MD15G1286300.v1.1

Filament-like plant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0007037
Physical Location & Seq
Reverse (-)
26121359 .. 26127438
6080 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1286300.v1.1.491

Sequence Viewer

Length: 3216 bp
ATGGACCACAAGCCTTGGCTTTGGAGGAAGAAATCTGCAGATAAAACCAATGCAGCTGCAGCAGCAGGAGACAATTTGAGTGTCTCAGTCAAAGTAAAGGAGGAAGAGATAGAGGCACTTCAGGCTGAGAAGGCAGAGTTGGAGAACAACCTGAAAACCCTCAGTGATAAGCTTGCTTCAGCTCTCTCTGAATGTAACAGTAAAGATGCACTTGTGAAAAAACATGCCAAAATGGCACAGGAAGCTGTTCAAGGCTGGGAGAAGGTAGAAGCAGATGCAGGATTTCTGAAGCATGAATTGGATAAAGCTTTCCAAGTCAGAGCAGCTGGCGAAGAAAGAATAGCTCAATTGGATGGAGCCCTCAAGGAATGCATGCAGCAGCTACGATTTGTTCGAGAAGAACAAGAACAAAGGGTTCATGAGGCTATGATGAAGACATCAAGAGAATTCGAGAAATCGCAGATAGTGTTGGAGGAGAAGTTAGCAGAGGCCACTAGAAGGGTTTCTAAAATTGGTGCTGAAAACACCCATCTAAGTAACACTCTTTTAGTGAAGGAGAAGTTGATAGAAGATTTAAGAAAACAATTGACAAAGGTGGAAGCTGATTTCAATGCACTCACGACTAGATTAGAATCCACTGAGAAAGATAATGCTTCTTTGAAATATGAGGTTCGGGTGCTTGAGAAAGAGCTTGAGATCCGGAATGAAGAGAGAGAATTCAATCGTCGAACCGCTGATGCATCACACAAGCAGAACTTGGAGGGTGCAAAGAAAATTGCAAAGTTAGAATCAGAATGTCAGAGGTTGCGGCTCCTAGTCCGGAAGCGGTTGCCAGGCCCTGCTGCTCTGGCAAAAATGAAAATTGAAGTGGAAATGCTAGGACGGGACTCTGTTGACATGGGGAGGAGAAAGTTGAATGACTCTAGAGTTGATAACTTTCCTGAGACTCCCAACAAAAAGGTTAACATTTTGACGGAGCAGTTATGTGCTATGGGAGAAGAAAACCAGACTCTCAAGGAAGCACTCAATAAAAAGATAAATGAACTCCAGTTCTCTAGAAACATGTATGCCCGTGTAGCTTCTAAATTATCGCAATCTGAAACACCACATGAAGAATCGTTAAAAGGCCAGGAAACCATGGAGTCAATGAGGAGTAGTCTTATGTCACATGAAGTCTCCGTAGCATCTATGTCTGATATTGGCAGCGATGATAAGGTTAGCTGTGCTGATTCATGGGCATCTGCCTTGATTACGGAACTGGAGCACTTTAGAACTGAAAAACAAAAAGGGTCTCTGACAAGCAAAACTGTCGGAGCTTCAGACATAAATCTGATGGATGACTTTGTTGAAATGGAAAAATTAGCAGTTGTTTCTGCTGATAAACAAAGTTTCGGTTCTCCTGTTCCTTCAGTTAAGGCATTCGTTGCACCCTTGGAAACGGAGTATTCCTCCGAACTTTTGGGTAGCAAGATGGTCCCTATTTCTGACAGTGAGTCAGGCTTCAGTTTGTCAAACAGGGAGAAGAGGTTTAACAACATTGTCGATGGCAAAGCTCCTCATTGGGTTGAGGATATAGTGAAACTGGTGGTGGAGCACAACCGTGTTGCAGGAAGAAACCCTGAACAGATACTTGAGGATATAAGAATAGCTTTGGCATGTACAGAAGATCCAAAGCCATGTGAATTGGTTAATGCGAGGACAAATGGAAGCCATTTTGAGGCATTGGATCCTTCCTCCGTTAAGAGCTGCACCTCATGGAAAGGTTCAGATAGATCTCTAGTAACTGATTCACCCAGAGGAGTAAGTGACGTGGACATCTCAAGCTCACAGAAGGGTAATCTGCAGTTCCAGCCAGATCTGAGTAAGTCCATTTGTAAAGTAATTGAGCTTATTGAAGGAATCAATGTGCCATCTCCAGATTATAACCCAGAGAATGGGTCCAGGAAGGATGGGAATGTGTCCACATATATAAATTCGGAAAACGCAGGCTACATAGTTCGTGTTTTCCAGTGGAAAACTTCTGAACTCAGTGATCTTCTACAACGGTTTGTTCATGCGTGCTATGATCTATTGAATGGAAAGGCTGGTCTTGAAAAATTTGCTGAAGAATTAACTGCAGCTTTGGATTGGATTTTAAATCACTGCTTTTCGCTTCAAGACGTTTCAAGCATGAAGGATGCAATTAAGAAGGAATTTGATTGGGATGATGCACGAAGTGAAACTGAAACAGAAGTTGGAGTAGTTGGTCACTTTTCAAATGGCCATAGTATACAAATAGAAGAGCTGCAGGCCAATCTGGTCAAAGAAAACAGAAAATTAAAGAATGAATTGGTGAATTTAGAATCTGAAAGGAGAGAGTTGGAAGGGAGACTTCAGTCGGCTAGTGATAAGAGCGAATACCTGATGAACCAGCTCAAGGAATCTGAAAAAGCTATTGCCAGCTTGAGAACAGAGTTACAAGGTTTACGAGAGTCAAAGGAAATTGTTGAAGACCAGATTAAAAATCACCAGGTGATGAATGAAGATCTTGAAACGCAGCTTACGGAGGCCAGAGTTGAATTAAGTGAAGCTCACCAAAAGTTTTCGTCCCTAGAAGTTCAACTGATGAATAAAAAAAATTGCTGTGTAGAGTTGGAGGCTACATGCTTGGAACTACAGCTTCGGCTTGATAGTGTGAAGAAGAAAAGCTCAAATTCTGATCTCCATCACGAGGAAAGGCAAGCCCAAAATGATTGGGATATAACAGCTGCTTCAGAAAAGTTGGCTGAATGCCAAGAGACAATACTTAACCTCGACAAGCAGTTTAAGGCAATGGCTGCACCAAGGGAAGCAGCTCTTTTTGACAAGGTCATCACTAATCCCACTGATACAGATACCCCCACTGCCAAAGCCGGAAGCCCAACCCCACACAAAAACACAAACCAACGGTCCTCGTTACTAGATAAAATGTTAGCAGAAGACGGTGCTAGCATCAAGGAGTTTAGCTCTCCAATTTCAAAAGAGGTTTCGACTTCCACATTCAGTACTAAAAGGGTAATAGAGCCCCTCGAGAATATCATTGTTCTAAATAGTAAATATCAGGATGACAATGCAGCTGTTGGTTCATTAGCTATAGTGCCCGGAAAGAAACTGGGAGGTGGGAGCTTATGGAGAAAGCTAGTGCGGAGAAAGAAGAAAGGTATCAGCCAAAAGGCACCCCTTTCGATTGCCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FPP

Protein Analysis

1072

Amino Acids

119.91

Weight (kDa)

5.61

Isoelectric Point (pI)

47.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPP PF05911 68 - 945 2.9e-287 Filament-like plant protein, long coiled-coil
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1923
AccB1I GGYRCC 1 cut(s) 3193
AccB7I CCANNNNNTGG 1 cut(s) 1934
AccI GTMKAC 1 cut(s) 2269
AccIII TCCGGA 2 cut(s) 699, 819
AciI CCGC 4 cut(s) 732, 808, 826, 3163
AclWI GGATC 4 cut(s) 691, 1661, 1721, 1734
AcoI YGGCCR 1 cut(s) 2260
AcsI RAATTY 7 cut(s) 446, 716, 1972, 2096, 2192, 2335, 2692
AcuI CTGAAG 9 cut(s) 104, 162, 308, 1302, 1392, 1486, 2124, 2357, 2736
AdeI CACNNNGTG 2 cut(s) 2216, 2512
AfaI GTAC 2 cut(s) 1660, 3025
AfiI CCNNNNNNNGG 5 cut(s) 498, 1717, 1934, 2416, 2710
