Filament-like plant protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23360 |
| fragaria_vesca | FvH4_1g16340 FvH4_1g16340 FvH4_1g16340 FvH4_1g16340 FvH4_1g16340 FvH4_1g16340 |
| malus_domestica | MD02G1175900.v1.1 MD15G1286300.v1.1 |
| prunus_persica | Prupe.6G231800_v2.0.a1 Prupe.6G231800_v2.0.a1 Prupe.6G231800_v2.0.a1 |
| pyrus_communis | pycom02g14180 pycom15g24960 |
| rosa_chinensis | RchiOBHm_Chr2g0106201 |
| rosa_laevigata | RLG00000000199 |
| rosa_multiflora | Rmu_sc0007100.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00137380 |
| rosa_rugosa | Rorug02G0133300 Rorug02G0133300 |
| rosa_samantha | Rh2AG184400 Rh2BG194900 Rh2CG189300 Rh2DG190800 |
| rosa_wichuraiana | Rw2G014400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1947 |
| AccB1I | GGYRCC | 1 cut(s) | 1451 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1958 |
| AccIII | TCCGGA | 2 cut(s) | 705, 825 |
| AciI | CCGC | 3 cut(s) | 284, 832, 1130 |
| AclWI | GGATC | 3 cut(s) | 697, 1321, 2780 |
| AcoI | YGGCCR | 3 cut(s) | 2347, 2634, 2850 |
| AcsI | RAATTY | 4 cut(s) | 452, 722, 1996, 2779 |
| AcuI | CTGAAG | 5 cut(s) | 168, 891, 1416, 2732, 2823 |
| AdeI | CACNNNGTG | 3 cut(s) | 1820, 2240, 2599 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 53, 504, 712, 981, 1958 |
| AflII | CTTAAG | 1 cut(s) | 2501 |
| AflIII | ACRYGT | 2 cut(s) | 1086, 2296 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1516 |
| AjnI | CCWGG | 6 cut(s) | 762, 819, 838, 1699, 1964, 2733 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1595, 1627 |
| AleI | CACNNNNGTG | 1 cut(s) | 1623 |
| Alw21I | GWGCWC | 3 cut(s) | 1290, 1620, 2136 |
| Alw26I | GTCTC | 8 cut(s) | 488, 821, 962, 1194, 1204, 1538, 2550, 2858 |
| AlwI | GGATC | 3 cut(s) | 697, 1321, 2780 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 845, 2258 |
| Ama87I | CYCGRG | 1 cut(s) | 2879 |
| Aor13HI | TCCGGA | 2 cut(s) | 705, 825 |
| AoxI | GGCC | 5 cut(s) | 1150, 2347, 2376, 2634, 2850 |
| ApoI | RAATTY | 4 cut(s) | 452, 722, 1996, 2779 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 72, 104 |
| AspS9I | GGNCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| AsuHPI | GGTGA | 6 cut(s) | 1612, 1715, 1806, 2066, 2431, 2611 |
| AsuNHI | GCTAGC | 1 cut(s) | 1384 |
| AvaI | CYCGRG | 1 cut(s) | 2879 |
| AvaII | GGWCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| BaeGI | GKGCMC | 1 cut(s) | 2328 |
| BalI | TGGCCA | 2 cut(s) | 2349, 2636 |
| BanI | GGYRCC | 1 cut(s) | 1451 |
| BanII | GRGCYC | 1 cut(s) | 2136 |
| BauI | CACGAG | 3 cut(s) | 333, 625, 1191 |
| BbsI | GAAGAC | 2 cut(s) | 81, 446 |
| Bbv12I | GWGCWC | 3 cut(s) | 1290, 1620, 2136 |
