB1I GGYRCC 1 cut(s) 3049
AciI CCGC 3 cut(s) 814, 1112, 2848
AclWI GGATC 3 cut(s) 974, 2424, 2777
AcoI YGGCCR 2 cut(s) 1408, 2185
AcsI RAATTY 7 cut(s) 434, 704, 941, 1831, 1958, 2129, 2321
AcuI CTGAAG 9 cut(s) 150, 296, 576, 1281, 1468, 1986, 2282, 2570, 2661
AcyI GRCGYC 2 cut(s) 1521, 1818
AdeI CACNNNGTG 1 cut(s) 2078
AfaI GTAC 1 cut(s) 1135
AfiI CCNNNNNNNGG 2 cut(s) 486, 963
AflII CTTAAG 2 cut(s) 1745, 2339
AflIII ACRYGT 1 cut(s) 1068
AhdI GACNNNNNGTC 1 cut(s) 1474
AjnI CCWGG 5 cut(s) 801, 820, 1542, 2631, 3012
AjuI GAANNNNNNNTTGG 2 cut(s) 1098, 1130
AleI CACNNNNGTG 1 cut(s) 1575
Alw21I GWGCWC 4 cut(s) 349, 1572, 2149, 2529
Alw26I GTCTC 7 cut(s) 470, 803, 1354, 1496, 2388, 2696, 3091
AlwI GGATC 3 cut(s) 974, 2424, 2777
AlwNI CAGNNNCTG 3 cut(s) 827, 1700, 2270
Ama87I CYCGRG 2 cut(s) 2528, 2981
AoxI GGCC 3 cut(s) 1408, 2162, 2185
ApoI RAATTY 7 cut(s) 434, 704, 941, 1831, 1958, 2129, 2321
Asp700I GAANNNNTTC 2 cut(s) 234, 874
AspLEI GCGC 1 cut(s) 2825
AspS9I GGNCC 4 cut(s) 824, 2224, 2853, 2957
AsuC2I CCSGG 1 cut(s) 1499
AsuHPI GGTGA 3 cut(s) 329, 1380, 2935
AsuNHI GCTAGC 2 cut(s) 469, 2875
AvaI CYCGRG 2 cut(s) 2528, 2981
AvaII GGWCC 4 cut(s) 824, 2224, 2853, 2957
AxyI CCTNAGG 1 cut(s) 948
BalI TGGCCA 2 cut(s) 1410, 2187
BanI GGYRCC 1 cut(s) 3049
BanII GRGCYC 4 cut(s) 349, 908, 2529, 2979
BbsI GAAGAC 2 cut(s) 428, 2609
Bbv12I GWGCWC 4 cut(s) 349, 1572, 2149, 2529
BceAI ACGGC 3 cut(s) 1494, 1560, 1995
BciT130I CCWGG 5 cut(s) 803, 822, 1544, 2633, 3014
BclI TGATCA 3 cut(s) 1723, 2328, 2866
BcnI CCSGG 1 cut(s) 1499
BcoDI GTCTC 7 cut(s) 470, 803, 1354, 1496, 2388, 2696, 3091
BfaI CTAG 9 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516, 2876, 3054
BfmI CTRYAG 3 cut(s) 33, 1158, 2579
BfoI RGCGCY 1 cut(s) 2826
BfrI CTTAAG 2 cut(s) 1745, 2339
BfuAI ACCTGC 1 cut(s) 2586
BglI GCCNNNNNGGC 1 cut(s) 221
BglII AGATCT 2 cut(s) 1741, 2449
Bme1390I CCNGG 6 cut(s) 803, 822, 1499, 1544, 2633, 3014
Bme18I GGWCC 4 cut(s) 824, 2224, 2853, 2957
BmeRI GACNNNNNGTC 1 cut(s) 1474
BmeT110I CYCGRG 2 cut(s) 2528, 2981
BmgT120I GGNCC 4 cut(s) 824, 2224, 2853, 2957
BmiI GGNNCC 5 cut(s) 954, 1541, 2172, 2959, 3051
BmrFI CCNGG 6 cut(s) 803, 822, 1499, 1544, 2633, 3014
BmsI GCATC 8 cut(s) 301, 400, 715, 737, 1172, 1674, 2029, 2110
BmtI GCTAGC 2 cut(s) 473, 2879