AflIII ACRYGT 1 cut(s) 1062
AhdI GACNNNNNGTC 1 cut(s) 1492
AjiI CACGTC 1 cut(s) 1810
AjnI CCWGG 4 cut(s) 832, 1128, 1940, 2508
AjuI GAANNNNNNNTTGG 6 cut(s) 122, 154, 281, 313, 2217, 2249
AleI CACNNNNGTG 1 cut(s) 1599
Alw21I GWGCWC 2 cut(s) 1266, 1596
Alw26I GTCTC 7 cut(s) 63, 88, 938, 1180, 1296, 2362, 2771
AlwI GGATC 4 cut(s) 691, 1661, 1721, 1734
AlwNI CAGNNNCTG 1 cut(s) 839
Ama87I CYCGRG 1 cut(s) 3047
Aor13HI TCCGGA 2 cut(s) 699, 819
AoxI GGCC 6 cut(s) 489, 835, 1126, 2260, 2289, 2547
ApoI RAATTY 7 cut(s) 446, 716, 1972, 2096, 2192, 2335, 2692
ArsI GACNNNNNNTTYG 2 cut(s) 2912, 2944
Asp700I GAANNNNTTC 2 cut(s) 246, 502
AspS9I GGNCC 5 cut(s) 4, 836, 1474, 1938, 2928
AsuC2I CCSGG 1 cut(s) 3120
AsuHPI GGTGA 5 cut(s) 1782, 2344, 2498, 2524, 2564
AsuNHI GCTAGC 1 cut(s) 2966
AvaI CYCGRG 1 cut(s) 3047
AvaII GGWCC 4 cut(s) 4, 1474, 1938, 2928
BaeGI GKGCMC 1 cut(s) 3120
BalI TGGCCA 1 cut(s) 2262
BamHI GGATCC 1 cut(s) 1726
BanI GGYRCC 1 cut(s) 3193
BanII GRGCYC 2 cut(s) 361, 3045
BauI CACGAG 1 cut(s) 2708
BbsI GAAGAC 3 cut(s) 440, 2496, 2964
Bbv12I GWGCWC 2 cut(s) 1266, 1596
BccI CCATC 8 cut(s) 347, 537, 1327, 1465, 1538, 1918, 1943, 2712
BcgI CGANNNNNNTGC 3 cut(s) 1291, 1325, 3183
BciT130I CCWGG 4 cut(s) 834, 1130, 1942, 2510
BcnI CCSGG 1 cut(s) 3120
BcoDI GTCTC 7 cut(s) 63, 88, 938, 1180, 1296, 2362, 2771
BfmI CTRYAG 7 cut(s) 36, 57, 1841, 2115, 2285, 2654, 3111
BglI GCCNNNNNGGC 1 cut(s) 233
BglII AGATCT 3 cut(s) 1772, 1855, 2524
BmcAI AGTACT 1 cut(s) 3025
Bme1390I CCNGG 5 cut(s) 834, 1130, 1942, 2510, 3120
Bme18I GGWCC 4 cut(s) 4, 1474, 1938, 2928
BmeRI GACNNNNNGTC 1 cut(s) 1492
BmeT110I CYCGRG 1 cut(s) 3047
BmgBI CACGTC 1 cut(s) 1810
BmgT120I GGNCC 5 cut(s) 4, 836, 1474, 1938, 2928
BmiI GGNNCC 6 cut(s) 358, 812, 1476, 1728, 1939, 3195
BmrFI CCNGG 5 cut(s) 834, 1130, 1942, 2510, 3120
BmrI ACTGGG 1 cut(s) 3140
BmsI GCATC 9 cut(s) 196, 265, 727, 749, 1193, 1247, 2167, 2197, 2979
BmtI GCTAGC 1 cut(s) 2970
BmuI ACTGGG 1 cut(s) 3140
BoxI GACNNNNGTC 1 cut(s) 2374
BpiI GAAGAC 3 cut(s) 440, 2496, 2964
BplI GAGNNNNNCTC 4 cut(s) 1433, 1465, 2969, 3001
BpmI CTGGAG 3 cut(s) 1031, 1280, 1899
