Rw2G014400

Filament-like plant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0007037
Physical Location & Seq
Reverse (-)
16172216 .. 16177631
5416 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G014400.1

Sequence Viewer

Length: 3051 bp
ATGGAGGCAATTCTTAATGAGAAGGCAGAGCTAGAGAAAGATTTGAAAGCTTTAAGTGATAAGCTGGCTTCAGCTCTCTCTGATTGTAAGAATAAAGATGAACTTGTGAAGAAACATGCCAACATGGCACAGGAAGCTGTTCAAGGCTGGGAGAAGGTAGAAGCAGAAGCAGGGTTTCTGAAGCAAGAATTAGATAAATCTTTGCAACTCAGAGATGCCGGTGAAGAAAGAATATCTCAATTGGATGGAGCTCTCAAGGAGTGCATGCAGCAGCTGCGATATGTTCGAGATGAACAACAGCAAAGGGTTCATGATGCTGTGATGAAGACAACAAGGGAATTTGAGAAATCCCAGATGGTATTGGAAGAGAAGCTAGCAGAGACCAGTAAAAGGCTTTCTAAAATAGGTGCTGAAAACACCCATCTTAGCAAGGCTCTTTCAGTGAAGGAAAAGTTGACTGAAGATTTAAGAAAACAATTGAGTCAGATGGAAGCTGATTTGAATGCACTTATGGCTAGATTAGAGTCCACTGAGAAAGACAATGCTTCTTTGACATATGAGGTTCGAGTGCTTGAGAAAGAACTTGAGATCAGGAATGAGGAGAGAGAATTTAATCGTCGGACTGCTGATGCATCACACAAGCAACACCTTGAGGGTGCAAAAAAAATTGCAAAGTTAGAATCAGAATGTCAGAGGTTGCGTCTCCTGGTCAGGAAGCGGTTGCCAGGTCCTGCTGCCTTGGTTAAAATGAAAAATGAAGTTGAAATGCTCGGAAGAGATTCTGTTGACATGAGGAGGAGAAGTTTGAGCCCAAATGGTTTAAGGTATGACTCTACTGCTGATAAATTTCCTGAGGCTCCCACCAAAAGGATCAATTTTCTAACCGAGCAGTTATGTGCTATGGAAGAAGAAAATGCAATTCTCAAGGAAGCACTCAATAAGAAGATGAATGAGTTACAGTTTTCCAAAAACATGTATAACCGTGCAGCCTCCAAATTATCACAAGTTGAAACAGCGGTTGGAGAATCCCCAAGAGGCACTCTTATGCCACATGAATCCTCTGTAGCATCTATGTCTGATATTGGTAGCGATGATAAGGCTAGTTGTGCAGAATCATGGGCTTCTGCTTTGATTACAGAATTGGAGCATTTTAGAAACGAAAAGCAAAAAGGCTTGCCGACGTGCAAAACTGTTGGTGCTTCGGACATAAATCTGATGGATGACTTCGTTGAAATGGAAAAACTAGCAGTGGTCTCTGCTGATAAAGTAAGTGTTGGTTCTTATGCTTCCTCACCAGCTAATACATTTGCTGGCCATTTGGAAAATCAGTATTCCTCGGAACTAGGGGGTAGCGATATAGTTCCTGTATCTGACAGTGAGTCAGGCTTCAGTTTGTCAAACCGGGAGACCAGCCATATTGTTGACGTCAAAGCTCCTCATTGGCTCCAGGATATAGTGAAATTGGTGTTAGAGCACAGCCGTGTTGCAGGAAGAAGCCCTGAACAAATACAAGAGGATATAAGAATAGCTTTGGCAACTACAACCAATCCTTCTTCTGCTAAAAGCTGCATCTCATGGAAAAGCTCAAATCAGTGTCCAGTAACTGATTCACCCAATGGAGTAAGTGATCAGCAGTTACAACCAGATCTTAAGAAATCAATATGCAAAATAATTGAGCTTATTGAAGGAATCAGTTTGCCATCTCCAGATTATAACACAGACGCCAGATACAAGAATTCAGAAACACAGGCAGGCTACATGGTTCGTGTTTTCCAGTGGAAAACTTCTGAACTTGGCACTCTTCTACAACAATTTGTTCATGCTTGTTATAATCTGTTAAATGGAAAGGCTGGTCTTGATAAATTTGCCGAAGAACTAACTACGGCTTTGGACTGGATTTTGAACCACTGCTTTTCACTTCAAGATGTTTCAAGCATGAAGGATGCAATTAAGAAGCAATTTGACTGGGATGATACACGAAGTGAAAGCGAGGCAGAAGTTGGAATGGTTGGTCACTATTCAGATACAGACAAATTTCGAGTTCTCAGAGCACACACATCATTTAGGCCTATGGCTGCTTCTTCAAATGGCCACGGCAGTCAAATAGAAGAGTTGCAGTCCAATTTGGTCCAAGAAAACCAAAAGTTAAAGGATGAACTTGAGAATACAGAATCTGGCAAAAAAGAGTTGGAAGGCAGACTTCAGTCAGCCAGTGATAAGAGTGAATTCCTGATCAATCAGCTTAAGGAATCCGAGAAAATTATTGCCAGCTTGCAAGAAGAGTTACAAAGTTTAAGAGACTCGAAGAGTTTGATGGAGGATCAACTCAAAACTCAAAAGACAGTGAATGAAGATCTTGACACGCAGCTCACAGTGGCCAGAGTTGAATTGAGTGAAACTCATCAGAAGTTTTCATCTCTAGAAGATGAGCTCGAGAACAAATACAACTGCTGTGAAGAATTGGAAGCTTCATGCGTTGACCTGCAGCTTCAGCTCGAAAGTATGAAGACAAAAAGCCCTGACTCCAATCTTAACCAGGAGGAAAGGCAAGACCAAACTGAATGGGAGATAACAGCTGCTTCAGAAAAGTTGGCAGAATGCCAAGAGACTATACTTAACCTTGGGAAGCAGTTGAAGGCAATGGCTGCACCAAGAGAAGCAGCCCTTTTTGACAAGGTCATTGCTGATCCCGCTGATGTAAATACCACAACAACCGTAGCCACTGGCGCTACCTCAAACAAGACCATGAGCCGCCGGTCCTCTCTACTTGATCAAATGCTAGCAGAAGATGGCACTACGACCAAAGATTTTATATCTCCCAAGACAAAAGAAGTCGACAATAATTTCACCTCCACATTTGGTCCCAAGAGGGTAGTAGAGCCCCTCGAGAATATCCTCAATTTAAATGTGAAGCACCAGGATGAGAATGCTGCTACTGGTTCATTTGCTCTGGTGCCTAGCAAGAAACGAAGTGGGAGTTTATGGAGGAAGCTACTCTGGAGACGCACAAAAAGTAGCAGCAAGAAAGCACCCCTTCCGATCGCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FPP

Protein Analysis

1016

Amino Acids

113.81

Weight (kDa)

5.33

Isoelectric Point (pI)

51.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPP PF05911 32 - 888 2.9e-290 Filament-like plant protein, long coiled-coil
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1713, 1830
AatII GACGTC 1 cut(s) 1428
Acc36I ACCTGC 1 cut(s) 2490
AccB1I GGYRCC 1 cut(s) 2953
AccI GTMKAC 1 cut(s) 2835
AciI CCGC 4 cut(s) 718, 1016, 2691, 2752
AclWI GGATC 3 cut(s) 878, 2328, 2681
AcoI YGGCCR 3 cut(s) 1312, 2089, 2376
AcsI RAATTY 7 cut(s) 338, 608, 845, 1735, 1862, 2033, 2225
AcuI CTGAAG 7 cut(s) 54, 200, 480, 1372, 2186, 2474, 2565
AcyI GRCGYC 2 cut(s) 1425, 1722
AdeI CACNNNGTG 1 cut(s) 1982
AfiI CCNNNNNNNGG 2 cut(s) 390, 867
AflII CTTAAG 2 cut(s) 1649, 2243
AflIII ACRYGT 1 cut(s) 972
