FvH4_1g16580

Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
9552093 .. 9557456
5364 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g16580.t5

Sequence Viewer

Length: 1542 bp
ATGGATGAGAAATCCAGTGACCCATCACCTCAACCTGCTGCCGTTCCATATGCTCAAGATAATGCCACTCAAAATGCTGAGAGGCCAAAGGGGGTTTCTGGGGCTCTTGGATCGTTTACGAAAGGTATACTTAACAGATCGCAGTCTGCAGTCAAGGCTGTGCAGGTCAAGGCTCGCCATCTCGTCTCTCAAAACAAAAGAAGATACCAGGAGGGTGGTTTTGATTTAGATATGACATATATTACTGAAAATATAATTGCTATGGGTTTCCCGGCTGGAGATATAAGTTCTGGCTTTTTCGGATATGTTGAGGGGTTTTATCGGAATCATATGGAAGAAGTGATCAGATTTTTTGAAACTAATCACAAGGGACATTATAAAGTATACAATCTTTGTTCAGAGAGGTTATATGATGCATCGCGATTTGAGGGGAAGGCTGCAAGTTTCCCATTTGATGATCATAACTGCCCCCCAATTCAACTTATTGGATCCTTCTGTCAAAGTGCTCATTCATGGTTAAAGGAGGATATTGAAAATGTTGTGGTTGTTCATTGTAAAGCTGGTATGGCAAGGACAGGAGTAATGATATGTAGCCTTCTCCTATACCTTAAGTTCTTTCCTACGGCTGAGGAGGCCATGTATTACTATAACAATAAAAGATGTGTAGATGGAAAGGCTATGGTTCTTCCGAGTCAGATTAGGTACGTGAAATATTTTGACATTATCTCAAGAAAATTCAATGGAGAATGTCCTCCTCGAAGGTGCATGCTCAGGGGATTCCGGATTCACAACTGCCCTTATTGGGTTAGGCCCTGCATTACAGTCTCTGATCATAATGGAATTTTGTTCTCATCAAGAAAGCACTCAAAAACAAAAGATCTAATGCCAGAAGATTTCTGGATCAGTGCACGGAAGAAAGGGATAATCGTTTTCGCTCTACCAGGGGAGCCTGGTCTTGCAGAGTTAGCGGGGGATTTCAAAATCTATTTCCATGATCGCCATGGGGATTTCTATTGCTGGTTAAATACGACGACAGAAAACAACAGAATATTCTTAAAAGCAGATGATCTCGATGGTTTTGACAAGAGAAAATTACCGTCTCCAAGATTCCAGGTTGAAGTGGTCCTTGTAGACTATAGGGGCACTTCTACAGTACCTAAAGCAGAGTCTTTAAGTAGAAAACCCGATGGTAGCTCAAATGATGCCTCTGCTTCAAGTGGTGGTGATGCAGCCAATCTGAATCAAGGAAAAAAAGATGGTGATGATGTATTTTCGGATAGTGAGGGAGAGGAGTCTGGGGATAGAAAGGGCAGGCTAGCAGAAGCTAATATCAAAGCTGGGACTACAGCACCTGATCATTCGTCCAACACAACAGGAAAGCAAATGGAAACTTCAGCTCAAACTGTGGATAATCCAGGCAATGGATCTTTTCAAAAACAAACTTCTGACAGGGCAGGAAATTCTGGAGCAGAAGATATTAGAGCAATAGCTGCTGATGCCTCAGTTTTCTCTTTTGGGGATGAAGATTTTGACAGTGAATGA

Protein Analysis

514

Amino Acids

57.02

Weight (kDa)

6.26

Isoelectric Point (pI)