BpuEI CTTGAG 8 cut(s) 347, 701, 713, 998, 1652, 1804, 2399, 2464
BpuMI CCSGG 1 cut(s) 3120
BsaBI GATNNNNATC 2 cut(s) 631, 2703
BsaI GGTCTC 1 cut(s) 1296
BsaJI CCNNGG 4 cut(s) 14, 1137, 1431, 2822
BsaWI WCCGGW 2 cut(s) 699, 819
BsaXI ACNNNNNCTCC 4 cut(s) 464, 494, 1511, 1541
Bsc4I CCNNNNNNNGG 5 cut(s) 498, 1717, 1934, 2416, 2710
Bse1I ACTGG 5 cut(s) 1048, 1263, 1587, 2008, 3135
Bse3DI GCAATG 1 cut(s) 2817
Bse8I GATNNNNATC 2 cut(s) 631, 2703
BseAI TCCGGA 2 cut(s) 699, 819
BseBI CCWGG 4 cut(s) 834, 1130, 1942, 2510
BseDI CCNNGG 4 cut(s) 14, 1137, 1431, 2822
BseGI GGATG 6 cut(s) 358, 1342, 1954, 2182, 2209, 3088
BseJI GATNNNNATC 2 cut(s) 631, 2703
BseLI CCNNNNNNNGG 5 cut(s) 498, 1717, 1934, 2416, 2710
BseMI GCAATG 1 cut(s) 2817
BseMII CTCAG 7 cut(s) 99, 117, 175, 630, 933, 1850, 2041
BseNI ACTGG 5 cut(s) 1048, 1263, 1587, 2008, 3135
BseRI GAGGAG 5 cut(s) 488, 919, 1165, 1545, 1812
BseSI GKGCMC 1 cut(s) 3120
BseYI CCCAGC 1 cut(s) 255
BsgI GTGCAG 2 cut(s) 1732, 2802
BshFI GGCC 6 cut(s) 491, 837, 1128, 2262, 2291, 2549
BshNI GGYRCC 1 cut(s) 3193
BsiHKAI GWGCWC 2 cut(s) 1266, 1596
BsiHKCI CYCGRG 1 cut(s) 3047
BsiSI CCGG 4 cut(s) 700, 820, 2892, 3120
BslFI GGGAC 3 cut(s) 899, 1460, 2572
BslI CCNNNNNNNGG 5 cut(s) 498, 1717, 1934, 2416, 2710
BsmAI GTCTC 7 cut(s) 63, 88, 938, 1180, 1296, 2362, 2771
BsmFI GGGAC 3 cut(s) 899, 1460, 2572
BsmI GAATGC 3 cut(s) 374, 1418, 2774
BsnI GGCC 6 cut(s) 491, 837, 1128, 2262, 2291, 2549
Bso31I GGTCTC 1 cut(s) 1296
BsoBI CYCGRG 1 cut(s) 3047
Bsp1286I GDGCHC 5 cut(s) 361, 1266, 1596, 3045, 3120
Bsp13I TCCGGA 2 cut(s) 699, 819
Bsp1407I TGTACA 1 cut(s) 1658
Bsp143I GATC 9 cut(s) 696, 1666, 1726, 1772, 1855, 2032, 2065, 2524, 2698
Bsp19I CCATGG 1 cut(s) 1137
BspACI CCGC 4 cut(s) 732, 808, 826, 3163
BspANI GGCC 6 cut(s) 491, 837, 1128, 2262, 2291, 2549
BspCNI CTCAG 7 cut(s) 98, 118, 174, 631, 934, 1851, 2040
BspEI TCCGGA 2 cut(s) 699, 819
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 6 cut(s) 358, 812, 1476, 1728, 1939, 3195
BspMAI CTGCAG 5 cut(s) 40, 61, 1845, 2119, 2289
BspOI GCTAGC 1 cut(s) 2970
BspPI GGATC 4 cut(s) 691, 1661, 1721, 1734
BspQI GCTCTTC 1 cut(s) 2274
