Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003797

Physical Location & Seq

Genomic Coordinates Forward (+)

11760097 .. 11765732

Gene Structure 5636 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0135700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGAGGTTGATGAGAAACCAACTGAAGATTACAATGATATTGGAAGGCTAGAGAAACAGATTCAAGAACTGGTTGAGGCAATTGTTTTACCCATGACCCACAAGGAGCGTTTTCAGAAATTAGGGGTTCGCCCACCAAAGGGAGTGCTTTTGTATGGACCTCCTGGAACTGGTAAAACTTTAATGGCCCGGGCTTGTGCTGCACAAACGATTGCCACTTTTCTGAAACTTGCAGGCCCACAACTGGTTCAGATGTTCATTGGGGATGGAGCAAAACTTGTTCGCGATGCCTTTCAACTCGCAGAAGAGAAATCTCCTTGCATCATTTTCATAGATGAAATTGATGCAATTGGCACAAAGCGGTTTGATAGCAAAGTGAGTGGTGATAGGGAGGTGCAGCGTACAATGCTTGAATTGCTTAATCAACTTGATGGCTTTAGTAGCGATGACCGGATCAAGTCTGATGAAGTTACCTTTTCTCTTTGGTTTTACTCAGGCGACGCAGGGCATTGCATATATATAGGAGTGGTCTACTTGGTGATGATCACAACATCGCCCAATCTAGAGGTTCACGGGCTGGATGAGCTCCCGGAGCAGTGGCGGAGGTTCAAGCTGGCTTGGCTTTGTAAGGAGCTGGCGTCGCATAATTCCGGGGCTTTGATTCGGATTCTCAATGCCCAGAAGAAGTGGATGAGGCAAGAGGACGCCAAGAACTCTGGTATTGTTAACTATAGACTCCACAGAGGAGACATCACGCCTTCCTTGGTCTGGTTTGAAGTCAACTATGGCCTTCTTCTGCTCTTCAGGAAGATAGTGAAATTTATGAAGTTGATTGCTTCTTCTGGAAACTTTTCCTTTAGCTGCAGGTTTCCAAAGGCTTTCATGGCAACCAAAAGTACCTCCTCCTCAGTTTTTCCTTCTTCCTCTTCTTCATATCCACCTTGGACCTATGATGTCTTCCTCAGCTTCAGAGGTGAGGACACCAGTAAAAGCTTTACAGATCATCTATATTTTTCTTTGAAACGAGAAGGAATATCCACCTTTAGGGATGATGAACTTGAGAGAGGGAAACCAATTTCATCAGAACTCGTGCAAGCAATACAAGAATCAAGGTTTGCGCTTGTTATTTTCTCAAGAAACTATGCTTCTTCTAAGTGGTGCTTGGATGAACTCGCAGAGATTGTTGAGTGCATGAAAGAGATGGGACAGACGGTGCTTCCCATTTTCTATAATGTAGATCCATCAAATGTACGGAAACAAACGGGAAGCTTTGCAGAAGCCTTTGATGCACATGAAGAACACTTCAAGGATAACTTAGAAAAAGTGCAAAGGTGGAGAGCTGCTTTGACTGAAGTGGCCAATCTTTCCGGATTTCATCTCCAAGATGGAAAGGGATACTGCAAGCACAACCCCAGGGAAATGGTGAAGGTATGGGCTGAGAAAGAAAAGAGGAATCTGGACAGGATGGTGAAAAATCGAATTACATGCCCAACTGCAATTGATATAAAAGATCATGTTCTGGTCATGAAATTCATAGGTATGGATGTCAAGACCACGTTGGATTTCTTTGTACATTTAATTTTGGAACTTGGTCCGTACATTGAGGAGCTCACAAAAACAGGAGGTGCCATAAAGGAGTTTGTTAACCCAAAACACAAAGACACTAGTAAGACTTCATTCAAGCCCTCAACTCGGTCAGTGTATGATGCAAGACTACCCAAAAACATGGGAATATCAGAAATGCTCAAGCTTCAATCAAATTTTGTACTAGTGCTTTCACCTTTTGTTAAACTAGTCTGTAGCACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00562 ko01521 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230

