Small RNA degrading nuclease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50090 AT3G50100 AT3G50100 AT5G67240 AT5G67240 AT5G67240 AT5G67240 |
| fragaria_vesca | FvH4_1g16590 FvH4_1g16590 FvH4_4g28290 |
| malus_domestica | MD02G1178000.v1.1 MD15G1287900.v1.1 |
| prunus_persica | Prupe.6G230000_v2.0.a1 |
| pyrus_communis | pycom02g14410 pycom15g25140 |
| rosa_chinensis | RchiOBHm_Chr2g0106501 |
| rosa_laevigata | RLG00000017507 |
| rosa_roxburghii | Rroxscaffold_2G00137120 Rroxscaffold_3G00227560 |
| rosa_rugosa | Rorug02G0135700 Rorug02G0135800 Rorug02G0135900 Rorug02G0136000 Rorug05G0123100 Rorug05G0252900 Rorug05G0347700 |
| rosa_samantha | Rh2AG187300 Rh2BG198100 Rh2BG614000 Rh2CG192300 Rh2DG193400 Rh5BG226200 |
| rosa_wichuraiana | Rw2G014600 Rw2G014620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 123 |
| AciI | CCGC | 1 cut(s) | 159 |
| AfaI | GTAC | 1 cut(s) | 34 |
| AflIII | ACRYGT | 1 cut(s) | 29 |
| AgsI | TTSAA | 3 cut(s) | 61, 106, 127 |
| AluBI | AGCT | 1 cut(s) | 41 |
| AluI | AGCT | 1 cut(s) | 41 |
| AoxI | GGCC | 1 cut(s) | 185 |
| ApeKI | GCWGC | 1 cut(s) | 8 |
| AseI | ATTAAT | 1 cut(s) | 143 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 56 |
| AspS9I | GGNCC | 1 cut(s) | 185 |
| AsuHPI | GGTGA | 1 cut(s) | 160 |
| BccI | CCATC | 2 cut(s) | 71, 176 |
| BfaI | CTAG | 1 cut(s) | 195 |
| BfmI | CTRYAG | 2 cut(s) | 9, 116 |
| BfuAI | ACCTGC | 1 cut(s) | 123 |
| BisI | GCNGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 1 cut(s) | 10 |
| BmgT120I | GGNCC | 1 cut(s) | 185 |
| BseGI | GGATG | 1 cut(s) | 187 |
| BshFI | GGCC | 1 cut(s) | 187 |
| BsnI | GGCC | 1 cut(s) | 187 |
| BspACI | CCGC | 1 cut(s) | 159 |
| BspANI | GGCC | 1 cut(s) | 187 |
| BspMAI | CTGCAG | 2 cut(s) | 13, 120 |
| BspMI | ACCTGC | 1 cut(s) | 123 |
| Bst4CI | ACNGT | 1 cut(s) | 101 |
| BstC8I | GCNNGC | 1 cut(s) | 120 |
| BstF5I | GGATG | 1 cut(s) | 187 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 17 |
| BstNSI | RCATGY | 1 cut(s) | 33 |
| BstSFI | CTRYAG | 2 cut(s) | 9, 116 |
| BsuRI | GGCC | 1 cut(s) | 187 |
| BtsCI | GGATG | 1 cut(s) | 187 |
| BveI | ACCTGC | 1 cut(s) | 123 |
| Cac8I | GCNNGC | 1 cut(s) | 120 |
| Cfr13I | GGNCC | 1 cut(s) | 185 |
| Csp6I | GTAC | 1 cut(s) | 33 |
| CviAII | CATG | 1 cut(s) | 30 |
| CviJI | RGCY | 3 cut(s) | 20, 41, 187 |
