Rh2CG189300

Filament-like plant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0007037
Physical Location & Seq
Reverse (-)
17851558 .. 17857199
5642 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG189300.1

Sequence Viewer

Length: 2664 bp
ATGGATAAGGCGTGGCTATGGAGGAAGAAATCTACAGAGAAGCTGCCCATTGTTGCTGACAAAGTCAACGGTTCGTCAAAAGGAAATGAAGAAGAGATGGAGGCAATTCTTAATGAGAAGGCAGAGCTAGAGAAAGATTTGAAAGCTTTAAGTGATAAGCTGGCTTCAGCTCTCTCTGATTGTAAGAATAAAGATGAACTTGTGAAGAAACATGCCAACATGGCACAGGAAGCTGTTCAAGGCTGGGAGAAGGTAGAAGCAGAAGCAGGGTTTCTGAAGCAAGAATTAGATAAATCTTTGCAACTCAGAGATGCCGGTGAAGAAAGAATATCTCAATTGGATGGAGCTCTCAAGGAGTGCATGCAGCAGCTACGATATGTTCGAGATGAACAACAGCAAAGGGTTCATGATGCTGTGATGAAGACAACAAGGGAATTTGAGAAATCCCAGATGGTATTGGAAGAGAAGCTAGCAGAGACCAGTAAAAGGCTTTCTAAAATAGGTGCTGAAAACACCCATCTTAGCAAGGCTCTTTCAGTGAAGGAAAAGTTGACTGAAGATTTAAGAAAACAATTGAGTCAGATGGAAGCTGATTTGAATGCACTTATGGCTAGATTAGAGTCCACTGAGAAAGACAATGCTTCTTTGACATATGAGGTTCGAGTGCTTGAGAAAGAACTTGATATCAGGAATGAGGAGAGAGAATTTAATCGTCGGACTGCTGATGCATCACACAAGCAACACCTTGAGGGTGCAAAAAAAATTGCAAAGTTAGAATCAGAATGTCAGAGGTTGCGTCTCCTGGTCAGGAAGCGGTTGCCAGGTCCTGCTGCCTTGGTTAAAATGAAAAATGAAGTTGAAATGCTCGGAAGAGATTCTGTTGACATGAGGAGGAGAAGTTTGAGCCCAAATGGTTTAAGGTATGACTCTACTGCTGATAAATTTCCTGAGGCTCCCACCAAAAGGATCAATTTTCTAACCGAGCAGTTATGTGCTATGGAAGAAGAAAATGCAATTCTCAAGGAAGCACTCAATAAGAAGATGAATGAGTTACAGTTTTCCAAAAACATGTATAACCGTGCAGCCTCCAAATTATCACAAGTTGAAACAGCGGTTGGAGAATCCCCAAGAGGTACTCTTATGCCACATGAACCCTCTGTAGCATCTATGTCTGATATTGGTAGCGATGATAAGGCTAGTTGTGCAGAATCATGGGCTTCTGCTTTGATTACAGAACTGGAGCATTTTAGAAATGAAAAGCAAAAAGGCTTGCCGGCGTGCAAAACTGTTGGAGCTTCAGACATAAATCTGATGGATGACTTCGTTGAAATGGAAAAACTAGCAGTGGTCTCTGCTGATAAAGTAAGTGTTGGTTCTTATGCTTCCTCACCAGCTAATACATTTGCTGGCCATTTGGAAAATCAGTATTCCTCGGAACTAGGGGGTAGCGATATAGTTCCTGTATCTGACAGTGAGTCAGGCTTCAGTTTGTCAAACCGGGAGACCAGCCGTATTGTTGACGTCAAAGCTCCTCATTGGCTCCAGGATATAGTGAAATTGGTGTTAGAGCACAGCCGTGTTGCAGGAAGAAGCCCTGAACAAATACAAGAGGATATAAGAATAGCTTTGGCAACTACAACCAATCCTTCTTCTGCTAAAAGCTGCATCTCATGGAAAAGCTCAAATCAGTGTCCAGTAACTGATTCAACCAATGGAGTAAGTGATCAGCAGTTACAACCAGATCTTAAGAAATCAATATGCAAAATAATTGAGCTTATTGAAGGAATCAGTTTGCCATCTCCAGATTATAACACAGACGCCAGATACAAGAATTCAGAAACACAGGCAGGCTACATGGTTCGTGTTTTCCAGTGGAAAACTTCTGAACTTGGCACTCTTCTACAACAATTTGTTCATGCTTGTTATAATCTGTTAAATGGAAAGGCTGGTCTTGATAAATTTGCTGAAGAACTAACTACGGCTTTGGACTGGATTTTGAACCACTGCTTTTCACTTCAAGATGTTTCAAGCATGAAGGATGCAATTAAGAAGCAATTTGATTGGGATGATACACGAAGTGAAAGCGAGGCAGAAGTTGGAATGGTTGGTCACTATTCAGATGCAGACAAATTTCGAGTTCTCAGAGCACACACATCATTTAGGCCTATGGCTCCTTCTTCAAATGGCCATGGCAGTCAAATAGAAGAGTTGCAGTCCAATTTGGTCCAAGAAAACCAAAAGTTAAAGGATGAACTTGCGAATACAGAATCTGGCAAAAAAGAGTTGGAAGGCAGACTTCAGTCAGCCTGTGATAAGAGTGAATTCCTGATCAATCAGCTTAAGGAATCCGAGAAAATTATTGCCAGCTTGCAAGAAGAGTTACAAAGTTTAAGAGACTCGAAGAGTTTGATGGAGGATCAACTCAAAACTCAAAAGACAATGAATGAAGATCTTGACACGCAGCTCACAGTGACCAGAGTTGAATTGAGTGAAACTCATCAGAAGTTTTCATCTCTAGAAGATGAGCTCGAGAACAAATACAACTGCTGTGAAGAATTGGAAGCTTCATGCGTTGACCTGCAGCTTCAGCTCGAAAGTATGAAGACGAAAAGCCCTGACTCCAATCTTAACCAGGAGGAAAGGCAAGACCAAACTGTAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FPP

Protein Analysis

887

Amino Acids

99.85

Weight (kDa)

5.2

Isoelectric Point (pI)

51.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPP PF05911 64 - 884 7.1e-266 Filament-like plant protein, long coiled-coil
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1809, 1926
AatII GACGTC 1 cut(s) 1524
Acc36I ACCTGC 1 cut(s) 2586
AciI CCGC 2 cut(s) 814, 1112
AclWI GGATC 2 cut(s) 974, 2424
AcoI YGGCCR 2 cut(s) 1408, 2185
AcsI RAATTY 7 cut(s) 434, 704, 941, 1831, 1958, 2129, 2321
AcuI CTGAAG 8 cut(s) 150, 296, 576, 1281, 1468, 1986, 2282, 2570
AcyI GRCGYC 2 cut(s) 1521, 1818
AdeI CACNNNGTG 1 cut(s) 2078
AfaI GTAC 1 cut(s) 1135
AfiI CCNNNNNNNGG 2 cut(s) 486, 963
AflII CTTAAG 2 cut(s) 1745, 2339
AflIII ACRYGT 1 cut(s) 1068
AhdI GACNNNNNGTC 1 cut(s) 1474
AjnI CCWGG 4 cut(s) 801, 820, 1542, 2631
AjuI GAANNNNNNNTTGG 2 cut(s) 1098, 1130
AleI CACNNNNGTG 1 cut(s) 1575
Alw21I GWGCWC 4 cut(s) 349, 1572, 2149, 2529
Alw26I GTCTC 5 cut(s) 470, 803, 1354, 1496, 2388
AlwI GGATC 2 cut(s) 974, 2424
AlwNI CAGNNNCTG 3 cut(s) 827, 1700, 2270
Ama87I CYCGRG 1 cut(s) 2528
AoxI GGCC 3 cut(s) 1408, 2162, 2185
ApeKI GCWGC 8 cut(s) 43, 364, 367, 830, 1082, 1662, 2461, 2581
ApoI RAATTY 7 cut(s) 434, 704, 941, 1831, 1958, 2129, 2321
Asp700I GAANNNNTTC 2 cut(s) 234, 874
AspS9I GGNCC 2 cut(s) 824, 2224
AsuC2I CCSGG 1 cut(s) 1499
AsuHPI GGTGA 2 cut(s) 329, 1380
AsuNHI GCTAGC 1 cut(s) 469
AvaI CYCGRG 1 cut(s) 2528
AvaII GGWCC 2 cut(s) 824, 2224
AxyI CCTNAGG 1 cut(s) 948
BalI TGGCCA 2 cut(s) 1410, 2187
BanII GRGCYC 3 cut(s) 349, 908, 2529
BbsI GAAGAC 2 cut(s) 428, 2609
Bbv12I GWGCWC 4 cut(s) 349, 1572, 2149, 2529
BbvI GCAGC 8 cut(s) 30, 376, 379, 817, 1094, 1649, 2473, 2593
