Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0012855

Physical Location & Seq

Genomic Coordinates Reverse (-)

11006861 .. 11011387

Gene Structure 4527 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g18710.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3072 bp

ATGCGGCCCCTCCTCCTCTTCCTCCTCCTTCTCCTCCTCCACCTCCGCCACTCTCTCTCCTCACCCCACCGTCTACTCTCCACCCCCACGCGCCCAATGGCCACCTACCGCGCCCTCCTCTCCCTCAAGTCGTCCCTCGACGACCCCGACTCCCGCCTCTCCTCCTGGACACCCAACACCAGCCACTGCACTTGGGCCGGCGTCACGTGCGACTCCCACAACCACGTGACCTCCCTCGACCTTTCCGGCTTGAATCTCTCCGGGTATCTCTCCCCCGATATCGCCTTCCTTGTCTACCTCTCCAATCTCACCCTCGCCGAGAACAACCTCTCCGGTCCCATCCCGCCTGAGATCTCCGCCCTCCCCGCTCTCCGCCTACTCAACCTCTCCAACAACGTCTTCAACCGCACGTTCCCGCCGGAGCTCTCCAACCTCACTAACCTCCGTGTTCTCGACCTCTACAACAACAACCTCACCGGAGTGTTACCGGTTTCGGTGACTCACATGACCAACCTCCGCCATTTGCATCTGGGTGGCAACTTTTTCGAGGGCTCGATCCCCCCGGAGTACGGCCAGTTCCCGTTTCTCGAGTACTTGGCCGTCTCCGGGAACTCCATTACCGGGAAAATCCCCAAGGAGATCGGAAACTTGACCCGGCTCAAGGAGCTTTACATTGGCTACTTCAACAGCTACGACGGCGGCATCCCAGCCGAGATCGGGAACTTGACACAGCTCATCCGGTTCGATGCCGCCAACTGTAATTTATCCGGCGAGATCCCGCCGGAGCTGGGTCGGTTGCAGAATGTGGATACTCTGTTTCTCCAGGTGAATGCGCTTTCTGGGTCATTGACGTCTGAGCTGGGCTCTCTCAAAAGCTTGAAATCCATGGACTTATCCAACAACTTATTCTCCGGCGAGATTCCGACCTCTTTCGCAGAGCTGAAGAACCTGACGCTGCTTAATCTTTTCCGGAACCAGCTTCACGGCGCCATTCCGGACTTCATCGGTGACTTGCCGGAGCTCCAGGTTCTGCAGCTATGGGAGAACAACTTCACTGGGTCTATTCCTCAAAGTTTGGGCAGAAATGGGAAGCTTCAACTCGTCGACTTATCTTCGAACAAATTGACCGGAGCTCTTCCACCGGATATGTGCTCCGGCAACAATCTCCAGACCCTCATCACTCTCGGCAACTTTCTCTTCGGTCCTATTCCAGAGTCGCTCGGAGAGTGTAAGTCACTGAGTCGGATTCGAATGGGTGAGAACTTTCTAAATGGGTCGATTCCTAAAGGCCTATTCGGGTTGCCCAAGCTCACTCAAGTTGAGCTGCAAGACAATTTCTTGAACGGTCCATTTCCGGTGTCTGATTCAGTCTCTGCTGGTCTCGGTCAGATTAGTCTTTCCAACAACAGGTTATCGGGGCCATTGCCGCCGGCTATCGGAAACTTCACTGGCGTCCAGAAGCTTCTCCTCGACGGGAACAAGTTCTCGGGTCGTATTCCTCCCGAGATTGGACACCTAGAGCAACTCTCGAAAATCGATTTTAGTCACAATCTGTTTTCGGGTCCAATAGCGCCAGAGATTAGCCGATGCAAGGTGCTGGCGTATGTTGATCTCAGTCGAAATGAGCTATCTGGTGAGATTCCGAAAGAGATTACTGGTATGAGGATATTGAATTACCTCAATCTGTCAAGGAACCATCTTGTGGGGAACATCCCAGCTCCCATTTCCGCAATGCAGAGCTTAACCTCGGTGGATTTTTCTTATAACAATCTTTCGGGTTTGGTTCCTGGTACTGGTCAGTTCAGCTACTTCAATTACACTTCGTTTTTGGGTAACCCTGATCTTTGCGGTCCTTATTTGGTTCCTTGCAAAGATGGGGTTGCAAATGGCACTCGTCAGCCTCATGTCAAGAGCTCATTCACTGCTTCGCTGAAGCTATTGCTGGTTGTTGGGTTGTTACTTTGCTCGATCATATTTGCTGTTATTACAATAATCAAAGCTCGTTCGTACAAGAGAGAAAGGGACTCCAGAGCTTGGAAGTTGACTGCATTCCAGCGCTTGGATTTCACTGTTGATGATGTCTTGGATTCACTCAAGGAAGACAACATTATAGGCAAAGGAGGTGCTGGGATTGTGTACAAAGGGGCTATGCCTAGTGGTGACAATGTGGCTGTGAAAAGACTCCCTGCAATGAGCCGAGGCTCTTCTCATGATCATGGATTCAATGCCGAGATTCAGACTCTGGGTAAAATTCGACACCGTCACATTGTTAGATTGTTGGGTTTCTGTTCAAACCACGAGACAAATCTTCTGGTCTATGAGTACATGCCTAATGGGAGTTTGGGTGAGGTTCTTCATGGCAAGAAAGGAGGTCACTTGCATTGGGATACAAGGTACAAGATTGCCATTGAGTCTGCAAAGGGCCTTTGCTATCTTCACCATGACTGTTCACCTTTGATCGTCCATAGAGATGTGAAATCAAACAACATTCTACTGGACTCCAATTTTGAGGCTCATGTAGCTGATTTCGGCCTTGCCAAGTTCCTCCAGGATTCGGGCACGTCTGAGTGCATGTCTGCCATTGCTGGTTCTTATGGATACATTGCTCCAGAGTATGCTTACACATTAAAGGTTGATGAGAAGAGCGACGTCTATAGTTTCGGTGTAGTTCTCTTGGAACTTGTAAGTGGCAAGAAACCAGTTGGTGAATTTGGAGATGGAGTAGACATAGTCCAGTGGGTTCGGAAAATGACTGATTCAAACAAGGAAGGAGTCCTGAAAATCCTTGATTCCAGACTCCCTTCTGTTCCCCTCCATGAGGTTATGCACGTATTTTACGTTGCAATGCTCTGTGTTGAAGAACAAGCAGTGGAGCGTCCAACAATGAGAGAAGTGGTTCAAATTCTCACAGAGCTTCCAATTCCACCAGGCTCAAAGCAAGTAGGAGAGACAACAACAGTCACAGACTCCCCTCAACAATCTGCCATTACTGCAATTGAATCACCAACCACCACAAAAGACCATCAACAGCCACCGCCGCAATCACCACCGCCGGATCTTCTAAGCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009908 GO:0010073 GO:0010075 GO:0016020 GO:0022414 GO:0032501 GO:0032502 GO:0033612 GO:0040008 GO:0043621 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048507 GO:0048509 GO:0048608 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0061458 GO:0065007 GO:0071944 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1024

Amino Acids

111.84

Weight (kDa)

6.25

Isoelectric Point (pI)

36.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	37 - 71	1.4e-12	Leucine rich repeat N-terminal domain
LRR_14	PF23598	117 - 178	6.7e-06	Leucine-rich repeat region
LRR_14	PF23598	140 - 278	1e-13	Leucine-rich repeat region
LRR_8	PF13855	143 - 180	1e-06	Leucine rich repeat
LRR_4	PF12799	146 - 180	2.9e-06	Leucine Rich repeats (2 copies)
LRR_14	PF23598	281 - 395	1.7e-06	Leucine-rich repeat region
PK_Tyr_Ser-Thr	PF07714	700 - 969	1.7e-45	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	700 - 967	3.3e-44	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012855)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49670 AT5G65700 AT5G65700
fragaria_vesca	FvH4_1g18710
malus_domestica	MD02G1194600.v1.1 MD15G1304900.v1.1
prunus_persica	Prupe.6G212200_v2.0.a1
pyrus_communis	pycom02g15850 pycom15g26730
rosa_chinensis	RchiOBHm_Chr2g0109581
rosa_laevigata	RLG00000017747
rosa_multiflora	Rmu_sc0000332.1_g000045
rosa_roxburghii	Rroxscaffold_2G00134130
rosa_rugosa	Rorug02G0160800
rosa_samantha	Rh2AG213200 Rh2BG223400 Rh2CG215200 Rh2DG218700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1764
AatII	GACGTC	2 cut(s)	854, 2652
AccB1I	GGYRCC	1 cut(s)	986
AccB7I	CCANNNNNTGG	3 cut(s)	1702, 2034, 2059
AccBSI	CCGCTC	1 cut(s)	368
AccI	GTMKAC	4 cut(s)	73, 294, 1104, 2724
AccII	CGCG	2 cut(s)	91, 111
