Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0004655

Physical Location & Seq

Genomic Coordinates Reverse (-)

12011305 .. 12016568

Gene Structure 5264 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g19830.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGCCGGCCCTCGGAATTCTAGGGTTTCAGGGGCTCCTGTTCGGTGTCGTTTTGGCGTCCTTCTTTGTGATAAGGCACAAGTGGAGGAATGCGGTGGCGAAGAAGGAGGAGATCATGAGGCTTGTGGCTATGGCTTCCCAGGAGGCCGCAATGGCCGAGTTTCAGTCCACCACGGCTCTTTATGATTCTTCTGCTGCTGCTGCTGCTCCGGTGCCGGTGACCGGTGCGTTTCACTGTGCTGTTTGTTATTCGCAGACTACTATGCGGTGCTCCAAATGCAAGAGTGTTAGATACTGTTCTGGGAAGTGTCAAATCATTCACTGGAGACAAGGTCACAAGGACGAATGCCAACCTTTGGGGGTCCAACACATTAGTGACTTAGATGGGGAAGCGGCATTTCATCATGGTGGAATAGGTGCACGTGCCAGTTCGACATCGCCGAGTACTGTGTCATGGGATGGTTTCTCTTCATCTGGTACTGGAGCTGACACCCCTTCTGGTGAGATTGTTGACAGAGCAGTGAAACCTCTTTTTGATGGTCCTGCCCCTGATCTACTTGGAAATATGTCCGAGTATGCTAATTTGGTCAATTGTCAAGATAACTTTTCGCGTGCAAATAAGTTAGTTAAGATGAAATCCAGTCATAGTGATAAAGAAGTAGATTCCAAATCAAAATTGGCCAAAGCTAAGATAGACATGTCTGCTGATGCTCAACCTGCAAATTTTGTTGGTAAAAAGCAAACTAGAAGGGGTACTTCAATAGAAAAGGTAGTTACTGATGCCGCCAAGTCCAAGAGCTTGTCAACTAGTAACTGGGAAGATGAGCGTAAAGAAGGACGTTTATCATATAGTGCTTCTAGTGGTCGGCTATCTTCAGCCACTGGAGAGTTACTGGATTCCAGCTTTAGATCTGAAAAAGTTGACAGTTGTCATGCCTTGCCTGCCAAAATTGGTAGTATCCCAAGCTTGCCGCAAAATGCTTGTAATGGTTTAAAGACATCCATGAAGAAAGTTGTGCAGCAGTTTAAATCCTCAAAACAGCCGAAATCCAATCTCTCCGGTCCTGAAAATGAGATTGCTGGAAAGTTCAAGGTAATTTTTCCGTATGAGCTGTTTGTGAAACTGTACTCTTACAACAATGTGGATCTTTGCCCATTTGGCCTGACAAATTGTGGGAACAGCTGTTATGCTAATGCTGTGCTCCAGTGTTTAGCATTTACTCAGCCTCTTACTTCGTATCTTCTTCAAGGACTCCATTCTAGAGCATGTCAAAAAAAGGACTGGTGCTTTATATGTGAATTTGAAATTCTGCTCCAGAAGGCAAGAGAAGGGAAGTCTTCACTGTCCCCGATTAGGATCTTATCGAAAATACATAAAATTGGAAGCCATCTTGGTCATGGGAAGGAAGAGGATGCTCATGAATTTTTGAGGTATGCGGTTGATACCATGCAATATGTTTGCCTCAAGGAAGCTGGGGCTATTGGTCCTTTGGCAGAACAAACAACTCTAGTTGGCATGACCTTTGGAGGTCACCTTCGATCCAAGATAAAGTGCATGAAGTGCCTTGGGAAAACTGAACAATTTGAGCGGATGATGGATCTTACTGTCGAAATTGATGGGGCAATTGGAACTCTGGAAGAGGCTCTTGCACAATTTACTGCTACTGAAACTTTGGATGGAGATAATAGGTTCCATTGTAACAGGTGTAAATCTTATGAGAAAGCCAGAAAGAAACTTACAATTCTAGAGGCACCAAATATTCTTACAATAGTGTTGAAGCGCTTTCAGTCTCGGAACTTTGAGAAGCTAGATAAGTCGGTGCGTTTTCCAGAGGTTCTCAACTTGTCACCATACATGGATAGAAGTGATAAATCTCCTTTGTACAATCTTTATGCTGTGGTTGTTCACCTGGATATTATGAATGCTGCATATTCAGGCCATTATATATGCTATGTAAAGAATAGTCGAGGGAACTGGTTCAAGATTGATGACAGCTCGGTTGAACCTGTAGAATTAAAGAGGGTTTTATCTGAAGGCGCGTACATGCTTCTTTATGCAAGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