44.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tc-R-P PF22785 148 - 201 3.5e-07 Polymorphic toxin system, DSP-PTPase phosphatase
PTEN2_C2 PF22918 253 - 339 4.4e-46 PTEN2, C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 378
Acc36I ACCTGC 2 cut(s) 43, 154
AccB7I CCANNNNNTGG 1 cut(s) 1421
AccI GTMKAC 3 cut(s) 127, 384, 1131
AccII CGCG 1 cut(s) 421
AccIII TCCGGA 1 cut(s) 780
AciI CCGC 1 cut(s) 968
AclWI GGATC 5 cut(s) 118, 483, 496, 908, 1432
AcsI RAATTY 3 cut(s) 734, 840, 1459
AcuI CTGAAG 1 cut(s) 1377
AfaI GTAC 2 cut(s) 704, 1155
AfiI CCNNNNNNNGG 2 cut(s) 802, 1421
AflII CTTAAG 1 cut(s) 608
AgsI TTSAA 8 cut(s) 356, 479, 533, 739, 979, 1118, 1215, 1433
AjnI CCWGG 5 cut(s) 207, 940, 949, 1110, 1414
AjuI GAANNNNNNNTTGG 2 cut(s) 79, 111
AluBI AGCT 6 cut(s) 560, 1194, 1325, 1337, 1397, 1490
AluI AGCT 6 cut(s) 560, 1194, 1325, 1337, 1397, 1490
Alw21I GWGCWC 2 cut(s) 508, 910
Alw26I GTCTC 3 cut(s) 190, 829, 1104
Alw44I GTGCAC 1 cut(s) 906
AlwI GGATC 5 cut(s) 118, 483, 496, 908, 1432
AlwNI CAGNNNCTG 2 cut(s) 827, 1352
Aor13HI TCCGGA 1 cut(s) 780
AoxI GGCC 3 cut(s) 83, 633, 809
ApaLI GTGCAC 1 cut(s) 906
ApeKI GCWGC 4 cut(s) 38, 437, 1229, 1490
ApoI RAATTY 3 cut(s) 734, 840, 1459
AspS9I GGNCC 2 cut(s) 810, 1123
AsuC2I CCSGG 1 cut(s) 272
AsuHPI GGTGA 3 cut(s) 18, 1235, 1271
AsuNHI GCTAGC 1 cut(s) 1315
AvaII GGWCC 1 cut(s) 1123
BaeGI GKGCMC 2 cut(s) 910, 1145
BamHI GGATCC 1 cut(s) 488
BanII GRGCYC 1 cut(s) 106
Bbv12I GWGCWC 2 cut(s) 508, 910
BbvCI CCTCAGC 1 cut(s) 627
BbvI GCAGC 4 cut(s) 25, 424, 1241, 1477
BccI CCATC 6 cut(s) 31, 186, 662, 1067, 1181, 1250
BceAI ACGGC 2 cut(s) 26, 639
BciT130I CCWGG 5 cut(s) 209, 942, 951, 1112, 1416
BclI TGATCA 4 cut(s) 342, 457, 829, 1354
BcnI CCSGG 1 cut(s) 272
BcoDI GTCTC 3 cut(s) 190, 829, 1104
BfaI CTAG 1 cut(s) 1316
BfmI CTRYAG 4 cut(s) 147, 1135, 1149, 1344
BfrI CTTAAG 1 cut(s) 608
BfuAI ACCTGC 2 cut(s) 43, 154
BglII AGATCT 1 cut(s) 877
BisI GCNGC 4 cut(s) 39, 438, 1230, 1491
BlsI GCNGC 4 cut(s) 40, 439, 1231, 1492
Bme1390I CCNGG 6 cut(s) 209, 272, 942, 951, 1112, 1416
