Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003797

Physical Location & Seq

Genomic Coordinates Reverse (-)

27798290 .. 27802060

Gene Structure 3771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0252900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGTTTTCTGCTCCATTAGACACTATAAGTGCTACCGAGTCACTTAAAGATGGCAAGACCATAGTTTCAGCAGGTGGGAGCTTTGAGCTAGGATTCTTTACCCCCCAAAATTCCAGTAATTGGTACTTGGGAATATGGTACAAGAAGATAGCTGCTAGGACTGTGGTGTGGGTTGCAAACAGAGATAGCCCATTTAATGGTTCGGCTGGAGTTTTGAAGTTTTCTGACCACAGAGTTCTTGTACTTATAAATGATGCCAACACCACAATTTGGTCTGCCAATTCCTCTAAATCAGCAACCACCCCAGTTGCACAACTTTTGGACACAGGTAATCTAGTTGTGACAGATCACAATGACCCGGAAACTTTCCTGTGGCAGAGTTTTGATTATCCATGCAATACAATTCTGCCTGGCATGAAATATGGAGTAAACTTGGTAACAGGCCTGAACCGGTTCCTGACGTCATGGAAGAGTGATCAGGATCCTTCCAGAGGGGCTTATACGAATCAGCTTGACACAACTGGGTTACCGCAATTTTTACTAAAGAAAGGTTCTGTAGTGCAGTTCAGGTCTGGACCTTGGAATGGTCTCAGGTTTACTGGAATGCCTAATTTGAAACCAAATCCCATATATACCTATGAGTTTGTATATAATGAGGAGGAAATATATTACCATTACCAACTCATTAACAGCTCAGTTTCTACAAGGTTAACACTAAACCCCAATGGAAACCTCCAGCGTTTCACATGGATTGACAGAATTCAAGATTGGAGCCTTTACTTGACTGCACAAATAGATGATTGTGACAGGTATGCAATATGTGGTGCATATGGAAGCTGCAACATTAACAACTCCCCTTCTTGTGGATGCTTAAAAGGTTTTGCTCCGAAATCCCCCCAAGACTGGGAGATGGCAGATTGGTCACATGGCTGTGTACGAAACACTCCACTGGATTGCCACGATGGAGAGGGTTTTCTACAATATTCTGGCATTAAATTGCCAGATACACAGCATTCCTGGTATAACAAGACAATGAACCTCAAAGAATGTGAACAGGTTTGCTTGAAGAACTGCAATTGCACAGCTTATGCTAATTTGGATATTAGAGGAGAAGGAAGTGGGTGCATACTCTGGCTTGGAGAACTGATTGATACTCGAGAATTCTCTGATGCCGGGCAGGACATATATATAAGGATGGCTGCCTCTGAGCTAGTGACATACAGACGCTTGAAGGGAAAAACAAAAGTTAAGGTCATAGTTCTATCTTTACTAGCTGTGGGGATAACTCTTCTAGGCCTATGCTTGATACTACATTTATACAAGAGGAAGAAGAAGAAGGAAAAAAAGCAGATTAAGAGAAAAGGAAATATGTTGCATACTCCAGAGCAAGACAGCAATGACCAATGCCATGATCTAGAGCTACCATTATTTGATTTTAGTACTATAGCAGATGCCACCAATAATTTTTCTGTTGCTAACAAGCTTGGAAAGGGCGGTTTTGGTCCAGTTTATAAGGGAAAACTGATGGAAGGGCAAGAAATAGGGGTGAAAAGGCTTTCAAGAAGTTCGAGACAAGGAATCAAAGAGTTCAAGAATGAAGTATTATGCATTTCCAAGCTACAGCACCGCAACCTTGTGAAGCTTCTGGGATGTTGCACTGAAGGTCAAGAAAGGTTGTTGATATATGAATACATGCCCAACAAGAGCTTAGACTTCTTCATATTTGATGAACAGCAAAGTATAATTCTGGATTGGCCTAAGCGTTTCCACATTATCAATGGGATAGCTAGAGGGCTACTTTATCTTCATCAAGATTCCAGACTGAGGATAATCCATCGTGATCTAAAAGCTAGCAATGTCTTACTAGACTATGAACTGAATCCAAAAATTTCAGATTTTGGCATTGCTAGGAGTTTTGGAGGAGAAGAAACTGAAGCAAATACGAAGAGAGTGGTTGGAACATACGGTTACATGTCTCCGGAATATGCAATTGATGGTGTCTTCTCGGTGAAATCTGATGTTTTTAGCTTTGGTGTTTTGGTACTTGAGATAGTGAGTGGAAAGAAGAACAGAGGATTTTCTCACCCAGACCACAAGCTTAACCTTCTTGGACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006401 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009987 GO:0010586 GO:0010587 GO:0016070 GO:0016592 GO:0016787 GO:0016788 GO:0019439 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046700 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RNase_T RRM_1