689

Amino Acids

75.87

Weight (kDa)

8.9

Isoelectric Point (pI)

44.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	79 - 116	1.2e-08	MYND finger
UCH	PF00443	386 - 685	1e-55	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	387 - 667	9.6e-21	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65450 AT5G65450
fragaria_vesca	FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830
malus_domestica	MD01G1038200.v1.1
prunus_persica	Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1
pyrus_communis	pycom01g06620
rosa_chinensis	RchiOBHm_Chr2g0111521
rosa_laevigata	RLG00000017896
rosa_multiflora	Rmu_co8461347.1_g000001 Rmu_sc0005791.1_g000010
rosa_roxburghii	Rroxscaffold_2G00132250
rosa_rugosa	Rorug02G0174700 Rorug02G0174800 Rorug02G0174900
rosa_samantha	Rh2AG227500 Rh2BG239400 Rh2CG231100 Rh2DG235600
rosa_wichuraiana	Rw2G017570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	724
AccB1I	GGYRCC	2 cut(s)	211, 1750
AccB7I	CCANNNNNTGG	1 cut(s)	355
AccBSI	CCGCTC	1 cut(s)	1588
AccII	CGCG	2 cut(s)	610, 2039
AciI	CCGC	8 cut(s)	92, 147, 265, 392, 783, 971, 1436, 1588
AclWI	GGATC	4 cut(s)	1152, 1364, 1533, 1605
AcoI	YGGCCR	2 cut(s)	153, 678
AcsI	RAATTY	5 cut(s)	15, 721, 1298, 1305, 1421
AcuI	CTGAAG	2 cut(s)	858, 2052
AcvI	CACGTG	1 cut(s)	422
AcyI	GRCGYC	1 cut(s)	56
AfaI	GTAC	6 cut(s)	445, 478, 754, 1127, 1883, 2042
AfeI	AGCGCT	1 cut(s)	1781
AfiI	CCNNNNNNNGG	4 cut(s)	11, 221, 355, 1353
AflIII	ACRYGT	1 cut(s)	696
AgeI	ACCGGT	1 cut(s)	221
AgsI	TTSAA	7 cut(s)	759, 1090, 1247, 1304, 1777, 1981, 2003
AhlI	ACTAGT	1 cut(s)	806
AjnI	CCWGG	2 cut(s)	138, 1908
AleI	CACNNNNGTG	1 cut(s)	372
Alw21I	GWGCWC	3 cut(s)	272, 421, 1203
Alw26I	GTCTC	2 cut(s)	319, 1794
Alw44I	GTGCAC	1 cut(s)	417
AlwI	GGATC	4 cut(s)	1152, 1364, 1533, 1605
AlwNI	CAGNNNCTG	1 cut(s)	881
Aor51HI	AGCGCT	1 cut(s)	1781
AoxI	GGCC	6 cut(s)	6, 144, 153, 678, 1159, 1936
ApaLI	GTGCAC	1 cut(s)	417
ApeKI	GCWGC	6 cut(s)	194, 197, 200, 203, 1018, 1925
ApoI	RAATTY	5 cut(s)	15, 721, 1298, 1305, 1421
AsiGI	ACCGGT	1 cut(s)	221
Asp700I	GAANNNNTTC	1 cut(s)	1976
AspLEI	GCGC	2 cut(s)	1782, 2039
AspS9I	GGNCC	5 cut(s)	7, 361, 539, 1061, 1484