| BbvCI | CCTCAGC | 1 cut(s) | 1474 |
| BccI | CCATC | 7 cut(s) | 463, 543, 1351, 1489, 1562, 1942, 1967 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1315, 1349 |
| BciT130I | CCWGG | 6 cut(s) | 764, 821, 840, 1701, 1966, 2735 |
| BcoDI | GTCTC | 8 cut(s) | 488, 821, 962, 1194, 1204, 1538, 2550, 2858 |
| BfaI | CTAG | 4 cut(s) | 884, 1080, 1385, 1802 |
| BfmI | CTRYAG | 4 cut(s) | 1203, 2372, 2520, 2741 |
| BfrI | CTTAAG | 1 cut(s) | 2501 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 239 |
| BglII | AGATCT | 3 cut(s) | 1796, 1879, 2611 |
| Bme1390I | CCNGG | 6 cut(s) | 764, 821, 840, 1701, 1966, 2735 |
| Bme18I | GGWCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1516 |
| BmeT110I | CYCGRG | 1 cut(s) | 2879 |
| BmgT120I | GGNCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| BmiI | GGNNCC | 4 cut(s) | 1167, 1453, 1500, 1963 |
| BmrFI | CCNGG | 6 cut(s) | 764, 821, 840, 1701, 1966, 2735 |
| BmrI | ACTGGG | 1 cut(s) | 1812 |
| BmtI | GCTAGC | 1 cut(s) | 1388 |
| BmuI | ACTGGG | 1 cut(s) | 1812 |
| BpiI | GAAGAC | 2 cut(s) | 81, 446 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1457, 1489 |
| BpmI | CTGGAG | 7 cut(s) | 167, 785, 1055, 1304, 1923, 2280, 2711 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1474 |
| BpuEI | CTTGAG | 6 cut(s) | 353, 707, 719, 1022, 1676, 1828 |
| BsaAI | YACGTR | 1 cut(s) | 2297 |
| BsaBI | GATNNNNATC | 2 cut(s) | 637, 2790 |
| BsaI | GGTCTC | 2 cut(s) | 488, 1538 |
| BsaJI | CCNNGG | 7 cut(s) | 14, 852, 1161, 1455, 1624, 2878, 2909 |
| BsaWI | WCCGGW | 2 cut(s) | 705, 825 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 53, 504, 712, 981, 1958 |
| Bse3DI | GCAATG | 2 cut(s) | 2164, 2904 |
| Bse8I | GATNNNNATC | 2 cut(s) | 637, 2790 |
| BseAI | TCCGGA | 2 cut(s) | 705, 825 |
| BseBI | CCWGG | 6 cut(s) | 764, 821, 840, 1701, 1966, 2735 |
| BseDI | CCNNGG | 7 cut(s) | 14, 852, 1161, 1455, 1624, 2878, 2909 |
| BseGI | GGATG | 9 cut(s) | 364, 1366, 1679, 1745, 1978, 2233, 2355, 2416, 2672 |
| BseJI | GATNNNNATC | 2 cut(s) | 637, 2790 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 53, 504, 712, 981, 1958 |
| BseMI | GCAATG | 2 cut(s) | 2164, 2904 |
| BseMII | CTCAG | 8 cut(s) | 123, 611, 636, 957, 1455, 1488, 1874, 2636 |
| BseRI | GAGGAG | 6 cut(s) | 494, 728, 922, 925, 1189, 1870 |
| BseSI | GKGCMC | 1 cut(s) | 2328 |
| BseYI | CCCAGC | 2 cut(s) | 261, 974 |
| BsgI | GTGCAG | 2 cut(s) | 1650, 2889 |
| BshFI | GGCC | 5 cut(s) | 1152, 2349, 2378, 2636, 2852 |
| BshNI | GGYRCC | 1 cut(s) | 1451 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1290, 1620, 2136 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2879 |
| BsiSI | CCGG | 2 cut(s) | 706, 826 |
