MD02G1175900.v1.1

Filament-like plant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0007037
Physical Location & Seq
Reverse (-)
15457096 .. 15463292
6197 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1175900.v1.1.491

Sequence Viewer

Length: 3198 bp
ATGGACCACAAGCCATGGCTTTGGAGGAAGAAATCTGCAGATAAAACCAATTCAGCAGCAGCAGAAGGAGACAAAGTCAATGTCTCAGTCAAAGGAAATGGAGAGGAGGTAGAAGCACTTCAGGCTGAGAAGGCAGAACTGGAGAACAACCTGAAAGCTCTAAGCGATAAGCTTGCTTCAGCTCTCTCTGAATGTAACAGTAAAGATGCACTTGTGAAAAAACATGCCAAAACGGCACAGGATGCTGTTCAAGGCTGGGAGAAGGTGGAAGCAGATGCGGGGTTTCTGAAGCATGAATTAGATAAATCTTTCCAAGTCAGAGCAGCTGGTGAAGAAAGAATAGCTCAATTGGATGGAGCCCTCAAGGACTGCATGCAGCAGCTACGATTTGTTCGAGAAGAGCAGGAGCAAAGGGTTCACGAGGCTATGATGAAGGCATCAAGAGAATTCGAGAAATCCAAGATGGCGTTGGAGGAGAAGTTAGCAGAGACTACTAGAAGGCTTTCTAAAATCGGTGCTGAAAACACCCATCTTAGTAACGCTCTTTTAGTGAAGGATAAGTTGATAGAAGATTTAAGAAAACAATTGACACAGGTGGAAGCTGATTTCAATGCACTCACGCTCAGATTAGAATCCACTGAGAAAGATAATGCTTCTTTGAAATATGAGGTACGGGTGCTTGAGAAAGAGCTTGAGATCCGGAATGAAGAGAGAGAATTCAATCGTCGAACCGCTGATGCATCACACAAGCAGAATTTGGAGGGTGCAAAGAAAATTGCAAAGTTAGAATCAGAATGTCAGAGGCTGCGGCTTCTAGTCCGGAAGCGGTTACCAGGCCCTGCTGCTTTGGCAAAAATGAAAAATGAAGTGGAAATGCTAGGACGGGACTCTGTTGGCATGGGGAGGAGAAAGTTGAATGACTCCACAGTTGATAACTTTCCTGAGACTCCCAGCAAAAAGGTTAACATTTTGACTGAGCAGTTATATGCTATGGAAGAAGAAAACCAGACTCTCAAGGAAGCACTCAATAAGAAGATAAATGAACTCCAGTTCTCCAGAAACATGTATGCCCGTGTAGCTTCTAAATTATCGCAATCTGAGACACCGCTTGAAGAATCATTAAAGGGCCAGGCAACCATGGAGTCAATGAGGAGTAATCTTCTGTCACAAGAAGTCTCTGTAGCATCTATGTCTGATATTGGCAGCGATGATAAGGTTAGTTGTGCCGATTCATGGGCATCTGCCTTGATTACAGAACTGGAGCACTTCAGAGCTGAAAAACAAAAAGGGTCTCTGATGAACAAAACTGTAGGAGCTTCAGACATAAATCTGATGGATGACTTTGTTGAAATGGAAAAATTAGCAGTCGTTTCTGCTGATAAACAAAGTGCTGGTTCTCCTGTTTCTTCAGTCCAGGCATTTGCGCGCCCCTTGGAATCTGAGTATTCCTCCGAACTTGTGGGCAGCCAGATGGTCCCTATTTTGGACGGTGAGTCAGGCTTCAGTTTGTCAAACAGGGAGACCAGGTTTAACAATATTGTCAATGGCAAAGCTCCTCATTGGGTTGAGGATATAGTGAAACTGGTGATGGAGCACAACCGTGTTGCAGGAAGAAGCCCCGAACAGATACTTAAAGACTTAAGAATAGCTTTGGCATGTACAGAAGATCCAAAGCCTGGTGAATTTGTTAATGCAAGGACAAATCGAAGCCATCTTGATGCATTGAATCCTTCCTCCGTTAAGAGCTGCACCTCATGGAAAGGTTCAGATAAATCTCTAGTAAACGATTCACCCAGAGGAGTAAGTGATGTGGACATCTCAAACCCACAGAAGAGTAATCCGCAGTTCCAGCCAGATCTGAGTAAGTCATTATGTAAAGTAATTGAGCTTATTGAAGGAATCCACGTTCCATCTCCAGATTATAACCCAGAGAATGGATCCAGGAAGGACGGAAACGTGTCGACATTTAAAAACTCGGAAAACGCAGGCTACATGGTTCGTGTTTTCCAGTGGAAAGCTTCTGAACTCGGTGATCTTTTACAACAGTTTGTTCATGCTTGCTATGATCTGTTGAATGGAAAGGCTGGTCTCGAAAAATTTGCCAAAGAATTAACTGCTGCATTGGACTGGATTTTAAACCACTGCTTTTCACTTCAAGATGTTTCAAGCATGAAGGATGCAATTAAGAAGGAATTTGATTGGGATGATACACGAAGTGAAACCGAAGGAGAAGTTGGAGCGGTTGGTCACTTGTCAAATGGCCATATTATACAAATAGAAGAGCTGCAGGCCAATCTGGTAAAGGAAAACAGAAAGTTAAAGAATGAATTGGTGAATTTAGAATCTGCAAGGAGAGAGTTGGAAGGGAGACTTCAGTCGGCCAGTGATAAGAGCGAATACCTGATTAACCAGCTCAAGGAATCTGAAAAAGCTATTGCCAGCTTGAGAACAGAGTTACAATGTTTAAGAGAGTCAAAGGAAATCGTTGAAGATCATTTTAAAAATCACAAGATGATGAATGACGATCTTGAAACGCAGCTTACTGAGGCCAGAGTTGAATTAAACGAAGCTCTCCAAAAGTTTTCATCCCTAGAAGTTCATCTGCAGAATAAACACAACTGCTGTGCAGAGTTGGAGGCTACATGCCTGGAACTGCAGCTTCAGCTTGATAGTGTGAAGAAAAGCCCAAATTCCAATCTTAATCAGGAGGAAAGGAAAGCCCAAAATGATTGGGAGATAGCAGCTGCTTCAGAAAAGTTGGCCGAATGCCAAGAGACAATACTTAACCTCGGGAAGCAGTTGAAGGCAATGGCTTCACCAAGAGAAGCAGCCCTTTTCGACAAGGTCATCACTAATCCTTCTGATACAGACACCCCCACAGCCAAAGCTGCAAGCCAAACCCCACACAGGAACTCAAACCAACGATCCTCATTACTAGATAAAATGCTAGCAGAAGATGGTGCTAGCGTCAAGGACTATACGTCTCCAACGACAAAAGAGGTTGGCAGTAATTCGACTTCCACGTTCGGTCCTAATATCCTTGTTCTAAATAGTAAATACCAGGATGACAATGCAGCTGTTGGTTCGTTAGCTATAGTGCCCAGCAAGAAATGGGGAGGTGGGAGCCTATGGAGAAAGCTAGTGTGGAGAAAGAAGAAAGGTAACAGCCTAAAGACACCCCTTCCGATTGGCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FPP

Protein Analysis

1066

Amino Acids

118.8

Weight (kDa)

5.78

Isoelectric Point (pI)

46.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPP PF05911 68 - 944 1.7e-284 Filament-like plant protein, long coiled-coil
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1923
AccB7I CCANNNNNTGG 2 cut(s) 1676, 1934
AccBSI CCGCTC 1 cut(s) 2240
AccI GTMKAC 1 cut(s) 1961
AccII CGCG 1 cut(s) 1426
AccIII TCCGGA 2 cut(s) 699, 819
AciI CCGC 7 cut(s) 278, 732, 808, 826, 1106, 1841, 2240
AclWI GGATC 5 cut(s) 691, 1661, 1932, 1945, 2919
AcoI YGGCCR 3 cut(s) 2260, 2379, 2760
AcsI RAATTY 8 cut(s) 446, 716, 754, 1682, 2096, 2192, 2335, 2689
AdeI CACNNNGTG 1 cut(s) 2216
AfaI GTAC 2 cut(s) 672, 1660
AfiI CCNNNNNNNGG 6 cut(s) 1233, 1483, 1676, 1934, 2416, 2907
AflII CTTAAG 1 cut(s) 1639
AflIII ACRYGT 2 cut(s) 1062, 1956