| CviKI_1 | RGCY | 3 cut(s) | 20, 41, 187 |
| CviQI | GTAC | 1 cut(s) | 33 |
| FaeI | CATG | 1 cut(s) | 33 |
| FaiI | YATR | 7 cut(s) | 6, 31, 47, 138, 140, 163, 165 |
| FatI | CATG | 1 cut(s) | 29 |
| FauNDI | CATATG | 1 cut(s) | 163 |
| Fnu4HI | GCNGC | 1 cut(s) | 9 |
| FokI | GGATG | 1 cut(s) | 194 |
| Fsp4HI | GCNGC | 1 cut(s) | 9 |
| FspBI | CTAG | 1 cut(s) | 195 |
| GluI | GCNGC | 1 cut(s) | 9 |
| HaeIII | GGCC | 1 cut(s) | 187 |
| Hin1II | CATG | 1 cut(s) | 33 |
| HphI | GGTGA | 1 cut(s) | 160 |
| Hpy188I | TCNGA | 1 cut(s) | 76 |
| Hpy188III | TCNNGA | 2 cut(s) | 61, 195 |
| HpyAV | CCTTC | 1 cut(s) | 67 |
| HpyCH4III | ACNGT | 1 cut(s) | 101 |
| HpyCH4V | TGCA | 2 cut(s) | 11, 118 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 17 |
| Hsp92II | CATG | 1 cut(s) | 33 |
| LpnPI | CCDG | 3 cut(s) | 6, 104, 128 |
| MaeI | CTAG | 1 cut(s) | 195 |
| MaeIII | GTNAC | 1 cut(s) | 25 |
| MboII | GAAGA | 1 cut(s) | 139 |
| MmeI | TCCRAC | 1 cut(s) | 73 |
| MroXI | GAANNNNTTC | 1 cut(s) | 56 |
| MseI | TTAA | 1 cut(s) | 143 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 17 |
| NdeI | CATATG | 1 cut(s) | 163 |
| NlaIII | CATG | 1 cut(s) | 33 |
| NspI | RCATGY | 1 cut(s) | 33 |
| PciI | ACATGT | 1 cut(s) | 29 |
| PdmI | GAANNNNTTC | 1 cut(s) | 56 |
| PkrI | GCNGC | 1 cut(s) | 10 |
| PscI | ACATGT | 1 cut(s) | 29 |
| PshBI | ATTAAT | 1 cut(s) | 143 |
| PspPI | GGNCC | 1 cut(s) | 185 |
| PstI | CTGCAG | 2 cut(s) | 13, 120 |
| RsaI | GTAC | 1 cut(s) | 34 |
| RsaNI | GTAC | 1 cut(s) | 33 |
| SaqAI | TTAA | 1 cut(s) | 143 |
| SatI | GCNGC | 1 cut(s) | 9 |
| Sau96I | GGNCC | 1 cut(s) | 185 |
| SbfI | CCTGCAGG | 1 cut(s) | 120 |
| SdaI | CCTGCAGG | 1 cut(s) | 120 |
| SetI | ASST | 3 cut(s) | 43, 117, 204 |
| SfcI | CTRYAG | 2 cut(s) | 9, 116 |
| SgeI | CNNG | 5 cut(s) | 33, 42, 73, 127, 131 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 120 |
| SsiI | CCGC | 1 cut(s) | 159 |
| SspMI | CTAG | 1 cut(s) | 195 |
| TaaI | ACNGT | 1 cut(s) | 101 |
| TatI | WGTACW | 1 cut(s) | 32 |
| Tru1I | TTAA | 1 cut(s) | 143 |
| Tru9I | TTAA | 1 cut(s) | 143 |
| TseI | GCWGC | 1 cut(s) | 8 |
| VspI | ATTAAT | 1 cut(s) | 143 |
| XbaI | TCTAGA | 1 cut(s) | 194 |
| XceI | RCATGY | 1 cut(s) | 33 |
| XmnI | GAANNNNTTC | 1 cut(s) | 56 |
| XspI | CTAG | 1 cut(s) | 195 |