AccIII	TCCGGA	2 cut(s)	969, 994
AclWI	GGATC	3 cut(s)	550, 769, 3063
AcoI	YGGCCR	3 cut(s)	99, 571, 597
AcsI	RAATTY	3 cut(s)	2250, 2708, 2901
AcuI	CTGAAG	2 cut(s)	962, 1952
AcvI	CACGTG	2 cut(s)	207, 226
AcyI	GRCGYC	5 cut(s)	201, 851, 987, 1452, 2649
AfaI	GTAC	7 cut(s)	569, 593, 1792, 2009, 2138, 2324, 2396
AfeI	AGCGCT	1 cut(s)	2057
AgeI	ACCGGT	1 cut(s)	487
AjiI	CACGTC	1 cut(s)	2562
AjnI	CCWGG	6 cut(s)	164, 822, 1023, 1786, 2547, 2926
AjuI	GAANNNNNNNTTGG	4 cut(s)	383, 415, 890, 922
AleI	CACNNNNGTG	1 cut(s)	479
AloI	GAACNNNNNNTCC	2 cut(s)	314, 346
Alw21I	GWGCWC	5 cut(s)	426, 1023, 1135, 1154, 1916
Alw26I	GTCTC	5 cut(s)	607, 1375, 1385, 2294, 2942
AlwI	GGATC	3 cut(s)	550, 769, 3063
AlwNI	CAGNNNCTG	4 cut(s)	186, 1030, 1373, 2242
Ama87I	CYCGRG	3 cut(s)	587, 1486, 1502
Aor13HI	TCCGGA	2 cut(s)	969, 994
Aor51HI	AGCGCT	1 cut(s)	2057
AoxI	GGCC	9 cut(s)	5, 99, 195, 571, 597, 1288, 1418, 2422, 2530
ApeKI	GCWGC	3 cut(s)	955, 1033, 1324
ApoI	RAATTY	3 cut(s)	2250, 2708, 2901
ArsI	GACNNNNNNTTYG	2 cut(s)	2489, 2521
AsiGI	ACCGGT	1 cut(s)	487
Asp700I	GAANNNNTTC	3 cut(s)	1049, 1481, 2895
AspLEI	GCGC	6 cut(s)	93, 113, 835, 989, 1573, 2058
AspS9I	GGNCC	9 cut(s)	6, 195, 335, 1202, 1346, 1418, 1562, 1850, 2422
AsuC2I	CCSGG	5 cut(s)	262, 563, 607, 622, 655
AsuII	TTCGAA	2 cut(s)	1115, 1249
AvaI	CYCGRG	3 cut(s)	587, 1486, 1502
AvaII	GGWCC	5 cut(s)	335, 1202, 1346, 1562, 1850
BaeGI	GKGCMC	1 cut(s)	2561
BalI	TGGCCA	1 cut(s)	101
BanI	GGYRCC	1 cut(s)	986
BanII	GRGCYC	6 cut(s)	426, 554, 866, 1023, 1135, 1916
BauI	CACGAG	1 cut(s)	2297
BbrPI	CACGTG	2 cut(s)	207, 226
BbsI	GAAGAC	2 cut(s)	391, 2106
Bbv12I	GWGCWC	5 cut(s)	426, 1023, 1135, 1154, 1916
BbvI	GCAGC	3 cut(s)	942, 1045, 1311
BccI	CCATC	5 cut(s)	347, 1704, 1868, 2711, 3030
BceAI	ACGGC	4 cut(s)	584, 586, 712, 1000
BcgI	CGANNNNNNTGC	2 cut(s)	526, 560
BciT130I	CCWGG	6 cut(s)	166, 824, 1025, 1788, 2549, 2928
BciVI	GTATCC	3 cut(s)	802, 2380, 2591
BclI	TGATCA	1 cut(s)	2212
BcnI	CCSGG	5 cut(s)	262, 563, 607, 622, 655
BcoDI	GTCTC	5 cut(s)	607, 1375, 1385, 2294, 2942
BfaI	CTAG	2 cut(s)	1517, 2154
BfmI	CTRYAG	2 cut(s)	1031, 2653
BfoI	RGCGCY	3 cut(s)	990, 1574, 2059
BfuI	GTATCC	3 cut(s)	802, 2380, 2591
BglII	AGATCT	1 cut(s)	351
BisI	GCNGC	8 cut(s)	5, 700, 750, 956, 1034, 1325, 1427, 3038
BlsI	GCNGC	8 cut(s)	6, 701, 751, 957, 1035, 1326, 1428, 3039
BmcAI	AGTACT	1 cut(s)	593
Bme18I	GGWCC	5 cut(s)	335, 1202, 1346, 1562, 1850
BmeT110I	CYCGRG	3 cut(s)	587, 1486, 1502
BmgBI	CACGTC	1 cut(s)	2562
BmgT120I	GGNCC	9 cut(s)	6, 195, 335, 1202, 1346, 1418, 1562, 1850, 2422