Protein Analysis

705

Amino Acids

79.47

Weight (kDa)

8.45

Isoelectric Point (pI)

36.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	54 - 157	1.4e-37	D-mannose binding lectin
S_locus_glycop	PF00954	189 - 298	7.4e-35	S-locus glycoprotein domain
PAN_2	PF08276	319 - 385	1.4e-22	PAN-like domain
Pkinase	PF00069	490 - 689	1.4e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	491 - 688	1.8e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003797)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50090 AT3G50100 AT3G50100 AT5G67240 AT5G67240 AT5G67240 AT5G67240
fragaria_vesca	FvH4_1g16590 FvH4_1g16590 FvH4_4g28290
malus_domestica	MD02G1178000.v1.1 MD15G1287900.v1.1
prunus_persica	Prupe.6G230000_v2.0.a1
pyrus_communis	pycom02g14410 pycom15g25140
rosa_chinensis	RchiOBHm_Chr2g0106501
rosa_laevigata	RLG00000017507
rosa_roxburghii	Rroxscaffold_2G00137120 Rroxscaffold_3G00227560
rosa_rugosa	Rorug02G0135700 Rorug02G0135800 Rorug02G0135900 Rorug02G0136000 Rorug05G0123100 Rorug05G0252900 Rorug05G0347700
rosa_samantha	Rh2AG187300 Rh2BG198100 Rh2BG614000 Rh2CG192300 Rh2DG193400 Rh5BG226200
rosa_wichuraiana	Rw2G014600 Rw2G014620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	248, 1512
AarI	CACCTGC	1 cut(s)	62
AatII	GACGTC	1 cut(s)	464
Acc36I	ACCTGC	1 cut(s)	62
AccB7I	CCANNNNNTGG	3 cut(s)	120, 197, 270
AccIII	TCCGGA	1 cut(s)	1978
AciI	CCGC	3 cut(s)	530, 1494, 1627
AclWI	GGATC	2 cut(s)	476, 489
AcsI	RAATTY	4 cut(s)	109, 759, 1160, 1887
AcuI	CTGAAG	2 cut(s)	1680, 1953
AcyI	GRCGYC	1 cut(s)	461
AfaI	GTAC	6 cut(s)	125, 140, 243, 936, 1441, 2043
AfiI	CCNNNNNNNGG	9 cut(s)	120, 197, 270, 491, 584, 863, 903, 904, 1824
AflIII	ACRYGT	1 cut(s)	1971
AgeI	ACCGGT	1 cut(s)	450
AgsI	TTSAA	7 cut(s)	217, 616, 764, 1066, 1231, 1560, 1591
AjnI	CCWGG	2 cut(s)	409, 1016
AjuI	GAANNNNNNNTTGG	2 cut(s)	751, 783
Alw26I	GTCTC	3 cut(s)	593, 1564, 1980
AlwI	GGATC	2 cut(s)	476, 489
Ama87I	CYCGRG	1 cut(s)	1155
Aor13HI	TCCGGA	1 cut(s)	1978
AoxI	GGCC	3 cut(s)	442, 1294, 1754
ApeKI	GCWGC	3 cut(s)	152, 837, 1199
ApoI	RAATTY	4 cut(s)	109, 759, 1160, 1887
AsiGI	ACCGGT	1 cut(s)	450
Asp700I	GAANNNNTTC	1 cut(s)	452
AspS9I	GGNCC	2 cut(s)	575, 1502
AsuC2I	CCSGG	2 cut(s)	359, 1174
AsuHPI	GGTGA	3 cut(s)	1558, 2020, 2075
AsuNHI	GCTAGC	1 cut(s)	1850
AvaI	CYCGRG	1 cut(s)	1155
AvaII	GGWCC	2 cut(s)	575, 1502