AhdI GACNNNNNGTC 2 cut(s) 1492, 2980
AjnI CCWGG 8 cut(s) 832, 1128, 1413, 1523, 1675, 1940, 2646, 3060
AjuI GAANNNNNNNTTGG 2 cut(s) 2217, 2249
AleI CACNNNNGTG 1 cut(s) 1599
AloI GAACNNNNNNTCC 2 cut(s) 1890, 1922
Alw21I GWGCWC 2 cut(s) 1266, 1596
AlwI GGATC 5 cut(s) 691, 1661, 1932, 1945, 2919
AlwNI CAGNNNCTG 2 cut(s) 805, 839
Ama87I CYCGRG 1 cut(s) 2789
Aor13HI TCCGGA 2 cut(s) 699, 819
AoxI GGCC 8 cut(s) 835, 1126, 2260, 2289, 2379, 2547, 2760, 3190
ApoI RAATTY 8 cut(s) 446, 716, 754, 1682, 2096, 2192, 2335, 2689
ArsI GACNNNNNNTTYG 2 cut(s) 66, 98
Asp700I GAANNNNTTC 2 cut(s) 117, 502
AspLEI GCGC 2 cut(s) 1426, 1428
AspS9I GGNCC 6 cut(s) 4, 836, 1126, 1474, 3029, 3191
AsuHPI GGTGA 8 cut(s) 341, 1502, 1597, 1691, 1782, 2042, 2344, 2808
AsuNHI GCTAGC 2 cut(s) 2947, 2963
AvaI CYCGRG 1 cut(s) 2789
AvaII GGWCC 3 cut(s) 4, 1474, 3029
BaeGI GKGCMC 1 cut(s) 3102
BalI TGGCCA 1 cut(s) 2262
BamHI GGATCC 1 cut(s) 1937
BanII GRGCYC 1 cut(s) 361
BarI GAAGNNNNNNTAC 4 cut(s) 102, 134, 3001, 3033
BauI CACGAG 1 cut(s) 419
Bbv12I GWGCWC 2 cut(s) 1266, 1596
BccI CCATC 9 cut(s) 347, 457, 537, 1327, 1465, 1582, 1719, 1918, 2951
BceAI ACGGC 1 cut(s) 249
BcgI CGANNNNNNTGC 4 cut(s) 155, 189, 2081, 2115
BciT130I CCWGG 8 cut(s) 834, 1130, 1415, 1525, 1677, 1942, 2648, 3062
BfaI CTAG 9 cut(s) 495, 815, 878, 1778, 2591, 2936, 2948, 2964, 3140
BfmI CTRYAG 7 cut(s) 36, 1179, 1308, 2285, 2603, 2654, 3093
BfrI CTTAAG 1 cut(s) 1639
BglI GCCNNNNNGGC 1 cut(s) 233
BglII AGATCT 1 cut(s) 1855
Bme1390I CCNGG 8 cut(s) 834, 1130, 1415, 1525, 1677, 1942, 2648, 3062
Bme18I GGWCC 3 cut(s) 4, 1474, 3029
BmeRI GACNNNNNGTC 2 cut(s) 1492, 2980
BmeT110I CYCGRG 1 cut(s) 2789
BmgT120I GGNCC 6 cut(s) 4, 836, 1126, 1474, 3029, 3191
BmiI GGNNCC 4 cut(s) 358, 1476, 1939, 3125
BmrFI CCNGG 8 cut(s) 834, 1130, 1415, 1525, 1677, 1942, 2648, 3062
BmtI GCTAGC 2 cut(s) 2951, 2967
BoxI GACNNNNGTC 1 cut(s) 2374
BplI GAGNNNNNCTC 2 cut(s) 1433, 1465
BpmI CTGGAG 5 cut(s) 161, 1031, 1039, 1280, 1899
BpuEI CTTGAG 6 cut(s) 347, 701, 713, 998, 2399, 2464
BsaBI GATNNNNATC 1 cut(s) 631
BsaI GGTCTC 3 cut(s) 1296, 1514, 2093
BsaJI CCNNGG 4 cut(s) 14, 1137, 1431, 2788
BsaWI WCCGGW 2 cut(s) 699, 819