BmiI	GGNNCC	9 cut(s)	8, 337, 974, 988, 1419, 1563, 1694, 1785, 1863
BmrI	ACTGGG	1 cut(s)	1065
BmsI	GCATC	4 cut(s)	535, 711, 736, 1577
BmuI	ACTGGG	1 cut(s)	1065
BpiI	GAAGAC	2 cut(s)	391, 2106
BplI	GAGNNNNNCTC	4 cut(s)	848, 880, 1511, 1543
BpmI	CTGGAG	6 cut(s)	806, 1007, 1151, 2011, 2531, 2592
Bpu14I	TTCGAA	2 cut(s)	1115, 1249
BpuEI	CTTGAG	4 cut(s)	110, 644, 1299, 2078
BpuMI	CCSGG	5 cut(s)	262, 563, 607, 622, 655
Bsa29I	ATCGAT	1 cut(s)	1536
BsaAI	YACGTR	3 cut(s)	207, 226, 2830
BsaHI	GRCGYC	5 cut(s)	201, 851, 987, 1452, 2649
BsaI	GGTCTC	1 cut(s)	1385
BsaJI	CCNNGG	5 cut(s)	561, 633, 885, 1746, 2197
BsaWI	WCCGGW	9 cut(s)	332, 476, 487, 738, 969, 994, 1127, 1141, 1354
Bse118I	RCCGGY	3 cut(s)	197, 487, 1429
Bse1I	ACTGG	8 cut(s)	574, 1060, 1453, 1660, 1798, 2499, 2699, 2734
Bse3DI	GCAATG	6 cut(s)	1421, 1737, 2196, 2580, 2601, 2850
BseAI	TCCGGA	2 cut(s)	969, 994
BseBI	CCWGG	6 cut(s)	166, 824, 1025, 1788, 2549, 2928
BseCI	ATCGAT	1 cut(s)	1536
BseDI	CCNNGG	5 cut(s)	561, 633, 885, 1746, 2197
BseGI	GGATG	4 cut(s)	339, 702, 735, 1710
BseMI	GCAATG	6 cut(s)	1421, 1737, 2196, 2580, 2601, 2850
BseMII	CTCAG	5 cut(s)	339, 846, 1229, 1627, 2556
BseNI	ACTGG	8 cut(s)	574, 1060, 1453, 1660, 1798, 2499, 2699, 2734
BseRI	GAGGAG	8 cut(s)	5, 14, 23, 26, 49, 107, 151, 1457
BseSI	GKGCMC	1 cut(s)	2561
BseXI	GCAGC	3 cut(s)	942, 1045, 1311
BseYI	CCCAGC	5 cut(s)	706, 787, 859, 1714, 2126
BsgI	GTGCAG	1 cut(s)	172
Bsh1236I	CGCG	2 cut(s)	91, 111
BshFI	GGCC	9 cut(s)	7, 101, 197, 573, 599, 1290, 1420, 2424, 2532
BshNI	GGYRCC	1 cut(s)	986
BshTI	ACCGGT	1 cut(s)	487
BshVI	ATCGAT	1 cut(s)	1536
BsiHKAI	GWGCWC	5 cut(s)	426, 1023, 1135, 1154, 1916
BsiHKCI	CYCGRG	3 cut(s)	587, 1486, 1502
BslFI	GGGAC	3 cut(s)	118, 321, 2036
BsmAI	GTCTC	5 cut(s)	607, 1375, 1385, 2294, 2942
BsmBI	CGTCTC	1 cut(s)	607
BsmFI	GGGAC	3 cut(s)	118, 321, 2036
BsmI	GAATGC	2 cut(s)	835, 2048
BsnI	GGCC	9 cut(s)	7, 101, 197, 573, 599, 1290, 1420, 2424, 2532
Bso31I	GGTCTC	1 cut(s)	1385
BsoBI	CYCGRG	3 cut(s)	587, 1486, 1502
Bsp119I	TTCGAA	2 cut(s)	1115, 1249
Bsp1286I	GDGCHC	8 cut(s)	426, 554, 866, 1023, 1135, 1154, 1916, 2561
Bsp13I	TCCGGA	2 cut(s)	969, 994
Bsp1407I	TGTACA	1 cut(s)	2136
Bsp19I	CCATGG	1 cut(s)	885
BspANI	GGCC	9 cut(s)	7, 101, 197, 573, 599, 1290, 1420, 2424, 2532
BspCNI	CTCAG	5 cut(s)	340, 847, 1230, 1626, 2557
BspDI	ATCGAT	1 cut(s)	1536
BspEI	TCCGGA	2 cut(s)	969, 994
BspFNI	CGCG	2 cut(s)	91, 111
BspHI	TCATGA	1 cut(s)	2209
BspLI	GGNNCC	9 cut(s)	8, 337, 974, 988, 1419, 1563, 1694, 1785, 1863
BspMAI	CTGCAG	1 cut(s)	1035
BspPI	GGATC	3 cut(s)	550, 769, 3063
BspQI	GCTCTTC	3 cut(s)	1140, 2209, 2636