BamHI	GGATCC	1 cut(s)	481
BbsI	GAAGAC	1 cut(s)	1993
BbvI	GCAGC	3 cut(s)	139, 824, 1186
BccI	CCATC	7 cut(s)	44, 904, 956, 1189, 1519, 1842, 1988
BciT130I	CCWGG	2 cut(s)	411, 1018
BclI	TGATCA	1 cut(s)	475
BcnI	CCSGG	2 cut(s)	359, 1174
BcoDI	GTCTC	3 cut(s)	593, 1564, 1980
BfmI	CTRYAG	3 cut(s)	555, 1443, 1619
BfuAI	ACCTGC	1 cut(s)	62
BisI	GCNGC	3 cut(s)	153, 838, 1200
BlsI	GCNGC	3 cut(s)	154, 839, 1201
BmcAI	AGTACT	1 cut(s)	1441
Bme1390I	CCNGG	4 cut(s)	359, 411, 1018, 1174
Bme18I	GGWCC	2 cut(s)	575, 1502
BmeT110I	CYCGRG	1 cut(s)	1155
BmgT120I	GGNCC	2 cut(s)	575, 1502
BmiI	GGNNCC	3 cut(s)	455, 483, 773
BmrFI	CCNGG	4 cut(s)	359, 411, 1018, 1174
BmrI	ACTGGG	3 cut(s)	299, 531, 913
BmsI	GCATC	4 cut(s)	244, 857, 1159, 1441
BmtI	GCTAGC	1 cut(s)	1854
BmuI	ACTGGG	3 cut(s)	299, 531, 913
BpiI	GAAGAC	1 cut(s)	1993
BpmI	CTGGAG	3 cut(s)	228, 719, 1365
Bpu10I	CCTNAGC	1 cut(s)	1758
BpuEI	CTTGAG	1 cut(s)	2066
BpuMI	CCSGG	2 cut(s)	359, 1174
BsaBI	GATNNNNATC	1 cut(s)	480
BsaHI	GRCGYC	1 cut(s)	461
BsaI	GGTCTC	1 cut(s)	593
BsaJI	CCNNGG	1 cut(s)	578
BsaWI	WCCGGW	2 cut(s)	450, 1978
Bsc4I	CCNNNNNNNGG	9 cut(s)	120, 197, 270, 491, 584, 863, 903, 904, 1824
Bse118I	RCCGGY	1 cut(s)	450
Bse1I	ACTGG	7 cut(s)	114, 305, 526, 604, 908, 954, 1505
Bse3DI	GCAATG	3 cut(s)	1402, 1861, 1902
Bse8I	GATNNNNATC	1 cut(s)	480
BseAI	TCCGGA	1 cut(s)	1978
BseBI	CCWGG	2 cut(s)	411, 1018
BseDI	CCNNGG	1 cut(s)	578
BseGI	GGATG	3 cut(s)	872, 1200, 1655
BseJI	GATNNNNATC	1 cut(s)	480
BseLI	CCNNNNNNNGG	9 cut(s)	120, 197, 270, 491, 584, 863, 903, 904, 1824
BseMI	GCAATG	3 cut(s)	1402, 1861, 1902
BseMII	CTCAG	4 cut(s)	604, 708, 1197, 1814
BseNI	ACTGG	7 cut(s)	114, 305, 526, 604, 908, 954, 1505
BseRI	GAGGAG	3 cut(s)	671, 1122, 1935
BseXI	GCAGC	3 cut(s)	139, 824, 1186
BsgI	GTGCAG	2 cut(s)	581, 771
BshFI	GGCC	3 cut(s)	444, 1296, 1756
BshTI	ACCGGT	1 cut(s)	450
BsiHKCI	CYCGRG	1 cut(s)	1155
BsiSI	CCGG	4 cut(s)	359, 451, 1173, 1979
BslI	CCNNNNNNNGG	9 cut(s)	120, 197, 270, 491, 584, 863, 903, 904, 1824
BsmAI	GTCTC	3 cut(s)	593, 1564, 1980
BsmI	GAATGC	2 cut(s)	609, 1012
BsnI	GGCC	3 cut(s)	444, 1296, 1756
Bso31I	GGTCTC	1 cut(s)	593
BsoBI	CYCGRG	1 cut(s)	1155
Bsp13I	TCCGGA	1 cut(s)	1978
Bsp143I	GATC	5 cut(s)	346, 475, 481, 1411, 1840
BspACI	CCGC	3 cut(s)	530, 1494, 1627
BspANI	GGCC	3 cut(s)	444, 1296, 1756
BspCNI	CTCAG	4 cut(s)	603, 707, 1198, 1815
