pycom02g14390

Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0004214
Physical Location & Seq
Forward (+)
10972000 .. 10973898
1899 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g14390.3

Sequence Viewer

Length: 519 bp
ATGGAGTCGAAAGCTACTGACCCGTCAACTCAACCTCCTGCTAAAGATTCTGGGGTTGAAAATGCTACTGCTGCTGCTGCCTCTGGTCAAGATAATAATAGCACTCAATATGCAAAAGCGGTATCTGGGGTTTTTCTGTCATTTACAAAGGGTTTGGTTAACACGTCTCAGAGTGCAGTGAAGGCTGTGCAGGTCAAGGCGCGCCATTTGGTCTCCCAAAACAAACGAAGATACCAGGAGGGAGGTTTTGATTTGGATCTGACATACATTACTGAGAATATAATTGCGATGGGTTTCCCAGCTGGAGATATAAGTTCCGGCCTATTTGGATATGTTGAGGGTTTTTATCGAAATCATATGGAAGAAGTCATCAGCTTTCTTGAAACTACTCACAAGTTCCGGGAAAATATAAAGTGTACAATCTTTGTTCAGAGAGGTTGTATGATGCATCGCGATTTGAGGGGAAGGCTGCAAGTTACCCAACTTGAGATCATAATTGCCCCCCAATCGAACTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0009267 GO:0009605 GO:0009628 GO:0009651 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc

Protein Analysis

173

Amino Acids

18.93

Weight (kDa)

7.79

Isoelectric Point (pI)