BccI CCATC 8 cut(s) 91, 335, 445, 525, 577, 1306, 1804, 2404
BceAI ACGGC 3 cut(s) 1494, 1560, 1995
BciT130I CCWGG 4 cut(s) 803, 822, 1544, 2633
BclI TGATCA 2 cut(s) 1723, 2328
BcnI CCSGG 1 cut(s) 1499
BcoDI GTCTC 5 cut(s) 470, 803, 1354, 1496, 2388
BfaI CTAG 7 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516
BfmI CTRYAG 3 cut(s) 33, 1158, 2579
BfrI CTTAAG 2 cut(s) 1745, 2339
BfuAI ACCTGC 1 cut(s) 2586
BglI GCCNNNNNGGC 1 cut(s) 221
BglII AGATCT 2 cut(s) 1741, 2449
BisI GCNGC 8 cut(s) 44, 365, 368, 831, 1083, 1663, 2462, 2582
BlsI GCNGC 8 cut(s) 45, 366, 369, 832, 1084, 1664, 2463, 2583
Bme1390I CCNGG 5 cut(s) 803, 822, 1499, 1544, 2633
Bme18I GGWCC 2 cut(s) 824, 2224
BmeRI GACNNNNNGTC 1 cut(s) 1474
BmeT110I CYCGRG 1 cut(s) 2528
BmgT120I GGNCC 2 cut(s) 824, 2224
BmiI GGNNCC 3 cut(s) 954, 1541, 2172
BmrFI CCNGG 5 cut(s) 803, 822, 1499, 1544, 2633
BmsI GCATC 8 cut(s) 301, 400, 715, 737, 1172, 1674, 2029, 2110
BmtI GCTAGC 1 cut(s) 473
BoxI GACNNNNGTC 1 cut(s) 2299
BpiI GAAGAC 2 cut(s) 428, 2609
BplI GAGNNNNNCTC 2 cut(s) 2479, 2511
BpmI CTGGAG 3 cut(s) 1259, 1526, 1785
BpuEI CTTGAG 4 cut(s) 335, 689, 767, 1004
BpuMI CCSGG 1 cut(s) 1499
BsaHI GRCGYC 2 cut(s) 1521, 1818
BsaI GGTCTC 3 cut(s) 470, 1354, 1496
BsaJI CCNNGG 3 cut(s) 834, 1431, 2188
BsaXI ACNNNNNCTCC 2 cut(s) 883, 913
Bsc4I CCNNNNNNNGG 2 cut(s) 486, 963
Bse118I RCCGGY 2 cut(s) 314, 1273
Bse1I ACTGG 5 cut(s) 480, 1242, 1694, 1870, 1994
Bse21I CCTNAGG 1 cut(s) 948
BseBI CCWGG 4 cut(s) 803, 822, 1544, 2633
BseDI CCNNGG 3 cut(s) 834, 1431, 2188
BseGI GGATG 5 cut(s) 346, 1321, 2044, 2071, 2254
BseLI CCNNNNNNNGG 2 cut(s) 486, 963
BseMII CTCAG 4 cut(s) 319, 618, 939, 2155
BseNI ACTGG 5 cut(s) 480, 1242, 1694, 1870, 1994
BseRI GAGGAG 4 cut(s) 710, 904, 907, 1521
BseXI GCAGC 8 cut(s) 30, 376, 379, 817, 1094, 1649, 2473, 2593
BseYI CCCAGC 1 cut(s) 243
BsgI GTGCAG 2 cut(s) 1101, 1224
BshFI GGCC 3 cut(s) 1410, 2164, 2187
BsiHKAI GWGCWC 4 cut(s) 349, 1572, 2149, 2529
BsiHKCI CYCGRG 1 cut(s) 2528
BsiSI CCGG 3 cut(s) 315, 1274, 1498
BslI CCNNNNNNNGG 2 cut(s) 486, 963
BsmAI GTCTC 5 cut(s) 470, 803, 1354, 1496, 2388
BsmBI CGTCTC 1 cut(s) 803
BsmI GAATGC 1 cut(s) 604
BsnI GGCC 3 cut(s) 1410, 2164, 2187
Bso31I GGTCTC 3 cut(s) 470, 1354, 1496
BsoBI CYCGRG 1 cut(s) 2528
Bsp1286I GDGCHC 5 cut(s) 349, 908, 1572, 2149, 2529