BspEI	TCCGGA	1 cut(s)	1978
BspLI	GGNNCC	3 cut(s)	455, 483, 773
BspMI	ACCTGC	1 cut(s)	62
BspOI	GCTAGC	1 cut(s)	1854
BspPI	GGATC	2 cut(s)	476, 489
BspTNI	GGTCTC	1 cut(s)	593
BsrDI	GCAATG	3 cut(s)	1402, 1861, 1902
BsrFI	RCCGGY	1 cut(s)	450
BsrI	ACTGG	7 cut(s)	114, 305, 526, 604, 908, 954, 1505
BssAI	RCCGGY	1 cut(s)	450
BssECI	CCNNGG	1 cut(s)	578
BssMI	GATC	5 cut(s)	346, 475, 481, 1411, 1840
BssNI	GRCGYC	1 cut(s)	461
BssT1I	CCWWGG	1 cut(s)	578
Bst2UI	CCWGG	2 cut(s)	411, 1018
Bst4CI	ACNGT	2 cut(s)	163, 1967
Bst6I	CTCTTC	3 cut(s)	464, 1293, 1940
BstACI	GRCGYC	1 cut(s)	461
BstC8I	GCNNGC	1 cut(s)	1852
BstDEI	CTNAG	6 cut(s)	590, 694, 1206, 1708, 1758, 1823
BstEII	GGTNACC	1 cut(s)	525
BstENI	CCTNNNNNAGG	1 cut(s)	489
BstF5I	GGATG	3 cut(s)	872, 1200, 1655
BstKTI	GATC	5 cut(s)	349, 478, 484, 1414, 1843
BstMAI	GTCTC	3 cut(s)	593, 1564, 1980
BstMBI	GATC	5 cut(s)	346, 475, 481, 1411, 1840
BstNI	CCWGG	2 cut(s)	411, 1018
BstNSI	RCATGY	2 cut(s)	1696, 1975
BstPI	GGTNACC	1 cut(s)	525
BstSCI	CCNGG	4 cut(s)	357, 409, 1016, 1172
BstSFI	CTRYAG	3 cut(s)	555, 1443, 1619
BstV1I	GCAGC	3 cut(s)	139, 824, 1186
BstV2I	GAAGAC	1 cut(s)	1993
BstX2I	RGATCY	1 cut(s)	481
BstYI	RGATCY	1 cut(s)	481
BsuRI	GGCC	3 cut(s)	444, 1296, 1756
BtsCI	GGATG	3 cut(s)	872, 1200, 1655
BtsIMutI	CAGTG	2 cut(s)	947, 1656
BveI	ACCTGC	1 cut(s)	62
Cac8I	GCNNGC	1 cut(s)	1852
Cfr10I	RCCGGY	1 cut(s)	450
Cfr13I	GGNCC	2 cut(s)	575, 1502
CseI	GACGC	1 cut(s)	1233
Csp6I	GTAC	6 cut(s)	124, 139, 242, 935, 1440, 2042
CspAI	ACCGGT	1 cut(s)	450
CspCI	CAANNNNNGTGG	2 cut(s)	289, 324
CviAII	CATG	8 cut(s)	393, 415, 465, 747, 926, 1409, 1693, 1972
CviQI	GTAC	6 cut(s)	124, 139, 242, 935, 1440, 2042
DdeI	CTNAG	6 cut(s)	590, 694, 1206, 1708, 1758, 1823
DpnI	GATC	5 cut(s)	348, 477, 483, 1413, 1842
DpnII	GATC	5 cut(s)	346, 475, 481, 1411, 1840
Eam1104I	CTCTTC	3 cut(s)	464, 1293, 1940
EarI	CTCTTC	3 cut(s)	464, 1293, 1940
Eco130I	CCWWGG	1 cut(s)	578
Eco147I	AGGCCT	2 cut(s)	444, 1296
Eco31I	GGTCTC	1 cut(s)	593
Eco47I	GGWCC	2 cut(s)	575, 1502
Eco57I	CTGAAG	2 cut(s)	1680, 1953
Eco88I	CYCGRG	1 cut(s)	1155
Eco91I	GGTNACC	1 cut(s)	525
EcoNI	CCTNNNNNAGG	1 cut(s)	489
EcoO65I	GGTNACC	1 cut(s)	525
EcoRI	GAATTC	2 cut(s)	759, 1160
EcoRII	CCWGG	2 cut(s)	409, 1016
EcoT14I	CCWWGG	1 cut(s)	578
EcoT22I	ATGCAT	1 cut(s)	1610
ErhI	CCWWGG	1 cut(s)	578