BspT107I GGYRCC 1 cut(s) 3193
BspTNI GGTCTC 1 cut(s) 1296
BsrDI GCAATG 1 cut(s) 2817
BsrGI TGTACA 1 cut(s) 1658
BsrI ACTGG 5 cut(s) 1048, 1263, 1587, 2008, 3135
BssECI CCNNGG 4 cut(s) 14, 1137, 1431, 2822
BssMI GATC 9 cut(s) 696, 1666, 1726, 1772, 1855, 2032, 2065, 2524, 2698
BssNAI GTATAC 1 cut(s) 2270
BssSI CACGAG 1 cut(s) 2708
BssT1I CCWWGG 4 cut(s) 14, 1137, 1431, 2822
Bst1107I GTATAC 1 cut(s) 2270
Bst2BI CACGAG 1 cut(s) 2708
Bst2UI CCWGG 4 cut(s) 834, 1130, 1942, 2510
Bst4CI ACNGT 7 cut(s) 200, 1309, 1490, 1601, 2046, 2928, 2963
Bst6I CTCTTC 4 cut(s) 99, 702, 1517, 2274
BstAPI GCANNNNNTGC 2 cut(s) 1424, 2816
BstAUI TGTACA 1 cut(s) 1658
BstC8I GCNNGC 9 cut(s) 174, 328, 374, 1987, 2059, 2289, 2440, 2721, 2968
BstDEI CTNAG 8 cut(s) 85, 126, 161, 533, 639, 942, 1859, 2027
BstDSI CCRYGG 1 cut(s) 1137
BstF5I GGATG 6 cut(s) 358, 1342, 1954, 2182, 2209, 3088
BstKTI GATC 9 cut(s) 699, 1669, 1729, 1775, 1858, 2035, 2068, 2527, 2701
BstMAI GTCTC 7 cut(s) 63, 88, 938, 1180, 1296, 2362, 2771
BstMBI GATC 9 cut(s) 696, 1666, 1726, 1772, 1855, 2032, 2065, 2524, 2698
BstNI CCWGG 4 cut(s) 834, 1130, 1942, 2510
BstNSI RCATGY 5 cut(s) 227, 376, 1066, 1659, 2646
BstPAI GACNNNNGTC 1 cut(s) 2374
BstSCI CCNGG 5 cut(s) 832, 1128, 1940, 2508, 3118
BstSFI CTRYAG 7 cut(s) 36, 57, 1841, 2115, 2285, 2654, 3111
BstSLI GKGCMC 1 cut(s) 3120
BstV2I GAAGAC 3 cut(s) 440, 2496, 2964
BstX2I RGATCY 6 cut(s) 696, 1666, 1726, 1772, 1855, 2524
BstYI RGATCY 6 cut(s) 696, 1666, 1726, 1772, 1855, 2524
BstZ17I GTATAC 1 cut(s) 2270
BsuRI GGCC 6 cut(s) 491, 837, 1128, 2262, 2291, 2549
BtgI CCRYGG 1 cut(s) 1137
BtgZI GCGATG 1 cut(s) 1221
BtrI CACGTC 1 cut(s) 1810
BtsCI GGATG 6 cut(s) 358, 1342, 1954, 2182, 2209, 3088
BtsI GCAGTG 2 cut(s) 2140, 2880
BtsIMutI CAGTG 8 cut(s) 169, 636, 1495, 2015, 2035, 2140, 2862, 2880
Cac8I GCNNGC 9 cut(s) 174, 328, 374, 1987, 2059, 2289, 2440, 2721, 2968
CaiI CAGNNNCTG 1 cut(s) 839
CciI TCATGA 1 cut(s) 418
Cfr13I GGNCC 5 cut(s) 4, 836, 1474, 1938, 2928
CsiI ACCWGGT 1 cut(s) 2508
Csp6I GTAC 2 cut(s) 1659, 3024
CspCI CAANNNNNGTGG 1 cut(s) 31
CviQI GTAC 2 cut(s) 1659, 3024
DdeI CTNAG 8 cut(s) 85, 126, 161, 533, 639, 942, 1859, 2027