AsuHPI	GGTGA	5 cut(s)	229, 512, 1523, 1839, 1898
AvaII	GGWCC	4 cut(s)	361, 539, 1061, 1484
BaeGI	GKGCMC	1 cut(s)	421
BalI	TGGCCA	1 cut(s)	680
BanI	GGYRCC	2 cut(s)	211, 1750
BanII	GRGCYC	1 cut(s)	36
BbrPI	CACGTG	1 cut(s)	422
BbsI	GAAGAC	1 cut(s)	1329
Bbv12I	GWGCWC	3 cut(s)	272, 421, 1203
BbvI	GCAGC	6 cut(s)	181, 184, 187, 190, 1030, 1912
BccI	CCATC	7 cut(s)	377, 452, 530, 1395, 1588, 1610, 1670
BceAI	ACGGC	1 cut(s)	189
BciT130I	CCWGG	2 cut(s)	140, 1910
BciVI	GTATCC	1 cut(s)	968
BcoDI	GTCTC	2 cut(s)	319, 1794
BcuI	ACTAGT	1 cut(s)	806
BfaI	CTAG	8 cut(s)	20, 744, 807, 858, 1260, 1508, 1745, 1808
BfmI	CTRYAG	1 cut(s)	2007
BfoI	RGCGCY	1 cut(s)	1783
BfuAI	ACCTGC	1 cut(s)	724
BfuI	GTATCC	1 cut(s)	968
BglI	GCCNNNNNGGC	2 cut(s)	152, 1158
BglII	AGATCT	1 cut(s)	908
BmcAI	AGTACT	1 cut(s)	445
Bme1390I	CCNGG	2 cut(s)	140, 1910
Bme18I	GGWCC	4 cut(s)	361, 539, 1061, 1484
BmgT120I	GGNCC	5 cut(s)	7, 361, 539, 1061, 1484
BmiI	GGNNCC	5 cut(s)	35, 213, 362, 1691, 1752
BmrFI	CCNGG	2 cut(s)	140, 1910
BmrI	ACTGGG	1 cut(s)	823
BmsI	GCATC	3 cut(s)	697, 769, 1402
BmuI	ACTGGG	1 cut(s)	823
BoxI	GACNNNNGTC	1 cut(s)	927
BpiI	GAAGAC	1 cut(s)	1329
BpmI	CTGGAG	5 cut(s)	343, 501, 903, 1187, 1298
BpuEI	CTTGAG	1 cut(s)	1448
BsaAI	YACGTR	1 cut(s)	422
BsaBI	GATNNNNATC	1 cut(s)	1355
BsaHI	GRCGYC	1 cut(s)	56
BsaJI	CCNNGG	4 cut(s)	10, 138, 171, 1564
BsaWI	WCCGGW	3 cut(s)	208, 221, 1058
BsaXI	ACNNNNNCTCC	2 cut(s)	316, 346
Bsc4I	CCNNNNNNNGG	4 cut(s)	11, 221, 355, 1353
Bse118I	RCCGGY	3 cut(s)	4, 214, 221
Bse3DI	GCAATG	1 cut(s)	156
Bse8I	GATNNNNATC	1 cut(s)	1355
BseBI	CCWGG	2 cut(s)	140, 1910
BseDI	CCNNGG	4 cut(s)	10, 138, 171, 1564
BseGI	GGATG	5 cut(s)	463, 998, 1417, 1596, 1681
BseJI	GATNNNNATC	1 cut(s)	1355
BseLI	CCNNNNNNNGG	4 cut(s)	11, 221, 355, 1353
BseMI	GCAATG	1 cut(s)	156
BseMII	CTCAG	1 cut(s)	1235
BseRI	GAGGAG	1 cut(s)	122
BseSI	GKGCMC	1 cut(s)	421
BseXI	GCAGC	6 cut(s)	181, 184, 187, 190, 1030, 1912
BseYI	CCCAGC	1 cut(s)	1472
BsgI	GTGCAG	1 cut(s)	1037
Bsh1236I	CGCG	2 cut(s)	610, 2039
BshFI	GGCC	6 cut(s)	8, 146, 155, 680, 1161, 1938
BshNI	GGYRCC	2 cut(s)	211, 1750
BshTI	ACCGGT	1 cut(s)	221
BsiHKAI	GWGCWC	3 cut(s)	272, 421, 1203
BsiSI	CCGG	5 cut(s)	5, 209, 215, 222, 1059
BslFI	GGGAC	1 cut(s)	1330
BslI	CCNNNNNNNGG	4 cut(s)	11, 221, 355, 1353
BsmAI	GTCTC	2 cut(s)	319, 1794