BsaXI ACNNNNNCTCC 8 cut(s) 60, 90, 93, 123, 464, 494, 1511, 1541
Bsc4I CCNNNNNNNGG 6 cut(s) 1233, 1483, 1676, 1934, 2416, 2907
Bse1I ACTGG 7 cut(s) 144, 1048, 1263, 1587, 2008, 2132, 2382
Bse3DI GCAATG 1 cut(s) 2814
Bse8I GATNNNNATC 1 cut(s) 631
BseAI TCCGGA 2 cut(s) 699, 819
BseBI CCWGG 8 cut(s) 834, 1130, 1415, 1525, 1677, 1942, 2648, 3062
BseDI CCNNGG 4 cut(s) 14, 1137, 1431, 2788
BseGI GGATG 7 cut(s) 247, 358, 1342, 2182, 2209, 2585, 3070
BseJI GATNNNNATC 1 cut(s) 631
BseLI CCNNNNNNNGG 6 cut(s) 1233, 1483, 1676, 1934, 2416, 2907
BseMI GCAATG 1 cut(s) 2814
BseNI ACTGG 7 cut(s) 144, 1048, 1263, 1587, 2008, 2132, 2382
BsePI GCGCGC 1 cut(s) 1424
BseRI GAGGAG 6 cut(s) 119, 488, 919, 1165, 1545, 1812
BseSI GKGCMC 1 cut(s) 3102
BseYI CCCAGC 3 cut(s) 255, 950, 3101
BsgI GTGCAG 2 cut(s) 1732, 2646
Bsh1236I CGCG 1 cut(s) 1426
BshFI GGCC 8 cut(s) 837, 1128, 2262, 2291, 2381, 2549, 2762, 3192
BsiHKAI GWGCWC 2 cut(s) 1266, 1596
BsiHKCI CYCGRG 1 cut(s) 2789
BsiSI CCGG 2 cut(s) 700, 820
BslFI GGGAC 2 cut(s) 899, 1460
BslI CCNNNNNNNGG 6 cut(s) 1233, 1483, 1676, 1934, 2416, 2907
BsmBI CGTCTC 1 cut(s) 2988
BsmFI GGGAC 2 cut(s) 899, 1460
BsmI GAATGC 1 cut(s) 2771
BsnI GGCC 8 cut(s) 837, 1128, 2262, 2291, 2381, 2549, 2762, 3192
Bso31I GGTCTC 3 cut(s) 1296, 1514, 2093
BsoBI CYCGRG 1 cut(s) 2789
Bsp1286I GDGCHC 4 cut(s) 361, 1266, 1596, 3102
Bsp13I TCCGGA 2 cut(s) 699, 819
Bsp1407I TGTACA 1 cut(s) 1658
Bsp143I GATC 9 cut(s) 696, 1666, 1855, 1937, 2032, 2065, 2491, 2524, 2924
Bsp19I CCATGG 2 cut(s) 14, 1137
BspACI CCGC 7 cut(s) 278, 732, 808, 826, 1106, 1841, 2240
BspANI GGCC 8 cut(s) 837, 1128, 2262, 2291, 2381, 2549, 2762, 3192
BspEI TCCGGA 2 cut(s) 699, 819
BspFNI CGCG 1 cut(s) 1426
BspLI GGNNCC 4 cut(s) 358, 1476, 1939, 3125
BspMAI CTGCAG 4 cut(s) 40, 2289, 2607, 2658
BspOI GCTAGC 2 cut(s) 2951, 2967
BspPI GGATC 5 cut(s) 691, 1661, 1932, 1945, 2919
BspQI GCTCTTC 2 cut(s) 393, 2274
BspTI CTTAAG 1 cut(s) 1639
BspTNI GGTCTC 3 cut(s) 1296, 1514, 2093
BsrBI CCGCTC 1 cut(s) 2240
BsrDI GCAATG 1 cut(s) 2814
BsrGI TGTACA 1 cut(s) 1658
BsrI ACTGG 7 cut(s) 144, 1048, 1263, 1587, 2008, 2132, 2382
BssECI CCNNGG 4 cut(s) 14, 1137, 1431, 2788
BssHII GCGCGC 1 cut(s) 1424