DpnI GATC 9 cut(s) 698, 1668, 1728, 1774, 1857, 2034, 2067, 2526, 2700
DpnII GATC 9 cut(s) 696, 1666, 1726, 1772, 1855, 2032, 2065, 2524, 2698
DraI TTTAAA 1 cut(s) 2136
DraIII CACNNNGTG 2 cut(s) 2216, 2512
DriI GACNNNNNGTC 1 cut(s) 1492
EaeI YGGCCR 1 cut(s) 2260
Eam1104I CTCTTC 4 cut(s) 99, 702, 1517, 2274
Eam1105I GACNNNNNGTC 1 cut(s) 1492
EarI CTCTTC 4 cut(s) 99, 702, 1517, 2274
Eco130I CCWWGG 4 cut(s) 14, 1137, 1431, 2822
Eco24I GRGCYC 2 cut(s) 361, 3045
Eco31I GGTCTC 1 cut(s) 1296
Eco47I GGWCC 4 cut(s) 4, 1474, 1938, 2928
Eco57I CTGAAG 9 cut(s) 104, 162, 308, 1302, 1392, 1486, 2124, 2357, 2736
Eco88I CYCGRG 1 cut(s) 3047
EcoO109I RGGNCCY 1 cut(s) 836
EcoRI GAATTC 2 cut(s) 446, 716
EcoRII CCWGG 4 cut(s) 832, 1128, 1940, 2508
EcoT14I CCWWGG 4 cut(s) 14, 1137, 1431, 2822
EcoT22I ATGCAT 2 cut(s) 374, 742
EcoT38I GRGCYC 2 cut(s) 361, 3045
ErhI CCWWGG 4 cut(s) 14, 1137, 1431, 2822
FaqI GGGAC 3 cut(s) 899, 1460, 2572
FblI GTMKAC 1 cut(s) 2269
FokI GGATG 6 cut(s) 365, 1349, 1961, 2189, 2216, 3095
FriOI GRGCYC 2 cut(s) 361, 3045
GsaI CCCAGC 1 cut(s) 259
GsuI CTGGAG 3 cut(s) 1031, 1280, 1899
HaeIII GGCC 6 cut(s) 491, 837, 1128, 2262, 2291, 2549
HapII CCGG 4 cut(s) 700, 820, 2892, 3120
HincII GTYRAC 2 cut(s) 895, 964
HindII GTYRAC 2 cut(s) 895, 964
HindIII AAGCTT 2 cut(s) 170, 306
HpaI GTTAAC 1 cut(s) 964
HpaII CCGG 4 cut(s) 700, 820, 2892, 3120
HphI GGTGA 5 cut(s) 1782, 2344, 2498, 2524, 2564
Hpy166II GTNNAC 6 cut(s) 895, 964, 1813, 1962, 2270, 2465
Hpy8I GTNNAC 6 cut(s) 895, 964, 1813, 1962, 2270, 2465
Hpy99I CGWCG 1 cut(s) 729
HpyCH4III ACNGT 7 cut(s) 200, 1309, 1490, 1601, 2046, 2928, 2963
HpyCH4IV ACGT 2 cut(s) 1809, 2160
HpyF3I CTNAG 8 cut(s) 85, 126, 161, 533, 639, 942, 1859, 2027
HpySE526I ACGT 2 cut(s) 1809, 2160
Kpn2I TCCGGA 2 cut(s) 699, 819
KspAI GTTAAC 1 cut(s) 964
Kzo9I GATC 9 cut(s) 696, 1666, 1726, 1772, 1855, 2032, 2065, 2524, 2698
LguI GCTCTTC 1 cut(s) 2274
LmnI GCTCC 8 cut(s) 356, 816, 976, 1261, 1313, 1558, 1591, 3141
LweI GCATC 9 cut(s) 196, 265, 727, 749, 1193, 1247, 2167, 2197, 2979
MabI ACCWGGT 1 cut(s) 2508
MaeII ACGT 2 cut(s) 1809, 2160
MaeIII GTNAC 8 cut(s) 194, 536, 1164, 1780, 1805, 2246, 2454, 2934