Bme18I GGWCC 1 cut(s) 1123
BmgT120I GGNCC 2 cut(s) 810, 1123
BmiI GGNNCC 2 cut(s) 490, 948
BmrFI CCNGG 6 cut(s) 209, 272, 942, 951, 1112, 1416
BmsI GCATC 5 cut(s) 403, 425, 1192, 1216, 1486
BmtI GCTAGC 1 cut(s) 1319
BpmI CTGGAG 2 cut(s) 297, 1485
Bpu10I CCTNAGC 2 cut(s) 627, 770
BpuEI CTTGAG 2 cut(s) 39, 712
BpuMI CCSGG 1 cut(s) 272
BsaAI YACGTR 1 cut(s) 706
BsaJI CCNNGG 2 cut(s) 941, 1000
BsaWI WCCGGW 1 cut(s) 780
BsaXI ACNNNNNCTCC 2 cut(s) 623, 653
Bsc4I CCNNNNNNNGG 2 cut(s) 802, 1421
Bse1I ACTGG 1 cut(s) 15
Bse3DI GCAATG 1 cut(s) 1426
BseAI TCCGGA 1 cut(s) 780
BseBI CCWGG 5 cut(s) 209, 942, 951, 1112, 1416
BseDI CCNNGG 2 cut(s) 941, 1000
BseGI GGATG 2 cut(s) 10, 1525
BseLI CCNNNNNNNGG 2 cut(s) 802, 1421
BseMI GCAATG 1 cut(s) 1426
BseMII CTCAG 4 cut(s) 69, 618, 784, 1515
BseNI ACTGG 1 cut(s) 15
BseRI GAGGAG 3 cut(s) 644, 744, 1304
BseSI GKGCMC 2 cut(s) 910, 1145
BseXI GCAGC 4 cut(s) 25, 424, 1241, 1477
BseYI CCCAGC 1 cut(s) 1337
BsgI GTGCAG 1 cut(s) 182
Bsh1236I CGCG 1 cut(s) 421
BshFI GGCC 3 cut(s) 85, 635, 811
BsiHKAI GWGCWC 2 cut(s) 508, 910
BsiSI CCGG 2 cut(s) 272, 781
BslFI GGGAC 2 cut(s) 384, 1354
BslI CCNNNNNNNGG 2 cut(s) 802, 1421
BsmAI GTCTC 3 cut(s) 190, 829, 1104
BsmBI CGTCTC 2 cut(s) 190, 1104
BsmFI GGGAC 2 cut(s) 384, 1354
BsnI GGCC 3 cut(s) 85, 635, 811
Bsp1286I GDGCHC 4 cut(s) 106, 508, 910, 1145
Bsp13I TCCGGA 1 cut(s) 780
Bsp19I CCATGG 1 cut(s) 1000
Bsp68I TCGCGA 1 cut(s) 421
BspACI CCGC 1 cut(s) 968
BspANI GGCC 3 cut(s) 85, 635, 811
BspCNI CTCAG 4 cut(s) 70, 619, 783, 1514
BspEI TCCGGA 1 cut(s) 780
BspFNI CGCG 1 cut(s) 421
BspLI GGNNCC 2 cut(s) 490, 948
BspMAI CTGCAG 1 cut(s) 151
BspMI ACCTGC 2 cut(s) 43, 154
BspOI GCTAGC 1 cut(s) 1319
BspPI GGATC 5 cut(s) 118, 483, 496, 908, 1432
BspTI CTTAAG 1 cut(s) 608
BsrDI GCAATG 1 cut(s) 1426
BsrI ACTGG 1 cut(s) 15
BssECI CCNNGG 2 cut(s) 941, 1000
BssNAI GTATAC 2 cut(s) 128, 385
BssT1I CCWWGG 1 cut(s) 1000
Bst1107I GTATAC 2 cut(s) 128, 385
Bst2UI CCWGG 5 cut(s) 209, 942, 951, 1112, 1416
Bst4CI ACNGT 5 cut(s) 823, 1098, 1153, 1405, 1535
BstAFI CTTAAG 1 cut(s) 608
BstAPI GCANNNNNTGC 1 cut(s) 1490