Bsp143I GATC 6 cut(s) 966, 1723, 1741, 2328, 2416, 2449
Bsp19I CCATGG 1 cut(s) 2188
BspACI CCGC 2 cut(s) 814, 1112
BspANI GGCC 3 cut(s) 1410, 2164, 2187
BspCNI CTCAG 4 cut(s) 318, 619, 940, 2154
BspHI TCATGA 1 cut(s) 406
BspLI GGNNCC 3 cut(s) 954, 1541, 2172
BspMAI CTGCAG 1 cut(s) 2583
BspMI ACCTGC 1 cut(s) 2586
BspOI GCTAGC 1 cut(s) 473
BspPI GGATC 2 cut(s) 974, 2424
BspTI CTTAAG 2 cut(s) 1745, 2339
BspTNI GGTCTC 3 cut(s) 470, 1354, 1496
BsrFI RCCGGY 2 cut(s) 314, 1273
BsrI ACTGG 5 cut(s) 480, 1242, 1694, 1870, 1994
BssAI RCCGGY 2 cut(s) 314, 1273
BssECI CCNNGG 3 cut(s) 834, 1431, 2188
BssMI GATC 6 cut(s) 966, 1723, 1741, 2328, 2416, 2449
BssNI GRCGYC 2 cut(s) 1521, 1818
BssT1I CCWWGG 2 cut(s) 834, 2188
Bst2UI CCWGG 4 cut(s) 803, 822, 1544, 2633
Bst4CI ACNGT 7 cut(s) 71, 1056, 1079, 1288, 1472, 2470, 2656
Bst6I CTCTTC 7 cut(s) 87, 456, 865, 1902, 2199, 2370, 2396
BstACI GRCGYC 2 cut(s) 1521, 1818
BstAFI CTTAAG 2 cut(s) 1745, 2339
BstDEI CTNAG 5 cut(s) 305, 521, 627, 948, 2141
BstDSI CCRYGG 1 cut(s) 2188
BstF5I GGATG 5 cut(s) 346, 1321, 2044, 2071, 2254
BstKTI GATC 6 cut(s) 969, 1726, 1744, 2331, 2419, 2452
BstMAI GTCTC 5 cut(s) 470, 803, 1354, 1496, 2388
BstMBI GATC 6 cut(s) 966, 1723, 1741, 2328, 2416, 2449
BstMWI GCNNNNNNNGC 5 cut(s) 221, 230, 608, 1202, 2587
BstNI CCWGG 4 cut(s) 803, 822, 1544, 2633
BstNSI RCATGY 3 cut(s) 215, 364, 1072
BstPAI GACNNNNGTC 1 cut(s) 2299
BstSCI CCNGG 5 cut(s) 801, 820, 1497, 1542, 2631
BstSFI CTRYAG 3 cut(s) 33, 1158, 2579
BstV1I GCAGC 8 cut(s) 30, 376, 379, 817, 1094, 1649, 2473, 2593
BstV2I GAAGAC 2 cut(s) 428, 2609
BstX2I RGATCY 2 cut(s) 1741, 2449
BstYI RGATCY 2 cut(s) 1741, 2449
Bsu36I CCTNAGG 1 cut(s) 948
BsuRI GGCC 3 cut(s) 1410, 2164, 2187
BtgI CCRYGG 1 cut(s) 2188
BtgZI GCGATG 1 cut(s) 1200
BtsCI GGATG 5 cut(s) 346, 1321, 2044, 2071, 2254
BtsI GCAGTG 2 cut(s) 1350, 2002
BtsIMutI CAGTG 8 cut(s) 543, 624, 1350, 1477, 1694, 1877, 2002, 2475
BveI ACCTGC 1 cut(s) 2586
CaiI CAGNNNCTG 3 cut(s) 827, 1700, 2270
CciI TCATGA 1 cut(s) 406
Cfr10I RCCGGY 2 cut(s) 314, 1273
Cfr13I GGNCC 2 cut(s) 824, 2224
CseI GACGC 2 cut(s) 785, 1826
Csp6I GTAC 1 cut(s) 1134
CviQI GTAC 1 cut(s) 1134
DdeI CTNAG 5 cut(s) 305, 521, 627, 948, 2141
DpnI GATC 6 cut(s) 968, 1725, 1743, 2330, 2418, 2451
DpnII GATC 6 cut(s) 966, 1723, 1741, 2328, 2416, 2449
DraIII CACNNNGTG 1 cut(s) 2078