BssMI GATC 9 cut(s) 696, 1666, 1855, 1937, 2032, 2065, 2491, 2524, 2924
BssSI CACGAG 1 cut(s) 419
BssT1I CCWWGG 3 cut(s) 14, 1137, 1431
Bst2BI CACGAG 1 cut(s) 419
Bst2UI CCWGG 8 cut(s) 834, 1130, 1415, 1525, 1677, 1942, 2648, 3062
Bst4CI ACNGT 6 cut(s) 200, 928, 1309, 1490, 1601, 2046
Bst6I CTCTTC 4 cut(s) 393, 702, 1826, 2274
BstAFI CTTAAG 1 cut(s) 1639
BstAPI GCANNNNNTGC 1 cut(s) 242
BstAUI TGTACA 1 cut(s) 1658
BstDSI CCRYGG 2 cut(s) 14, 1137
BstEII GGTNACC 1 cut(s) 828
BstF5I GGATG 7 cut(s) 247, 358, 1342, 2182, 2209, 2585, 3070
BstFNI CGCG 1 cut(s) 1426
BstHHI GCGC 2 cut(s) 1426, 1428
BstKTI GATC 9 cut(s) 699, 1669, 1858, 1940, 2035, 2068, 2494, 2527, 2927
BstMBI GATC 9 cut(s) 696, 1666, 1855, 1937, 2032, 2065, 2491, 2524, 2924
BstMWI GCNNNNNNNGC 9 cut(s) 122, 131, 233, 242, 848, 1076, 1849, 2662, 2888
BstNI CCWGG 8 cut(s) 834, 1130, 1415, 1525, 1677, 1942, 2648, 3062
BstNSI RCATGY 5 cut(s) 227, 376, 1066, 1659, 2646
BstPAI GACNNNNGTC 1 cut(s) 2374
BstPI GGTNACC 1 cut(s) 828
BstSCI CCNGG 8 cut(s) 832, 1128, 1413, 1523, 1675, 1940, 2646, 3060
BstSFI CTRYAG 7 cut(s) 36, 1179, 1308, 2285, 2603, 2654, 3093
BstSLI GKGCMC 1 cut(s) 3102
BstUI CGCG 1 cut(s) 1426
BstX2I RGATCY 4 cut(s) 696, 1666, 1855, 1937
BstXI CCANNNNNNTGG 1 cut(s) 21
BstYI RGATCY 4 cut(s) 696, 1666, 1855, 1937
BsuRI GGCC 8 cut(s) 837, 1128, 2262, 2291, 2381, 2549, 2762, 3192
BtgI CCRYGG 2 cut(s) 14, 1137
BtgZI GCGATG 1 cut(s) 1221
BtsCI GGATG 7 cut(s) 247, 358, 1342, 2182, 2209, 2585, 3070
BtsI GCAGTG 1 cut(s) 2140
BtsIMutI CAGTG 4 cut(s) 636, 2015, 2140, 2389
CaiI CAGNNNCTG 2 cut(s) 805, 839
CfoI GCGC 2 cut(s) 1426, 1428
Cfr13I GGNCC 6 cut(s) 4, 836, 1126, 1474, 3029, 3191
CseI GACGC 1 cut(s) 2956
CsiI ACCWGGT 1 cut(s) 1523
Csp6I GTAC 2 cut(s) 671, 1659
CviQI GTAC 2 cut(s) 671, 1659
DpnI GATC 9 cut(s) 698, 1668, 1857, 1939, 2034, 2067, 2493, 2526, 2926
DpnII GATC 9 cut(s) 696, 1666, 1855, 1937, 2032, 2065, 2491, 2524, 2924
DraI TTTAAA 3 cut(s) 1969, 2136, 2500
DraIII CACNNNGTG 1 cut(s) 2216
DriI GACNNNNNGTC 2 cut(s) 1492, 2980
EaeI YGGCCR 3 cut(s) 2260, 2379, 2760
Eam1104I CTCTTC 4 cut(s) 393, 702, 1826, 2274
Eam1105I GACNNNNNGTC 2 cut(s) 1492, 2980
EarI CTCTTC 4 cut(s) 393, 702, 1826, 2274