BstBAI YACGTR 1 cut(s) 706
BstC8I GCNNGC 4 cut(s) 175, 767, 1313, 1317
BstDEI CTNAG 4 cut(s) 78, 627, 770, 1501
BstDSI CCRYGG 1 cut(s) 1000
BstF5I GGATG 2 cut(s) 10, 1525
BstFNI CGCG 1 cut(s) 421
BstMAI GTCTC 3 cut(s) 190, 829, 1104
BstMWI GCNNNNNNNGC 6 cut(s) 155, 566, 632, 965, 1490, 1496
BstNI CCWGG 5 cut(s) 209, 942, 951, 1112, 1416
BstNSI RCATGY 1 cut(s) 769
BstSCI CCNGG 6 cut(s) 207, 270, 940, 949, 1110, 1414
BstSFI CTRYAG 4 cut(s) 147, 1135, 1149, 1344
BstSLI GKGCMC 2 cut(s) 910, 1145
BstUI CGCG 1 cut(s) 421
BstV1I GCAGC 4 cut(s) 25, 424, 1241, 1477
BstX2I RGATCY 3 cut(s) 488, 877, 1424
BstXI CCANNNNNNTGG 1 cut(s) 215
BstYI RGATCY 3 cut(s) 488, 877, 1424
BstZ17I GTATAC 2 cut(s) 128, 385
BsuRI GGCC 3 cut(s) 85, 635, 811
BtgI CCRYGG 1 cut(s) 1000
BtgZI GCGATG 1 cut(s) 402
BtsCI GGATG 2 cut(s) 10, 1525
BtsIMutI CAGTG 3 cut(s) 22, 910, 1540
BtuMI TCGCGA 1 cut(s) 421
BveI ACCTGC 2 cut(s) 43, 154
Cac8I GCNNGC 4 cut(s) 175, 767, 1313, 1317
CaiI CAGNNNCTG 2 cut(s) 827, 1352
Cfr13I GGNCC 2 cut(s) 810, 1123
Csp6I GTAC 2 cut(s) 703, 1154
CviAII CATG 5 cut(s) 513, 637, 766, 992, 1001
CviQI GTAC 2 cut(s) 703, 1154
DdeI CTNAG 4 cut(s) 78, 627, 770, 1501
Eco130I CCWWGG 1 cut(s) 1000
Eco24I GRGCYC 1 cut(s) 106
Eco47I GGWCC 1 cut(s) 1123
Eco57I CTGAAG 1 cut(s) 1377
EcoO109I RGGNCCY 1 cut(s) 810
EcoRII CCWGG 5 cut(s) 207, 940, 949, 1110, 1414
EcoT14I CCWWGG 1 cut(s) 1000
EcoT22I ATGCAT 1 cut(s) 418
EcoT38I GRGCYC 1 cut(s) 106
ErhI CCWWGG 1 cut(s) 1000
Esp3I CGTCTC 2 cut(s) 190, 1104
FaeI CATG 5 cut(s) 516, 640, 769, 995, 1004
FalI AAGNNNNNCTT 4 cut(s) 114, 146, 1110, 1142
FaqI GGGAC 2 cut(s) 384, 1354
FatI CATG 5 cut(s) 512, 636, 765, 991, 1000
FauI CCCGC 1 cut(s) 961
FauNDI CATATG 2 cut(s) 49, 330
FbaI TGATCA 4 cut(s) 342, 457, 829, 1354
FblI GTMKAC 3 cut(s) 127, 384, 1131
Fnu4HI GCNGC 4 cut(s) 39, 438, 1230, 1491
FokI GGATG 2 cut(s) 17, 1532
FriOI GRGCYC 1 cut(s) 106
Fsp4HI GCNGC 4 cut(s) 39, 438, 1230, 1491
FspBI CTAG 1 cut(s) 1316
GluI GCNGC 4 cut(s) 39, 438, 1230, 1491
GsaI CCCAGC 1 cut(s) 1341
GsuI CTGGAG 2 cut(s) 297, 1485