DriI GACNNNNNGTC 1 cut(s) 1474
EaeI YGGCCR 2 cut(s) 1408, 2185
Eam1104I CTCTTC 7 cut(s) 87, 456, 865, 1902, 2199, 2370, 2396
Eam1105I GACNNNNNGTC 1 cut(s) 1474
EarI CTCTTC 7 cut(s) 87, 456, 865, 1902, 2199, 2370, 2396
Ecl136II GAGCTC 2 cut(s) 347, 2527
Eco130I CCWWGG 2 cut(s) 834, 2188
Eco147I AGGCCT 1 cut(s) 2164
Eco24I GRGCYC 3 cut(s) 349, 908, 2529
Eco31I GGTCTC 3 cut(s) 470, 1354, 1496
Eco32I GATATC 1 cut(s) 685
Eco47I GGWCC 2 cut(s) 824, 2224
Eco53kI GAGCTC 2 cut(s) 347, 2527
Eco57I CTGAAG 8 cut(s) 150, 296, 576, 1281, 1468, 1986, 2282, 2570
Eco81I CCTNAGG 1 cut(s) 948
Eco88I CYCGRG 1 cut(s) 2528
EcoICRI GAGCTC 2 cut(s) 347, 2527
EcoO109I RGGNCCY 1 cut(s) 824
EcoRI GAATTC 2 cut(s) 1831, 2321
EcoRII CCWGG 4 cut(s) 801, 820, 1542, 2631
EcoRV GATATC 1 cut(s) 685
EcoT14I CCWWGG 2 cut(s) 834, 2188
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 3 cut(s) 349, 908, 2529
ErhI CCWWGG 2 cut(s) 834, 2188
Esp3I CGTCTC 1 cut(s) 803
FalI AAGNNNNNCTT 6 cut(s) 183, 215, 1609, 1641, 2280, 2312
FauNDI CATATG 1 cut(s) 652
FbaI TGATCA 2 cut(s) 1723, 2328
Fnu4HI GCNGC 8 cut(s) 44, 365, 368, 831, 1083, 1663, 2462, 2582
FokI GGATG 5 cut(s) 353, 1328, 2051, 2078, 2261
FriOI GRGCYC 3 cut(s) 349, 908, 2529
Fsp4HI GCNGC 8 cut(s) 44, 365, 368, 831, 1083, 1663, 2462, 2582
FspBI CTAG 7 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516
GluI GCNGC 8 cut(s) 44, 365, 368, 831, 1083, 1663, 2462, 2582
GsaI CCCAGC 1 cut(s) 247
GsuI CTGGAG 3 cut(s) 1259, 1526, 1785
HaeIII GGCC 3 cut(s) 1410, 2164, 2187
HapII CCGG 3 cut(s) 315, 1274, 1498
HgaI GACGC 2 cut(s) 785, 1826
Hin1I GRCGYC 2 cut(s) 1521, 1818
HincII GTYRAC 5 cut(s) 67, 552, 883, 1519, 2575
HindII GTYRAC 5 cut(s) 67, 552, 883, 1519, 2575
HindIII AAGCTT 2 cut(s) 144, 2562
HpaII CCGG 3 cut(s) 315, 1274, 1498
HphI GGTGA 2 cut(s) 329, 1380
Hpy166II GTNNAC 6 cut(s) 67, 552, 624, 883, 1519, 2575
Hpy8I GTNNAC 6 cut(s) 67, 552, 624, 883, 1519, 2575
Hpy99I CGWCG 1 cut(s) 717
HpyAV CCTTC 8 cut(s) 112, 244, 535, 1656, 1775, 2029, 2184, 2282
HpyCH4III ACNGT 7 cut(s) 71, 1056, 1079, 1288, 1472, 2470, 2656
HpyCH4IV ACGT 1 cut(s) 1521
HpyF10VI GCNNNNNNNGC 5 cut(s) 221, 230, 608, 1202, 2587
HpyF3I CTNAG 5 cut(s) 305, 521, 627, 948, 2141
HpySE526I ACGT 1 cut(s) 1521
Hsp92I GRCGYC 2 cut(s) 1521, 1818
KroI GCCGGC 1 cut(s) 1273
KroNI GCCGGC 1 cut(s) 1275