Eco130I CCWWGG 3 cut(s) 14, 1137, 1431
Eco24I GRGCYC 1 cut(s) 361
Eco31I GGTCTC 3 cut(s) 1296, 1514, 2093
Eco47I GGWCC 3 cut(s) 4, 1474, 3029
Eco88I CYCGRG 1 cut(s) 2789
Eco91I GGTNACC 1 cut(s) 828
EcoO109I RGGNCCY 1 cut(s) 836
EcoO65I GGTNACC 1 cut(s) 828
EcoRI GAATTC 2 cut(s) 446, 716
EcoRII CCWGG 8 cut(s) 832, 1128, 1413, 1523, 1675, 1940, 2646, 3060
EcoT14I CCWWGG 3 cut(s) 14, 1137, 1431
EcoT22I ATGCAT 2 cut(s) 742, 1723
EcoT38I GRGCYC 1 cut(s) 361
ErhI CCWWGG 3 cut(s) 14, 1137, 1431
Esp3I CGTCTC 1 cut(s) 2988
FalI AAGNNNNNCTT 8 cut(s) 195, 227, 1633, 1665, 2355, 2387, 2817, 2849
FaqI GGGAC 2 cut(s) 899, 1460
FauI CCCGC 1 cut(s) 271
FblI GTMKAC 1 cut(s) 1961
FokI GGATG 7 cut(s) 254, 365, 1349, 2189, 2216, 2572, 3077
FriOI GRGCYC 1 cut(s) 361
FspBI CTAG 9 cut(s) 495, 815, 878, 1778, 2591, 2936, 2948, 2964, 3140
GlaI GCGC 2 cut(s) 1425, 1427
GsaI CCCAGC 3 cut(s) 259, 954, 3105
GsuI CTGGAG 5 cut(s) 161, 1031, 1039, 1280, 1899
HaeIII GGCC 8 cut(s) 837, 1128, 2262, 2291, 2381, 2549, 2762, 3192
HapII CCGG 2 cut(s) 700, 820
HgaI GACGC 1 cut(s) 2956
HhaI GCGC 2 cut(s) 1426, 1428
Hin6I GCGC 2 cut(s) 1424, 1426
HinP1I GCGC 2 cut(s) 1424, 1426
HincII GTYRAC 2 cut(s) 964, 1962
HindII GTYRAC 2 cut(s) 964, 1962
HindIII AAGCTT 2 cut(s) 170, 2016
HpaI GTTAAC 1 cut(s) 964
HpaII CCGG 2 cut(s) 700, 820
HphI GGTGA 8 cut(s) 341, 1502, 1597, 1691, 1782, 2042, 2344, 2808
Hpy166II GTNNAC 5 cut(s) 418, 964, 1783, 1813, 1962
Hpy8I GTNNAC 5 cut(s) 418, 964, 1783, 1813, 1962
Hpy99I CGWCG 1 cut(s) 729
HpyCH4III ACNGT 6 cut(s) 200, 928, 1309, 1490, 1601, 2046
HpyCH4IV ACGT 4 cut(s) 1905, 1956, 2981, 3023
HpyF10VI GCNNNNNNNGC 9 cut(s) 122, 131, 233, 242, 848, 1076, 1849, 2662, 2888
HpySE526I ACGT 4 cut(s) 1905, 1956, 2981, 3023
HspAI GCGC 2 cut(s) 1424, 1426
Kpn2I TCCGGA 2 cut(s) 699, 819
KspAI GTTAAC 1 cut(s) 964
Kzo9I GATC 9 cut(s) 696, 1666, 1855, 1937, 2032, 2065, 2491, 2524, 2924
LguI GCTCTTC 2 cut(s) 393, 2274
LmnI GCTCC 8 cut(s) 356, 406, 1261, 1313, 1558, 1591, 2237, 3123
MabI ACCWGGT 1 cut(s) 1523
MaeI CTAG 9 cut(s) 495, 815, 878, 1778, 2591, 2936, 2948, 2964, 3140
MaeII ACGT 4 cut(s) 1905, 1956, 2981, 3023
MaeIII GTNAC 7 cut(s) 194, 536, 828, 1164, 2246, 2454, 3161