BoxI GACNNNNGTC 1 cut(s) 2299
BpiI GAAGAC 2 cut(s) 428, 2609
BplI GAGNNNNNCTC 2 cut(s) 2479, 2511
BpmI CTGGAG 4 cut(s) 1259, 1526, 1785, 3115
BpuEI CTTGAG 4 cut(s) 335, 689, 767, 1004
BpuMI CCSGG 1 cut(s) 1499
BsaHI GRCGYC 2 cut(s) 1521, 1818
BsaI GGTCTC 3 cut(s) 470, 1354, 1496
BsaJI CCNNGG 4 cut(s) 834, 1431, 2188, 2716
BsaXI ACNNNNNCTCC 2 cut(s) 883, 913
Bsc4I CCNNNNNNNGG 2 cut(s) 486, 963
Bse118I RCCGGY 3 cut(s) 314, 1273, 2850
Bse1I ACTGG 7 cut(s) 480, 1242, 1694, 1870, 1994, 2824, 3037
Bse21I CCTNAGG 1 cut(s) 948
Bse3DI GCAATG 1 cut(s) 2775
BseBI CCWGG 5 cut(s) 803, 822, 1544, 2633, 3014
BseDI CCNNGG 4 cut(s) 834, 1431, 2188, 2716
BseGI GGATG 6 cut(s) 346, 1321, 2044, 2071, 2254, 3022
BseLI CCNNNNNNNGG 2 cut(s) 486, 963
BseMI GCAATG 1 cut(s) 2775
BseMII CTCAG 4 cut(s) 319, 618, 939, 2155
BseNI ACTGG 7 cut(s) 480, 1242, 1694, 1870, 1994, 2824, 3037
BseRI GAGGAG 4 cut(s) 710, 904, 907, 1521
BseYI CCCAGC 1 cut(s) 243
BsgI GTGCAG 3 cut(s) 1101, 1224, 2727
Bsh1285I CGRYCG 1 cut(s) 3138
BshFI GGCC 3 cut(s) 1410, 2164, 2187
BshNI GGYRCC 1 cut(s) 3049
BsiEI CGRYCG 1 cut(s) 3138
BsiHKAI GWGCWC 4 cut(s) 349, 1572, 2149, 2529
BsiHKCI CYCGRG 2 cut(s) 2528, 2981
BsiSI CCGG 4 cut(s) 315, 1274, 1498, 2851
BslFI GGGAC 1 cut(s) 2943
BslI CCNNNNNNNGG 2 cut(s) 486, 963
BsmAI GTCTC 7 cut(s) 470, 803, 1354, 1496, 2388, 2696, 3091
BsmBI CGTCTC 2 cut(s) 803, 3091
BsmFI GGGAC 1 cut(s) 2943
BsmI GAATGC 3 cut(s) 604, 2699, 3028
BsnI GGCC 3 cut(s) 1410, 2164, 2187
Bso31I GGTCTC 3 cut(s) 470, 1354, 1496
BsoBI CYCGRG 2 cut(s) 2528, 2981
Bsp1286I GDGCHC 6 cut(s) 349, 908, 1572, 2149, 2529, 2979
Bsp143I GATC 9 cut(s) 966, 1723, 1741, 2328, 2416, 2449, 2782, 2866, 3135
Bsp19I CCATGG 1 cut(s) 2188
BspACI CCGC 3 cut(s) 814, 1112, 2848
BspANI GGCC 3 cut(s) 1410, 2164, 2187
BspCNI CTCAG 4 cut(s) 318, 619, 940, 2154
BspHI TCATGA 2 cut(s) 406, 3143
BspLI GGNNCC 5 cut(s) 954, 1541, 2172, 2959, 3051
BspMAI CTGCAG 1 cut(s) 2583
BspMI ACCTGC 1 cut(s) 2586
BspOI GCTAGC 2 cut(s) 473, 2879
BspPI GGATC 3 cut(s) 974, 2424, 2777
BspT107I GGYRCC 1 cut(s) 3049
BspTI CTTAAG 2 cut(s) 1745, 2339
BspTNI GGTCTC 3 cut(s) 470, 1354, 1496
BsrDI GCAATG 1 cut(s) 2775
BsrFI RCCGGY 3 cut(s) 314, 1273, 2850
BsrI ACTGG 7 cut(s) 480, 1242, 1694, 1870, 1994, 2824, 3037
BssAI RCCGGY 3 cut(s) 314, 1273, 2850