| BslFI | GGGAC | 1 cut(s) | 1975 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 53, 504, 712, 981, 1958 |
| BsmAI | GTCTC | 8 cut(s) | 488, 821, 962, 1194, 1204, 1538, 2550, 2858 |
| BsmBI | CGTCTC | 1 cut(s) | 821 |
| BsmFI | GGGAC | 1 cut(s) | 1975 |
| BsmI | GAATGC | 1 cut(s) | 2861 |
| BsnI | GGCC | 5 cut(s) | 1152, 2349, 2378, 2636, 2852 |
| Bso31I | GGTCTC | 2 cut(s) | 488, 1538 |
| BsoBI | CYCGRG | 1 cut(s) | 2879 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1290, 1620, 2136, 2328 |
| Bsp13I | TCCGGA | 2 cut(s) | 705, 825 |
| Bsp143I | GATC | 8 cut(s) | 702, 1313, 1796, 1879, 2056, 2089, 2611, 2785 |
| Bsp19I | CCATGG | 2 cut(s) | 14, 1161 |
| BspACI | CCGC | 3 cut(s) | 284, 832, 1130 |
| BspANI | GGCC | 5 cut(s) | 1152, 2349, 2378, 2636, 2852 |
| BspCNI | CTCAG | 8 cut(s) | 124, 610, 637, 958, 1456, 1487, 1875, 2635 |
| BspEI | TCCGGA | 2 cut(s) | 705, 825 |
| BspHI | TCATGA | 1 cut(s) | 424 |
| BspLI | GGNNCC | 4 cut(s) | 1167, 1453, 1500, 1963 |
| BspMAI | CTGCAG | 1 cut(s) | 2376 |
| BspOI | GCTAGC | 1 cut(s) | 1388 |
| BspPI | GGATC | 3 cut(s) | 697, 1321, 2780 |
| BspT107I | GGYRCC | 1 cut(s) | 1451 |
| BspTI | CTTAAG | 1 cut(s) | 2501 |
| BspTNI | GGTCTC | 2 cut(s) | 488, 1538 |
| BsrDI | GCAATG | 2 cut(s) | 2164, 2904 |
| BssECI | CCNNGG | 7 cut(s) | 14, 852, 1161, 1455, 1624, 2878, 2909 |
| BssMI | GATC | 8 cut(s) | 702, 1313, 1796, 1879, 2056, 2089, 2611, 2785 |
| BssSI | CACGAG | 3 cut(s) | 333, 625, 1191 |
| BssT1I | CCWWGG | 5 cut(s) | 14, 852, 1161, 1455, 2909 |
| Bst2BI | CACGAG | 3 cut(s) | 333, 625, 1191 |
| Bst2UI | CCWGG | 6 cut(s) | 764, 821, 840, 1701, 1966, 2735 |
| Bst4CI | ACNGT | 8 cut(s) | 731, 952, 1333, 1514, 1625, 2217, 2313, 2632 |
| BstAFI | CTTAAG | 1 cut(s) | 2501 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2903 |
| BstBAI | YACGTR | 1 cut(s) | 2297 |
| BstC8I | GCNNGC | 5 cut(s) | 180, 1386, 2376, 2659, 2808 |
| BstDSI | CCRYGG | 3 cut(s) | 14, 1161, 1624 |
| BstF5I | GGATG | 9 cut(s) | 364, 1366, 1679, 1745, 1978, 2233, 2355, 2416, 2672 |
| BstKTI | GATC | 8 cut(s) | 705, 1316, 1799, 1882, 2059, 2092, 2614, 2788 |
| BstMAI | GTCTC | 8 cut(s) | 488, 821, 962, 1194, 1204, 1538, 2550, 2858 |
| BstMBI | GATC | 8 cut(s) | 702, 1313, 1796, 1879, 2056, 2089, 2611, 2785 |
| BstNI | CCWGG | 6 cut(s) | 764, 821, 840, 1701, 1966, 2735 |
| BstNSI | RCATGY | 3 cut(s) | 233, 1090, 2733 |
| BstSCI | CCNGG | 6 cut(s) | 762, 819, 838, 1699, 1964, 2733 |
| BstSFI | CTRYAG | 4 cut(s) | 1203, 2372, 2520, 2741 |
| BstSLI | GKGCMC | 1 cut(s) | 2328 |
| BstV2I | GAAGAC | 2 cut(s) | 81, 446 |
| BstX2I | RGATCY | 4 cut(s) | 702, 1796, 1879, 2611 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 21 |