Pfam Domains

Protein Families

DSPc

Protein Analysis

602

Amino Acids

68.52

Weight (kDa)

8.33

Isoelectric Point (pI)

34.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	49 - 159	2.4e-30	ATPase family associated with various cellular activities (AAA)
TIR	PF01582	317 - 462	6e-55	TIR domain
TIR_2	PF13676	319 - 439	2.5e-16	TIR domain
RIO1	PF01163	464 - 515	1.6e-13	RIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003797)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50090 AT3G50100 AT3G50100 AT5G67240 AT5G67240 AT5G67240 AT5G67240
fragaria_vesca	FvH4_1g16590 FvH4_1g16590 FvH4_4g28290
malus_domestica	MD02G1178000.v1.1 MD15G1287900.v1.1
prunus_persica	Prupe.6G230000_v2.0.a1
pyrus_communis	pycom02g14410 pycom15g25140
rosa_chinensis	RchiOBHm_Chr2g0106501
rosa_laevigata	RLG00000017507
rosa_roxburghii	Rroxscaffold_2G00137120 Rroxscaffold_3G00227560
rosa_rugosa	Rorug02G0135700 Rorug02G0135800 Rorug02G0135900 Rorug02G0136000 Rorug05G0123100 Rorug05G0252900 Rorug05G0347700
rosa_samantha	Rh2AG187300 Rh2BG198100 Rh2BG614000 Rh2CG192300 Rh2DG193400 Rh5BG226200
rosa_wichuraiana	Rw2G014600 Rw2G014620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	855
AccB1I	GGYRCC	1 cut(s)	1625
AccI	GTMKAC	1 cut(s)	531
AccII	CGCG	1 cut(s)	285
AccIII	TCCGGA	1 cut(s)	1367
AciI	CCGC	2 cut(s)	361, 601
AclWI	GGATC	2 cut(s)	461, 1232
AcoI	YGGCCR	1 cut(s)	1356
AcsI	RAATTY	3 cut(s)	818, 1529, 1759
AcuI	CTGAAG	4 cut(s)	45, 787, 952, 1371
AcyI	GRCGYC	2 cut(s)	638, 705
AfaI	GTAC	6 cut(s)	403, 898, 1251, 1572, 1598, 1767
AfiI	CCNNNNNNNGG	7 cut(s)	139, 140, 170, 244, 768, 1044, 1692
AgsI	TTSAA	9 cut(s)	65, 296, 413, 610, 776, 1021, 1306, 1681, 1754
AhlI	ACTAGT	3 cut(s)	1664, 1768, 1792
AjnI	CCWGG	2 cut(s)	163, 1412
Alw21I	GWGCWC	2 cut(s)	588, 1611
Alw26I	GTCTC	1 cut(s)	741
AlwI	GGATC	2 cut(s)	461, 1232
Ama87I	CYCGRG	1 cut(s)	189
Aor13HI	TCCGGA	1 cut(s)	1367
AoxI	GGCC	4 cut(s)	186, 235, 787, 1356
ApeKI	GCWGC	4 cut(s)	200, 397, 861, 1340
ApoI	RAATTY	3 cut(s)	818, 1529, 1759
Asp700I	GAANNNNTTC	1 cut(s)	850
AspLEI	GCGC	1 cut(s)	1120
AspS9I	GGNCC	5 cut(s)	158, 187, 236, 945, 1592
AsuC2I	CCSGG	4 cut(s)	190, 191, 590, 652