BspT104I	TTCGAA	2 cut(s)	1115, 1249
BspT107I	GGYRCC	1 cut(s)	986
BspTNI	GGTCTC	1 cut(s)	1385
BsrBI	CCGCTC	1 cut(s)	368
BsrDI	GCAATG	6 cut(s)	1421, 1737, 2196, 2580, 2601, 2850
BsrFI	RCCGGY	3 cut(s)	197, 487, 1429
BsrGI	TGTACA	1 cut(s)	2136
BsrI	ACTGG	8 cut(s)	574, 1060, 1453, 1660, 1798, 2499, 2699, 2734
BssAI	RCCGGY	3 cut(s)	197, 487, 1429
BssECI	CCNNGG	5 cut(s)	561, 633, 885, 1746, 2197
BssNI	GRCGYC	5 cut(s)	201, 851, 987, 1452, 2649
BssSI	CACGAG	1 cut(s)	2297
BssT1I	CCWWGG	2 cut(s)	633, 885
Bst2BI	CACGAG	1 cut(s)	2297
Bst2UI	CCWGG	6 cut(s)	166, 824, 1025, 1788, 2549, 2928
Bst4CI	ACNGT	7 cut(s)	71, 758, 1346, 2071, 2261, 2447, 2959
Bst6I	CTCTTC	5 cut(s)	23, 1140, 1202, 2209, 2636
BstACI	GRCGYC	5 cut(s)	201, 851, 987, 1452, 2649
BstAUI	TGTACA	1 cut(s)	2136
BstBAI	YACGTR	3 cut(s)	207, 226, 2830
BstBI	TTCGAA	2 cut(s)	1115, 1249
BstC8I	GCNNGC	3 cut(s)	199, 1431, 1599
BstDEI	CTNAG	6 cut(s)	348, 855, 1238, 1613, 2565, 3062
BstDSI	CCRYGG	1 cut(s)	885
BstEII	GGTNACC	1 cut(s)	1832
BstENI	CCTNNNNNAGG	1 cut(s)	2816
BstF5I	GGATG	4 cut(s)	339, 702, 735, 1710
BstFNI	CGCG	2 cut(s)	91, 111
BstH2I	RGCGCY	3 cut(s)	990, 1574, 2059
BstHHI	GCGC	6 cut(s)	93, 113, 835, 989, 1573, 2058
BstMAI	GTCTC	5 cut(s)	607, 1375, 1385, 2294, 2942
BstMWI	GCNNNNNNNGC	8 cut(s)	207, 365, 664, 696, 1426, 2519, 2990, 3037
BstNI	CCWGG	6 cut(s)	166, 824, 1025, 1788, 2549, 2928
BstNSI	RCATGY	2 cut(s)	2329, 2575
BstPI	GGTNACC	1 cut(s)	1832
BstSFI	CTRYAG	2 cut(s)	1031, 2653
BstSLI	GKGCMC	1 cut(s)	2561
BstUI	CGCG	2 cut(s)	91, 111
BstV1I	GCAGC	3 cut(s)	942, 1045, 1311
BstV2I	GAAGAC	2 cut(s)	391, 2106
BstX2I	RGATCY	3 cut(s)	351, 774, 3055
BstYI	RGATCY	3 cut(s)	351, 774, 3055
Bsu15I	ATCGAT	1 cut(s)	1536
BsuI	GTATCC	3 cut(s)	802, 2380, 2591
BsuRI	GGCC	9 cut(s)	7, 101, 197, 573, 599, 1290, 1420, 2424, 2532
BsuTUI	ATCGAT	1 cut(s)	1536
BtgI	CCRYGG	1 cut(s)	885
BtrI	CACGTC	1 cut(s)	2562
BtsCI	GGATG	4 cut(s)	339, 702, 735, 1710
BtsI	GCAGTG	3 cut(s)	184, 1920, 2874
BtsIMutI	CAGTG	8 cut(s)	184, 1053, 1235, 1446, 1920, 2067, 2741, 2874
Cac8I	GCNNGC	3 cut(s)	199, 1431, 1599
CaiI	CAGNNNCTG	4 cut(s)	186, 1030, 1373, 2242
CciI	TCATGA	1 cut(s)	2209
CfoI	GCGC	6 cut(s)	93, 113, 835, 989, 1573, 2058
Cfr10I	RCCGGY	3 cut(s)	197, 487, 1429
Cfr13I	GGNCC	9 cut(s)	6, 195, 335, 1202, 1346, 1418, 1562, 1850, 2422
ClaI	ATCGAT	1 cut(s)	1536
CseI	GACGC	4 cut(s)	190, 961, 1441, 2864
Csp6I	GTAC	7 cut(s)	568, 592, 1791, 2008, 2137, 2323, 2395
CspAI	ACCGGT	1 cut(s)	487
CspCI	CAANNNNNGTGG	2 cut(s)	173, 208
CviQI	GTAC	7 cut(s)	568, 592, 1791, 2008, 2137, 2323, 2395
DdeI	CTNAG	6 cut(s)	348, 855, 1238, 1613, 2565, 3062