MalI GATC 9 cut(s) 698, 1668, 1728, 1774, 1857, 2034, 2067, 2526, 2700
MboI GATC 9 cut(s) 696, 1666, 1726, 1772, 1855, 2032, 2065, 2524, 2698
MfeI CAATTG 2 cut(s) 347, 584
MflI RGATCY 6 cut(s) 696, 1666, 1726, 1772, 1855, 2524
MhlI GDGCHC 5 cut(s) 361, 1266, 1596, 3045, 3120
MlsI TGGCCA 1 cut(s) 2262
MluNI TGGCCA 1 cut(s) 2262
MlyI GAGTC 7 cut(s) 881, 914, 940, 1003, 1151, 1502, 2480
MmeI TCCRAC 6 cut(s) 120, 450, 1291, 2215, 2340, 2613
Mox20I TGGCCA 1 cut(s) 2262
Mph1103I ATGCAT 2 cut(s) 374, 742
MroI TCCGGA 2 cut(s) 699, 819
MroXI GAANNNNTTC 2 cut(s) 246, 502
MscI TGGCCA 1 cut(s) 2262
MslI CAYNNNNRTG 1 cut(s) 1599
Msp20I TGGCCA 1 cut(s) 2262
MspA1I CMGCKG 5 cut(s) 56, 326, 734, 2747, 3095
MspI CCGG 4 cut(s) 700, 820, 2892, 3120
MspR9I CCNGG 5 cut(s) 834, 1130, 1942, 2510, 3120
MunI CAATTG 2 cut(s) 347, 584
Mva1269I GAATGC 3 cut(s) 374, 1418, 2774
MvaI CCWGG 4 cut(s) 834, 1130, 1942, 2510
NciI CCSGG 1 cut(s) 3120
NcoI CCATGG 1 cut(s) 1137
NdeII GATC 9 cut(s) 696, 1666, 1726, 1772, 1855, 2032, 2065, 2524, 2698
NheI GCTAGC 1 cut(s) 2966
NlaIV GGNNCC 6 cut(s) 358, 812, 1476, 1728, 1939, 3195
NmuCI GTSAC 3 cut(s) 1164, 1805, 2246
NsiI ATGCAT 2 cut(s) 374, 742
NspI RCATGY 5 cut(s) 227, 376, 1066, 1659, 2646
OliI CACNNNNGTG 1 cut(s) 1599
PaeI GCATGC 1 cut(s) 376
PaeR7I CTCGAG 1 cut(s) 3047
PagI TCATGA 1 cut(s) 418
PciI ACATGT 1 cut(s) 1062
PciSI GCTCTTC 1 cut(s) 2274
PcsI WCGNNNNNNNCGW 1 cut(s) 391
PctI GAATGC 3 cut(s) 374, 1418, 2774
PdmI GAANNNNTTC 2 cut(s) 246, 502
PfeI GAWTC 8 cut(s) 632, 788, 1115, 1229, 1787, 1899, 2342, 2420
PflFI GACNNNGTC 1 cut(s) 2846
PflMI CCANNNNNTGG 1 cut(s) 1934
PfoI TCCNGGA 1 cut(s) 1940
PleI GAGTC 7 cut(s) 881, 914, 940, 1003, 1150, 1501, 2479
PpsI GAGTC 7 cut(s) 881, 914, 940, 1003, 1150, 1501, 2479
PscI ACATGT 1 cut(s) 1062
PshAI GACNNNNGTC 1 cut(s) 2374
PsiI TTATAA 1 cut(s) 1923
Psp6I CCWGG 4 cut(s) 832, 1128, 1940, 2508
PspFI CCCAGC 1 cut(s) 255
PspGI CCWGG 4 cut(s) 832, 1128, 1940, 2508
PspN4I GGNNCC 6 cut(s) 358, 812, 1476, 1728, 1939, 3195
PspPI GGNCC 5 cut(s) 4, 836, 1474, 1938, 2928
PstI CTGCAG 5 cut(s) 40, 61, 1845, 2119, 2289