MalI GATC 9 cut(s) 698, 1668, 1857, 1939, 2034, 2067, 2493, 2526, 2926
MbiI CCGCTC 1 cut(s) 2240
MboI GATC 9 cut(s) 696, 1666, 1855, 1937, 2032, 2065, 2491, 2524, 2924
MfeI CAATTG 2 cut(s) 347, 584
MflI RGATCY 4 cut(s) 696, 1666, 1855, 1937
MhlI GDGCHC 4 cut(s) 361, 1266, 1596, 3102
MlsI TGGCCA 1 cut(s) 2262
MluNI TGGCCA 1 cut(s) 2262
MlyI GAGTC 7 cut(s) 881, 914, 940, 1003, 1151, 1502, 2480
MmeI TCCRAC 5 cut(s) 450, 2215, 2340, 2613, 3011
Mox20I TGGCCA 1 cut(s) 2262
Mph1103I ATGCAT 2 cut(s) 742, 1723
MroI TCCGGA 2 cut(s) 699, 819
MroXI GAANNNNTTC 2 cut(s) 117, 502
MscI TGGCCA 1 cut(s) 2262
MslI CAYNNNNRTG 2 cut(s) 1599, 1716
Msp20I TGGCCA 1 cut(s) 2262
MspA1I CMGCKG 4 cut(s) 326, 734, 2744, 3077
MspCI CTTAAG 1 cut(s) 1639
MspI CCGG 2 cut(s) 700, 820
MspR9I CCNGG 8 cut(s) 834, 1130, 1415, 1525, 1677, 1942, 2648, 3062
MunI CAATTG 2 cut(s) 347, 584
Mva1269I GAATGC 1 cut(s) 2771
MvaI CCWGG 8 cut(s) 834, 1130, 1415, 1525, 1677, 1942, 2648, 3062
MvnI CGCG 1 cut(s) 1426
MwoI GCNNNNNNNGC 9 cut(s) 122, 131, 233, 242, 848, 1076, 1849, 2662, 2888
NcoI CCATGG 2 cut(s) 14, 1137
NdeII GATC 9 cut(s) 696, 1666, 1855, 1937, 2032, 2065, 2491, 2524, 2924
NheI GCTAGC 2 cut(s) 2947, 2963
NlaIV GGNNCC 4 cut(s) 358, 1476, 1939, 3125
NmuCI GTSAC 2 cut(s) 1164, 2246
NsiI ATGCAT 2 cut(s) 742, 1723
NspI RCATGY 5 cut(s) 227, 376, 1066, 1659, 2646
OliI CACNNNNGTG 1 cut(s) 1599
PaeI GCATGC 1 cut(s) 376
PauI GCGCGC 1 cut(s) 1424
PciI ACATGT 1 cut(s) 1062
PciSI GCTCTTC 2 cut(s) 393, 2274
PcsI WCGNNNNNNNCGW 3 cut(s) 391, 2987, 3020
PctI GAATGC 1 cut(s) 2771
PdmI GAANNNNTTC 2 cut(s) 117, 502
PflFI GACNNNGTC 2 cut(s) 74, 2843
PflMI CCANNNNNTGG 2 cut(s) 1676, 1934
PfoI TCCNGGA 1 cut(s) 1940
PleI GAGTC 7 cut(s) 881, 914, 940, 1003, 1150, 1501, 2479
PpsI GAGTC 7 cut(s) 881, 914, 940, 1003, 1150, 1501, 2479
PscI ACATGT 1 cut(s) 1062
PshAI GACNNNNGTC 1 cut(s) 2374
PsiI TTATAA 1 cut(s) 1923
Psp6I CCWGG 8 cut(s) 832, 1128, 1413, 1523, 1675, 1940, 2646, 3060
PspEI GGTNACC 1 cut(s) 828
PspFI CCCAGC 3 cut(s) 255, 950, 3101
PspGI CCWGG 8 cut(s) 832, 1128, 1413, 1523, 1675, 1940, 2646, 3060
PspN4I GGNNCC 4 cut(s) 358, 1476, 1939, 3125