Ksp22I TGATCA 2 cut(s) 1723, 2328
Kzo9I GATC 6 cut(s) 966, 1723, 1741, 2328, 2416, 2449
LmnI GCTCC 7 cut(s) 344, 958, 1240, 1292, 1534, 1545, 2176
Lsp1109I GCAGC 8 cut(s) 30, 376, 379, 817, 1094, 1649, 2473, 2593
LweI GCATC 8 cut(s) 301, 400, 715, 737, 1172, 1674, 2029, 2110
MaeI CTAG 7 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516
MaeII ACGT 1 cut(s) 1521
MaeIII GTNAC 6 cut(s) 1050, 1696, 1731, 2108, 2379, 2470
MalI GATC 6 cut(s) 968, 1725, 1743, 2330, 2418, 2451
MboI GATC 6 cut(s) 966, 1723, 1741, 2328, 2416, 2449
MfeI CAATTG 2 cut(s) 335, 572
MflI RGATCY 2 cut(s) 1741, 2449
MhlI GDGCHC 5 cut(s) 349, 908, 1572, 2149, 2529
MlsI TGGCCA 2 cut(s) 1410, 2187
MluNI TGGCCA 2 cut(s) 1410, 2187
MlyI GAGTC 6 cut(s) 586, 629, 920, 1484, 2390, 2612
MmeI TCCRAC 5 cut(s) 695, 1096, 1270, 2077, 2265
Mox20I TGGCCA 2 cut(s) 1410, 2187
Mph1103I ATGCAT 1 cut(s) 730
MroNI GCCGGC 1 cut(s) 1273
MroXI GAANNNNTTC 2 cut(s) 234, 874
MscI TGGCCA 2 cut(s) 1410, 2187
MslI CAYNNNNRTG 1 cut(s) 1575
Msp20I TGGCCA 2 cut(s) 1410, 2187
MspA1I CMGCKG 1 cut(s) 1112
MspCI CTTAAG 2 cut(s) 1745, 2339
MspI CCGG 3 cut(s) 315, 1274, 1498
MspR9I CCNGG 5 cut(s) 803, 822, 1499, 1544, 2633
MunI CAATTG 2 cut(s) 335, 572
Mva1269I GAATGC 1 cut(s) 604
MvaI CCWGG 4 cut(s) 803, 822, 1544, 2633
MwoI GCNNNNNNNGC 5 cut(s) 221, 230, 608, 1202, 2587
NaeI GCCGGC 1 cut(s) 1275
NciI CCSGG 1 cut(s) 1499
NcoI CCATGG 1 cut(s) 2188
NdeI CATATG 1 cut(s) 652
NdeII GATC 6 cut(s) 966, 1723, 1741, 2328, 2416, 2449
NgoMIV GCCGGC 1 cut(s) 1273
NheI GCTAGC 1 cut(s) 469
NlaIV GGNNCC 3 cut(s) 954, 1541, 2172
NmuCI GTSAC 2 cut(s) 2108, 2470
NsiI ATGCAT 1 cut(s) 730
NspI RCATGY 3 cut(s) 215, 364, 1072
OliI CACNNNNGTG 1 cut(s) 1575
PaeI GCATGC 1 cut(s) 364
PaeR7I CTCGAG 1 cut(s) 2528
PagI TCATGA 1 cut(s) 406
PceI AGGCCT 1 cut(s) 2164
PciI ACATGT 1 cut(s) 1068
PcsI WCGNNNNNNNCGW 1 cut(s) 379
PctI GAATGC 1 cut(s) 604
PdiI GCCGGC 1 cut(s) 1275
PdmI GAANNNNTTC 2 cut(s) 234, 874
PfeI GAWTC 8 cut(s) 776, 875, 1121, 1208, 1703, 1785, 2267, 2345
PflFI GACNNNGTC 1 cut(s) 62
PfoI TCCNGGA 1 cut(s) 1542
PkrI GCNGC 8 cut(s) 45, 366, 369, 832, 1084, 1664, 2463, 2583
PleI GAGTC 6 cut(s) 585, 628, 920, 1483, 2390, 2612
PpsI GAGTC 6 cut(s) 585, 628, 920, 1483, 2390, 2612
PpuMI RGGWCCY 1 cut(s) 824
PscI ACATGT 1 cut(s) 1068
PshAI GACNNNNGTC 1 cut(s) 2299