| BstYI | RGATCY | 4 cut(s) | 702, 1796, 1879, 2611 |
| BsuRI | GGCC | 5 cut(s) | 1152, 2349, 2378, 2636, 2852 |
| BtgI | CCRYGG | 3 cut(s) | 14, 1161, 1624 |
| BtgZI | GCGATG | 1 cut(s) | 1245 |
| BtsCI | GGATG | 9 cut(s) | 364, 1366, 1679, 1745, 1978, 2233, 2355, 2416, 2672 |
| BtsI | GCAGTG | 1 cut(s) | 1395 |
| BtsIMutI | CAGTG | 8 cut(s) | 561, 642, 1395, 1519, 1825, 1933, 2039, 2637 |
| Cac8I | GCNNGC | 5 cut(s) | 180, 1386, 2376, 2659, 2808 |
| CaiI | CAGNNNCTG | 2 cut(s) | 845, 2258 |
| CciI | TCATGA | 1 cut(s) | 424 |
| Cfr13I | GGNCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| CseI | GACGC | 1 cut(s) | 803 |
| DpnI | GATC | 8 cut(s) | 704, 1315, 1798, 1881, 2058, 2091, 2613, 2787 |
| DpnII | GATC | 8 cut(s) | 702, 1313, 1796, 1879, 2056, 2089, 2611, 2785 |
| DraI | TTTAAA | 2 cut(s) | 1555, 2160 |
| DraIII | CACNNNGTG | 3 cut(s) | 1820, 2240, 2599 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1516 |
| EaeI | YGGCCR | 3 cut(s) | 2347, 2634, 2850 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1516 |
| Ecl136II | GAGCTC | 1 cut(s) | 2134 |
| Eco130I | CCWWGG | 5 cut(s) | 14, 852, 1161, 1455, 2909 |
| Eco24I | GRGCYC | 1 cut(s) | 2136 |
| Eco31I | GGTCTC | 2 cut(s) | 488, 1538 |
| Eco47I | GGWCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| Eco53kI | GAGCTC | 1 cut(s) | 2134 |
| Eco57I | CTGAAG | 5 cut(s) | 168, 891, 1416, 2732, 2823 |
| Eco88I | CYCGRG | 1 cut(s) | 2879 |
| EcoICRI | GAGCTC | 1 cut(s) | 2134 |
| EcoO109I | RGGNCCY | 1 cut(s) | 842 |
| EcoRI | GAATTC | 2 cut(s) | 722, 1996 |
| EcoRII | CCWGG | 6 cut(s) | 762, 819, 838, 1699, 1964, 2733 |
| EcoT14I | CCWWGG | 5 cut(s) | 14, 852, 1161, 1455, 2909 |
| EcoT22I | ATGCAT | 3 cut(s) | 661, 748, 1747 |
| EcoT38I | GRGCYC | 1 cut(s) | 2136 |
| ErhI | CCWWGG | 5 cut(s) | 14, 852, 1161, 1455, 2909 |
| Esp3I | CGTCTC | 1 cut(s) | 821 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 201, 233, 551, 583, 2906, 2938 |
| FaqI | GGGAC | 1 cut(s) | 1975 |
| FauI | CCCGC | 1 cut(s) | 277 |
| FokI | GGATG | 9 cut(s) | 371, 1373, 1666, 1732, 1985, 2240, 2342, 2423, 2659 |
| FriOI | GRGCYC | 1 cut(s) | 2136 |
| FspBI | CTAG | 4 cut(s) | 884, 1080, 1385, 1802 |
| GsaI | CCCAGC | 2 cut(s) | 265, 978 |
| GsuI | CTGGAG | 7 cut(s) | 167, 785, 1055, 1304, 1923, 2280, 2711 |
| HaeIII | GGCC | 5 cut(s) | 1152, 2349, 2378, 2636, 2852 |
| HapII | CCGG | 2 cut(s) | 706, 826 |
| HgaI | GACGC | 1 cut(s) | 803 |
| HincII | GTYRAC | 3 cut(s) | 85, 901, 988 |
| HindII | GTYRAC | 3 cut(s) | 85, 901, 988 |
| HindIII | AAGCTT | 2 cut(s) | 176, 312 |
| HpaI | GTTAAC | 1 cut(s) | 988 |
| HpaII | CCGG | 2 cut(s) | 706, 826 |