AhdI GACNNNNNGTC 1 cut(s) 1378
AjiI CACGTC 1 cut(s) 1182
AjnI CCWGG 5 cut(s) 705, 724, 1446, 2535, 2916
AjuI GAANNNNNNNTTGG 2 cut(s) 1002, 1034
AleI CACNNNNGTG 1 cut(s) 1479
Alw21I GWGCWC 4 cut(s) 253, 1476, 2053, 2433
Alw26I GTCTC 7 cut(s) 374, 707, 1258, 1400, 2292, 2600, 2995
AlwI GGATC 3 cut(s) 878, 2328, 2681
AlwNI CAGNNNCTG 4 cut(s) 274, 731, 1604, 2174
Ama87I CYCGRG 2 cut(s) 2432, 2885
AoxI GGCC 4 cut(s) 1312, 2066, 2089, 2376
ApoI RAATTY 7 cut(s) 338, 608, 845, 1735, 1862, 2033, 2225
Asp700I GAANNNNTTC 2 cut(s) 138, 778
AspLEI GCGC 1 cut(s) 2729
AspS9I GGNCC 4 cut(s) 728, 2128, 2757, 2861
AsuC2I CCSGG 1 cut(s) 1403
AsuHPI GGTGA 4 cut(s) 233, 1284, 1602, 2839
AsuNHI GCTAGC 2 cut(s) 373, 2779
AvaI CYCGRG 2 cut(s) 2432, 2885
AvaII GGWCC 4 cut(s) 728, 2128, 2757, 2861
AxyI CCTNAGG 1 cut(s) 852
BalI TGGCCA 3 cut(s) 1314, 2091, 2378
BanI GGYRCC 1 cut(s) 2953
BanII GRGCYC 4 cut(s) 253, 812, 2433, 2883
BbsI GAAGAC 2 cut(s) 332, 2513
Bbv12I GWGCWC 4 cut(s) 253, 1476, 2053, 2433
BccI CCATC 8 cut(s) 239, 349, 429, 481, 1210, 1708, 2308, 2783
BceAI ACGGC 3 cut(s) 1464, 1899, 2110
BciT130I CCWGG 5 cut(s) 707, 726, 1448, 2537, 2918
BclI TGATCA 3 cut(s) 1627, 2232, 2770
BcnI CCSGG 1 cut(s) 1403
BcoDI GTCTC 7 cut(s) 374, 707, 1258, 1400, 2292, 2600, 2995
BfaI CTAG 9 cut(s) 32, 374, 516, 1101, 1244, 1343, 2420, 2780, 2958
BfmI CTRYAG 2 cut(s) 1062, 2483
BfoI RGCGCY 1 cut(s) 2730
BfrI CTTAAG 2 cut(s) 1649, 2243
BfuAI ACCTGC 1 cut(s) 2490
BglI GCCNNNNNGGC 1 cut(s) 125
BglII AGATCT 2 cut(s) 1645, 2353
Bme1390I CCNGG 6 cut(s) 707, 726, 1403, 1448, 2537, 2918
Bme18I GGWCC 4 cut(s) 728, 2128, 2757, 2861
BmeRI GACNNNNNGTC 1 cut(s) 1378
BmeT110I CYCGRG 2 cut(s) 2432, 2885
BmgBI CACGTC 1 cut(s) 1182
BmgT120I GGNCC 4 cut(s) 728, 2128, 2757, 2861
BmiI GGNNCC 4 cut(s) 858, 1445, 2863, 2955
BmrFI CCNGG 6 cut(s) 707, 726, 1403, 1448, 2537, 2918
BmrI ACTGGG 1 cut(s) 1975
BmsI GCATC 7 cut(s) 205, 304, 619, 641, 1076, 1578, 1933
BmtI GCTAGC 2 cut(s) 377, 2783
BmuI ACTGGG 1 cut(s) 1975
BoxI GACNNNNGTC 1 cut(s) 2203
BpiI GAAGAC 2 cut(s) 332, 2513
BplI GAGNNNNNCTC 2 cut(s) 2383, 2415