PsiI TTATAA 2 cut(s) 1809, 1926
Psp124BI GAGCTC 2 cut(s) 349, 2529
Psp5II RGGWCCY 1 cut(s) 824
Psp6I CCWGG 4 cut(s) 801, 820, 1542, 2631
PspFI CCCAGC 1 cut(s) 243
PspGI CCWGG 4 cut(s) 801, 820, 1542, 2631
PspN4I GGNNCC 3 cut(s) 954, 1541, 2172
PspPI GGNCC 2 cut(s) 824, 2224
PspPPI RGGWCCY 1 cut(s) 824
PstI CTGCAG 1 cut(s) 2583
PstNI CAGNNNCTG 3 cut(s) 827, 1700, 2270
PsuI RGATCY 2 cut(s) 1741, 2449
PsyI GACNNNGTC 1 cut(s) 62
RsaI GTAC 1 cut(s) 1135
RsaNI GTAC 1 cut(s) 1134
RseI CAYNNNNRTG 1 cut(s) 1575
SacI GAGCTC 2 cut(s) 349, 2529
SatI GCNGC 8 cut(s) 44, 365, 368, 831, 1083, 1663, 2462, 2582
Sau3AI GATC 6 cut(s) 966, 1723, 1741, 2328, 2416, 2449
Sau96I GGNCC 2 cut(s) 824, 2224
SchI GAGTC 6 cut(s) 586, 629, 920, 1484, 2390, 2612
ScrFI CCNGG 5 cut(s) 803, 822, 1499, 1544, 2633
SduI GDGCHC 5 cut(s) 349, 908, 1572, 2149, 2529
SfaNI GCATC 8 cut(s) 301, 400, 715, 737, 1172, 1674, 2029, 2110
SfcI CTRYAG 3 cut(s) 33, 1158, 2579
Sfr274I CTCGAG 1 cut(s) 2528
SinI GGWCC 2 cut(s) 824, 2224
SlaI CTCGAG 1 cut(s) 2528
SmiMI CAYNNNNRTG 1 cut(s) 1575
SmlI CTYRAG 7 cut(s) 350, 668, 746, 1019, 1745, 2339, 2528
SmoI CTYRAG 7 cut(s) 350, 668, 746, 1019, 1745, 2339, 2528
SphI GCATGC 1 cut(s) 364
SseBI AGGCCT 1 cut(s) 2164
SsiI CCGC 2 cut(s) 814, 1112
SspMI CTAG 7 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516
SstI GAGCTC 2 cut(s) 349, 2529
StuI AGGCCT 1 cut(s) 2164
StyD4I CCNGG 5 cut(s) 801, 820, 1497, 1542, 2631
StyI CCWWGG 2 cut(s) 834, 2188
TaaI ACNGT 7 cut(s) 71, 1056, 1079, 1288, 1472, 2470, 2656
TaiI ACGT 1 cut(s) 1524
TaqI TCGA 6 cut(s) 382, 661, 2134, 2399, 2529, 2592
TfiI GAWTC 8 cut(s) 776, 875, 1121, 1208, 1703, 1785, 2267, 2345
TscAI CASTG 8 cut(s) 543, 631, 1350, 1477, 1694, 1877, 2009, 2475
TseFI GTSAC 2 cut(s) 2108, 2470
TseI GCWGC 8 cut(s) 43, 364, 367, 830, 1082, 1662, 2461, 2581
Tsp45I GTSAC 2 cut(s) 2108, 2470
TspRI CASTG 8 cut(s) 543, 631, 1350, 1477, 1694, 1877, 2009, 2475
Tth111I GACNNNGTC 1 cut(s) 62
Vha464I CTTAAG 2 cut(s) 1745, 2339
VpaK11BI GGWCC 2 cut(s) 824, 2224
XapI RAATTY 7 cut(s) 434, 704, 941, 1831, 1958, 2129, 2321
XbaI TCTAGA 1 cut(s) 2515
XceI RCATGY 3 cut(s) 215, 364, 1072
XhoI CTCGAG 1 cut(s) 2528
XmnI GAANNNNTTC 2 cut(s) 234, 874
XspI CTAG 7 cut(s) 128, 470, 612, 1197, 1340, 1439, 2516
ZraI GACGTC 1 cut(s) 1522
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.