AsuHPI	GGTGA	6 cut(s)	395, 550, 986, 1435, 1480, 1770
AvaI	CYCGRG	1 cut(s)	189
AvaII	GGWCC	3 cut(s)	158, 945, 1592
BalI	TGGCCA	1 cut(s)	1358
BanI	GGYRCC	1 cut(s)	1625
BanII	GRGCYC	2 cut(s)	588, 1611
BauI	CACGAG	1 cut(s)	1088
BbsI	GAAGAC	1 cut(s)	949
Bbv12I	GWGCWC	2 cut(s)	588, 1611
BbvCI	CCTCAGC	1 cut(s)	962
BbvI	GCAGC	4 cut(s)	187, 409, 848, 1327
BccI	CCATC	6 cut(s)	260, 425, 1195, 1249, 1379, 1459
BcgI	CGANNNNNNTGC	2 cut(s)	1467, 1501
BciT130I	CCWGG	2 cut(s)	165, 1414
BciVI	GTATCC	1 cut(s)	1388
BclI	TGATCA	1 cut(s)	543
BcnI	CCSGG	4 cut(s)	190, 191, 590, 652
BcoDI	GTCTC	1 cut(s)	741
BcuI	ACTAGT	3 cut(s)	1664, 1768, 1792
BfaI	CTAG	5 cut(s)	50, 563, 1665, 1769, 1793
BfmI	CTRYAG	3 cut(s)	730, 862, 1798
BfuAI	ACCTGC	1 cut(s)	855
BfuI	GTATCC	1 cut(s)	1388
BisI	GCNGC	4 cut(s)	201, 398, 862, 1341
BlsI	GCNGC	4 cut(s)	202, 399, 863, 1342
Bme1390I	CCNGG	6 cut(s)	165, 190, 191, 590, 652, 1414
Bme18I	GGWCC	3 cut(s)	158, 945, 1592
BmeT110I	CYCGRG	1 cut(s)	189
BmgT120I	GGNCC	5 cut(s)	158, 187, 236, 945, 1592
BmiI	GGNNCC	1 cut(s)	1627
BmrFI	CCNGG	6 cut(s)	165, 190, 191, 590, 652, 1414
BmsI	GCATC	5 cut(s)	277, 330, 334, 1276, 1696
BpiI	GAAGAC	1 cut(s)	949
Bpu10I	CCTNAGC	1 cut(s)	962
BpuEI	CTTGAG	3 cut(s)	1079, 1117, 1730
BpuMI	CCSGG	4 cut(s)	190, 191, 590, 652
BsaHI	GRCGYC	2 cut(s)	638, 705
BsaJI	CCNNGG	6 cut(s)	189, 651, 762, 941, 1412, 1413
BsaWI	WCCGGW	2 cut(s)	450, 1367
BsaXI	ACNNNNNCTCC	2 cut(s)	623, 653
Bsc4I	CCNNNNNNNGG	7 cut(s)	139, 140, 170, 244, 768, 1044, 1692
Bse1I	ACTGG	4 cut(s)	75, 175, 249, 984
Bse3DI	GCAATG	1 cut(s)	508
BseAI	TCCGGA	1 cut(s)	1367
BseBI	CCWGG	2 cut(s)	165, 1414
BseDI	CCNNGG	6 cut(s)	189, 651, 762, 941, 1412, 1413
BseGI	GGATG	7 cut(s)	271, 586, 696, 1054, 1171, 1470, 1549
BseLI	CCNNNNNNNGG	7 cut(s)	139, 140, 170, 244, 768, 1044, 1692
BseMI	GCAATG	1 cut(s)	508
BseMII	CTCAG	4 cut(s)	507, 921, 976, 1428
BseNI	ACTGG	4 cut(s)	75, 175, 249, 984
BseRI	GAGGAG	4 cut(s)	759, 892, 895, 1619
BseXI	GCAGC	4 cut(s)	187, 409, 848, 1327
BsgI	GTGCAG	2 cut(s)	186, 416
Bsh1236I	CGCG	1 cut(s)	285
BshFI	GGCC	4 cut(s)	188, 237, 789, 1358
BshNI	GGYRCC	1 cut(s)	1625
BsiHKAI	GWGCWC	2 cut(s)	588, 1611