HaeIII GGCC 3 cut(s) 85, 635, 811
HapII CCGG 2 cut(s) 272, 781
Hin1II CATG 5 cut(s) 516, 640, 769, 995, 1004
HinfI GANTC 8 cut(s) 325, 691, 777, 784, 1107, 1166, 1240, 1292
HpaII CCGG 2 cut(s) 272, 781
HphI GGTGA 3 cut(s) 18, 1235, 1271
Hpy166II GTNNAC 5 cut(s) 117, 128, 385, 908, 1132
Hpy188III TCNNGA 8 cut(s) 56, 420, 729, 781, 855, 898, 1070, 1464
Hpy8I GTNNAC 5 cut(s) 117, 128, 385, 908, 1132
Hpy99I CGWCG 1 cut(s) 1033
HpyAV CCTTC 4 cut(s) 427, 502, 605, 753
HpyCH4III ACNGT 5 cut(s) 823, 1098, 1153, 1405, 1535
HpyCH4IV ACGT 1 cut(s) 705
HpyCH4V TGCA 9 cut(s) 149, 163, 416, 440, 765, 816, 908, 959, 1229
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 566, 632, 965, 1490, 1496
HpyF3I CTNAG 4 cut(s) 78, 627, 770, 1501
HpySE526I ACGT 1 cut(s) 705
Hsp92II CATG 5 cut(s) 516, 640, 769, 995, 1004
Kpn2I TCCGGA 1 cut(s) 780
Ksp22I TGATCA 4 cut(s) 342, 457, 829, 1354
LmnI GCTCC 2 cut(s) 946, 1466
Lsp1109I GCAGC 4 cut(s) 25, 424, 1241, 1477
LweI GCATC 5 cut(s) 403, 425, 1192, 1216, 1486
MaeI CTAG 1 cut(s) 1316
MaeII ACGT 1 cut(s) 705
MaeIII GTNAC 1 cut(s) 17
MboII GAAGA 7 cut(s) 213, 347, 677, 902, 925, 1484, 1535
MflI RGATCY 3 cut(s) 488, 877, 1424
MhlI GDGCHC 4 cut(s) 106, 508, 910, 1145
MluCI AATT 6 cut(s) 255, 474, 734, 840, 1091, 1459
MlyI GAGTC 3 cut(s) 700, 1175, 1301
MmeI TCCRAC 1 cut(s) 1389
Mph1103I ATGCAT 1 cut(s) 418
MroI TCCGGA 1 cut(s) 780
MseI TTAA 6 cut(s) 132, 518, 609, 1022, 1055, 1172
MspCI CTTAAG 1 cut(s) 608
MspI CCGG 2 cut(s) 272, 781
MspR9I CCNGG 6 cut(s) 209, 272, 942, 951, 1112, 1416
MvaI CCWGG 5 cut(s) 209, 942, 951, 1112, 1416
MvnI CGCG 1 cut(s) 421
MwoI GCNNNNNNNGC 6 cut(s) 155, 566, 632, 965, 1490, 1496
NciI CCSGG 1 cut(s) 272
NcoI CCATGG 1 cut(s) 1000
NdeI CATATG 2 cut(s) 49, 330
NheI GCTAGC 1 cut(s) 1315
NlaIII CATG 5 cut(s) 516, 640, 769, 995, 1004
NlaIV GGNNCC 2 cut(s) 490, 948
NmuCI GTSAC 1 cut(s) 17
NruI TCGCGA 1 cut(s) 421
NsiI ATGCAT 1 cut(s) 418
NspI RCATGY 1 cut(s) 769
PaeI GCATGC 1 cut(s) 769
PfeI GAWTC 5 cut(s) 325, 777, 784, 1107, 1240
PflMI CCANNNNNTGG 1 cut(s) 1421