BssECI CCNNGG 4 cut(s) 834, 1431, 2188, 2716
BssMI GATC 9 cut(s) 966, 1723, 1741, 2328, 2416, 2449, 2782, 2866, 3135
BssNI GRCGYC 2 cut(s) 1521, 1818
BssT1I CCWWGG 3 cut(s) 834, 2188, 2716
Bst2UI CCWGG 5 cut(s) 803, 822, 1544, 2633, 3014
Bst4CI ACNGT 6 cut(s) 71, 1056, 1079, 1288, 1472, 2470
Bst6I CTCTTC 7 cut(s) 87, 456, 865, 1902, 2199, 2370, 2396
BstACI GRCGYC 2 cut(s) 1521, 1818
BstAFI CTTAAG 2 cut(s) 1745, 2339
BstDEI CTNAG 5 cut(s) 305, 521, 627, 948, 2141
BstDSI CCRYGG 1 cut(s) 2188
BstF5I GGATG 6 cut(s) 346, 1321, 2044, 2071, 2254, 3022
BstH2I RGCGCY 1 cut(s) 2826
BstHHI GCGC 1 cut(s) 2825
BstKTI GATC 9 cut(s) 969, 1726, 1744, 2331, 2419, 2452, 2785, 2869, 3138
BstMAI GTCTC 7 cut(s) 470, 803, 1354, 1496, 2388, 2696, 3091
BstMBI GATC 9 cut(s) 966, 1723, 1741, 2328, 2416, 2449, 2782, 2866, 3135
BstMCI CGRYCG 1 cut(s) 3138
BstMWI GCNNNNNNNGC 7 cut(s) 221, 230, 608, 1202, 2587, 2741, 2822
BstNI CCWGG 5 cut(s) 803, 822, 1544, 2633, 3014
BstNSI RCATGY 3 cut(s) 215, 364, 1072
BstPAI GACNNNNGTC 1 cut(s) 2299
BstSCI CCNGG 6 cut(s) 801, 820, 1497, 1542, 2631, 3012
BstSFI CTRYAG 3 cut(s) 33, 1158, 2579
BstV2I GAAGAC 2 cut(s) 428, 2609
BstX2I RGATCY 2 cut(s) 1741, 2449
BstYI RGATCY 2 cut(s) 1741, 2449
Bsu36I CCTNAGG 1 cut(s) 948
BsuRI GGCC 3 cut(s) 1410, 2164, 2187
BtgI CCRYGG 1 cut(s) 2188
BtgZI GCGATG 2 cut(s) 1200, 2750
BtsCI GGATG 6 cut(s) 346, 1321, 2044, 2071, 2254, 3022
BtsI GCAGTG 2 cut(s) 1350, 2002
BveI ACCTGC 1 cut(s) 2586
CaiI CAGNNNCTG 3 cut(s) 827, 1700, 2270
CciI TCATGA 2 cut(s) 406, 3143
CfoI GCGC 1 cut(s) 2825
Cfr10I RCCGGY 3 cut(s) 314, 1273, 2850
Cfr13I GGNCC 4 cut(s) 824, 2224, 2853, 2957
CseI GACGC 3 cut(s) 785, 1826, 3108
Csp6I GTAC 1 cut(s) 1134
CviQI GTAC 1 cut(s) 1134
DdeI CTNAG 5 cut(s) 305, 521, 627, 948, 2141
DpnI GATC 9 cut(s) 968, 1725, 1743, 2330, 2418, 2451, 2784, 2868, 3137
DpnII GATC 9 cut(s) 966, 1723, 1741, 2328, 2416, 2449, 2782, 2866, 3135
DraI TTTAAA 1 cut(s) 3000
DraIII CACNNNGTG 1 cut(s) 2078
DriI GACNNNNNGTC 1 cut(s) 1474
EaeI YGGCCR 2 cut(s) 1408, 2185
Eam1104I CTCTTC 7 cut(s) 87, 456, 865, 1902, 2199, 2370, 2396
Eam1105I GACNNNNNGTC 1 cut(s) 1474
EarI CTCTTC 7 cut(s) 87, 456, 865, 1902, 2199, 2370, 2396
Ecl136II GAGCTC 2 cut(s) 347, 2527
Eco130I CCWWGG 3 cut(s) 834, 2188, 2716
Eco147I AGGCCT 1 cut(s) 2164