| HphI | GGTGA | 6 cut(s) | 1612, 1715, 1806, 2066, 2431, 2611 |
| Hpy166II | GTNNAC | 5 cut(s) | 85, 901, 988, 1837, 1986 |
| Hpy8I | GTNNAC | 5 cut(s) | 85, 901, 988, 1837, 1986 |
| Hpy99I | CGWCG | 2 cut(s) | 735, 2307 |
| HpyAV | CCTTC | 8 cut(s) | 130, 262, 553, 1764, 1963, 2360, 2444, 2887 |
| HpyCH4III | ACNGT | 8 cut(s) | 731, 952, 1333, 1514, 1625, 2217, 2313, 2632 |
| HpyCH4IV | ACGT | 2 cut(s) | 87, 2296 |
| HpySE526I | ACGT | 2 cut(s) | 87, 2296 |
| Kpn2I | TCCGGA | 2 cut(s) | 705, 825 |
| KspAI | GTTAAC | 1 cut(s) | 988 |
| Kzo9I | GATC | 8 cut(s) | 702, 1313, 1796, 1879, 2056, 2089, 2611, 2785 |
| LmnI | GCTCC | 7 cut(s) | 56, 412, 1165, 1285, 1337, 1582, 1615 |
| MaeI | CTAG | 4 cut(s) | 884, 1080, 1385, 1802 |
| MaeII | ACGT | 2 cut(s) | 87, 2296 |
| MaeIII | GTNAC | 4 cut(s) | 200, 1804, 2270, 2541 |
| MalI | GATC | 8 cut(s) | 704, 1315, 1798, 1881, 2058, 2091, 2613, 2787 |
| MboI | GATC | 8 cut(s) | 702, 1313, 1796, 1879, 2056, 2089, 2611, 2785 |
| MfeI | CAATTG | 3 cut(s) | 353, 590, 1582 |
| MflI | RGATCY | 4 cut(s) | 702, 1796, 1879, 2611 |
| MhlI | GDGCHC | 4 cut(s) | 1290, 1620, 2136, 2328 |
| MlsI | TGGCCA | 2 cut(s) | 2349, 2636 |
| MluNI | TGGCCA | 2 cut(s) | 2349, 2636 |
| MlyI | GAGTC | 6 cut(s) | 589, 938, 964, 1027, 1526, 2552 |
| MmeI | TCCRAC | 4 cut(s) | 34, 1315, 1593, 2427 |
| Mox20I | TGGCCA | 2 cut(s) | 2349, 2636 |
| Mph1103I | ATGCAT | 3 cut(s) | 661, 748, 1747 |
| MroI | TCCGGA | 2 cut(s) | 705, 825 |
| MscI | TGGCCA | 2 cut(s) | 2349, 2636 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1623, 1740 |
| Msp20I | TGGCCA | 2 cut(s) | 2349, 2636 |
| MspA1I | CMGCKG | 1 cut(s) | 2834 |
| MspCI | CTTAAG | 1 cut(s) | 2501 |
| MspI | CCGG | 2 cut(s) | 706, 826 |
| MspR9I | CCNGG | 6 cut(s) | 764, 821, 840, 1701, 1966, 2735 |
| MunI | CAATTG | 3 cut(s) | 353, 590, 1582 |
| Mva1269I | GAATGC | 1 cut(s) | 2861 |
| MvaI | CCWGG | 6 cut(s) | 764, 821, 840, 1701, 1966, 2735 |
| NcoI | CCATGG | 2 cut(s) | 14, 1161 |
| NdeII | GATC | 8 cut(s) | 702, 1313, 1796, 1879, 2056, 2089, 2611, 2785 |
| NheI | GCTAGC | 1 cut(s) | 1384 |
| NlaIV | GGNNCC | 4 cut(s) | 1167, 1453, 1500, 1963 |
| NmuCI | GTSAC | 1 cut(s) | 2270 |
| NsiI | ATGCAT | 3 cut(s) | 661, 748, 1747 |
| NspI | RCATGY | 3 cut(s) | 233, 1090, 2733 |
| OliI | CACNNNNGTG | 1 cut(s) | 1623 |
| PagI | TCATGA | 1 cut(s) | 424 |
| PciI | ACATGT | 1 cut(s) | 1086 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 397, 2302 |
| PctI | GAATGC | 1 cut(s) | 2861 |
| PflFI | GACNNNGTC | 1 cut(s) | 80 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1958 |
| PleI | GAGTC | 6 cut(s) | 589, 938, 964, 1027, 1525, 2552 |