PstNI CAGNNNCTG 1 cut(s) 839
PsuI RGATCY 6 cut(s) 696, 1666, 1726, 1772, 1855, 2524
PsyI GACNNNGTC 1 cut(s) 2846
PvuII CAGCTG 4 cut(s) 56, 326, 2747, 3095
RsaI GTAC 2 cut(s) 1660, 3025
RsaNI GTAC 2 cut(s) 1659, 3024
RseI CAYNNNNRTG 1 cut(s) 1599
SapI GCTCTTC 1 cut(s) 2274
Sau3AI GATC 9 cut(s) 696, 1666, 1726, 1772, 1855, 2032, 2065, 2524, 2698
Sau96I GGNCC 5 cut(s) 4, 836, 1474, 1938, 2928
ScaI AGTACT 1 cut(s) 3025
SchI GAGTC 7 cut(s) 881, 914, 940, 1003, 1151, 1502, 2480
ScrFI CCNGG 5 cut(s) 834, 1130, 1942, 2510, 3120
SduI GDGCHC 5 cut(s) 361, 1266, 1596, 3045, 3120
SexAI ACCWGGT 1 cut(s) 2508
SfaNI GCATC 9 cut(s) 196, 265, 727, 749, 1193, 1247, 2167, 2197, 2979
SfcI CTRYAG 7 cut(s) 36, 57, 1841, 2115, 2285, 2654, 3111
Sfr274I CTCGAG 1 cut(s) 3047
SinI GGWCC 4 cut(s) 4, 1474, 1938, 2928
SlaI CTCGAG 1 cut(s) 3047
SmiMI CAYNNNNRTG 1 cut(s) 1599
SmlI CTYRAG 9 cut(s) 362, 680, 692, 1013, 1631, 1819, 2414, 2443, 3047
SmoI CTYRAG 9 cut(s) 362, 680, 692, 1013, 1631, 1819, 2414, 2443, 3047
SphI GCATGC 1 cut(s) 376
SsiI CCGC 4 cut(s) 732, 808, 826, 3163
StyD4I CCNGG 5 cut(s) 832, 1128, 1940, 2508, 3118
StyI CCWWGG 4 cut(s) 14, 1137, 1431, 2822
TaaI ACNGT 7 cut(s) 200, 1309, 1490, 1601, 2046, 2928, 2963
TaiI ACGT 2 cut(s) 1812, 2163
TaqI TCGA 8 cut(s) 394, 450, 727, 1542, 2793, 3008, 3048, 3203
TatI WGTACW 2 cut(s) 1658, 3023
TauI GCSGC 1 cut(s) 811
TfiI GAWTC 8 cut(s) 632, 788, 1115, 1229, 1787, 1899, 2342, 2420
TscAI CASTG 8 cut(s) 169, 643, 1495, 2015, 2035, 2147, 2869, 2887
TseFI GTSAC 3 cut(s) 1164, 1805, 2246
Tsp45I GTSAC 3 cut(s) 1164, 1805, 2246
TspGWI ACGGA 6 cut(s) 989, 1168, 1268, 1454, 1726, 2558
TspRI CASTG 8 cut(s) 169, 643, 1495, 2015, 2035, 2147, 2869, 2887
Tth111I GACNNNGTC 1 cut(s) 2846
Van91I CCANNNNNTGG 1 cut(s) 1934
VpaK11BI GGWCC 4 cut(s) 4, 1474, 1938, 2928
XapI RAATTY 7 cut(s) 446, 716, 1972, 2096, 2192, 2335, 2692
XbaI TCTAGA 2 cut(s) 923, 1055
XceI RCATGY 5 cut(s) 227, 376, 1066, 1659, 2646
XhoI CTCGAG 1 cut(s) 3047
XmiI GTMKAC 1 cut(s) 2269
XmnI GAANNNNTTC 2 cut(s) 246, 502
ZrmI AGTACT 1 cut(s) 3025
Zsp2I ATGCAT 2 cut(s) 374, 742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.