Eco24I GRGCYC 4 cut(s) 349, 908, 2529, 2979
Eco31I GGTCTC 3 cut(s) 470, 1354, 1496
Eco32I GATATC 1 cut(s) 685
Eco47I GGWCC 4 cut(s) 824, 2224, 2853, 2957
Eco53kI GAGCTC 2 cut(s) 347, 2527
Eco57I CTGAAG 9 cut(s) 150, 296, 576, 1281, 1468, 1986, 2282, 2570, 2661
Eco81I CCTNAGG 1 cut(s) 948
Eco88I CYCGRG 2 cut(s) 2528, 2981
EcoICRI GAGCTC 2 cut(s) 347, 2527
EcoO109I RGGNCCY 1 cut(s) 824
EcoRI GAATTC 2 cut(s) 1831, 2321
EcoRII CCWGG 5 cut(s) 801, 820, 1542, 2631, 3012
EcoRV GATATC 1 cut(s) 685
EcoT14I CCWWGG 3 cut(s) 834, 2188, 2716
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 4 cut(s) 349, 908, 2529, 2979
ErhI CCWWGG 3 cut(s) 834, 2188, 2716
Esp3I CGTCTC 2 cut(s) 803, 3091
FaqI GGGAC 1 cut(s) 2943
FauNDI CATATG 1 cut(s) 652
FbaI TGATCA 3 cut(s) 1723, 2328, 2866
FokI GGATG 6 cut(s) 353, 1328, 2051, 2078, 2261, 3029
FriOI GRGCYC 4 cut(s) 349, 908, 2529, 2979
FspBI CTAG 9 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516, 2876, 3054
GlaI GCGC 1 cut(s) 2824
GsaI CCCAGC 1 cut(s) 247
GsuI CTGGAG 4 cut(s) 1259, 1526, 1785, 3115
HaeII RGCGCY 1 cut(s) 2826
HaeIII GGCC 3 cut(s) 1410, 2164, 2187
HapII CCGG 4 cut(s) 315, 1274, 1498, 2851
HgaI GACGC 3 cut(s) 785, 1826, 3108
HhaI GCGC 1 cut(s) 2825
Hin1I GRCGYC 2 cut(s) 1521, 1818
Hin6I GCGC 1 cut(s) 2823
HinP1I GCGC 1 cut(s) 2823
HincII GTYRAC 6 cut(s) 67, 552, 883, 1519, 2575, 2932
HindII GTYRAC 6 cut(s) 67, 552, 883, 1519, 2575, 2932
HindIII AAGCTT 2 cut(s) 144, 2562
HpaII CCGG 4 cut(s) 315, 1274, 1498, 2851
HphI GGTGA 3 cut(s) 329, 1380, 2935
Hpy166II GTNNAC 7 cut(s) 67, 552, 624, 883, 1519, 2575, 2932
Hpy8I GTNNAC 7 cut(s) 67, 552, 624, 883, 1519, 2575, 2932
Hpy99I CGWCG 1 cut(s) 717
HpyCH4III ACNGT 6 cut(s) 71, 1056, 1079, 1288, 1472, 2470
HpyCH4IV ACGT 1 cut(s) 1521
HpyF10VI GCNNNNNNNGC 7 cut(s) 221, 230, 608, 1202, 2587, 2741, 2822
HpyF3I CTNAG 5 cut(s) 305, 521, 627, 948, 2141
HpySE526I ACGT 1 cut(s) 1521
Hsp92I GRCGYC 2 cut(s) 1521, 1818
HspAI GCGC 1 cut(s) 2823
KroI GCCGGC 1 cut(s) 1273
KroNI GCCGGC 1 cut(s) 1275
Ksp22I TGATCA 3 cut(s) 1723, 2328, 2866
Kzo9I GATC 9 cut(s) 966, 1723, 1741, 2328, 2416, 2449, 2782, 2866, 3135
LmnI GCTCC 7 cut(s) 344, 958, 1240, 1292, 1534, 1545, 2176
LweI GCATC 8 cut(s) 301, 400, 715, 737, 1172, 1674, 2029, 2110