BsmFI	GGGAC	1 cut(s)	1330
BsmI	GAATGC	3 cut(s)	94, 350, 1927
BsnI	GGCC	6 cut(s)	8, 146, 155, 680, 1161, 1938
Bsp1286I	GDGCHC	4 cut(s)	36, 272, 421, 1203
Bsp1407I	TGTACA	1 cut(s)	1881
Bsp143I	GATC	7 cut(s)	111, 550, 908, 1144, 1356, 1538, 1597
BspACI	CCGC	8 cut(s)	92, 147, 265, 392, 783, 971, 1436, 1588
BspANI	GGCC	6 cut(s)	8, 146, 155, 680, 1161, 1938
BspCNI	CTCAG	1 cut(s)	1234
BspFNI	CGCG	2 cut(s)	610, 2039
BspHI	TCATGA	2 cut(s)	114, 1417
BspLI	GGNNCC	5 cut(s)	35, 213, 362, 1691, 1752
BspMI	ACCTGC	1 cut(s)	724
BspPI	GGATC	4 cut(s)	1152, 1364, 1533, 1605
BspT107I	GGYRCC	2 cut(s)	211, 1750
BsrBI	CCGCTC	1 cut(s)	1588
BsrDI	GCAATG	1 cut(s)	156
BsrFI	RCCGGY	3 cut(s)	4, 214, 221
BsrGI	TGTACA	1 cut(s)	1881
BssAI	RCCGGY	3 cut(s)	4, 214, 221
BssECI	CCNNGG	4 cut(s)	10, 138, 171, 1564
BssMI	GATC	7 cut(s)	111, 550, 908, 1144, 1356, 1538, 1597
BssNI	GRCGYC	1 cut(s)	56
BssT1I	CCWWGG	1 cut(s)	1564
Bst2UI	CCWGG	2 cut(s)	140, 1910
Bst4CI	ACNGT	7 cut(s)	236, 296, 448, 926, 1125, 1344, 1606
Bst6I	CTCTTC	3 cut(s)	472, 1401, 1632
BstACI	GRCGYC	1 cut(s)	56
BstAPI	GCANNNNNTGC	1 cut(s)	1560
BstAUI	TGTACA	1 cut(s)	1881
BstBAI	YACGTR	1 cut(s)	422
BstC8I	GCNNGC	4 cut(s)	6, 612, 942, 968
BstDEI	CTNAG	3 cut(s)	379, 687, 1221
BstDSI	CCRYGG	1 cut(s)	171
BstEII	GGTNACC	2 cut(s)	217, 1529
BstF5I	GGATG	5 cut(s)	463, 998, 1417, 1596, 1681
BstFNI	CGCG	2 cut(s)	610, 2039
BstH2I	RGCGCY	1 cut(s)	1783
BstHHI	GCGC	2 cut(s)	1782, 2039
BstKTI	GATC	7 cut(s)	114, 553, 911, 1147, 1359, 1541, 1600
BstMAI	GTCTC	2 cut(s)	319, 1794
BstMBI	GATC	7 cut(s)	111, 550, 908, 1144, 1356, 1538, 1597
BstMWI	GCNNNNNNNGC	8 cut(s)	152, 200, 203, 276, 716, 941, 1158, 1560
BstNI	CCWGG	2 cut(s)	140, 1910
BstNSI	RCATGY	3 cut(s)	700, 1269, 2047
BstPAI	GACNNNNGTC	1 cut(s)	927
BstPI	GGTNACC	2 cut(s)	217, 1529
BstSCI	CCNGG	2 cut(s)	138, 1908
BstSFI	CTRYAG	1 cut(s)	2007
BstSLI	GKGCMC	1 cut(s)	421
BstUI	CGCG	2 cut(s)	610, 2039
BstV1I	GCAGC	6 cut(s)	181, 184, 187, 190, 1030, 1912
BstV2I	GAAGAC	1 cut(s)	1329
BstX2I	RGATCY	4 cut(s)	908, 1144, 1356, 1597
BstYI	RGATCY	4 cut(s)	908, 1144, 1356, 1597
BsuI	GTATCC	1 cut(s)	968
BsuRI	GGCC	6 cut(s)	8, 146, 155, 680, 1161, 1938
BtgI	CCRYGG	1 cut(s)	171
BtgZI	GCGATG	1 cut(s)	420
BtsCI	GGATG	5 cut(s)	463, 998, 1417, 1596, 1681
BtsI	GCAGTG	1 cut(s)	525