PkrI GCNGC 4 cut(s) 40, 439, 1231, 1492
PleI GAGTC 3 cut(s) 699, 1174, 1300
PpsI GAGTC 3 cut(s) 699, 1174, 1300
Ppu21I YACGTR 1 cut(s) 706
PsiI TTATAA 1 cut(s) 378
Psp6I CCWGG 5 cut(s) 207, 940, 949, 1110, 1414
PspFI CCCAGC 1 cut(s) 1337
PspGI CCWGG 5 cut(s) 207, 940, 949, 1110, 1414
PspN4I GGNNCC 2 cut(s) 490, 948
PspPI GGNCC 2 cut(s) 810, 1123
PstI CTGCAG 1 cut(s) 151
PstNI CAGNNNCTG 2 cut(s) 827, 1352
PsuI RGATCY 3 cut(s) 488, 877, 1424
RruI TCGCGA 1 cut(s) 421
RsaI GTAC 2 cut(s) 704, 1155
RsaNI GTAC 2 cut(s) 703, 1154
SaqAI TTAA 6 cut(s) 132, 518, 609, 1022, 1055, 1172
SatI GCNGC 4 cut(s) 39, 438, 1230, 1491
Sau96I GGNCC 2 cut(s) 810, 1123
SchI GAGTC 3 cut(s) 700, 1175, 1301
ScrFI CCNGG 6 cut(s) 209, 272, 942, 951, 1112, 1416
SduI GDGCHC 4 cut(s) 106, 508, 910, 1145
SfaNI GCATC 5 cut(s) 403, 425, 1192, 1216, 1486
SfcI CTRYAG 4 cut(s) 147, 1135, 1149, 1344
SinI GGWCC 1 cut(s) 1123
SmlI CTYRAG 3 cut(s) 54, 608, 727
SmoI CTYRAG 3 cut(s) 54, 608, 727
SphI GCATGC 1 cut(s) 769
Sse9I AATT 6 cut(s) 255, 474, 734, 840, 1091, 1459
SsiI CCGC 1 cut(s) 968
SspI AATATT 2 cut(s) 713, 1050
SspMI CTAG 1 cut(s) 1316
StyD4I CCNGG 6 cut(s) 207, 270, 940, 949, 1110, 1414
StyI CCWWGG 1 cut(s) 1000
TaaI ACNGT 5 cut(s) 823, 1098, 1153, 1405, 1535
TaiI ACGT 1 cut(s) 708
TaqI TCGA 2 cut(s) 757, 1071
TasI AATT 6 cut(s) 255, 474, 734, 840, 1091, 1459
TfiI GAWTC 5 cut(s) 325, 777, 784, 1107, 1240
Tru1I TTAA 6 cut(s) 132, 518, 609, 1022, 1055, 1172
Tru9I TTAA 6 cut(s) 132, 518, 609, 1022, 1055, 1172
TscAI CASTG 3 cut(s) 22, 910, 1540
TseFI GTSAC 1 cut(s) 17
TseI GCWGC 4 cut(s) 38, 437, 1229, 1490
Tsp45I GTSAC 1 cut(s) 17
TspDTI ATGAA 3 cut(s) 501, 539, 1536
TspGWI ACGGA 1 cut(s) 925
TspRI CASTG 3 cut(s) 22, 910, 1540
Van91I CCANNNNNTGG 1 cut(s) 1421
Vha464I CTTAAG 1 cut(s) 608
VneI GTGCAC 1 cut(s) 906
VpaK11BI GGWCC 1 cut(s) 1123
XapI RAATTY 3 cut(s) 734, 840, 1459
XceI RCATGY 1 cut(s) 769
XcmI CCANNNNNNNNNTGG 2 cut(s) 894, 998
XmiI GTMKAC 3 cut(s) 127, 384, 1131
XspI CTAG 1 cut(s) 1316
Zsp2I ATGCAT 1 cut(s) 418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.