PspPI GGNCC 6 cut(s) 4, 836, 1126, 1474, 3029, 3191
PstI CTGCAG 4 cut(s) 40, 2289, 2607, 2658
PstNI CAGNNNCTG 2 cut(s) 805, 839
PsuI RGATCY 4 cut(s) 696, 1666, 1855, 1937
PsyI GACNNNGTC 2 cut(s) 74, 2843
PteI GCGCGC 1 cut(s) 1424
PvuII CAGCTG 3 cut(s) 326, 2744, 3077
RsaI GTAC 2 cut(s) 672, 1660
RsaNI GTAC 2 cut(s) 671, 1659
RseI CAYNNNNRTG 2 cut(s) 1599, 1716
SalI GTCGAC 1 cut(s) 1960
SapI GCTCTTC 2 cut(s) 393, 2274
Sau3AI GATC 9 cut(s) 696, 1666, 1855, 1937, 2032, 2065, 2491, 2524, 2924
Sau96I GGNCC 6 cut(s) 4, 836, 1126, 1474, 3029, 3191
SchI GAGTC 7 cut(s) 881, 914, 940, 1003, 1151, 1502, 2480
ScrFI CCNGG 8 cut(s) 834, 1130, 1415, 1525, 1677, 1942, 2648, 3062
SduI GDGCHC 4 cut(s) 361, 1266, 1596, 3102
SexAI ACCWGGT 1 cut(s) 1523
SfcI CTRYAG 7 cut(s) 36, 1179, 1308, 2285, 2603, 2654, 3093
SinI GGWCC 3 cut(s) 4, 1474, 3029
SmiMI CAYNNNNRTG 2 cut(s) 1599, 1716
SmlI CTYRAG 7 cut(s) 362, 680, 692, 1013, 1639, 2414, 2443
SmoI CTYRAG 7 cut(s) 362, 680, 692, 1013, 1639, 2414, 2443
SphI GCATGC 1 cut(s) 376
SsiI CCGC 7 cut(s) 278, 732, 808, 826, 1106, 1841, 2240
SspI AATATT 1 cut(s) 1537
SspMI CTAG 9 cut(s) 495, 815, 878, 1778, 2591, 2936, 2948, 2964, 3140
StyD4I CCNGG 8 cut(s) 832, 1128, 1413, 1523, 1675, 1940, 2646, 3060
StyI CCWWGG 3 cut(s) 14, 1137, 1431
TaaI ACNGT 6 cut(s) 200, 928, 1309, 1490, 1601, 2046
TaiI ACGT 4 cut(s) 1908, 1959, 2984, 3026
TaqI TCGA 8 cut(s) 394, 450, 727, 1705, 1961, 2091, 2838, 3014
TaqII GACCGA 1 cut(s) 3017
TatI WGTACW 1 cut(s) 1658
TauI GCSGC 1 cut(s) 811
TscAI CASTG 4 cut(s) 643, 2015, 2147, 2389
TseFI GTSAC 2 cut(s) 1164, 2246
Tsp45I GTSAC 2 cut(s) 1164, 2246
TspGWI ACGGA 2 cut(s) 1726, 1965
TspRI CASTG 4 cut(s) 643, 2015, 2147, 2389
Tth111I GACNNNGTC 2 cut(s) 74, 2843
Van91I CCANNNNNTGG 2 cut(s) 1676, 1934
Vha464I CTTAAG 1 cut(s) 1639
VpaK11BI GGWCC 3 cut(s) 4, 1474, 3029
XapI RAATTY 8 cut(s) 446, 716, 754, 1682, 2096, 2192, 2335, 2689
XceI RCATGY 5 cut(s) 227, 376, 1066, 1659, 2646
XcmI CCANNNNNNNNNTGG 1 cut(s) 466
XmiI GTMKAC 1 cut(s) 1961
XmnI GAANNNNTTC 2 cut(s) 117, 502
XspI CTAG 9 cut(s) 495, 815, 878, 1778, 2591, 2936, 2948, 2964, 3140
Zsp2I ATGCAT 2 cut(s) 742, 1723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.