MaeI CTAG 9 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516, 2876, 3054
MaeII ACGT 1 cut(s) 1521
MaeIII GTNAC 6 cut(s) 1050, 1696, 1731, 2108, 2379, 2470
MalI GATC 9 cut(s) 968, 1725, 1743, 2330, 2418, 2451, 2784, 2868, 3137
MboI GATC 9 cut(s) 966, 1723, 1741, 2328, 2416, 2449, 2782, 2866, 3135
MfeI CAATTG 2 cut(s) 335, 572
MflI RGATCY 2 cut(s) 1741, 2449
MhlI GDGCHC 6 cut(s) 349, 908, 1572, 2149, 2529, 2979
MlsI TGGCCA 2 cut(s) 1410, 2187
MluNI TGGCCA 2 cut(s) 1410, 2187
MlyI GAGTC 6 cut(s) 586, 629, 920, 1484, 2390, 2612
MmeI TCCRAC 5 cut(s) 695, 1096, 1270, 2077, 2265
Mox20I TGGCCA 2 cut(s) 1410, 2187
Mph1103I ATGCAT 1 cut(s) 730
MroNI GCCGGC 1 cut(s) 1273
MroXI GAANNNNTTC 2 cut(s) 234, 874
MscI TGGCCA 2 cut(s) 1410, 2187
MslI CAYNNNNRTG 2 cut(s) 1575, 3015
Msp20I TGGCCA 2 cut(s) 1410, 2187
MspA1I CMGCKG 2 cut(s) 1112, 2672
MspCI CTTAAG 2 cut(s) 1745, 2339
MspI CCGG 4 cut(s) 315, 1274, 1498, 2851
MspR9I CCNGG 6 cut(s) 803, 822, 1499, 1544, 2633, 3014
MunI CAATTG 2 cut(s) 335, 572
Mva1269I GAATGC 3 cut(s) 604, 2699, 3028
MvaI CCWGG 5 cut(s) 803, 822, 1544, 2633, 3014
MwoI GCNNNNNNNGC 7 cut(s) 221, 230, 608, 1202, 2587, 2741, 2822
NaeI GCCGGC 1 cut(s) 1275
NciI CCSGG 1 cut(s) 1499
NcoI CCATGG 1 cut(s) 2188
NdeI CATATG 1 cut(s) 652
NdeII GATC 9 cut(s) 966, 1723, 1741, 2328, 2416, 2449, 2782, 2866, 3135
NgoMIV GCCGGC 1 cut(s) 1273
NheI GCTAGC 2 cut(s) 469, 2875
NlaIV GGNNCC 5 cut(s) 954, 1541, 2172, 2959, 3051
NmuCI GTSAC 2 cut(s) 2108, 2470
NsiI ATGCAT 1 cut(s) 730
NspI RCATGY 3 cut(s) 215, 364, 1072
OliI CACNNNNGTG 1 cut(s) 1575
PaeI GCATGC 1 cut(s) 364
PaeR7I CTCGAG 2 cut(s) 2528, 2981
PagI TCATGA 2 cut(s) 406, 3143
PceI AGGCCT 1 cut(s) 2164
PciI ACATGT 1 cut(s) 1068
PcsI WCGNNNNNNNCGW 1 cut(s) 379
PctI GAATGC 3 cut(s) 604, 2699, 3028
PdiI GCCGGC 1 cut(s) 1275
PdmI GAANNNNTTC 2 cut(s) 234, 874
PfeI GAWTC 8 cut(s) 776, 875, 1121, 1208, 1703, 1785, 2267, 2345
PflFI GACNNNGTC 2 cut(s) 62, 2771
PfoI TCCNGGA 1 cut(s) 1542
Ple19I CGATCG 1 cut(s) 3138
PleI GAGTC 6 cut(s) 585, 628, 920, 1483, 2390, 2612
PpsI GAGTC 6 cut(s) 585, 628, 920, 1483, 2390, 2612
PpuMI RGGWCCY 1 cut(s) 824
PscI ACATGT 1 cut(s) 1068
PshAI GACNNNNGTC 1 cut(s) 2299
PsiI TTATAA 2 cut(s) 1809, 1926
Psp124BI GAGCTC 2 cut(s) 349, 2529
Psp5II RGGWCCY 1 cut(s) 824
Psp6I CCWGG 5 cut(s) 801, 820, 1542, 2631, 3012