FaeI	CATG	8 cut(s)	396, 418, 468, 750, 929, 1412, 1696, 1975
FatI	CATG	8 cut(s)	392, 414, 464, 746, 925, 1408, 1692, 1971
FauNDI	CATATG	1 cut(s)	829
FbaI	TGATCA	1 cut(s)	475
Fnu4HI	GCNGC	3 cut(s)	153, 838, 1200
FokI	GGATG	3 cut(s)	879, 1207, 1662
Fsp4HI	GCNGC	3 cut(s)	153, 838, 1200
GluI	GCNGC	3 cut(s)	153, 838, 1200
GsuI	CTGGAG	3 cut(s)	228, 719, 1365
HaeIII	GGCC	3 cut(s)	444, 1296, 1756
HapII	CCGG	4 cut(s)	359, 451, 1173, 1979
HgaI	GACGC	1 cut(s)	1233
Hin1I	GRCGYC	1 cut(s)	461
Hin1II	CATG	8 cut(s)	396, 418, 468, 750, 929, 1412, 1696, 1975
HincII	GTYRAC	1 cut(s)	711
HindII	GTYRAC	1 cut(s)	711
HindIII	AAGCTT	3 cut(s)	1481, 1640, 2096
HinfI	GANTC	6 cut(s)	38, 93, 505, 1578, 1814, 1879
HpaI	GTTAAC	1 cut(s)	711
HpaII	CCGG	4 cut(s)	359, 451, 1173, 1979
HphI	GGTGA	3 cut(s)	1558, 2020, 2075
Hpy166II	GTNNAC	5 cut(s)	430, 597, 711, 935, 1052
Hpy188I	TCNGA	6 cut(s)	226, 888, 1168, 1207, 1894, 2017
Hpy8I	GTNNAC	5 cut(s)	430, 597, 711, 935, 1052
HpyAV	CCTTC	8 cut(s)	495, 867, 1106, 1225, 1330, 1523, 1655, 2114
HpyCH4III	ACNGT	2 cut(s)	163, 1967
HpyCH4IV	ACGT	1 cut(s)	461
HpyF3I	CTNAG	6 cut(s)	590, 694, 1206, 1708, 1758, 1823
HpySE526I	ACGT	1 cut(s)	461
Hsp92I	GRCGYC	1 cut(s)	461
Hsp92II	CATG	8 cut(s)	396, 418, 468, 750, 929, 1412, 1696, 1975
Kpn2I	TCCGGA	1 cut(s)	1978
Ksp22I	TGATCA	1 cut(s)	475
KspAI	GTTAAC	1 cut(s)	711
Kzo9I	GATC	5 cut(s)	346, 475, 481, 1411, 1840
LmnI	GCTCC	4 cut(s)	16, 78, 771, 889
Lsp1109I	GCAGC	3 cut(s)	139, 824, 1186
LweI	GCATC	4 cut(s)	244, 857, 1159, 1441
MaeII	ACGT	1 cut(s)	461
MaeIII	GTNAC	8 cut(s)	39, 340, 436, 525, 803, 921, 1213, 1967
MalI	GATC	5 cut(s)	348, 477, 483, 1413, 1842
MboI	GATC	5 cut(s)	346, 475, 481, 1411, 1840
MfeI	CAATTG	2 cut(s)	1075, 1989
MflI	RGATCY	1 cut(s)	481
MlyI	GAGTC	1 cut(s)	47
MmeI	TCCRAC	1 cut(s)	1936
Mph1103I	ATGCAT	1 cut(s)	1610
MroI	TCCGGA	1 cut(s)	1978
MroXI	GAANNNNTTC	1 cut(s)	452
MslI	CAYNNNNRTG	1 cut(s)	930
MspI	CCGG	4 cut(s)	359, 451, 1173, 1979
MspR9I	CCNGG	4 cut(s)	359, 411, 1018, 1174
MunI	CAATTG	2 cut(s)	1075, 1989
Mva1269I	GAATGC	2 cut(s)	609, 1012
MvaI	CCWGG	2 cut(s)	411, 1018
NciI	CCSGG	2 cut(s)	359, 1174
NdeI	CATATG	1 cut(s)	829
NdeII	GATC	5 cut(s)	346, 475, 481, 1411, 1840
NheI	GCTAGC	1 cut(s)	1850
NlaIII	CATG	8 cut(s)	396, 418, 468, 750, 929, 1412, 1696, 1975
NlaIV	GGNNCC	3 cut(s)	455, 483, 773
NmuCI	GTSAC	5 cut(s)	39, 340, 803, 921, 1213