57.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 181
AccII CGCG 2 cut(s) 202, 453
AciI CCGC 1 cut(s) 119
AclWI GGATC 1 cut(s) 264
AfaI GTAC 1 cut(s) 418
AflIII ACRYGT 1 cut(s) 162
AgsI TTSAA 2 cut(s) 59, 383
AjiI CACGTC 1 cut(s) 165
AjnI CCWGG 1 cut(s) 234
AluBI AGCT 3 cut(s) 14, 302, 375
AluI AGCT 3 cut(s) 14, 302, 375
Alw26I GTCTC 2 cut(s) 171, 217
AlwI GGATC 1 cut(s) 264
AoxI GGCC 1 cut(s) 319
ApeKI GCWGC 4 cut(s) 71, 74, 77, 469
AscI GGCGCGCC 1 cut(s) 200
AspLEI GCGC 2 cut(s) 202, 204
AsuC2I CCSGG 1 cut(s) 401
BbvI GCAGC 4 cut(s) 58, 61, 64, 456
BccI CCATC 1 cut(s) 283
BciT130I CCWGG 1 cut(s) 236
BcnI CCSGG 1 cut(s) 401
BcoDI GTCTC 2 cut(s) 171, 217
BfuAI ACCTGC 1 cut(s) 181
BisI GCNGC 4 cut(s) 72, 75, 78, 470
BlsI GCNGC 4 cut(s) 73, 76, 79, 471
Bme1390I CCNGG 2 cut(s) 236, 401
BmgBI CACGTC 1 cut(s) 165
BmrFI CCNGG 2 cut(s) 236, 401
BmsI GCATC 2 cut(s) 435, 457
BpmI CTGGAG 1 cut(s) 324
BpuEI CTTGAG 1 cut(s) 506
BpuMI CCSGG 1 cut(s) 401
BsaBI GATNNNNATC 1 cut(s) 255
BsaI GGTCTC 1 cut(s) 217
BsaXI ACNNNNNCTCC 2 cut(s) 19, 49
Bse8I GATNNNNATC 1 cut(s) 255
BseBI CCWGG 1 cut(s) 236
BseJI GATNNNNATC 1 cut(s) 255
BseMII CTCAG 2 cut(s) 182, 264
BsePI GCGCGC 1 cut(s) 200
BseXI GCAGC 4 cut(s) 58, 61, 64, 456
BseYI CCCAGC 1 cut(s) 298
BsgI GTGCAG 2 cut(s) 195, 209
Bsh1236I CGCG 2 cut(s) 202, 453
BshFI GGCC 1 cut(s) 321
BsiSI CCGG 2 cut(s) 318, 400
BsmAI GTCTC 2 cut(s) 171, 217
BsmBI CGTCTC 1 cut(s) 171
BsnI GGCC 1 cut(s) 321
Bso31I GGTCTC 1 cut(s) 217
Bsp1407I TGTACA 1 cut(s) 416
Bsp143I GATC 2 cut(s) 256, 489
Bsp68I TCGCGA 1 cut(s) 453
BspACI CCGC 1 cut(s) 119
BspANI GGCC 1 cut(s) 321
BspCNI CTCAG 2 cut(s) 181, 265
BspFNI CGCG 2 cut(s) 202, 453
BspMI ACCTGC 1 cut(s) 181
BspPI GGATC 1 cut(s) 264
BspTNI GGTCTC 1 cut(s) 217
BsrGI TGTACA 1 cut(s) 416
BssHII GCGCGC 1 cut(s) 200
BssMI GATC 2 cut(s) 256, 489
Bst2UI CCWGG 1 cut(s) 236
BstAUI TGTACA 1 cut(s) 416
BstC8I GCNNGC 1 cut(s) 202
BstDEI CTNAG 2 cut(s) 168, 273
BstFNI CGCG 2 cut(s) 202, 453
BstHHI GCGC 2 cut(s) 202, 204
BstKTI GATC 2 cut(s) 259, 492
BstMAI GTCTC 2 cut(s) 171, 217
BstMBI GATC 2 cut(s) 256, 489
BstMWI GCNNNNNNNGC 3 cut(s) 71, 77, 182
BstNI CCWGG 1 cut(s) 236
BstSCI CCNGG 2 cut(s) 234, 399
BstUI CGCG 2 cut(s) 202, 453
BstV1I GCAGC 4 cut(s) 58, 61, 64, 456
BstX2I RGATCY 1 cut(s) 256
BstYI RGATCY 1 cut(s) 256
BsuRI GGCC 1 cut(s) 321
BtgZI GCGATG 2 cut(s) 302, 434
BtrI CACGTC 1 cut(s) 165
BtsI GCAGTG 1 cut(s) 183
BtsIMutI CAGTG 1 cut(s) 183
BtuMI TCGCGA 1 cut(s) 453
BveI ACCTGC 1 cut(s) 181
Cac8I GCNNGC 1 cut(s) 202
CfoI GCGC 2 cut(s) 202, 204
Csp6I GTAC 1 cut(s) 417
CviJI RGCY 6 cut(s) 14, 185, 302, 321, 375, 469
CviKI_1 RGCY 6 cut(s) 14, 185, 302, 321, 375, 469
CviQI GTAC 1 cut(s) 417
DdeI CTNAG 2 cut(s) 168, 273
DpnI GATC 2 cut(s) 258, 491
DpnII GATC 2 cut(s) 256, 489
Eco31I GGTCTC 1 cut(s) 217
EcoRII CCWGG 1 cut(s) 234