DinI	GGCGCC	1 cut(s)	988
EaeI	YGGCCR	3 cut(s)	99, 571, 597
Eam1104I	CTCTTC	5 cut(s)	23, 1140, 1202, 2209, 2636
EarI	CTCTTC	5 cut(s)	23, 1140, 1202, 2209, 2636
EciI	GGCGGA	4 cut(s)	35, 346, 362, 506
Ecl136II	GAGCTC	4 cut(s)	424, 1021, 1133, 1914
Eco130I	CCWWGG	2 cut(s)	633, 885
Eco147I	AGGCCT	1 cut(s)	1290
Eco24I	GRGCYC	6 cut(s)	426, 554, 866, 1023, 1135, 1916
Eco31I	GGTCTC	1 cut(s)	1385
Eco32I	GATATC	1 cut(s)	280
Eco47I	GGWCC	5 cut(s)	335, 1202, 1346, 1562, 1850
Eco47III	AGCGCT	1 cut(s)	2057
Eco53kI	GAGCTC	4 cut(s)	424, 1021, 1133, 1914
Eco57I	CTGAAG	2 cut(s)	962, 1952
Eco72I	CACGTG	2 cut(s)	207, 226
Eco88I	CYCGRG	3 cut(s)	587, 1486, 1502
Eco91I	GGTNACC	1 cut(s)	1832
EcoICRI	GAGCTC	4 cut(s)	424, 1021, 1133, 1914
EcoNI	CCTNNNNNAGG	1 cut(s)	2816
EcoO109I	RGGNCCY	1 cut(s)	2422
EcoO65I	GGTNACC	1 cut(s)	1832
EcoRII	CCWGG	6 cut(s)	164, 822, 1023, 1786, 2547, 2926
EcoRV	GATATC	1 cut(s)	280
EcoT14I	CCWWGG	2 cut(s)	633, 885
EcoT38I	GRGCYC	6 cut(s)	426, 554, 866, 1023, 1135, 1916
EgeI	GGCGCC	1 cut(s)	988
EheI	GGCGCC	1 cut(s)	988
ErhI	CCWWGG	2 cut(s)	633, 885
Esp3I	CGTCTC	1 cut(s)	607
FaqI	GGGAC	3 cut(s)	118, 321, 2036
FauI	CCCGC	5 cut(s)	161, 351, 373, 423, 786
FbaI	TGATCA	1 cut(s)	2212
FblI	GTMKAC	4 cut(s)	73, 294, 1104, 2724
Fnu4HI	GCNGC	8 cut(s)	5, 700, 750, 956, 1034, 1325, 1427, 3038
FokI	GGATG	4 cut(s)	326, 689, 722, 1697
FriOI	GRGCYC	6 cut(s)	426, 554, 866, 1023, 1135, 1916
Fsp4HI	GCNGC	8 cut(s)	5, 700, 750, 956, 1034, 1325, 1427, 3038
FspBI	CTAG	2 cut(s)	1517, 2154
GlaI	GCGC	6 cut(s)	92, 112, 834, 988, 1572, 2057
GluI	GCNGC	8 cut(s)	5, 700, 750, 956, 1034, 1325, 1427, 3038
GsaI	CCCAGC	5 cut(s)	710, 791, 863, 1718, 2130
GsuI	CTGGAG	6 cut(s)	806, 1007, 1151, 2011, 2531, 2592
HaeII	RGCGCY	3 cut(s)	990, 1574, 2059
HaeIII	GGCC	9 cut(s)	7, 101, 197, 573, 599, 1290, 1420, 2424, 2532
HgaI	GACGC	4 cut(s)	190, 961, 1441, 2864
HhaI	GCGC	6 cut(s)	93, 113, 835, 989, 1573, 2058
Hin1I	GRCGYC	5 cut(s)	201, 851, 987, 1452, 2649
Hin6I	GCGC	6 cut(s)	91, 111, 833, 987, 1571, 2056
HinP1I	GCGC	6 cut(s)	91, 111, 833, 987, 1571, 2056
HincII	GTYRAC	2 cut(s)	1105, 2043
HindII	GTYRAC	2 cut(s)	1105, 2043
HindIII	AAGCTT	3 cut(s)	874, 1091, 1460
Hpy166II	GTNNAC	7 cut(s)	74, 295, 1105, 2043, 2137, 2450, 2725
Hpy8I	GTNNAC	7 cut(s)	74, 295, 1105, 2043, 2137, 2450, 2725
Hpy99I	CGWCG	5 cut(s)	143, 698, 1106, 1475, 2651
HpyAV	CCTTC	4 cut(s)	38, 295, 2762, 2811
HpyCH4III	ACNGT	7 cut(s)	71, 758, 1346, 2071, 2261, 2447, 2959
HpyCH4IV	ACGT	9 cut(s)	206, 225, 396, 410, 851, 2561, 2649, 2829, 2838