BsiHKCI	CYCGRG	1 cut(s)	189
BsiSI	CCGG	5 cut(s)	190, 451, 590, 651, 1368
BslFI	GGGAC	1 cut(s)	1218
BslI	CCNNNNNNNGG	7 cut(s)	139, 140, 170, 244, 768, 1044, 1692
BsmAI	GTCTC	1 cut(s)	741
BsmFI	GGGAC	1 cut(s)	1218
BsnI	GGCC	4 cut(s)	188, 237, 789, 1358
BsoBI	CYCGRG	1 cut(s)	189
Bsp1286I	GDGCHC	2 cut(s)	588, 1611
Bsp13I	TCCGGA	1 cut(s)	1367
Bsp1407I	TGTACA	1 cut(s)	1570
Bsp143I	GATC	5 cut(s)	453, 543, 1000, 1237, 1510
Bsp68I	TCGCGA	1 cut(s)	285
BspACI	CCGC	2 cut(s)	361, 601
BspANI	GGCC	4 cut(s)	188, 237, 789, 1358
BspCNI	CTCAG	4 cut(s)	506, 920, 975, 1429
BspEI	TCCGGA	1 cut(s)	1367
BspFNI	CGCG	1 cut(s)	285
BspHI	TCATGA	1 cut(s)	1524
BspLI	GGNNCC	1 cut(s)	1627
BspMAI	CTGCAG	1 cut(s)	866
BspMI	ACCTGC	1 cut(s)	855
BspPI	GGATC	2 cut(s)	461, 1232
BspQI	GCTCTTC	1 cut(s)	806
BspT107I	GGYRCC	1 cut(s)	1625
BsrDI	GCAATG	1 cut(s)	508
BsrGI	TGTACA	1 cut(s)	1570
BsrI	ACTGG	4 cut(s)	75, 175, 249, 984
BssECI	CCNNGG	6 cut(s)	189, 651, 762, 941, 1412, 1413
BssMI	GATC	5 cut(s)	453, 543, 1000, 1237, 1510
BssNI	GRCGYC	2 cut(s)	638, 705
BssSI	CACGAG	1 cut(s)	1088
BssT1I	CCWWGG	2 cut(s)	762, 941
Bst2BI	CACGAG	1 cut(s)	1088
Bst2UI	CCWGG	2 cut(s)	165, 1414
Bst4CI	ACNGT	1 cut(s)	1213
Bst6I	CTCTTC	3 cut(s)	300, 806, 931
BstACI	GRCGYC	2 cut(s)	638, 705
BstAUI	TGTACA	1 cut(s)	1570
BstC8I	GCNNGC	5 cut(s)	235, 615, 636, 1095, 1403
BstDEI	CTNAG	6 cut(s)	493, 907, 962, 1152, 1315, 1437
BstF5I	GGATG	7 cut(s)	271, 586, 696, 1054, 1171, 1470, 1549
BstFNI	CGCG	1 cut(s)	285
BstHHI	GCGC	1 cut(s)	1120
BstKTI	GATC	5 cut(s)	456, 546, 1003, 1240, 1513
BstMAI	GTCTC	1 cut(s)	741
BstMBI	GATC	5 cut(s)	453, 543, 1000, 1237, 1510
BstNI	CCWGG	2 cut(s)	165, 1414
BstNSI	RCATGY	1 cut(s)	1488
BstSCI	CCNGG	6 cut(s)	163, 188, 189, 588, 650, 1412
BstSFI	CTRYAG	3 cut(s)	730, 862, 1798
BstUI	CGCG	1 cut(s)	285
BstV1I	GCAGC	4 cut(s)	187, 409, 848, 1327
BstV2I	GAAGAC	1 cut(s)	949
BstX2I	RGATCY	1 cut(s)	1237
BstXI	CCANNNNNNTGG	2 cut(s)	1420, 1726
BstYI	RGATCY	1 cut(s)	1237
BsuI	GTATCC	1 cut(s)	1388
BsuRI	GGCC	4 cut(s)	188, 237, 789, 1358
BtgZI	GCGATG	3 cut(s)	300, 459, 537
BtsCI	GGATG	7 cut(s)	271, 586, 696, 1054, 1171, 1470, 1549
BtsI	GCAGTG	1 cut(s)	602