EcoT22I ATGCAT 1 cut(s) 450
Esp3I CGTCTC 1 cut(s) 171
FauNDI CATATG 1 cut(s) 357
Fnu4HI GCNGC 4 cut(s) 72, 75, 78, 470
Fsp4HI GCNGC 4 cut(s) 72, 75, 78, 470
GlaI GCGC 2 cut(s) 201, 203
GluI GCNGC 4 cut(s) 72, 75, 78, 470
GsaI CCCAGC 1 cut(s) 302
GsuI CTGGAG 1 cut(s) 324
HaeIII GGCC 1 cut(s) 321
HapII CCGG 2 cut(s) 318, 400
HhaI GCGC 2 cut(s) 202, 204
Hin6I GCGC 2 cut(s) 200, 202
HinP1I GCGC 2 cut(s) 200, 202
HincII GTYRAC 2 cut(s) 27, 160
HindII GTYRAC 2 cut(s) 27, 160
HinfI GANTC 2 cut(s) 5, 47
HpaI GTTAAC 1 cut(s) 160
HpaII CCGG 2 cut(s) 318, 400
Hpy166II GTNNAC 3 cut(s) 27, 160, 417
Hpy188I TCNGA 3 cut(s) 171, 261, 432
Hpy188III TCNNGA 3 cut(s) 89, 380, 452
Hpy8I GTNNAC 3 cut(s) 27, 160, 417
HpyAV CCTTC 2 cut(s) 175, 459
HpyCH4IV ACGT 1 cut(s) 164
HpyCH4V TGCA 5 cut(s) 113, 176, 190, 448, 472
HpyF10VI GCNNNNNNNGC 3 cut(s) 71, 77, 182
HpyF3I CTNAG 2 cut(s) 168, 273
HpySE526I ACGT 1 cut(s) 164
HspAI GCGC 2 cut(s) 200, 202
KspAI GTTAAC 1 cut(s) 160
Kzo9I GATC 2 cut(s) 256, 489
Lsp1109I GCAGC 4 cut(s) 58, 61, 64, 456
LweI GCATC 2 cut(s) 435, 457
MaeII ACGT 1 cut(s) 164
MaeIII GTNAC 1 cut(s) 475
MalI GATC 2 cut(s) 258, 491
MboI GATC 2 cut(s) 256, 489
MboII GAAGA 2 cut(s) 240, 374
MflI RGATCY 1 cut(s) 256
MluCI AATT 2 cut(s) 282, 495
MlyI GAGTC 1 cut(s) 14
MnlI CCTC 7 cut(s) 45, 91, 232, 236, 331, 428, 453
Mph1103I ATGCAT 1 cut(s) 450
MseI TTAA 1 cut(s) 159
MspA1I CMGCKG 1 cut(s) 302
MspI CCGG 2 cut(s) 318, 400
MspR9I CCNGG 2 cut(s) 236, 401
MvaI CCWGG 1 cut(s) 236
MvnI CGCG 2 cut(s) 202, 453
MwoI GCNNNNNNNGC 3 cut(s) 71, 77, 182
NciI CCSGG 1 cut(s) 401
NdeI CATATG 1 cut(s) 357
NdeII GATC 2 cut(s) 256, 489
NruI TCGCGA 1 cut(s) 453
NsiI ATGCAT 1 cut(s) 450
PalAI GGCGCGCC 1 cut(s) 200
PauI GCGCGC 1 cut(s) 200
PfeI GAWTC 1 cut(s) 47
PfoI TCCNGGA 1 cut(s) 399
PkrI GCNGC 4 cut(s) 73, 76, 79, 471
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
Psp6I CCWGG 1 cut(s) 234
PspFI CCCAGC 1 cut(s) 298
PspGI CCWGG 1 cut(s) 234
PsuI RGATCY 1 cut(s) 256
PteI GCGCGC 1 cut(s) 200
PvuII CAGCTG 1 cut(s) 302
RruI TCGCGA 1 cut(s) 453
RsaI GTAC 1 cut(s) 418
RsaNI GTAC 1 cut(s) 417
SaqAI TTAA 1 cut(s) 159
SatI GCNGC 4 cut(s) 72, 75, 78, 470
Sau3AI GATC 2 cut(s) 256, 489
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 2 cut(s) 236, 401
SetI ASST 8 cut(s) 16, 37, 167, 195, 247, 304, 377, 439
SfaNI GCATC 2 cut(s) 435, 457
SgsI GGCGCGCC 1 cut(s) 200
SmlI CTYRAG 1 cut(s) 485
SmoI CTYRAG 1 cut(s) 485
Sse9I AATT 2 cut(s) 282, 495
SsiI CCGC 1 cut(s) 119
StyD4I CCNGG 2 cut(s) 234, 399
TaiI ACGT 1 cut(s) 167
TaqI TCGA 3 cut(s) 8, 349, 509
TasI AATT 2 cut(s) 282, 495
TatI WGTACW 1 cut(s) 416
TfiI GAWTC 1 cut(s) 47
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TscAI CASTG 1 cut(s) 183
TseI GCWGC 4 cut(s) 71, 74, 77, 469
TspRI CASTG 1 cut(s) 183
Zsp2I ATGCAT 1 cut(s) 450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.