BtsIMutI	CAGTG	6 cut(s)	232, 319, 525, 879, 1211, 1340
BveI	ACCTGC	1 cut(s)	724
Cac8I	GCNNGC	4 cut(s)	6, 612, 942, 968
CaiI	CAGNNNCTG	1 cut(s)	881
CciI	TCATGA	2 cut(s)	114, 1417
CfoI	GCGC	2 cut(s)	1782, 2039
Cfr10I	RCCGGY	3 cut(s)	4, 214, 221
Cfr13I	GGNCC	5 cut(s)	7, 361, 539, 1061, 1484
CseI	GACGC	1 cut(s)	45
Csp6I	GTAC	6 cut(s)	444, 477, 753, 1126, 1882, 2041
CspAI	ACCGGT	1 cut(s)	221
CviQI	GTAC	6 cut(s)	444, 477, 753, 1126, 1882, 2041
DdeI	CTNAG	3 cut(s)	379, 687, 1221
DpnI	GATC	7 cut(s)	113, 552, 910, 1146, 1358, 1540, 1599
DpnII	GATC	7 cut(s)	111, 550, 908, 1144, 1356, 1538, 1597
DraI	TTTAAA	2 cut(s)	993, 1027
EaeI	YGGCCR	2 cut(s)	153, 678
Eam1104I	CTCTTC	3 cut(s)	472, 1401, 1632
EarI	CTCTTC	3 cut(s)	472, 1401, 1632
Eco130I	CCWWGG	1 cut(s)	1564
Eco24I	GRGCYC	1 cut(s)	36
Eco47I	GGWCC	4 cut(s)	361, 539, 1061, 1484
Eco47III	AGCGCT	1 cut(s)	1781
Eco57I	CTGAAG	2 cut(s)	858, 2052
Eco72I	CACGTG	1 cut(s)	422
Eco91I	GGTNACC	2 cut(s)	217, 1529
EcoO65I	GGTNACC	2 cut(s)	217, 1529
EcoRI	GAATTC	1 cut(s)	15
EcoRII	CCWGG	2 cut(s)	138, 1908
EcoT14I	CCWWGG	1 cut(s)	1564
EcoT38I	GRGCYC	1 cut(s)	36
ErhI	CCWWGG	1 cut(s)	1564
FalI	AAGNNNNNCTT	4 cut(s)	739, 771, 1629, 1661
FaqI	GGGAC	1 cut(s)	1330
FokI	GGATG	5 cut(s)	470, 985, 1424, 1603, 1688
FriOI	GRGCYC	1 cut(s)	36
FspBI	CTAG	8 cut(s)	20, 744, 807, 858, 1260, 1508, 1745, 1808
GlaI	GCGC	2 cut(s)	1781, 2038
GsaI	CCCAGC	1 cut(s)	1476
GsuI	CTGGAG	5 cut(s)	343, 501, 903, 1187, 1298
HaeII	RGCGCY	1 cut(s)	1783
HaeIII	GGCC	6 cut(s)	8, 146, 155, 680, 1161, 1938
HapII	CCGG	5 cut(s)	5, 209, 215, 222, 1059
HgaI	GACGC	1 cut(s)	45
HhaI	GCGC	2 cut(s)	1782, 2039
Hin1I	GRCGYC	1 cut(s)	56
Hin6I	GCGC	2 cut(s)	1780, 2037
HinP1I	GCGC	2 cut(s)	1780, 2037
HincII	GTYRAC	3 cut(s)	511, 804, 922
HindII	GTYRAC	3 cut(s)	511, 804, 922
HindIII	AAGCTT	1 cut(s)	964
HinfI	GANTC	4 cut(s)	185, 662, 896, 1251
HpaII	CCGG	5 cut(s)	5, 209, 215, 222, 1059
HphI	GGTGA	5 cut(s)	229, 512, 1523, 1839, 1898
Hpy166II	GTNNAC	6 cut(s)	168, 419, 511, 804, 922, 1906
Hpy188I	TCNGA	5 cut(s)	14, 571, 913, 1794, 2032
Hpy8I	GTNNAC	6 cut(s)	168, 419, 511, 804, 922, 1906
HpyCH4III	ACNGT	7 cut(s)	236, 296, 448, 926, 1125, 1344, 1606
HpyCH4IV	ACGT	2 cut(s)	421, 838
HpyF10VI	GCNNNNNNNGC	8 cut(s)	152, 200, 203, 276, 716, 941, 1158, 1560