PspFI CCCAGC 1 cut(s) 243
PspGI CCWGG 5 cut(s) 801, 820, 1542, 2631, 3012
PspN4I GGNNCC 5 cut(s) 954, 1541, 2172, 2959, 3051
PspPI GGNCC 4 cut(s) 824, 2224, 2853, 2957
PspPPI RGGWCCY 1 cut(s) 824
PstI CTGCAG 1 cut(s) 2583
PstNI CAGNNNCTG 3 cut(s) 827, 1700, 2270
PsuI RGATCY 2 cut(s) 1741, 2449
PsyI GACNNNGTC 2 cut(s) 62, 2771
PvuI CGATCG 1 cut(s) 3138
PvuII CAGCTG 1 cut(s) 2672
RsaI GTAC 1 cut(s) 1135
RsaNI GTAC 1 cut(s) 1134
RseI CAYNNNNRTG 2 cut(s) 1575, 3015
SacI GAGCTC 2 cut(s) 349, 2529
Sau3AI GATC 9 cut(s) 966, 1723, 1741, 2328, 2416, 2449, 2782, 2866, 3135
Sau96I GGNCC 4 cut(s) 824, 2224, 2853, 2957
SchI GAGTC 6 cut(s) 586, 629, 920, 1484, 2390, 2612
ScrFI CCNGG 6 cut(s) 803, 822, 1499, 1544, 2633, 3014
SduI GDGCHC 6 cut(s) 349, 908, 1572, 2149, 2529, 2979
SfaNI GCATC 8 cut(s) 301, 400, 715, 737, 1172, 1674, 2029, 2110
SfcI CTRYAG 3 cut(s) 33, 1158, 2579
Sfr274I CTCGAG 2 cut(s) 2528, 2981
SinI GGWCC 4 cut(s) 824, 2224, 2853, 2957
SlaI CTCGAG 2 cut(s) 2528, 2981
SmiI ATTTAAAT 1 cut(s) 3000
SmiMI CAYNNNNRTG 2 cut(s) 1575, 3015
SmlI CTYRAG 8 cut(s) 350, 668, 746, 1019, 1745, 2339, 2528, 2981
SmoI CTYRAG 8 cut(s) 350, 668, 746, 1019, 1745, 2339, 2528, 2981
SphI GCATGC 1 cut(s) 364
SseBI AGGCCT 1 cut(s) 2164
SsiI CCGC 3 cut(s) 814, 1112, 2848
SspMI CTAG 9 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516, 2876, 3054
SstI GAGCTC 2 cut(s) 349, 2529
StuI AGGCCT 1 cut(s) 2164
StyD4I CCNGG 6 cut(s) 801, 820, 1497, 1542, 2631, 3012
StyI CCWWGG 3 cut(s) 834, 2188, 2716
SwaI ATTTAAAT 1 cut(s) 3000
TaaI ACNGT 6 cut(s) 71, 1056, 1079, 1288, 1472, 2470
TaiI ACGT 1 cut(s) 1524
TaqI TCGA 7 cut(s) 382, 661, 2134, 2399, 2529, 2592, 2982
TauI GCSGC 1 cut(s) 2850
TfiI GAWTC 8 cut(s) 776, 875, 1121, 1208, 1703, 1785, 2267, 2345
TseFI GTSAC 2 cut(s) 2108, 2470
Tsp45I GTSAC 2 cut(s) 2108, 2470
Tth111I GACNNNGTC 2 cut(s) 62, 2771
Vha464I CTTAAG 2 cut(s) 1745, 2339
VpaK11BI GGWCC 4 cut(s) 824, 2224, 2853, 2957
XapI RAATTY 7 cut(s) 434, 704, 941, 1831, 1958, 2129, 2321
XbaI TCTAGA 1 cut(s) 2515
XceI RCATGY 3 cut(s) 215, 364, 1072
XhoI CTCGAG 2 cut(s) 2528, 2981
XmnI GAANNNNTTC 2 cut(s) 234, 874
XspI CTAG 9 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516, 2876, 3054
ZraI GACGTC 1 cut(s) 1522
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.