HpyF10VI	GCNNNNNNNGC	8 cut(s)	207, 365, 664, 696, 1426, 2519, 2990, 3037
HpyF3I	CTNAG	6 cut(s)	348, 855, 1238, 1613, 2565, 3062
HpySE526I	ACGT	9 cut(s)	206, 225, 396, 410, 851, 2561, 2649, 2829, 2838
Hsp92I	GRCGYC	5 cut(s)	201, 851, 987, 1452, 2649
HspAI	GCGC	6 cut(s)	91, 111, 833, 987, 1571, 2056
KasI	GGCGCC	1 cut(s)	986
Kpn2I	TCCGGA	2 cut(s)	969, 994
KroI	GCCGGC	2 cut(s)	197, 1429
KroNI	GCCGGC	2 cut(s)	199, 1431
Ksp22I	TGATCA	1 cut(s)	2212
LguI	GCTCTTC	3 cut(s)	1140, 2209, 2636
Lsp1109I	GCAGC	3 cut(s)	942, 1045, 1311
LweI	GCATC	4 cut(s)	535, 711, 736, 1577
MaeI	CTAG	2 cut(s)	1517, 2154
MaeII	ACGT	9 cut(s)	206, 225, 396, 410, 851, 2561, 2649, 2829, 2838
MbiI	CCGCTC	1 cut(s)	368
MfeI	CAATTG	1 cut(s)	2994
MflI	RGATCY	3 cut(s)	351, 774, 3055
MhlI	GDGCHC	8 cut(s)	426, 554, 866, 1023, 1135, 1154, 1916, 2561
MlsI	TGGCCA	1 cut(s)	101
MluNI	TGGCCA	1 cut(s)	101
Mly113I	GGCGCC	1 cut(s)	987
MmeI	TCCRAC	7 cut(s)	414, 453, 921, 947, 1223, 1425, 2903
Mox20I	TGGCCA	1 cut(s)	101
MroI	TCCGGA	2 cut(s)	969, 994
MroNI	GCCGGC	2 cut(s)	197, 1429
MroXI	GAANNNNTTC	3 cut(s)	1049, 1481, 2895
MscI	TGGCCA	1 cut(s)	101
MseI	TTAA	3 cut(s)	960, 1742, 2627
MslI	CAYNNNNRTG	4 cut(s)	479, 531, 2214, 2469
Msp20I	TGGCCA	1 cut(s)	101
MunI	CAATTG	1 cut(s)	2994
Mva1269I	GAATGC	2 cut(s)	835, 2048
MvaI	CCWGG	6 cut(s)	166, 824, 1025, 1788, 2549, 2928
MvnI	CGCG	2 cut(s)	91, 111
MwoI	GCNNNNNNNGC	8 cut(s)	207, 365, 664, 696, 1426, 2519, 2990, 3037
NaeI	GCCGGC	2 cut(s)	199, 1431
NarI	GGCGCC	1 cut(s)	987
NciI	CCSGG	5 cut(s)	262, 563, 607, 622, 655
NcoI	CCATGG	1 cut(s)	885
NgoMIV	GCCGGC	2 cut(s)	197, 1429
NlaIV	GGNNCC	9 cut(s)	8, 337, 974, 988, 1419, 1563, 1694, 1785, 1863
NmeAIII	GCCGAG	5 cut(s)	343, 736, 1164, 2222, 2254
NspI	RCATGY	2 cut(s)	2329, 2575
NspV	TTCGAA	2 cut(s)	1115, 1249
OliI	CACNNNNGTG	1 cut(s)	479
PaeR7I	CTCGAG	1 cut(s)	587
PagI	TCATGA	1 cut(s)	2209
PceI	AGGCCT	1 cut(s)	1290
PciSI	GCTCTTC	3 cut(s)	1140, 2209, 2636
PcsI	WCGNNNNNNNCGW	2 cut(s)	144, 2835
PctI	GAATGC	2 cut(s)	835, 2048
PdiI	GCCGGC	2 cut(s)	199, 1431
PdmI	GAANNNNTTC	3 cut(s)	1049, 1481, 2895
PflFI	GACNNNGTC	2 cut(s)	2259, 2729
PflMI	CCANNNNNTGG	3 cut(s)	1702, 2034, 2059
PfoI	TCCNGGA	3 cut(s)	164, 605, 2547
PinAI	ACCGGT	1 cut(s)	487
PkrI	GCNGC	8 cut(s)	6, 701, 751, 957, 1035, 1326, 1428, 3039
PluTI	GGCGCC	1 cut(s)	990
PmaCI	CACGTG	2 cut(s)	207, 226
PmlI	CACGTG	2 cut(s)	207, 226
Ppu21I	YACGTR	3 cut(s)	207, 226, 2830
PsiI	TTATAA	1 cut(s)	1764
Psp124BI	GAGCTC	4 cut(s)	426, 1023, 1135, 1916
Psp6I	CCWGG	6 cut(s)	164, 822, 1023, 1786, 2547, 2926
PspCI	CACGTG	2 cut(s)	207, 226
PspEI	GGTNACC	1 cut(s)	1832