BtsIMutI	CAGTG	2 cut(s)	602, 1704
BtuMI	TCGCGA	1 cut(s)	285
BveI	ACCTGC	1 cut(s)	855
Cac8I	GCNNGC	5 cut(s)	235, 615, 636, 1095, 1403
CciI	TCATGA	1 cut(s)	1524
CfoI	GCGC	1 cut(s)	1120
Cfr13I	GGNCC	5 cut(s)	158, 187, 236, 945, 1592
Cfr9I	CCCGGG	1 cut(s)	189
CseI	GACGC	3 cut(s)	509, 627, 713
Csp6I	GTAC	6 cut(s)	402, 897, 1250, 1571, 1597, 1766
CspCI	CAANNNNNGTGG	2 cut(s)	361, 396
CviAII	CATG	8 cut(s)	94, 883, 1192, 1292, 1485, 1514, 1525, 1726
CviQI	GTAC	6 cut(s)	402, 897, 1250, 1571, 1597, 1766
DdeI	CTNAG	6 cut(s)	493, 907, 962, 1152, 1315, 1437
DpnI	GATC	5 cut(s)	455, 545, 1002, 1239, 1512
DpnII	GATC	5 cut(s)	453, 543, 1000, 1237, 1510
EaeI	YGGCCR	1 cut(s)	1356
Eam1104I	CTCTTC	3 cut(s)	300, 806, 931
EarI	CTCTTC	3 cut(s)	300, 806, 931
EciI	GGCGGA	1 cut(s)	616
Ecl136II	GAGCTC	2 cut(s)	586, 1609
Eco130I	CCWWGG	2 cut(s)	762, 941
Eco24I	GRGCYC	2 cut(s)	588, 1611
Eco47I	GGWCC	3 cut(s)	158, 945, 1592
Eco53kI	GAGCTC	2 cut(s)	586, 1609
Eco57I	CTGAAG	4 cut(s)	45, 787, 952, 1371
Eco88I	CYCGRG	1 cut(s)	189
EcoICRI	GAGCTC	2 cut(s)	586, 1609
EcoRII	CCWGG	2 cut(s)	163, 1412
EcoT14I	CCWWGG	2 cut(s)	762, 941
EcoT38I	GRGCYC	2 cut(s)	588, 1611
ErhI	CCWWGG	2 cut(s)	762, 941
FaeI	CATG	8 cut(s)	97, 886, 1195, 1295, 1488, 1517, 1528, 1729
FalI	AAGNNNNNCTT	4 cut(s)	1145, 1177, 1298, 1330
FaqI	GGGAC	1 cut(s)	1218
FatI	CATG	8 cut(s)	93, 882, 1191, 1291, 1484, 1513, 1524, 1725
FbaI	TGATCA	1 cut(s)	543
FblI	GTMKAC	1 cut(s)	531
Fnu4HI	GCNGC	4 cut(s)	201, 398, 862, 1341
FokI	GGATG	7 cut(s)	278, 593, 703, 1061, 1178, 1477, 1556
FriOI	GRGCYC	2 cut(s)	588, 1611
Fsp4HI	GCNGC	4 cut(s)	201, 398, 862, 1341
FspBI	CTAG	5 cut(s)	50, 563, 1665, 1769, 1793
GlaI	GCGC	1 cut(s)	1119
GluI	GCNGC	4 cut(s)	201, 398, 862, 1341
HaeIII	GGCC	4 cut(s)	188, 237, 789, 1358
HapII	CCGG	5 cut(s)	190, 451, 590, 651, 1368
HgaI	GACGC	3 cut(s)	509, 627, 713
HhaI	GCGC	1 cut(s)	1120
Hin1I	GRCGYC	2 cut(s)	638, 705
Hin1II	CATG	8 cut(s)	97, 886, 1195, 1295, 1488, 1517, 1528, 1729
Hin6I	GCGC	1 cut(s)	1118
HinP1I	GCGC	1 cut(s)	1118
HincII	GTYRAC	3 cut(s)	727, 781, 1645
HindII	GTYRAC	3 cut(s)	727, 781, 1645
HindIII	AAGCTT	3 cut(s)	991, 1267, 1748