| PpsI | GAGTC | 6 cut(s) | 589, 938, 964, 1027, 1525, 2552 |
| Ppu21I | YACGTR | 1 cut(s) | 2297 |
| PpuMI | RGGWCCY | 1 cut(s) | 842 |
| PscI | ACATGT | 1 cut(s) | 1086 |
| PsiI | TTATAA | 1 cut(s) | 1947 |
| Psp124BI | GAGCTC | 1 cut(s) | 2136 |
| Psp5II | RGGWCCY | 1 cut(s) | 842 |
| Psp6I | CCWGG | 6 cut(s) | 762, 819, 838, 1699, 1964, 2733 |
| PspFI | CCCAGC | 2 cut(s) | 261, 974 |
| PspGI | CCWGG | 6 cut(s) | 762, 819, 838, 1699, 1964, 2733 |
| PspN4I | GGNNCC | 4 cut(s) | 1167, 1453, 1500, 1963 |
| PspPI | GGNCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| PspPPI | RGGWCCY | 1 cut(s) | 842 |
| PstI | CTGCAG | 1 cut(s) | 2376 |
| PstNI | CAGNNNCTG | 2 cut(s) | 845, 2258 |
| PsuI | RGATCY | 4 cut(s) | 702, 1796, 1879, 2611 |
| PsyI | GACNNNGTC | 1 cut(s) | 80 |
| PvuII | CAGCTG | 1 cut(s) | 2834 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1623, 1740 |
| SacI | GAGCTC | 1 cut(s) | 2136 |
| Sau3AI | GATC | 8 cut(s) | 702, 1313, 1796, 1879, 2056, 2089, 2611, 2785 |
| Sau96I | GGNCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| SchI | GAGTC | 6 cut(s) | 589, 938, 964, 1027, 1526, 2552 |
| ScrFI | CCNGG | 6 cut(s) | 764, 821, 840, 1701, 1966, 2735 |
| SduI | GDGCHC | 4 cut(s) | 1290, 1620, 2136, 2328 |
| SfcI | CTRYAG | 4 cut(s) | 1203, 2372, 2520, 2741 |
| SinI | GGWCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1623, 1740 |
| SmlI | CTYRAG | 7 cut(s) | 368, 686, 698, 1037, 1655, 1843, 2501 |
| SmoI | CTYRAG | 7 cut(s) | 368, 686, 698, 1037, 1655, 1843, 2501 |
| SsiI | CCGC | 3 cut(s) | 284, 832, 1130 |
| SspI | AATATT | 1 cut(s) | 1561 |
| SspMI | CTAG | 4 cut(s) | 884, 1080, 1385, 1802 |
| SstI | GAGCTC | 1 cut(s) | 2136 |
| StyD4I | CCNGG | 6 cut(s) | 762, 819, 838, 1699, 1964, 2733 |
| StyI | CCWWGG | 5 cut(s) | 14, 852, 1161, 1455, 2909 |
| TaaI | ACNGT | 8 cut(s) | 731, 952, 1333, 1514, 1625, 2217, 2313, 2632 |
| TaiI | ACGT | 2 cut(s) | 90, 2299 |
| TaqI | TCGA | 4 cut(s) | 400, 679, 733, 2302 |
| TscAI | CASTG | 8 cut(s) | 561, 649, 1395, 1519, 1825, 1933, 2039, 2637 |
| TseFI | GTSAC | 1 cut(s) | 2270 |
| Tsp45I | GTSAC | 1 cut(s) | 2270 |
| TspGWI | ACGGA | 1 cut(s) | 1292 |
| TspRI | CASTG | 8 cut(s) | 561, 649, 1395, 1519, 1825, 1933, 2039, 2637 |
| Tth111I | GACNNNGTC | 1 cut(s) | 80 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1958 |
| Vha464I | CTTAAG | 1 cut(s) | 2501 |
| VpaK11BI | GGWCC | 5 cut(s) | 4, 823, 842, 1962, 2578 |
| XapI | RAATTY | 4 cut(s) | 452, 722, 1996, 2779 |
| XbaI | TCTAGA | 1 cut(s) | 1079 |
| XceI | RCATGY | 3 cut(s) | 233, 1090, 2733 |
| XspI | CTAG | 4 cut(s) | 884, 1080, 1385, 1802 |
| Zsp2I | ATGCAT | 3 cut(s) | 661, 748, 1747 |