PspFI	CCCAGC	5 cut(s)	706, 787, 859, 1714, 2126
PspGI	CCWGG	6 cut(s)	164, 822, 1023, 1786, 2547, 2926
PspN4I	GGNNCC	9 cut(s)	8, 337, 974, 988, 1419, 1563, 1694, 1785, 1863
PspPI	GGNCC	9 cut(s)	6, 195, 335, 1202, 1346, 1418, 1562, 1850, 2422
PsrI	GAACNNNNNNTAC	2 cut(s)	560, 592
PstI	CTGCAG	1 cut(s)	1035
PstNI	CAGNNNCTG	4 cut(s)	186, 1030, 1373, 2242
PsuI	RGATCY	3 cut(s)	351, 774, 3055
PsyI	GACNNNGTC	2 cut(s)	2259, 2729
RsaI	GTAC	7 cut(s)	569, 593, 1792, 2009, 2138, 2324, 2396
RsaNI	GTAC	7 cut(s)	568, 592, 1791, 2008, 2137, 2323, 2395
RseI	CAYNNNNRTG	4 cut(s)	479, 531, 2214, 2469
SacI	GAGCTC	4 cut(s)	426, 1023, 1135, 1916
SalI	GTCGAC	1 cut(s)	1103
SapI	GCTCTTC	3 cut(s)	1140, 2209, 2636
SaqAI	TTAA	3 cut(s)	960, 1742, 2627
SatI	GCNGC	8 cut(s)	5, 700, 750, 956, 1034, 1325, 1427, 3038
Sau96I	GGNCC	9 cut(s)	6, 195, 335, 1202, 1346, 1418, 1562, 1850, 2422
ScaI	AGTACT	1 cut(s)	593
SduI	GDGCHC	8 cut(s)	426, 554, 866, 1023, 1135, 1154, 1916, 2561
SfaNI	GCATC	4 cut(s)	535, 711, 736, 1577
SfcI	CTRYAG	2 cut(s)	1031, 2653
SfoI	GGCGCC	1 cut(s)	988
Sfr274I	CTCGAG	1 cut(s)	587
SfuI	TTCGAA	2 cut(s)	1115, 1249
SinI	GGWCC	5 cut(s)	335, 1202, 1346, 1562, 1850
SlaI	CTCGAG	1 cut(s)	587
SmiMI	CAYNNNNRTG	4 cut(s)	479, 531, 2214, 2469
SmlI	CTYRAG	5 cut(s)	125, 587, 659, 1314, 2093
SmoI	CTYRAG	5 cut(s)	125, 587, 659, 1314, 2093
SseBI	AGGCCT	1 cut(s)	1290
SspDI	GGCGCC	1 cut(s)	986
SspMI	CTAG	2 cut(s)	1517, 2154
SstI	GAGCTC	4 cut(s)	426, 1023, 1135, 1916
StuI	AGGCCT	1 cut(s)	1290
StyI	CCWWGG	2 cut(s)	633, 885
TaaI	ACNGT	7 cut(s)	71, 758, 1346, 2071, 2261, 2447, 2959
TaiI	ACGT	9 cut(s)	209, 228, 399, 413, 854, 2564, 2652, 2832, 2841
TaqII	GACCGA	2 cut(s)	1190, 1373
TatI	WGTACW	3 cut(s)	591, 2136, 2322
TauI	GCSGC	5 cut(s)	7, 702, 752, 1429, 3040
Tru1I	TTAA	3 cut(s)	960, 1742, 2627
Tru9I	TTAA	3 cut(s)	960, 1742, 2627
TscAI	CASTG	8 cut(s)	191, 1060, 1242, 1453, 1927, 2074, 2741, 2874
TseI	GCWGC	3 cut(s)	955, 1033, 1324
TspDTI	ATGAA	2 cut(s)	991, 2345
TspGWI	ACGGA	1 cut(s)	434
TspRI	CASTG	8 cut(s)	191, 1060, 1242, 1453, 1927, 2074, 2741, 2874
Tth111I	GACNNNGTC	2 cut(s)	2259, 2729
Van91I	CCANNNNNTGG	3 cut(s)	1702, 2034, 2059
VpaK11BI	GGWCC	5 cut(s)	335, 1202, 1346, 1562, 1850
XagI	CCTNNNNNAGG	1 cut(s)	2816
XapI	RAATTY	3 cut(s)	2250, 2708, 2901
XceI	RCATGY	2 cut(s)	2329, 2575
XcmI	CCANNNNNNNNNTGG	1 cut(s)	94
XhoI	CTCGAG	1 cut(s)	587
XmiI	GTMKAC	4 cut(s)	73, 294, 1104, 2724
XmnI	GAANNNNTTC	3 cut(s)	1049, 1481, 2895
XspI	CTAG	2 cut(s)	1517, 2154
ZraI	GACGTC	2 cut(s)	852, 2650
ZrmI	AGTACT	1 cut(s)	593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.