HinfI	GANTC	6 cut(s)	61, 661, 667, 735, 1106, 1453
HpaI	GTTAAC	2 cut(s)	727, 1645
HpaII	CCGG	5 cut(s)	190, 451, 590, 651, 1368
HphI	GGTGA	6 cut(s)	395, 550, 986, 1435, 1480, 1770
Hpy166II	GTNNAC	5 cut(s)	532, 571, 727, 781, 1645
Hpy188I	TCNGA	8 cut(s)	117, 225, 252, 463, 666, 971, 1084, 1738
Hpy8I	GTNNAC	5 cut(s)	532, 571, 727, 781, 1645
Hpy99I	CGWCG	2 cut(s)	503, 643
HpyAV	CCTTC	6 cut(s)	39, 768, 800, 927, 1022, 1420
HpyCH4III	ACNGT	1 cut(s)	1213
HpyCH4IV	ACGT	1 cut(s)	1556
HpyF3I	CTNAG	6 cut(s)	493, 907, 962, 1152, 1315, 1437
HpySE526I	ACGT	1 cut(s)	1556
Hsp92I	GRCGYC	2 cut(s)	638, 705
Hsp92II	CATG	8 cut(s)	97, 886, 1195, 1295, 1488, 1517, 1528, 1729
HspAI	GCGC	1 cut(s)	1118
Kpn2I	TCCGGA	1 cut(s)	1367
Ksp22I	TGATCA	1 cut(s)	543
KspAI	GTTAAC	2 cut(s)	727, 1645
Kzo9I	GATC	5 cut(s)	453, 543, 1000, 1237, 1510
LguI	GCTCTTC	1 cut(s)	806
LmnI	GCTCC	6 cut(s)	106, 269, 591, 592, 631, 1606
Lsp1109I	GCAGC	4 cut(s)	187, 409, 848, 1327
LweI	GCATC	5 cut(s)	277, 330, 334, 1276, 1696
MaeI	CTAG	5 cut(s)	50, 563, 1665, 1769, 1793
MaeII	ACGT	1 cut(s)	1556
MaeIII	GTNAC	1 cut(s)	469
MalI	GATC	5 cut(s)	455, 545, 1002, 1239, 1512
MboI	GATC	5 cut(s)	453, 543, 1000, 1237, 1510
MfeI	CAATTG	3 cut(s)	81, 348, 1497
MflI	RGATCY	1 cut(s)	1237
MhlI	GDGCHC	2 cut(s)	588, 1611
MlsI	TGGCCA	1 cut(s)	1358
MluNI	TGGCCA	1 cut(s)	1358
MlyI	GAGTC	1 cut(s)	729
MmeI	TCCRAC	1 cut(s)	1539
Mox20I	TGGCCA	1 cut(s)	1358
MroI	TCCGGA	1 cut(s)	1367
MroXI	GAANNNNTTC	1 cut(s)	850
MscI	TGGCCA	1 cut(s)	1358
MseI	TTAA	7 cut(s)	182, 420, 726, 1577, 1644, 1788, 1807
MslI	CAYNNNNRTG	1 cut(s)	1538
Msp20I	TGGCCA	1 cut(s)	1358
MspI	CCGG	5 cut(s)	190, 451, 590, 651, 1368
MspR9I	CCNGG	6 cut(s)	165, 190, 191, 590, 652, 1414
MunI	CAATTG	3 cut(s)	81, 348, 1497
MvaI	CCWGG	2 cut(s)	165, 1414
MvnI	CGCG	1 cut(s)	285
NciI	CCSGG	4 cut(s)	190, 191, 590, 652
NdeII	GATC	5 cut(s)	453, 543, 1000, 1237, 1510
NlaIII	CATG	8 cut(s)	97, 886, 1195, 1295, 1488, 1517, 1528, 1729
NlaIV	GGNNCC	1 cut(s)	1627
NruI	TCGCGA	1 cut(s)	285
NspI	RCATGY	1 cut(s)	1488
PagI	TCATGA	1 cut(s)	1524
PasI	CCCWGGG	1 cut(s)	1413
PciSI	GCTCTTC	1 cut(s)	806
PdmI	GAANNNNTTC	1 cut(s)	850
PfeI	GAWTC	5 cut(s)	61, 661, 667, 1106, 1453