BpmI CTGGAG 3 cut(s) 1430, 1689, 3019
BpuEI CTTGAG 6 cut(s) 239, 593, 605, 671, 908, 2180
BpuMI CCSGG 1 cut(s) 1403
BsaHI GRCGYC 2 cut(s) 1425, 1722
BsaI GGTCTC 3 cut(s) 374, 1258, 1400
BsaJI CCNNGG 4 cut(s) 738, 1335, 2092, 2620
BsaXI ACNNNNNCTCC 2 cut(s) 787, 817
Bsc4I CCNNNNNNNGG 2 cut(s) 390, 867
Bse118I RCCGGY 2 cut(s) 218, 2754
Bse1I ACTGG 8 cut(s) 384, 1598, 1774, 1898, 1970, 2211, 2728, 2941
Bse21I CCTNAGG 1 cut(s) 852
Bse3DI GCAATG 2 cut(s) 2646, 2679
BseBI CCWGG 5 cut(s) 707, 726, 1448, 2537, 2918
BseDI CCNNGG 4 cut(s) 738, 1335, 2092, 2620
BseGI GGATG 6 cut(s) 250, 1225, 1948, 1975, 2158, 2926
BseLI CCNNNNNNNGG 2 cut(s) 390, 867
BseMI GCAATG 2 cut(s) 2646, 2679
BseMII CTCAG 4 cut(s) 223, 522, 843, 2059
BseNI ACTGG 8 cut(s) 384, 1598, 1774, 1898, 1970, 2211, 2728, 2941
BseRI GAGGAG 4 cut(s) 614, 808, 811, 1425
BseYI CCCAGC 1 cut(s) 147
BsgI GTGCAG 3 cut(s) 1005, 1128, 2631
Bsh1285I CGRYCG 1 cut(s) 3042
BshFI GGCC 4 cut(s) 1314, 2068, 2091, 2378
BshNI GGYRCC 1 cut(s) 2953
BsiEI CGRYCG 1 cut(s) 3042
BsiHKAI GWGCWC 4 cut(s) 253, 1476, 2053, 2433
BsiHKCI CYCGRG 2 cut(s) 2432, 2885
BsiSI CCGG 3 cut(s) 219, 1402, 2755
BslFI GGGAC 1 cut(s) 2847
BslI CCNNNNNNNGG 2 cut(s) 390, 867
BsmAI GTCTC 7 cut(s) 374, 707, 1258, 1400, 2292, 2600, 2995
BsmBI CGTCTC 2 cut(s) 707, 2995
BsmFI GGGAC 1 cut(s) 2847
BsmI GAATGC 3 cut(s) 508, 2603, 2932
BsnI GGCC 4 cut(s) 1314, 2068, 2091, 2378
Bso31I GGTCTC 3 cut(s) 374, 1258, 1400
BsoBI CYCGRG 2 cut(s) 2432, 2885
Bsp1286I GDGCHC 6 cut(s) 253, 812, 1476, 2053, 2433, 2883
BspACI CCGC 4 cut(s) 718, 1016, 2691, 2752
BspANI GGCC 4 cut(s) 1314, 2068, 2091, 2378
BspCNI CTCAG 4 cut(s) 222, 523, 844, 2058
BspHI TCATGA 2 cut(s) 310, 3047
BspLI GGNNCC 4 cut(s) 858, 1445, 2863, 2955
BspMAI CTGCAG 1 cut(s) 2487
BspMI ACCTGC 1 cut(s) 2490
BspOI GCTAGC 2 cut(s) 377, 2783
BspPI GGATC 3 cut(s) 878, 2328, 2681
BspT107I GGYRCC 1 cut(s) 2953
BspTI CTTAAG 2 cut(s) 1649, 2243
BspTNI GGTCTC 3 cut(s) 374, 1258, 1400
BsrDI GCAATG 2 cut(s) 2646, 2679
BsrFI RCCGGY 2 cut(s) 218, 2754
BsrI ACTGG 8 cut(s) 384, 1598, 1774, 1898, 1970, 2211, 2728, 2941