HpyF3I	CTNAG	3 cut(s)	379, 687, 1221
HpySE526I	ACGT	2 cut(s)	421, 838
Hsp92I	GRCGYC	1 cut(s)	56
HspAI	GCGC	2 cut(s)	1780, 2037
KroI	GCCGGC	1 cut(s)	4
KroNI	GCCGGC	1 cut(s)	6
Kzo9I	GATC	7 cut(s)	111, 550, 908, 1144, 1356, 1538, 1597
LmnI	GCTCC	6 cut(s)	39, 211, 275, 482, 1206, 1317
Lsp1109I	GCAGC	6 cut(s)	181, 184, 187, 190, 1030, 1912
LweI	GCATC	3 cut(s)	697, 769, 1402
MaeI	CTAG	8 cut(s)	20, 744, 807, 858, 1260, 1508, 1745, 1808
MaeII	ACGT	2 cut(s)	421, 838
MaeIII	GTNAC	9 cut(s)	217, 332, 374, 772, 809, 888, 1529, 1697, 1845
MalI	GATC	7 cut(s)	113, 552, 910, 1146, 1358, 1540, 1599
MbiI	CCGCTC	1 cut(s)	1588
MboI	GATC	7 cut(s)	111, 550, 908, 1144, 1356, 1538, 1597
MfeI	CAATTG	2 cut(s)	589, 1623
MflI	RGATCY	4 cut(s)	908, 1144, 1356, 1597
MhlI	GDGCHC	4 cut(s)	36, 272, 421, 1203
MlsI	TGGCCA	1 cut(s)	680
MluNI	TGGCCA	1 cut(s)	680
MlyI	GAGTC	1 cut(s)	1245
MmeI	TCCRAC	1 cut(s)	388
Mox20I	TGGCCA	1 cut(s)	680
MroNI	GCCGGC	1 cut(s)	4
MroXI	GAANNNNTTC	1 cut(s)	1976
MscI	TGGCCA	1 cut(s)	680
MseI	TTAA	4 cut(s)	627, 992, 1026, 2015
MslI	CAYNNNNRTG	2 cut(s)	372, 405
Msp20I	TGGCCA	1 cut(s)	680
MspA1I	CMGCKG	1 cut(s)	1182
MspI	CCGG	5 cut(s)	5, 209, 215, 222, 1059
MspR9I	CCNGG	2 cut(s)	140, 1910
MunI	CAATTG	2 cut(s)	589, 1623
Mva1269I	GAATGC	3 cut(s)	94, 350, 1927
MvaI	CCWGG	2 cut(s)	140, 1910
MvnI	CGCG	2 cut(s)	610, 2039
MwoI	GCNNNNNNNGC	8 cut(s)	152, 200, 203, 276, 716, 941, 1158, 1560
NaeI	GCCGGC	1 cut(s)	6
NdeII	GATC	7 cut(s)	111, 550, 908, 1144, 1356, 1538, 1597
NgoMIV	GCCGGC	1 cut(s)	4
NlaIV	GGNNCC	5 cut(s)	35, 213, 362, 1691, 1752
NmeAIII	GCCGAG	2 cut(s)	181, 465
NmuCI	GTSAC	5 cut(s)	217, 332, 374, 1529, 1845
NspI	RCATGY	3 cut(s)	700, 1269, 2047
OliI	CACNNNNGTG	1 cut(s)	372
PagI	TCATGA	2 cut(s)	114, 1417
PciI	ACATGT	1 cut(s)	696
PcsI	WCGNNNNNNNCGW	1 cut(s)	437
PctI	GAATGC	3 cut(s)	94, 350, 1927
PdiI	GCCGGC	1 cut(s)	6
PdmI	GAANNNNTTC	1 cut(s)	1976
PfeI	GAWTC	3 cut(s)	185, 662, 896
PflFI	GACNNNGTC	1 cut(s)	330
PflMI	CCANNNNNTGG	1 cut(s)	355
PinAI	ACCGGT	1 cut(s)	221
PleI	GAGTC	1 cut(s)	1245
PmaCI	CACGTG	1 cut(s)	422
PmlI	CACGTG	1 cut(s)	422
PpsI	GAGTC	1 cut(s)	1245
Ppu21I	YACGTR	1 cut(s)	422
PscI	ACATGT	1 cut(s)	696
PshAI	GACNNNNGTC	1 cut(s)	927
Psp6I	CCWGG	2 cut(s)	138, 1908
PspCI	CACGTG	1 cut(s)	422
PspEI	GGTNACC	2 cut(s)	217, 1529