PfoI	TCCNGGA	2 cut(s)	163, 588
PkrI	GCNGC	4 cut(s)	202, 399, 863, 1342
PleI	GAGTC	1 cut(s)	729
PpsI	GAGTC	1 cut(s)	729
Psp124BI	GAGCTC	2 cut(s)	588, 1611
Psp6I	CCWGG	2 cut(s)	163, 1412
PspGI	CCWGG	2 cut(s)	163, 1412
PspN4I	GGNNCC	1 cut(s)	1627
PspPI	GGNCC	5 cut(s)	158, 187, 236, 945, 1592
PstI	CTGCAG	1 cut(s)	866
PsuI	RGATCY	1 cut(s)	1237
RruI	TCGCGA	1 cut(s)	285
RsaI	GTAC	6 cut(s)	403, 898, 1251, 1572, 1598, 1767
RsaNI	GTAC	6 cut(s)	402, 897, 1250, 1571, 1597, 1766
RseI	CAYNNNNRTG	1 cut(s)	1538
SacI	GAGCTC	2 cut(s)	588, 1611
SapI	GCTCTTC	1 cut(s)	806
SaqAI	TTAA	7 cut(s)	182, 420, 726, 1577, 1644, 1788, 1807
SatI	GCNGC	4 cut(s)	201, 398, 862, 1341
Sau3AI	GATC	5 cut(s)	453, 543, 1000, 1237, 1510
Sau96I	GGNCC	5 cut(s)	158, 187, 236, 945, 1592
SchI	GAGTC	1 cut(s)	729
ScrFI	CCNGG	6 cut(s)	165, 190, 191, 590, 652, 1414
SduI	GDGCHC	2 cut(s)	588, 1611
SfaNI	GCATC	5 cut(s)	277, 330, 334, 1276, 1696
SfcI	CTRYAG	3 cut(s)	730, 862, 1798
SinI	GGWCC	3 cut(s)	158, 945, 1592
SmaI	CCCGGG	1 cut(s)	191
SmiMI	CAYNNNNRTG	1 cut(s)	1538
SmlI	CTYRAG	3 cut(s)	1058, 1132, 1745
SmoI	CTYRAG	3 cut(s)	1058, 1132, 1745
SpeI	ACTAGT	3 cut(s)	1664, 1768, 1792
SrfI	GCCCGGGC	1 cut(s)	191
SsiI	CCGC	2 cut(s)	361, 601
SspMI	CTAG	5 cut(s)	50, 563, 1665, 1769, 1793
SstI	GAGCTC	2 cut(s)	588, 1611
StyD4I	CCNGG	6 cut(s)	163, 188, 189, 588, 650, 1412
StyI	CCWWGG	2 cut(s)	762, 941
TaaI	ACNGT	1 cut(s)	1213
TaiI	ACGT	1 cut(s)	1559
TaqI	TCGA	1 cut(s)	1477
TaqII	GACCGA	1 cut(s)	1683
TatI	WGTACW	2 cut(s)	1570, 1765
TfiI	GAWTC	5 cut(s)	61, 661, 667, 1106, 1453
Tru1I	TTAA	7 cut(s)	182, 420, 726, 1577, 1644, 1788, 1807
Tru9I	TTAA	7 cut(s)	182, 420, 726, 1577, 1644, 1788, 1807
TscAI	CASTG	2 cut(s)	602, 1704
TseI	GCWGC	4 cut(s)	200, 397, 861, 1340
TspGWI	ACGGA	2 cut(s)	1267, 1584
TspMI	CCCGGG	1 cut(s)	189
TspRI	CASTG	2 cut(s)	602, 1704
VpaK11BI	GGWCC	3 cut(s)	158, 945, 1592
XapI	RAATTY	3 cut(s)	818, 1529, 1759
XbaI	TCTAGA	1 cut(s)	562
XceI	RCATGY	1 cut(s)	1488
XmaI	CCCGGG	1 cut(s)	189
XmiI	GTMKAC	1 cut(s)	531
XmnI	GAANNNNTTC	1 cut(s)	850
XspI	CTAG	5 cut(s)	50, 563, 1665, 1769, 1793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.