BssAI RCCGGY 2 cut(s) 218, 2754
BssECI CCNNGG 4 cut(s) 738, 1335, 2092, 2620
BssNI GRCGYC 2 cut(s) 1425, 1722
BssT1I CCWWGG 2 cut(s) 738, 2620
Bst2UI CCWGG 5 cut(s) 707, 726, 1448, 2537, 2918
Bst4CI ACNGT 7 cut(s) 960, 983, 1192, 1376, 2344, 2374, 2716
Bst6I CTCTTC 6 cut(s) 360, 769, 1806, 2103, 2274, 2300
BstACI GRCGYC 2 cut(s) 1425, 1722
BstAFI CTTAAG 2 cut(s) 1649, 2243
BstAPI GCANNNNNTGC 2 cut(s) 274, 2645
BstC8I GCNNGC 9 cut(s) 66, 266, 375, 1175, 1312, 1753, 2269, 2273, 2781
BstDEI CTNAG 5 cut(s) 209, 425, 531, 852, 2045
BstDSI CCRYGG 1 cut(s) 2092
BstF5I GGATG 6 cut(s) 250, 1225, 1948, 1975, 2158, 2926
BstH2I RGCGCY 1 cut(s) 2730
BstHHI GCGC 1 cut(s) 2729
BstMAI GTCTC 7 cut(s) 374, 707, 1258, 1400, 2292, 2600, 2995
BstMCI CGRYCG 1 cut(s) 3042
BstMWI GCNNNNNNNGC 9 cut(s) 125, 134, 274, 512, 1106, 2491, 2645, 2690, 2726
BstNI CCWGG 5 cut(s) 707, 726, 1448, 2537, 2918
BstNSI RCATGY 3 cut(s) 119, 268, 976
BstPAI GACNNNNGTC 1 cut(s) 2203
BstSCI CCNGG 6 cut(s) 705, 724, 1401, 1446, 2535, 2916
BstSFI CTRYAG 2 cut(s) 1062, 2483
BstV2I GAAGAC 2 cut(s) 332, 2513
BstX2I RGATCY 2 cut(s) 1645, 2353
BstYI RGATCY 2 cut(s) 1645, 2353
Bsu36I CCTNAGG 1 cut(s) 852
BsuRI GGCC 4 cut(s) 1314, 2068, 2091, 2378
BtgI CCRYGG 1 cut(s) 2092
BtgZI GCGATG 1 cut(s) 1104
BtrI CACGTC 1 cut(s) 1182
BtsCI GGATG 6 cut(s) 250, 1225, 1948, 1975, 2158, 2926
BtsI GCAGTG 2 cut(s) 1254, 1906
BveI ACCTGC 1 cut(s) 2490
Cac8I GCNNGC 9 cut(s) 66, 266, 375, 1175, 1312, 1753, 2269, 2273, 2781
CaiI CAGNNNCTG 4 cut(s) 274, 731, 1604, 2174
CciI TCATGA 2 cut(s) 310, 3047
CfoI GCGC 1 cut(s) 2729
Cfr10I RCCGGY 2 cut(s) 218, 2754
Cfr13I GGNCC 4 cut(s) 728, 2128, 2757, 2861
CseI GACGC 3 cut(s) 689, 1730, 3012
DdeI CTNAG 5 cut(s) 209, 425, 531, 852, 2045
DraI TTTAAA 1 cut(s) 2904
DraIII CACNNNGTG 1 cut(s) 1982
DriI GACNNNNNGTC 1 cut(s) 1378
EaeI YGGCCR 3 cut(s) 1312, 2089, 2376
Eam1104I CTCTTC 6 cut(s) 360, 769, 1806, 2103, 2274, 2300
Eam1105I GACNNNNNGTC 1 cut(s) 1378
EarI CTCTTC 6 cut(s) 360, 769, 1806, 2103, 2274, 2300
Ecl136II GAGCTC 2 cut(s) 251, 2431