PspFI	CCCAGC	1 cut(s)	1472
PspGI	CCWGG	2 cut(s)	138, 1908
PspN4I	GGNNCC	5 cut(s)	35, 213, 362, 1691, 1752
PspPI	GGNCC	5 cut(s)	7, 361, 539, 1061, 1484
PstNI	CAGNNNCTG	1 cut(s)	881
PsuI	RGATCY	4 cut(s)	908, 1144, 1356, 1597
PsyI	GACNNNGTC	1 cut(s)	330
PvuII	CAGCTG	1 cut(s)	1182
RsaI	GTAC	6 cut(s)	445, 478, 754, 1127, 1883, 2042
RsaNI	GTAC	6 cut(s)	444, 477, 753, 1126, 1882, 2041
RseI	CAYNNNNRTG	2 cut(s)	372, 405
SaqAI	TTAA	4 cut(s)	627, 992, 1026, 2015
Sau3AI	GATC	7 cut(s)	111, 550, 908, 1144, 1356, 1538, 1597
Sau96I	GGNCC	5 cut(s)	7, 361, 539, 1061, 1484
ScaI	AGTACT	1 cut(s)	445
SchI	GAGTC	1 cut(s)	1245
ScrFI	CCNGG	2 cut(s)	140, 1910
SduI	GDGCHC	4 cut(s)	36, 272, 421, 1203
SfaNI	GCATC	3 cut(s)	697, 769, 1402
SfcI	CTRYAG	1 cut(s)	2007
SfiI	GGCCNNNNNGGCC	1 cut(s)	152
SinI	GGWCC	4 cut(s)	361, 539, 1061, 1484
SmiMI	CAYNNNNRTG	2 cut(s)	372, 405
SmlI	CTYRAG	1 cut(s)	1463
SmoI	CTYRAG	1 cut(s)	1463
SpeI	ACTAGT	1 cut(s)	806
SsiI	CCGC	8 cut(s)	92, 147, 265, 392, 783, 971, 1436, 1588
SspI	AATATT	1 cut(s)	1759
SspMI	CTAG	8 cut(s)	20, 744, 807, 858, 1260, 1508, 1745, 1808
StyD4I	CCNGG	2 cut(s)	138, 1908
StyI	CCWWGG	1 cut(s)	1564
TaaI	ACNGT	7 cut(s)	236, 296, 448, 926, 1125, 1344, 1606
TaiI	ACGT	2 cut(s)	424, 841
TaqI	TCGA	5 cut(s)	431, 1364, 1537, 1608, 1966
TatI	WGTACW	3 cut(s)	443, 1125, 1881
TauI	GCSGC	4 cut(s)	149, 395, 785, 973
TfiI	GAWTC	3 cut(s)	185, 662, 896
Tru1I	TTAA	4 cut(s)	627, 992, 1026, 2015
Tru9I	TTAA	4 cut(s)	627, 992, 1026, 2015
TscAI	CASTG	6 cut(s)	239, 326, 525, 886, 1211, 1347
TseFI	GTSAC	5 cut(s)	217, 332, 374, 1529, 1845
TseI	GCWGC	6 cut(s)	194, 197, 200, 203, 1018, 1925
Tsp45I	GTSAC	5 cut(s)	217, 332, 374, 1529, 1845
TspDTI	ATGAA	7 cut(s)	389, 459, 647, 1019, 1434, 1571, 1934
TspGWI	ACGGA	1 cut(s)	1092
TspRI	CASTG	6 cut(s)	239, 326, 525, 886, 1211, 1347
Tth111I	GACNNNGTC	1 cut(s)	330
Van91I	CCANNNNNTGG	1 cut(s)	355
VneI	GTGCAC	1 cut(s)	417
VpaK11BI	GGWCC	4 cut(s)	361, 539, 1061, 1484
XapI	RAATTY	5 cut(s)	15, 721, 1298, 1305, 1421
XbaI	TCTAGA	2 cut(s)	1259, 1744
XceI	RCATGY	3 cut(s)	700, 1269, 2047
XcmI	CCANNNNNNNNNTGG	2 cut(s)	673, 1394
XmnI	GAANNNNTTC	1 cut(s)	1976
XspI	CTAG	8 cut(s)	20, 744, 807, 858, 1260, 1508, 1745, 1808
ZrmI	AGTACT	1 cut(s)	445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.