NsiI	ATGCAT	1 cut(s)	1610
NspI	RCATGY	2 cut(s)	1696, 1975
PaeR7I	CTCGAG	1 cut(s)	1155
PaqCI	CACCTGC	1 cut(s)	62
PceI	AGGCCT	2 cut(s)	444, 1296
PciI	ACATGT	1 cut(s)	1971
PctI	GAATGC	2 cut(s)	609, 1012
PdmI	GAANNNNTTC	1 cut(s)	452
PfeI	GAWTC	5 cut(s)	93, 505, 1578, 1814, 1879
PflMI	CCANNNNNTGG	3 cut(s)	120, 197, 270
PinAI	ACCGGT	1 cut(s)	450
PkrI	GCNGC	3 cut(s)	154, 839, 1201
PleI	GAGTC	1 cut(s)	46
PpsI	GAGTC	1 cut(s)	46
PscI	ACATGT	1 cut(s)	1971
PsiI	TTATAA	2 cut(s)	248, 1512
Psp6I	CCWGG	2 cut(s)	409, 1016
PspEI	GGTNACC	1 cut(s)	525
PspGI	CCWGG	2 cut(s)	409, 1016
PspN4I	GGNNCC	3 cut(s)	455, 483, 773
PspPI	GGNCC	2 cut(s)	575, 1502
PsuI	RGATCY	1 cut(s)	481
RsaI	GTAC	6 cut(s)	125, 140, 243, 936, 1441, 2043
RsaNI	GTAC	6 cut(s)	124, 139, 242, 935, 1440, 2042
RseI	CAYNNNNRTG	1 cut(s)	930
SatI	GCNGC	3 cut(s)	153, 838, 1200
Sau3AI	GATC	5 cut(s)	346, 475, 481, 1411, 1840
Sau96I	GGNCC	2 cut(s)	575, 1502
ScaI	AGTACT	1 cut(s)	1441
SchI	GAGTC	1 cut(s)	47
ScrFI	CCNGG	4 cut(s)	359, 411, 1018, 1174
SfaNI	GCATC	4 cut(s)	244, 857, 1159, 1441
SfcI	CTRYAG	3 cut(s)	555, 1443, 1619
Sfr274I	CTCGAG	1 cut(s)	1155
SinI	GGWCC	2 cut(s)	575, 1502
SlaI	CTCGAG	1 cut(s)	1155
SmiMI	CAYNNNNRTG	1 cut(s)	930
SmlI	CTYRAG	2 cut(s)	1155, 2045
SmoI	CTYRAG	2 cut(s)	1155, 2045
SseBI	AGGCCT	2 cut(s)	444, 1296
SsiI	CCGC	3 cut(s)	530, 1494, 1627
SspI	AATATT	1 cut(s)	983
StuI	AGGCCT	2 cut(s)	444, 1296
StyD4I	CCNGG	4 cut(s)	357, 409, 1016, 1172
StyI	CCWWGG	1 cut(s)	578
TaaI	ACNGT	2 cut(s)	163, 1967
TaiI	ACGT	1 cut(s)	464
TaqI	TCGA	2 cut(s)	1156, 1568
TatI	WGTACW	2 cut(s)	241, 1439
TfiI	GAWTC	5 cut(s)	93, 505, 1578, 1814, 1879
TscAI	CASTG	2 cut(s)	954, 1663
TseFI	GTSAC	5 cut(s)	39, 340, 803, 921, 1213
TseI	GCWGC	3 cut(s)	152, 837, 1199
Tsp45I	GTSAC	5 cut(s)	39, 340, 803, 921, 1213
TspDTI	ATGAA	8 cut(s)	431, 1049, 1611, 1701, 1708, 1743, 1796, 1887
TspRI	CASTG	2 cut(s)	954, 1663
Van91I	CCANNNNNTGG	3 cut(s)	120, 197, 270
VpaK11BI	GGWCC	2 cut(s)	575, 1502
XagI	CCTNNNNNAGG	1 cut(s)	489
XapI	RAATTY	4 cut(s)	109, 759, 1160, 1887
XbaI	TCTAGA	1 cut(s)	1414
XceI	RCATGY	2 cut(s)	1696, 1975
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1775
XhoI	CTCGAG	1 cut(s)	1155
XmnI	GAANNNNTTC	1 cut(s)	452
ZraI	GACGTC	1 cut(s)	462
ZrmI	AGTACT	1 cut(s)	1441
Zsp2I	ATGCAT	1 cut(s)	1610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.