Eco130I CCWWGG 2 cut(s) 738, 2620
Eco147I AGGCCT 1 cut(s) 2068
Eco24I GRGCYC 4 cut(s) 253, 812, 2433, 2883
Eco31I GGTCTC 3 cut(s) 374, 1258, 1400
Eco47I GGWCC 4 cut(s) 728, 2128, 2757, 2861
Eco53kI GAGCTC 2 cut(s) 251, 2431
Eco57I CTGAAG 7 cut(s) 54, 200, 480, 1372, 2186, 2474, 2565
Eco81I CCTNAGG 1 cut(s) 852
Eco88I CYCGRG 2 cut(s) 2432, 2885
EcoICRI GAGCTC 2 cut(s) 251, 2431
EcoO109I RGGNCCY 1 cut(s) 728
EcoRI GAATTC 2 cut(s) 1735, 2225
EcoRII CCWGG 5 cut(s) 705, 724, 1446, 2535, 2916
EcoT14I CCWWGG 2 cut(s) 738, 2620
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 4 cut(s) 253, 812, 2433, 2883
ErhI CCWWGG 2 cut(s) 738, 2620
Esp3I CGTCTC 2 cut(s) 707, 2995
FaqI GGGAC 1 cut(s) 2847
FauI CCCGC 1 cut(s) 2698
FauNDI CATATG 1 cut(s) 556
FbaI TGATCA 3 cut(s) 1627, 2232, 2770
FblI GTMKAC 1 cut(s) 2835
FokI GGATG 6 cut(s) 257, 1232, 1955, 1982, 2165, 2933
FriOI GRGCYC 4 cut(s) 253, 812, 2433, 2883
FspBI CTAG 9 cut(s) 32, 374, 516, 1101, 1244, 1343, 2420, 2780, 2958
GlaI GCGC 1 cut(s) 2728
GsaI CCCAGC 1 cut(s) 151
GsuI CTGGAG 3 cut(s) 1430, 1689, 3019
HaeII RGCGCY 1 cut(s) 2730
HaeIII GGCC 4 cut(s) 1314, 2068, 2091, 2378
HapII CCGG 3 cut(s) 219, 1402, 2755
HgaI GACGC 3 cut(s) 689, 1730, 3012
HhaI GCGC 1 cut(s) 2729
Hin1I GRCGYC 2 cut(s) 1425, 1722
Hin6I GCGC 1 cut(s) 2727
HinP1I GCGC 1 cut(s) 2727
HincII GTYRAC 5 cut(s) 456, 787, 1423, 2479, 2836
HindII GTYRAC 5 cut(s) 456, 787, 1423, 2479, 2836
HindIII AAGCTT 2 cut(s) 48, 2466
HpaII CCGG 3 cut(s) 219, 1402, 2755
HphI GGTGA 4 cut(s) 233, 1284, 1602, 2839
Hpy166II GTNNAC 6 cut(s) 456, 528, 787, 1423, 2479, 2836
Hpy8I GTNNAC 6 cut(s) 456, 528, 787, 1423, 2479, 2836
Hpy99I CGWCG 2 cut(s) 621, 1183
HpyAV CCTTC 9 cut(s) 16, 148, 439, 1560, 1679, 1933, 2186, 2629, 3044
HpyCH4III ACNGT 7 cut(s) 960, 983, 1192, 1376, 2344, 2374, 2716
HpyCH4IV ACGT 2 cut(s) 1181, 1425
HpyF10VI GCNNNNNNNGC 9 cut(s) 125, 134, 274, 512, 1106, 2491, 2645, 2690, 2726
HpyF3I CTNAG 5 cut(s) 209, 425, 531, 852, 2045
HpySE526I ACGT 2 cut(s) 1181, 1425
Hsp92I GRCGYC 2 cut(s) 1425, 1722
HspAI GCGC 1 cut(s) 2727
Ksp22I TGATCA 3 cut(s) 1627, 2232, 2770
LmnI GCTCC 5 cut(s) 248, 862, 1144, 1438, 1449
LweI GCATC 7 cut(s) 205, 304, 619, 641, 1076, 1578, 1933
MaeI CTAG 9 cut(s) 32, 374, 516, 1101, 1244, 1343, 2420, 2780, 2958
MaeII ACGT 2 cut(s) 1181, 1425
MaeIII GTNAC 5 cut(s) 954, 1600, 1635, 2012, 2283
MfeI CAATTG 2 cut(s) 239, 476
MflI RGATCY 2 cut(s) 1645, 2353
MhlI GDGCHC 6 cut(s) 253, 812, 1476, 2053, 2433, 2883
MlsI TGGCCA 3 cut(s) 1314, 2091, 2378
MluNI TGGCCA 3 cut(s) 1314, 2091, 2378
MlyI GAGTC 6 cut(s) 490, 533, 824, 1388, 2294, 2516
MmeI TCCRAC 4 cut(s) 599, 1000, 1981, 2169
Mox20I TGGCCA 3 cut(s) 1314, 2091, 2378
Mph1103I ATGCAT 1 cut(s) 634
MroXI GAANNNNTTC 2 cut(s) 138, 778
MscI TGGCCA 3 cut(s) 1314, 2091, 2378
MslI CAYNNNNRTG 3 cut(s) 1043, 1479, 2919
Msp20I TGGCCA 3 cut(s) 1314, 2091, 2378
MspA1I CMGCKG 4 cut(s) 274, 1016, 2576, 2693
MspCI CTTAAG 2 cut(s) 1649, 2243
MspI CCGG 3 cut(s) 219, 1402, 2755
MspR9I CCNGG 6 cut(s) 707, 726, 1403, 1448, 2537, 2918
MunI CAATTG 2 cut(s) 239, 476
Mva1269I GAATGC 3 cut(s) 508, 2603, 2932
MvaI CCWGG 5 cut(s) 707, 726, 1448, 2537, 2918
MwoI GCNNNNNNNGC 9 cut(s) 125, 134, 274, 512, 1106, 2491, 2645, 2690, 2726
NciI CCSGG 1 cut(s) 1403
NdeI CATATG 1 cut(s) 556
NheI GCTAGC 2 cut(s) 373, 2779
NlaIV GGNNCC 4 cut(s) 858, 1445, 2863, 2955
NmuCI GTSAC 1 cut(s) 2012
NsiI ATGCAT 1 cut(s) 634
NspI RCATGY 3 cut(s) 119, 268, 976
OliI CACNNNNGTG 1 cut(s) 1479
PaeI GCATGC 1 cut(s) 268
PaeR7I CTCGAG 2 cut(s) 2432, 2885
PagI TCATGA 2 cut(s) 310, 3047
PceI AGGCCT 1 cut(s) 2068
PciI ACATGT 1 cut(s) 972
PctI GAATGC 3 cut(s) 508, 2603, 2932
PdmI GAANNNNTTC 2 cut(s) 138, 778
PfeI GAWTC 9 cut(s) 680, 779, 1025, 1055, 1112, 1607, 1689, 2171, 2249
PflFI GACNNNGTC 1 cut(s) 2675
PfoI TCCNGGA 1 cut(s) 1446
Ple19I CGATCG 1 cut(s) 3042
PleI GAGTC 6 cut(s) 489, 532, 824, 1387, 2294, 2516
PpsI GAGTC 6 cut(s) 489, 532, 824, 1387, 2294, 2516
PpuMI RGGWCCY 1 cut(s) 728
PscI ACATGT 1 cut(s) 972
PshAI GACNNNNGTC 1 cut(s) 2203
PsiI TTATAA 2 cut(s) 1713, 1830
Psp124BI GAGCTC 2 cut(s) 253, 2433
Psp5II RGGWCCY 1 cut(s) 728
Psp6I CCWGG 5 cut(s) 705, 724, 1446, 2535, 2916
PspFI CCCAGC 1 cut(s) 147
PspGI CCWGG 5 cut(s) 705, 724, 1446, 2535, 2916
PspN4I GGNNCC 4 cut(s) 858, 1445, 2863, 2955
PspPI GGNCC 4 cut(s) 728, 2128, 2757, 2861
PspPPI RGGWCCY 1 cut(s) 728
PstI CTGCAG 1 cut(s) 2487
PstNI CAGNNNCTG 4 cut(s) 274, 731, 1604, 2174
PsuI RGATCY 2 cut(s) 1645, 2353
PsyI GACNNNGTC 1 cut(s) 2675
PvuI CGATCG 1 cut(s) 3042
PvuII CAGCTG 2 cut(s) 274, 2576
RseI CAYNNNNRTG 3 cut(s) 1043, 1479, 2919
SacI GAGCTC 2 cut(s) 253, 2433
SalI GTCGAC 1 cut(s) 2834
Sau96I GGNCC 4 cut(s) 728, 2128, 2757, 2861
SchI GAGTC 6 cut(s) 490, 533, 824, 1388, 2294, 2516
ScrFI CCNGG 6 cut(s) 707, 726, 1403, 1448, 2537, 2918
SduI GDGCHC 6 cut(s) 253, 812, 1476, 2053, 2433, 2883
SfaNI GCATC 7 cut(s) 205, 304, 619, 641, 1076, 1578, 1933
SfcI CTRYAG 2 cut(s) 1062, 2483
Sfr274I CTCGAG 2 cut(s) 2432, 2885
SinI GGWCC 4 cut(s) 728, 2128, 2757, 2861
SlaI CTCGAG 2 cut(s) 2432, 2885
SmiI ATTTAAAT 1 cut(s) 2904
SmiMI CAYNNNNRTG 3 cut(s) 1043, 1479, 2919
SphI GCATGC 1 cut(s) 268
SseBI AGGCCT 1 cut(s) 2068
SsiI CCGC 4 cut(s) 718, 1016, 2691, 2752
SspMI CTAG 9 cut(s) 32, 374, 516, 1101, 1244, 1343, 2420, 2780, 2958
SstI GAGCTC 2 cut(s) 253, 2433
StuI AGGCCT 1 cut(s) 2068
StyD4I CCNGG 6 cut(s) 705, 724, 1401, 1446, 2535, 2916
StyI CCWWGG 2 cut(s) 738, 2620
SwaI ATTTAAAT 1 cut(s) 2904
TaaI ACNGT 7 cut(s) 960, 983, 1192, 1376, 2344, 2374, 2716
TaiI ACGT 2 cut(s) 1184, 1428
TaqI TCGA 8 cut(s) 286, 565, 2038, 2303, 2433, 2496, 2835, 2886
TauI GCSGC 1 cut(s) 2754
TfiI GAWTC 9 cut(s) 680, 779, 1025, 1055, 1112, 1607, 1689, 2171, 2249
TseFI GTSAC 1 cut(s) 2012
Tsp45I GTSAC 1 cut(s) 2012
Tth111I GACNNNGTC 1 cut(s) 2675
Vha464I CTTAAG 2 cut(s) 1649, 2243
VpaK11BI GGWCC 4 cut(s) 728, 2128, 2757, 2861
XapI RAATTY 7 cut(s) 338, 608, 845, 1735, 1862, 2033, 2225
XbaI TCTAGA 1 cut(s) 2419
XceI RCATGY 3 cut(s) 119, 268, 976
XhoI CTCGAG 2 cut(s) 2432, 2885
XmiI GTMKAC 1 cut(s) 2835
XmnI GAANNNNTTC 2 cut(s) 138, 778
XspI CTAG 9 cut(s) 32, 374, 516, 1101, 1244, 1343, 2420, 2780, 2958
ZraI GACGTC 1 cut(s) 1426
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.